View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1430_low_11 (Length: 394)

Name: NF1430_low_11
Description: NF1430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1430_low_11
NF1430_low_11
[»] chr4 (22 HSPs)
chr4 (108-378)||(365798-366069)
chr4 (1-108)||(41374166-41374273)
chr4 (1-110)||(13595274-13595383)
chr4 (1-110)||(37355281-37355390)
chr4 (1-110)||(37367255-37367364)
chr4 (1-108)||(8105047-8105154)
chr4 (1-108)||(17458086-17458193)
chr4 (1-108)||(55461720-55461827)
chr4 (1-111)||(16406495-16406605)
chr4 (121-378)||(530153-530405)
chr4 (1-110)||(27591542-27591651)
chr4 (1-108)||(30239394-30239501)
chr4 (1-108)||(36753702-36753808)
chr4 (1-79)||(7781495-7781573)
chr4 (1-79)||(30210551-30210629)
chr4 (2-65)||(5659434-5659497)
chr4 (6-61)||(666582-666637)
chr4 (2-73)||(13570571-13570642)
chr4 (2-65)||(23542518-23542581)
chr4 (21-73)||(52182173-52182225)
chr4 (21-68)||(54300607-54300654)
chr4 (12-73)||(49358610-49358671)
[»] chr3 (18 HSPs)
chr3 (134-378)||(520487-520731)
chr3 (1-108)||(27500902-27501009)
chr3 (1-109)||(6037450-6037558)
chr3 (1-109)||(9575940-9576048)
chr3 (1-113)||(24180242-24180354)
chr3 (1-108)||(25894393-25894500)
chr3 (1-108)||(4310427-4310534)
chr3 (1-108)||(9569468-9569575)
chr3 (1-90)||(23069657-23069746)
chr3 (1-110)||(47442157-47442265)
chr3 (1-108)||(20649853-20649959)
chr3 (1-79)||(32747537-32747615)
chr3 (4-108)||(43932800-43932903)
chr3 (4-65)||(10940165-10940226)
chr3 (1-108)||(43996333-43996439)
chr3 (6-67)||(4507595-4507656)
chr3 (19-67)||(4591985-4592033)
chr3 (21-73)||(27902154-27902206)
[»] chr2 (24 HSPs)
chr2 (1-113)||(13900903-13901015)
chr2 (1-109)||(34840190-34840298)
chr2 (1-108)||(12951978-12952085)
chr2 (1-108)||(34833747-34833854)
chr2 (1-108)||(43269028-43269135)
chr2 (1-109)||(2158791-2158899)
chr2 (1-108)||(2165207-2165314)
chr2 (1-108)||(45013163-45013270)
chr2 (1-108)||(15853716-15853823)
chr2 (1-108)||(29486024-29486131)
chr2 (1-108)||(39505291-39505398)
chr2 (1-109)||(36781130-36781238)
chr2 (1-109)||(42930328-42930436)
chr2 (1-79)||(2020422-2020500)
chr2 (1-79)||(16816313-16816391)
chr2 (1-79)||(16855470-16855548)
chr2 (1-79)||(21340915-21340993)
chr2 (1-79)||(21066902-21066980)
chr2 (9-109)||(11908847-11908946)
chr2 (6-108)||(43670914-43671015)
chr2 (8-66)||(3363402-3363460)
chr2 (21-74)||(748243-748296)
chr2 (37-76)||(22196926-22196965)
chr2 (38-77)||(22605557-22605596)
[»] chr7 (33 HSPs)
chr7 (1-110)||(8141393-8141502)
chr7 (1-109)||(6796618-6796726)
chr7 (1-109)||(36876724-36876832)
chr7 (1-113)||(48346029-48346141)
chr7 (1-109)||(48352417-48352525)
chr7 (1-108)||(1380127-1380234)
chr7 (1-108)||(1386231-1386338)
chr7 (1-108)||(2447828-2447935)
chr7 (1-108)||(3923042-3923149)
chr7 (1-110)||(9641862-9641971)
chr7 (1-109)||(8191835-8191943)
chr7 (1-109)||(14288888-14288996)
chr7 (1-108)||(5048847-5048954)
chr7 (1-108)||(8184276-8184383)
chr7 (1-108)||(26603153-26603260)
chr7 (1-108)||(6019817-6019924)
chr7 (1-109)||(21643686-21643794)
chr7 (1-104)||(23613556-23613659)
chr7 (10-108)||(14300065-14300163)
chr7 (1-79)||(15953647-15953725)
chr7 (1-79)||(19090952-19091030)
chr7 (1-110)||(39434205-39434314)
chr7 (1-109)||(15925322-15925429)
chr7 (1-108)||(22853081-22853187)
chr7 (1-108)||(37027323-37027429)
chr7 (1-79)||(1947819-1947897)
chr7 (1-79)||(33849686-33849764)
chr7 (6-108)||(48456522-48456623)
chr7 (6-110)||(41453813-41453916)
chr7 (2-73)||(9704304-9704375)
chr7 (12-109)||(28602529-28602625)
chr7 (12-67)||(10861164-10861219)
chr7 (12-67)||(21900081-21900136)
[»] chr1 (29 HSPs)
chr1 (1-110)||(39052252-39052361)
chr1 (1-110)||(42093076-42093185)
chr1 (1-109)||(39058625-39058733)
chr1 (1-109)||(45016961-45017069)
chr1 (1-108)||(6239824-6239931)
chr1 (1-110)||(45023701-45023810)
chr1 (1-108)||(28997174-28997281)
chr1 (1-108)||(29002890-29002997)
chr1 (1-108)||(43687798-43687905)
chr1 (1-108)||(44242525-44242632)
chr1 (1-109)||(35086168-35086276)
chr1 (1-108)||(4600697-4600804)
chr1 (1-79)||(1175761-1175839)
chr1 (1-79)||(32798883-32798960)
chr1 (1-79)||(41304505-41304583)
chr1 (1-79)||(23761338-23761416)
chr1 (1-108)||(1115011-1115118)
chr1 (1-109)||(31073553-31073660)
chr1 (1-79)||(26622629-26622707)
chr1 (2-74)||(11912151-11912223)
chr1 (1-108)||(9870245-9870351)
chr1 (2-79)||(23252549-23252625)
chr1 (2-110)||(44917611-44917718)
chr1 (6-67)||(47295152-47295213)
chr1 (2-61)||(21818640-21818699)
chr1 (25-110)||(31475807-31475892)
chr1 (38-74)||(7062707-7062743)
chr1 (26-72)||(13249919-13249965)
chr1 (12-61)||(28412667-28412716)
[»] scaffold0053 (3 HSPs)
scaffold0053 (1-109)||(50870-50978)
scaffold0053 (1-79)||(71606-71684)
scaffold0053 (21-79)||(65957-66015)
[»] chr8 (17 HSPs)
chr8 (1-109)||(8012254-8012362)
chr8 (1-108)||(6463511-6463618)
chr8 (1-108)||(7312527-7312634)
chr8 (1-108)||(36004419-36004526)
chr8 (1-108)||(36077145-36077252)
chr8 (1-110)||(36020681-36020790)
chr8 (1-110)||(11357157-11357266)
chr8 (1-108)||(16709617-16709724)
chr8 (1-108)||(36424613-36424720)
chr8 (1-108)||(15013652-15013758)
chr8 (1-110)||(45067394-45067502)
chr8 (1-108)||(12770038-12770142)
chr8 (25-77)||(4973083-4973135)
chr8 (6-108)||(2267352-2267453)
chr8 (6-60)||(5063025-5063079)
chr8 (6-67)||(38658327-38658388)
chr8 (19-67)||(7932911-7932959)
[»] chr6 (28 HSPs)
chr6 (1-109)||(4025595-4025703)
chr6 (1-109)||(4717474-4717582)
chr6 (1-109)||(34649980-34650088)
chr6 (1-108)||(1427358-1427465)
chr6 (1-108)||(4019170-4019277)
chr6 (1-108)||(7061450-7061557)
chr6 (1-108)||(11065079-11065186)
chr6 (1-108)||(31128235-31128342)
chr6 (1-108)||(32327428-32327535)
chr6 (1-108)||(34656431-34656538)
chr6 (1-109)||(7068635-7068743)
chr6 (1-109)||(21261518-21261626)
chr6 (1-110)||(9863707-9863816)
chr6 (1-109)||(4189099-4189207)
chr6 (1-109)||(4737261-4737369)
chr6 (1-108)||(4668279-4668386)
chr6 (1-108)||(4675126-4675233)
chr6 (1-108)||(31549046-31549153)
chr6 (1-108)||(34710505-34710612)
chr6 (1-110)||(13670769-13670878)
chr6 (1-111)||(27671278-27671387)
chr6 (8-108)||(1166338-1166437)
chr6 (6-67)||(13735126-13735187)
chr6 (6-67)||(1052362-1052423)
chr6 (6-74)||(13556251-13556319)
chr6 (28-72)||(18751353-18751397)
chr6 (38-76)||(22871523-22871561)
chr6 (21-73)||(18766857-18766909)
[»] chr5 (26 HSPs)
chr5 (1-109)||(2959040-2959148)
chr5 (1-109)||(2967509-2967617)
chr5 (1-109)||(29975139-29975247)
chr5 (1-109)||(30021395-30021503)
chr5 (1-108)||(29981642-29981749)
chr5 (1-109)||(4974735-4974843)
chr5 (1-109)||(34356200-34356308)
chr5 (1-109)||(34357991-34358099)
chr5 (1-108)||(25893531-25893638)
chr5 (1-110)||(40957560-40957669)
chr5 (1-110)||(42151987-42152095)
chr5 (1-79)||(5877386-5877464)
chr5 (1-79)||(22314996-22315074)
chr5 (1-108)||(2440045-2440151)
chr5 (1-79)||(29413643-29413721)
chr5 (1-109)||(2823421-2823527)
chr5 (6-108)||(4693181-4693282)
chr5 (14-79)||(12504724-12504790)
chr5 (2-61)||(20900483-20900542)
chr5 (28-109)||(37336431-37336512)
chr5 (26-72)||(42748266-42748312)
chr5 (19-67)||(9844550-9844598)
chr5 (12-76)||(30579161-30579225)
chr5 (1-55)||(22361130-22361182)
chr5 (37-72)||(28404007-28404042)
chr5 (19-61)||(2153100-2153142)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1-108)||(9024-9131)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-108)||(3940-4047)
[»] scaffold0536 (1 HSPs)
scaffold0536 (1-111)||(11298-11408)
[»] scaffold0510 (2 HSPs)
scaffold0510 (1-108)||(2192-2299)
scaffold0510 (1-79)||(7866-7944)
[»] scaffold0513 (1 HSPs)
scaffold0513 (1-79)||(11120-11198)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-108)||(3983-4089)
[»] scaffold0265 (1 HSPs)
scaffold0265 (2-61)||(14110-14169)
[»] scaffold0012 (1 HSPs)
scaffold0012 (6-109)||(203155-203257)
[»] scaffold1487 (1 HSPs)
scaffold1487 (21-66)||(1085-1130)


Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 108 - 378
Target Start/End: Original strand, 365798 - 366069
Alignment:
Q  108 aatggtcagtcacttctttcaaagaaagtcatgaggaggcctgcaacagactaaacaaatgccaaaaattaccttgcaaaacttaattaagccaagtctt 207  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  365798 aatggtcagtcacttctttcaaagaaagtcacgaggaggcttggaacagactagtcaaatgccaaaaattaccttgcaaaacttaattaagccaagtctt 365897  T
Q  208 caaagtgatctctacatcaagcctcaaatgaatcataacggaatacaaacacnnnnnnntggtcatttgcttgaaaaattacaaagtttcaccttgcata 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  365898 caaagtgatctctacatcaagcctcaaatgaatcataacggaatacaaacaccaaaaaatggtcatttgcttgaaaaattacaaagtttcaccttgcata 365997  T
Q  308 tttgattaaatcgagaagtggctgtgc-nnnnnnnttataactcaagagtatcatgactttatgtgtttcaa 378  Q
    |||||||||||||  |||||| |||||        |||||||||||||||||||||||||||||||||||||    
T  365998 tttgattaaatcggtaagtggttgtgcaaaaaaaattataactcaagagtatcatgactttatgtgtttcaa 366069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41374166 - 41374273
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41374166 aagggcaataatcacttatttctcagcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 41374265  T
Q  101 acttatca 108  Q
    ||||||||    
T  41374266 acttatca 41374273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13595274 - 13595383
