View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1430_low_13 (Length: 353)
Name: NF1430_low_13
Description: NF1430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1430_low_13 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 353
Target Start/End: Original strand, 24813706 - 24814040
Alignment:
| Q |
19 |
taacattcagaaaaacttaaccattcaatgttgtcacagctagacaacaaaatccggatatactcttcggatttcaaatcaactttgaagagttccaaat |
118 |
Q |
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| T |
24813706 |
taacattcagaaaaacttaaccattcaatgttgtcacagctagacaacaaattccggatataatcttcggatttcaaatcaactttgaagagttccaaat |
24813805 |
T |
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| Q |
119 |
ttgtgagtgtactaaaaccatagcatggtttttgtggagcaagtacacaatgcgctaagcgtaaacggttaaaaaatgacttgaaaccaaacatgtcaca |
218 |
Q |
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| T |
24813806 |
ttgtgagtgtactaaaaccatagcatggtttttgtggagcaagtacacaatgcactaagcataaacggttaaaaaatgacttgaaaccaaacatgtcaca |
24813905 |
T |
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| Q |
219 |
agggaaaacataggaggaaccatcattatgagcacttaaatgattctcttctaacaaacaaagatcaatctcttctacatttcgttccaccgcgaaccaa |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
24813906 |
agggaaaacataggaggaaccatcattatgagcacttaaatgattctcttctaacaaacaaagatcaatctcttctacatttcgttccaccgcgaaccga |
24814005 |
T |
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| Q |