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  13595274 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 13595373  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  13595374 acttatcaat 13595383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37355390 - 37355281
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37355390 aagggcaataatcacttatttctcggcttttccctcaataacttgtaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 37355291  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  37355290 acttatcaat 37355281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37367364 - 37367255
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37367364 aagggcaataatcacttatttctcggcttttccctcaataacttgtaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 37367265  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  37367264 acttatcaat 37367255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 8105047 - 8105154
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  8105047 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 8105146  T
Q  101 acttatca 108  Q
    ||||||||    
T  8105147 acttatca 8105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17458086 - 17458193
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  17458086 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 17458185  T
Q  101 acttatca 108  Q
    ||||||||    
T  17458186 acttatca 17458193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 55461827 - 55461720
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  55461827 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 55461728  T
Q  101 acttatca 108  Q
    ||||||||    
T  55461727 acttatca 55461720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16406495 - 16406605
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| |    
T  16406495 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacatctttctagc 16406594  T
Q  101 acttatcaatg 111  Q
    |||||||||||    
T  16406595 acttatcaatg 16406605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 121 - 378
Target Start/End: Complemental strand, 530405 - 530153
Alignment:
Q  121 ttctttcaaagaaagtcatgaggaggcctgcaacagactaaacaaatgccaaaaattaccttgcaaaacttaattaagccaagtcttcaaagtgatctct 220  Q
    |||||||||| |||| || ||||||||||||||||||||| |||||  |||||||||||||||||||||      ||||  |||||| |||| |||||||    
T  530405 ttctttcaaataaagacaggaggaggcctgcaacagactagacaaaaaccaaaaattaccttgcaaaac------aagcttagtctttaaagcgatctct 530312  T
Q  221 acatcaagcctcaaatgaatcataacggaatacaaacac-nnnnnnntggtcatttgcttgaaaaattacaaagtttcaccttgcatatttgattaaatc 319  Q
    ||||||||||||||||||||||| || ||||||||||||        ||||||| | |||||||||| ||||||||||| |||||||||||||| ||||     
T  530311 acatcaagcctcaaatgaatcatcacagaatacaaacacaataaaaatggtcatattcttgaaaaataacaaagtttcatcttgcatatttgatgaaatt 530212  T
Q  320 gagaagtggctgtgcnnnnnnnttataactcaagagtatcatgactttatgtgtttcaa 378  Q
    |  | | || |||||       ||||||||||| |||||||||||||||||||||||||    
T  530211 ggtatgcggttgtgcaaaaaaattataactcaacagtatcatgactttatgtgtttcaa 530153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27591542 - 27591651
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  27591542 aagggcaataataacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 27591641  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  27591642 acttatcaat 27591651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30239394 - 30239501
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||| |||||||||||| |    
T  30239394 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatataatataaaatacaactttctagc 30239493  T
Q  101 acttatca 108  Q
    ||||||||    
T  30239494 acttatca 30239501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36753808 - 36753702
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    ||||| ||| ||||| |||||||||||| |    
T  36753808 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgctatgaatat-tcatttaaaatacaactttctagc 36753710  T
Q  101 acttatca 108  Q
    ||||||||    
T  36753709 acttatca 36753702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7781495 - 7781573
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  7781495 aagggaaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtacctaaaatatatca 7781573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30210629 - 30210551
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||    
T  30210629 aagggtaataatcacttatctctcggcttttccctcaataacttgcagaacaagtaacaaaagtacctaaaatatatca 30210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 5659497 - 5659434
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtg 65  Q
    ||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||    
T  5659497 agggctataatcacttatctctaggctttttcctcaataacttgcaaaacaagtaacaaaagtg 5659434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 666637 - 666582
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||||||||| ||||||||||||||||| |||||||||  ||| ||||||||||    
T  666637 caataatcacttttctctcggcttttccctgaataacttgtgaaataagtaacaaa 666582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 13570571 - 13570642
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    |||||||||||||  | | ||||||||||| ||| ||||||||| || ||||||||||||||||||| ||||    
T  13570571 agggcaataatcatctttttctcggctttttcctaaataacttgtaagacaagtaacaaaagtgccttaaat 13570642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 23542581 - 23542518
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtg 65  Q
    |||||||| ||||||| |||||||||||||||||  ||||||||  |||||||||||| |||||    
T  23542581 agggcaattatcacttttctctcggcttttccctagataacttgtgaaacaagtaacagaagtg 23542518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 52182225 - 52182173
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    ||||| ||||||||| ||||||||| || ||||||||||||||||||| ||||    
T  52182225 tctcgacttttccctaaataacttgtaagacaagtaacaaaagtgccttaaat 52182173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 54300654 - 54300607
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcct 68  Q
    |||| |||||||||| ||||||||| || |||||||||||||||||||    
T  54300654 tctcagcttttccctaaataacttgtaagacaagtaacaaaagtgcct 54300607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 49358671 - 49358610
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    |||||| ||||| ||||||| ||| ||||||||| || |||| |||||||||||||| ||||    
T  49358671 tcacttttctcttggctttttcctaaataacttgtaagacaaataacaaaagtgccttaaat 49358610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 6e-87; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 134 - 378
Target Start/End: Complemental strand, 520731 - 520487
Alignment:
Q  134 agtcatgaggaggcctgcaacagactaaacaaatgccaaaaattaccttgcaaaacttaattaagccaagtcttcaaagtgatctctacatcaagcctca 233  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  520731 agtcacgaggaggcctgcaacagactagacaaatgccaaaaattaccttacaaaacttaattaagccaagtcttcaaagtgatctctacatcaagcctca 520632  T
Q  234 aatgaatcataacggaatacaaacacnnnnnnntggtcatttgcttgaaaaattacaaagtttcaccttgcatatttgattaaatcgagaagtggctgtg 333  Q
    ||||||||||||||||||||||||||       ||||||| | |||||||||||||||||||||||||||||||||||||||||| |  |||||| ||||    
T  520631 aatgaatcataacggaatacaaacaccaaaaaatggtcatattcttgaaaaattacaaagtttcaccttgcatatttgattaaattggtaagtggttgtg 520532  T
Q  334 cnnnnnnnttataactcaagagtatcatgactttatgtgtttcaa 378  Q
    |       |||||||||| ||||||||||||||||||||||||||    
T  520531 caaaaaaattataactcatgagtatcatgactttatgtgtttcaa 520487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27501009 - 27500902
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27501009 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 27500910  T
Q  101 acttatca 108  Q
    ||||||||    
T  27500909 acttatca 27500902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6037450 - 6037558
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6037450 aagggcaataatcacttatttctcagcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 6037549  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  6037550 acttatcaa 6037558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9576048 - 9575940
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |    
T  9576048 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacgaaagtgcctaaaatatatcacttaaaatacaactttctagc 9575949  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  9575948 acttatcaa 9575940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24180242 - 24180354
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  24180242 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 24180341  T
Q  101 acttatcaatggt 113  Q
    |||||||| ||||    
T  24180342 acttatcagtggt 24180354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25894393 - 25894500
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  25894393 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 25894492  T
Q  101 acttatca 108  Q
    ||||||||    
T  25894493 acttatca 25894500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4310534 - 4310427
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| |||||| |    
T  4310534 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaaattcctaaaatatatcacttaaaatacaattttctagc 4310435  T
Q  101 acttatca 108  Q
    ||||||||    
T  4310434 acttatca 4310427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9569575 - 9569468
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |    
T  9569575 aagggcaataatcacttatttctcggctttttccttaataacttgcaaaacaagtaacgaaagtgcctaaaatatatcacttaaaatacaactttctagc 9569476  T
Q  101 acttatca 108  Q
    ||||||||    
T  9569475 acttatca 9569468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23069657 - 23069746
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattaca 90  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23069657 aagggaaataatcacttatttctcgacttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattaca 23069746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47442157 - 47442265
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||  ||| |||||||||||||||||| |    
T  47442157 aagggtaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgctttgaata-ctcatttaaattacaactttctagc 47442255  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  47442256 acttatcaat 47442265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20649959 - 20649853
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||| |||||| |||||||| |    
T  20649959 aagggcaataatcacttatctctcagcttttccctcaataacttgtaaaacaagtaacaaaagtgccttgaatat-tcacttgaattactactttctagc 20649861  T
Q  101 acttatca 108  Q
    ||||||||    
T  20649860 acttatca 20649853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32747537 - 32747615
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32747537 aagggcaataatcacttatttctcgacttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 32747615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 43932800 - 43932903
Alignment:
Q  4 ggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacact 103  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |  ||||| ||| ||||| |||||||||||| ||||    
T  43932800 ggcaataaccacttatctctcggcttttccctcaataacttgcaaaacaaataacaaaagtgctttgaatat-tcatttaaaatacaactttctagcact 43932898  T
Q  104 tatca 108  Q
    |||||    
T  43932899 tatca 43932903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 10940226 - 10940165
Alignment:
Q  4 ggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtg 65  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  10940226 ggcaataatcacttttctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtg 10940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43996333 - 43996439
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||| ||||||||| |||||||||| |||||| || ||||| |||||||||||||||||||||||| |  ||| | ||| ||||| |||||||||||| |    
T  43996333 aaggtcaataatcatttatctctcgacttttctctcaataatttgcaaaacaagtaacaaaagtgctttgaatgt-tcatttaaaatacaactttctagc 43996431  T
Q  101 acttatca 108  Q
    ||||||||    
T  43996432 acttatca 43996439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 4507595 - 4507656
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||| ||||||| ||||||||| |||||||||  |||||||||||||| |||||    
T  4507595 caataatcacttttctctcgacttttccctgaataacttgtgaaacaagtaacaaacgtgcc 4507656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 4591985 - 4592033
Alignment:
Q  19 tctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||||||||  |||||||| ||||||||||||||| |||||    
T  4591985 tctctcggcttttccctagataacttgtaaaacaagtaacaaacgtgcc 4592033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 27902154 - 27902206
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    ||||||||||||||| | | ||||| || ||||||||||||||||||| ||||    
T  27902154 tctcggcttttccctaacttacttgtaagacaagtaacaaaagtgccttaaat 27902206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 13901015 - 13900903
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13901015 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 13900916  T
Q  101 acttatcaatggt 113  Q
    |||||||||||||    
T  13900915 acttatcaatggt 13900903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34840298 - 34840190
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34840298 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 34840199  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  34840198 acttatcaa 34840190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12951978 - 12952085
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  12951978 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 12952077  T
Q  101 acttatca 108  Q
    ||||||||    
T  12952078 acttatca 12952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34833854 - 34833747
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34833854 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 34833755  T
Q  101 acttatca 108  Q
    ||||||||    
T  34833754 acttatca 34833747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43269028 - 43269135
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43269028 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 43269127  T
Q  101 acttatca 108  Q
    ||||||||    
T  43269128 acttatca 43269135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2158791 - 2158899
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  2158791 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaaatgcctaaaatatatcacttaaattacaactttctagc 2158890  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  2158891 acttatcaa 2158899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2165207 - 2165314
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  2165207 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaaatgcctaaaatatatcacttaaattacaactttctagc 2165306  T
Q  101 acttatca 108  Q
    ||||||||    
T  2165307 acttatca 2165314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 45013163 - 45013270
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  45013163 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaaatgcctaaaatatatcacttaaattacaactttctagc 45013262  T
Q  101 acttatca 108  Q
    ||||||||    
T  45013263 acttatca 45013270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15853716 - 15853823
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  15853716 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 15853815  T
Q  101 acttatca 108  Q
    ||||||||    
T  15853816 acttatca 15853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29486024 - 29486131
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  29486024 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 29486123  T
Q  101 acttatca 108  Q
    ||||||||    
T  29486124 acttatca 29486131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39505398 - 39505291
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  39505398 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 39505299  T
Q  101 acttatca 108  Q
    ||||||||    
T  39505298 acttatca 39505291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 36781238 - 36781130
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  36781238 aagggcaataatcacttatctctcggctcttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 36781139  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  36781138 acttatcaa 36781130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 42930436 - 42930328
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  42930436 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacatctttctagc 42930337  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  42930336 acttatcaa 42930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2020500 - 2020422
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  2020500 aagggcaataatcacttatctctcggcttttctctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 2020422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16816391 - 16816313
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16816391 aagggcaataatcacttatctctcggcttttctctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 16816313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16855548 - 16855470
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16855548 aagggcaataatcacttatctctcggcttttctctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 16855470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21340993 - 21340915
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  21340993 aagggaaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcttaaaatatatca 21340915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21066980 - 21066902
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21066980 aagggaaataatcacttatctctcgacatttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 21066902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 11908946 - 11908847
Alignment:
Q  9 taatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacacttatca 108  Q
    ||||||||| |||||||||||||||||  || |||||  ||||||||||||||||||||| ||||||| || || || ||| ||||||| ||||||||||    
T  11908946 taatcacttttctctcggcttttccctagattacttgtgaaacaagtaacaaaagtgccttaaatata-catttgaaatactactttctcacacttatca 11908848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 43670914 - 43671015
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||||  ||||| || | || || ||| ||||||| |||||||    
T  43670914 caataatcacttttctctcggcttttccctgaataacttgtgaaacaagtaacaaatgtgccgtaaata-ataatttgaaatactactttctgacactta 43671012  T
Q  106 tca 108  Q
    |||    
T  43671013 tca 43671015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 3363402 - 3363460
Alignment:
Q  8 ataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgc 66  Q
    |||||||||| ||||||| ||||||||| |||||||||  |||||||||||||| ||||    
T  3363402 ataatcacttttctctcgacttttccctgaataacttgtgaaacaagtaacaaatgtgc 3363460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 748243 - 748296
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaata 74  Q
    |||| |||||||| |  ||||||| |||||||||||||||||||||||||||||    
T  748243 tctcagcttttccttagataacttacaaaacaagtaacaaaagtgcctaaaata 748296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 22196965 - 22196926
Alignment:
Q  37 aataacttgcaaaacaagtaacaaaagtgcctaaaatata 76  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  22196965 aataacttgtaaaacaagtaacaaaagtgtctaaaatata 22196926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 77
Target Start/End: Original strand, 22605557 - 22605596
Alignment:
Q  38 ataacttgcaaaacaagtaacaaaagtgcctaaaatatat 77  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  22605557 ataacttgcaaaataagtaactaaagtgcctaaaatatat 22605596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8141502 - 8141393
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8141502 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 8141403  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  8141402 acttatcaat 8141393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 6796618 - 6796726
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6796618 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 6796717  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  6796718 acttatcaa 6796726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 36876724 - 36876832
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36876724 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 36876823  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  36876824 acttatcaa 36876832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 48346141 - 48346029
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48346141 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 48346042  T
Q  101 acttatcaatggt 113  Q
    |||||||| ||||    
T  48346041 acttatcattggt 48346029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 48352525 - 48352417
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48352525 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 48352426  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  48352425 acttatcaa 48352417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1380127 - 1380234
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1380127 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 1380226  T
Q  101 acttatca 108  Q
    ||||||||    
T  1380227 acttatca 1380234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1386231 - 1386338
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1386231 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 1386330  T
Q  101 acttatca 108  Q
    ||||||||    
T  1386331 acttatca 1386338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2447828 - 2447935
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2447828 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 2447927  T
Q  101 acttatca 108  Q
    ||||||||    
T  2447928 acttatca 2447935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3923149 - 3923042
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3923149 aagggcaataatcacttatttctcggcttttcccgtaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 3923050  T
Q  101 acttatca 108  Q
    ||||||||    
T  3923049 acttatca 3923042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9641971 - 9641862
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  9641971 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 9641872  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  9641871 acttatcaat 9641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8191943 - 8191835
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  8191943 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 8191844  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  8191843 acttatcaa 8191835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 14288888 - 14288996
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  14288888 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 14288987  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  14288988 acttatcaa 14288996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5048954 - 5048847
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  5048954 aagggcaataatcacttatttctcggcttttcccttaataacttacaaaacaagtaacaaaaatgcctaaaatatatcacttaaattacaactttctagc 5048855  T
Q  101 acttatca 108  Q
    ||||||||    
T  5048854 acttatca 5048847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8184383 - 8184276
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  8184383 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 8184284  T
Q  101 acttatca 108  Q
    ||||||||    
T  8184283 acttatca 8184276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26603153 - 26603260
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  26603153 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 26603252  T
Q  101 acttatca 108  Q
    ||||||||    
T  26603253 acttatca 26603260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6019924 - 6019817
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |    
T  6019924 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaataaaactttctagc 6019825  T
Q  101 acttatca 108  Q
    ||||||||    
T  6019824 acttatca 6019817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21643686 - 21643794
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| |    
T  21643686 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtcacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 21643785  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  21643786 acttatcaa 21643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23613556 - 23613659
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| |    
T  23613556 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgtctaaaatatatcatttaaaatacaactttctagc 23613655  T
Q  101 actt 104  Q
    ||||    
T  23613656 actt 23613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 14300065 - 14300163
Alignment:
Q  10 aatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacacttatca 108  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  14300065 aatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagcacttatca 14300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 15953647 - 15953725
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15953647 aagggaaataatcacttatctctcgggttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 15953725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19090952 - 19091030
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  19090952 aagggaaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacagaagtgcctaaaatatatca 19091030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39434205 - 39434314
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| |    
T  39434205 aagggcaataatcacctatctctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatatttaatttaaaatacaactttctagc 39434304  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  39434305 acttatcaat 39434314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15925322 - 15925429
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| | || |||  |||||||| |    
T  15925322 aagggaaataatcacttatctctcggcttttccctcaataacttgcaaaacaaataacaaaagtgcataaaatatatca-tgaatttaacactttctagc 15925420  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  15925421 acttatcaa 15925429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22853187 - 22853081
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| |    
T  22853187 aagggcaataatcacctatctctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatat-taatttaaaatacaactttctagc 22853089  T
Q  101 acttatca 108  Q
    ||||||||    
T  22853088 acttatca 22853081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 37027323 - 37027429
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| |    
T  37027323 aagggcaataatcgcttatctctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatat-taatttaaaatacaactttctagc 37027421  T
Q  101 acttatca 108  Q
    ||||||||    
T  37027422 acttatca 37027429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1947897 - 1947819
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||   ||||||| |||||||||||||||||||||||||    
T  1947897 aagggcaataatcacttatctctcggcttttccctcaataactaaaaaaacaaataacaaaagtgcctaaaatatatca 1947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33849764 - 33849686
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||    
T  33849764 aagggtaataatcacttatctctcggcttttgcctcaaaaacttgcaaaacaagtaacaaaagtgcgtaaaatatatca 33849686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 48456522 - 48456623
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    |||||||||||| ||||||||||||| ||| |||||||||  |||||||||||||| |||||  ||||| |||| || || ||| |||||||  ||||||    
T  48456522 caataatcacttttctctcggctttttcctgaataacttgtgaaacaagtaacaaacgtgccgtaaata-atcatttgaaatactactttctggcactta 48456620  T
Q  106 tca 108  Q
    |||    
T  48456621 tca 48456623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 41453916 - 41453813
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    |||||||||||| ||||||||||||||||| ||||||||   |||||||||||||| || ||  ||||| |||| || || ||| | ||||| |||||||    
T  41453916 caataatcacttttctctcggcttttccctgaataacttttgaaacaagtaacaaacgtaccataaata-atcatttgaaatactattttctgacactta 41453818  T
Q  106 tcaat 110  Q
    |||||    
T  41453817 tcaat 41453813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 9704304 - 9704375
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    |||||||||||||  | | ||||||||||| ||| ||||||||| || ||||||||||||||||||| ||||    
T  9704304 agggcaataatcatctttttctcggctttttcctaaataacttgtaagacaagtaacaaaagtgccttaaat 9704375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 28602625 - 28602529
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacacttatcaa 109  Q
    |||||| ||| |||||||||||||  |||||||| ||||||||||||||| |||||  ||||| | || ||||| ||| |||| || |||||||||||    
T  28602625 tcacttttctttcggcttttccctagataacttgtaaaacaagtaacaaacgtgccataaata-aacatttaaaataccacttcctgacacttatcaa 28602529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 10861219 - 10861164
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||| |||||||||||||||||  ||||||||  |||||||||||||| |||||    
T  10861219 tcacttttctctcggcttttccctagataacttgtgaaacaagtaacaaacgtgcc 10861164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 21900136 - 21900081
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||| |||||||||||||||||  ||||||||  |||||||||||||| |||||    
T  21900136 tcacttttctctcggcttttccctagataacttgtgaaacaagtaacaaatgtgcc 21900081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39052361 - 39052252
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39052361 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 39052262  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  39052261 acttatcaat 39052252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42093076 - 42093185
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42093076 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 42093175  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  42093176 acttatcaat 42093185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 39058733 - 39058625
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39058733 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 39058634  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  39058633 acttatcaa 39058625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45016961 - 45017069
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  45016961 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 45017060  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  45017061 acttatcaa 45017069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6239824 - 6239931
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6239824 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 6239923  T
Q  101 acttatca 108  Q
    ||||||||    
T  6239924 acttatca 6239931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45023701 - 45023810
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |    
T  45023701 aagggcaataatcacttatctctcggcttttcccttaataacttgcataataagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 45023800  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  45023801 acttatcaat 45023810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28997174 - 28997281
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  28997174 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 28997273  T
Q  101 acttatca 108  Q
    ||||||||    
T  28997274 acttatca 28997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29002890 - 29002997
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  29002890 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 29002989  T
Q  101 acttatca 108  Q
    ||||||||    
T  29002990 acttatca 29002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43687798 - 43687905
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  43687798 aagggcaataattacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 43687897  T
Q  101 acttatca 108  Q
    ||||||||    
T  43687898 acttatca 43687905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 44242525 - 44242632
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44242525 aagggcaataatcacttatctctcggcttttccctcagtaacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctaac 44242624  T
Q  101 acttatca 108  Q
    ||||||||    
T  44242625 acttatca 44242632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 35086168 - 35086276
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  35086168 aagggcaataaccacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 35086267  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  35086268 acttatcaa 35086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4600697 - 4600804
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| |    
T  4600697 aagggcaataatcacttatctcccggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaagtatatcatttaaaatacaactttctagc 4600796  T
Q  101 acttatca 108  Q
    ||||||||    
T  4600797 acttatca 4600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1175761 - 1175839
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1175761 aagggcaataatcacttatctctcagcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 1175839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32798883 - 32798960
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32798883 aagggcaataatcacttatctctcggcttttccctta-taacttgcaaaacaagtaacaaaagtgcctaaaatatatca 32798960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 41304583 - 41304505
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  41304583 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtatcaaaagtgcctaaaatatatca 41304505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23761416 - 23761338
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23761416 aagggcaataatcatttatctctcagcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 23761338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1115118 - 1115011
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgc-aaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaa 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |  ||||| ||| ||||| ||||||||||||     
T  1115118 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaaacaagtaacaaaagtgctttgaatat-tcatttaaaatacaactttctag 1115020  T
Q  100 cacttatca 108  Q
    |||||||||    
T  1115019 cacttatca 1115011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 31073553 - 31073660
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| ||| ||||| |||||||||||| |    
T  31073553 aagggcaataatcacttatatctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatat-tcatttaaaatacaactttctagc 31073651  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  31073652 acttatcaa 31073660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26622629 - 26622707
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26622629 aagggaaataatcacttatatctcgacttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 26622707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 11912223 - 11912151
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaata 74  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11912223 agggcaattaacacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaata 11912151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9870245 - 9870351
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |  ||||| ||| ||||| ||| ||||| || |    
T  9870245 aagggtaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaaatgctttgaatat-tcatttaaaataccactttttagc 9870343  T
Q  101 acttatca 108  Q
    ||||||||    
T  9870344 acttatca 9870351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 23252549 - 23252625
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||| | ||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  23252549 agggcaattaacacttatctctcggcttttcc-tcaataacttgcaaagcaagtaacaaaagtgcctaaaatatatca 23252625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 44917611 - 44917718
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaaca 101  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||| |  ||||| ||| ||||| ||||| ||||||  |    
T  44917611 agggcaattatcacttatctctcgacttttccctcaataacttgcaaagcaagtaacaaaggtgctttgaatat-tcatttaaaatacaaatttctagta 44917709  T
Q  102 cttatcaat 110  Q
    |||||||||    
T  44917710 cttatcaat 44917718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 47295152 - 47295213
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||||    
T  47295152 caataatcacttttctctcggcttttccctgaataacttgtgaaacaagtaacaaacgtgcc 47295213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 21818640 - 21818699
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  21818640 agggcaattatcacttttctctcggcttttccctaaataacttgtgaaacaagtaacaaa 21818699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 31475807 - 31475892
Alignment:
Q  25 ggcttttcccttaataacttgcaaaacaagtaac-aaaagtgcctaaaatatatcacttaaattacaactttctaacacttatcaat 110  Q
    ||||||||||| ||||||||| |||||||||||| |||||||| ||| |||||||| || | |||| |||||||| |||||||||||    
T  31475807 ggcttttccctaaataacttgtaaaacaagtaactaaaagtgcttaatatatatca-tttatttactactttctagcacttatcaat 31475892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 7062743 - 7062707
Alignment:
Q  38 ataacttgcaaaacaagtaacaaaagtgcctaaaata 74  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7062743 ataacttgcaaaacaagtaactaaagtgcctaaaata 7062707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 13249919 - 13249965
Alignment:
Q  26 gcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaa 72  Q
    |||||||| | ||||||||| |||||||||||| |||||||||||||    
T  13249919 gcttttccttaaataacttgtaaaacaagtaactaaagtgcctaaaa 13249965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 28412716 - 28412667
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||| |||||||||||||||||  ||||||||  ||||||||||||||    
T  28412716 tcacttttctctcggcttttccctagataacttgtgaaacaagtaacaaa 28412667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 101; Significance: 6e-50; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 50870 - 50978
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50870 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 50969  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  50970 acttatcaa 50978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 71606 - 71684
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  71606 aagggtaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 71684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 65957 - 66015
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  65957 tctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 66015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 6e-50; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 8012362 - 8012254
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8012362 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 8012263  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  8012262 acttatcaa 8012254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 6463618 - 6463511
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6463618 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 6463519  T
Q  101 acttatca 108  Q
    ||||||||    
T  6463518 acttatca 6463511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 7312527 - 7312634
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7312527 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 7312626  T
Q  101 acttatca 108  Q
    ||||||||    
T  7312627 acttatca 7312634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36004526 - 36004419
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36004526 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 36004427  T
Q  101 acttatca 108  Q
    ||||||||    
T  36004426 acttatca 36004419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36077145 - 36077252
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36077145 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 36077244  T
Q  101 acttatca 108  Q
    ||||||||    
T  36077245 acttatca 36077252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36020790 - 36020681
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  36020790 aagggcaataatcacttatttctcagcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 36020691  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  36020690 acttatcaat 36020681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11357266 - 11357157
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11357266 aagggcaataatcacttatttctcggcttttccctcaataacttgtaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 11357167  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  11357166 acttatcaat 11357157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16709724 - 16709617
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16709724 aagggcaataatcacttatttctcggctttttccgtaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 16709625  T
Q  101 acttatca 108  Q
    ||||||||    
T  16709624 acttatca 16709617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 36424720 - 36424613
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  36424720 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 36424621  T
Q  101 acttatca 108  Q
    ||||||||    
T  36424620 acttatca 36424613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15013652 - 15013758
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |  ||||| ||| ||||| |||||||||||| |    
T  15013652 aagggcaataatcacttatctctcggtttttccctcaataacttgcaaaacaagtaacaaaagtgctttgaatat-tcatttaaaatacaactttctagc 15013750  T
Q  101 acttatca 108  Q
    ||||||||    
T  15013751 acttatca 15013758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45067502 - 45067394
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| ||| ||||| |||||||||||| |    
T  45067502 aagggtaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatat-tcatttaaaatacaactttctagc 45067404  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  45067403 acttatcaat 45067394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12770038 - 12770142
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||||||||||  |||||| ||||| |||||||||||| |    
T  12770038 aagggcaataatcacttatatctcggcttttccctcaataacttgcaaaacaag-aacacaagtgcctaaa--atatcatttaaaatacaactttctagc 12770134  T
Q  101 acttatca 108  Q
    ||||||||    
T  12770135 acttatca 12770142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 4973083 - 4973135
Alignment:
Q  25 ggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatat 77  Q
    |||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  4973083 ggcttttccctagataacttgtaaaacaagtaacaaaagtgcctaaaatatat 4973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 2267453 - 2267352
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    |||||||||||| ||||||||||||| ||| |||||||||  ||| |||||||||| ||| |  ||||| |||| || || ||| |||||||| ||||||    
T  2267453 caataatcacttttctctcggctttttcctgaataacttgtgaaataagtaacaaacgtgtcgtaaata-atcatttgaaatactactttctagcactta 2267355  T
Q  106 tca 108  Q
    |||    
T  2267354 tca 2267352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 5063079 - 5063025
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaa 60  Q
    |||||||||||| |||| |||||||||||| |||||||||  |||||||||||||    
T  5063079 caataatcacttttctcccggcttttccctgaataacttgtgaaacaagtaacaa 5063025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 38658327 - 38658388
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||| ||||| ||||||||||| ||||| |||  |||| ||||||||| |||||    
T  38658327 caataatcacttttctcttggcttttccctgaataatttgtgaaactagtaacaaacgtgcc 38658388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 7932959 - 7932911
Alignment:
Q  19 tctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  7932959 tctctcggcttttccctagataacttgtaaaacaagttacaaacgtgcc 7932911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4025703 - 4025595
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4025703 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 4025604  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  4025603 acttatcaa 4025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4717582 - 4717474
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4717582 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 4717483  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  4717482 acttatcaa 4717474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 34649980 - 34650088
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34649980 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 34650079  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  34650080 acttatcaa 34650088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1427465 - 1427358
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1427465 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 1427366  T
Q  101 acttatca 108  Q
    ||||||||    
T  1427365 acttatca 1427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4019277 - 4019170
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4019277 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 4019178  T
Q  101 acttatca 108  Q
    ||||||||    
T  4019177 acttatca 4019170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 7061557 - 7061450
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7061557 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 7061458  T
Q  101 acttatca 108  Q
    ||||||||    
T  7061457 acttatca 7061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11065186 - 11065079
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11065186 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 11065087  T
Q  101 acttatca 108  Q
    ||||||||    
T  11065086 acttatca 11065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31128342 - 31128235
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31128342 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 31128243  T
Q  101 acttatca 108  Q
    ||||||||    
T  31128242 acttatca 31128235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32327535 - 32327428
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32327535 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 32327436  T
Q  101 acttatca 108  Q
    ||||||||    
T  32327435 acttatca 32327428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34656431 - 34656538
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34656431 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 34656530  T
Q  101 acttatca 108  Q
    ||||||||    
T  34656531 acttatca 34656538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7068743 - 7068635
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7068743 aagggcaataatcacttatttctcggcttttcccttaataacttacaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 7068644  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  7068643 acttatcaa 7068635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 21261626 - 21261518
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21261626 aagggaaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 21261527  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  21261526 acttatcaa 21261518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9863816 - 9863707
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  9863816 aagggcaataattacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 9863717  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  9863716 acttatcaat 9863707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4189099 - 4189207
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  4189099 aagggcaataatcacttatttctcagcttttcccttaataacttgcaaaacaagtaacgaaagtgcctaaaatatatcacttaaattacaactttctagc 4189198  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  4189199 acttatcaa 4189207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4737369 - 4737261
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  4737369 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 4737270  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  4737269 acttatcaa 4737261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4668386 - 4668279
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  4668386 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 4668287  T
Q  101 acttatca 108  Q
    ||||||||    
T  4668286 acttatca 4668279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4675233 - 4675126
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  4675233 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 4675134  T
Q  101 acttatca 108  Q
    ||||||||    
T  4675133 acttatca 4675126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31549046 - 31549153
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  31549046 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 31549145  T
Q  101 acttatca 108  Q
    ||||||||    
T  31549146 acttatca 31549153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 34710612 - 34710505
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  34710612 aagggcaataatcacttatttctcggcttttctcttaataacttgcaaaacaagtaacaaaagtgactaaaatatatcacttaaattacaactttctagc 34710513  T
Q  101 acttatca 108  Q
    ||||||||    
T  34710512 acttatca 34710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13670878 - 13670769
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |    
T  13670878 aagggcaataatcacttatctctcggctttttcctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatataatttaaaatacaactttctagc 13670779  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  13670778 acttatcaat 13670769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 27671278 - 27671387
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| |    
T  27671278 aagggcaataatcacttatctctcggctttttcctcaataacttgcaaaacaagtaataaaagtgctttgaatat-taatttaaaatacaactttctagc 27671376  T
Q  101 acttatcaatg 111  Q
    |||||||||||    
T  27671377 acttatcaatg 27671387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 1166437 - 1166338
Alignment:
Q  8 ataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacacttatc 107  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||||||| | |||||| ||| ||||| |||||||||||| || |||||    
T  1166437 ataatcacttatctctcggtttttccctaaataacttggaaaacaagtaataaaagtgctttaaatat-tcatttaaaatacaactttctagcatttatc 1166339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 13735187 - 13735126
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||||    
T  13735187 caataatcacttttctctcggcttttccctgaataacttgtgaaacaagtaacaaacgtgcc 13735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 1052362 - 1052423
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||| |||||||||||||| || |||||||||  |||||||||||||| |||||    
T  1052362 caataatcacttttctctcggcttttctctgaataacttgagaaacaagtaacaaacgtgcc 1052423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 13556251 - 13556319
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaata 74  Q
    |||||||||||| ||||||| ||||||||| |||||| ||  |||||||||||||| ||||| ||||||    
T  13556251 caataatcacttttctctcgacttttccctgaataacatgtgaaacaagtaacaaatgtgccgaaaata 13556319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 18751353 - 18751397
Alignment:
Q  28 ttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaa 72  Q
    |||||| | |||||||||||||||||||||| |||||||||||||    
T  18751353 ttttccttaaataacttgcaaaacaagtaactaaagtgcctaaaa 18751397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 76
Target Start/End: Original strand, 22871523 - 22871561
Alignment:
Q  38 ataacttgcaaaacaagtaacaaaagtgcctaaaatata 76  Q
    |||||||| ||||||||||||||||||| ||||||||||    
T  22871523 ataacttgtaaaacaagtaacaaaagtgtctaaaatata 22871561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 18766857 - 18766909
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaat 73  Q
    ||||| ||||||||| | ||||||| || ||||||||||||||||||| ||||    
T  18766857 tctcgacttttccctaactaacttgtaagacaagtaacaaaagtgccttaaat 18766909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 6e-50; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2959040 - 2959148
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2959040 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 2959139  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  2959140 acttatcaa 2959148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2967509 - 2967617
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2967509 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 2967608  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  2967609 acttatcaa 2967617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 29975139 - 29975247
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29975139 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 29975238  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  29975239 acttatcaa 29975247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 30021503 - 30021395
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  30021503 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 30021404  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  30021403 acttatcaa 30021395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 29981642 - 29981749
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29981642 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctagc 29981741  T
Q  101 acttatca 108  Q
    ||||||||    
T  29981742 acttatca 29981749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 4974735 - 4974843
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  4974735 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 4974834  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  4974835 acttatcaa 4974843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34356308 - 34356200
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  34356308 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatattacttaaaatacaactttctagc 34356209  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  34356208 acttatcaa 34356200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 34358099 - 34357991
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |    
T  34358099 aagggcaataatcacttatttctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatattacttaaaatacaactttctagc 34358000  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  34357999 acttatcaa 34357991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25893638 - 25893531
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  25893638 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 25893539  T
Q  101 acttatca 108  Q
    ||||||||    
T  25893538 acttatca 25893531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40957669 - 40957560
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  40957669 aagggcaataatcacttatctcttggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 40957570  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  40957569 acttatcaat 40957560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42151987 - 42152095
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||  |||| |||||    
T  42151987 aagggaaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca-tgaatttaacacttcctaac 42152085  T
Q  101 acttatcaat 110  Q
    ||||||||||    
T  42152086 acttatcaat 42152095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5877386 - 5877464
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5877386 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 5877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22314996 - 22315074
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22314996 aagggcaataatcatttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 22315074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2440045 - 2440151
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||| ||| ||||| |||||||||||| |    
T  2440045 aaggacaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgctttgaatat-tcatttaaaatacaactttctagc 2440143  T
Q  101 acttatca 108  Q
    ||||||||    
T  2440144 acttatca 2440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29413721 - 29413643
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  29413721 aagggcaataatcacttatctctcgacttttccttcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 29413643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2823421 - 2823527
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    |||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||||| ||| || |||||| |||||||  |    
T  2823421 aagggccataatcacttatctctcggcttttcc-tagataacttgcaaaacaagtaacaaaagtgccttaaatat-tcatttgaattactactttctggc 2823518  T
Q  101 acttatcaa 109  Q
    |||||||||    
T  2823519 acttatcaa 2823527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 4693282 - 4693181
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| |||||  ||||| |||| || || ||| |||||||  ||||||    
T  4693282 caataatcacttttctctcggcttttccctgaataacttgtgaaacaagtaacaaacgtgccgtaaata-atcatttgaaatactactttctggcactta 4693184  T
Q  106 tca 108  Q
    |||    
T  4693183 tca 4693181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 12504790 - 12504724
Alignment:
Q  14 acttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtg-cctaaaatatatca 79  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||| | ||||||||||||    
T  12504790 acttatctctcggcttttccctcaataacttacaaagcaagtaacaaaagtgtcgtaaaatatatca 12504724  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 20900483 - 20900542
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||||| ||||||| |||||||||||||||||  ||||||||  ||||||||||||||    
T  20900483 agggcaattatcacttttctctcggcttttccctacataacttgtgaaacaagtaacaaa 20900542  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 37336431 - 37336512
Alignment:
Q  28 ttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaatt-acaactttctaacacttatcaa 109  Q
    |||||| | ||||||||| |||||||||||||||||||||| ||||||| || | || || || |||||||||||||||||||    
T  37336431 ttttccttaaataacttgtaaaacaagtaacaaaagtgccttaaatataaca-tgaatttaactactttctaacacttatcaa 37336512  T

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Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 42748266 - 42748312
Alignment:
Q  26 gcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaa 72  Q
    |||||||| | |||||||||||||||||||||| |||||||||||||    
T  42748266 gcttttccttaaataacttgcaaaacaagtaactaaagtgcctaaaa 42748312  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9844550 - 9844598
Alignment:
Q  19 tctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcc 67  Q
    |||||||||||||||||  |||||||| ||||||||||||||| |||||    
T  9844550 tctctcggcttttccctagataacttgtaaaacaagtaacaaacgtgcc 9844598  T

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Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 30579225 - 30579161
Alignment:
Q  12 tcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatata 76  Q
    |||||| ||||||||||||||||| |||||||||  |||||| | |||||||||| | |||||||    
T  30579225 tcacttttctctcggcttttccctaaataacttgtgaaacaaattacaaaagtgctttaaatata 30579161  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22361130 - 22361182
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagt 55  Q
    |||||||||||||| |||||||  ||||||| ||| |||||||||||||||||||    
T  22361130 aagggcaataatcatttatctc--ggctttttcctcaataacttgcaaaacaagt 22361182  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 28404042 - 28404007
Alignment:
Q  37 aataacttgcaaaacaagtaacaaaagtgcctaaaa 72  Q
    |||||||||||||||||||||| |||||||||||||    
T  28404042 aataacttgcaaaacaagtaactaaagtgcctaaaa 28404007  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 2153142 - 2153100
Alignment:
Q  19 tctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||||||||||||||  |||||||| |||||||||||||||    
T  2153142 tctctcggcttttccctagataacttgtaaaacaagtaacaaa 2153100  T

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Target: scaffold0475 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 9024 - 9131
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  9024 aagggcaataatcacttatttctcggcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 9123  T
Q  101 acttatca 108  Q
    ||||||||    
T  9124 acttatca 9131  T

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Target: scaffold0043 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4047 - 3940
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  4047 aagggcaataatcacttatttctcggcttttcccttaataactttcaaaacaagtaacaaaattgcctaaaatatatcacttaaattacaactttctagc 3948  T
Q  101 acttatca 108  Q
    ||||||||    
T  3947 acttatca 3940  T

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Target: scaffold0536 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11408 - 11298
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  11408 aagggcaataatcacttatttctcgacttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaaatacaactttctagc 11309  T
Q  101 acttatcaatg 111  Q
    |||||||||||    
T  11308 acttatcaatg 11298  T

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Target: scaffold0510 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2192 - 2299
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |    
T  2192 aagggcaataatcacttatttctcagcttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcatttaaaatacaactttctagc 2291  T
Q  101 acttatca 108  Q
    ||||||||    
T  2292 acttatca 2299  T

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Target: scaffold0510; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7944 - 7866
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  7944 aagggcaataatcacttatctctcggcttttccctcaataacttgcaaaacaagtatcaaaagtgcctaaaatatatca 7866  T

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Target: scaffold0513 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11198 - 11120
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 79  Q
    ||||||||||||||||||| ||| |  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11198 aagggcaataatcacttatttcttgttttttccctcaataacttgcaaaacaagtaacaaaagtgcctaaaatatatca 11120  T

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Target: scaffold0343 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3983 - 4089
Alignment:
Q  1 aagggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaac 100  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |  ||||| | | ||||| |||||||||||| |    
T  3983 aagggaaataatcacctatctctcggcttttccctcaataacttgcaaaacaagtaataaaagtgctttgaatat-taatttaaaatacaactttctagc 4081  T
Q  101 acttatca 108  Q
    ||||||||    
T  4082 acttatca 4089  T

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Target: scaffold0265 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 14169 - 14110
Alignment:
Q  2 agggcaataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaa 61  Q
    |||||||| ||||||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  14169 agggcaattatcacttttctctcggcttttccctaaataacttgtgaaacaagtaacaaa 14110  T

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Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 203155 - 203257
Alignment:
Q  6 caataatcacttatctctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgcctaaaatatatcacttaaattacaactttctaacactta 105  Q
    ||||||||| || ||||||||||||||||| |||||||||  |||||||||||||| |||||  ||||| |||| || || ||| |||||||  ||||||    
T  203155 caataatcatttttctctcggcttttccctgaataacttgtgaaacaagtaacaaacgtgccgtaaata-atcatttgaaatactactttctggcactta 203253  T
Q  106 tcaa 109  Q
    ||||    
T  203254 tcaa 203257  T

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Target: scaffold1487 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 1130 - 1085
Alignment:
Q  21 tctcggcttttcccttaataacttgcaaaacaagtaacaaaagtgc 66  Q
    ||||||||||||||| ||||||||  || |||||||||||||||||    
T  1130 tctcggcttttccctaaataacttttaagacaagtaacaaaagtgc 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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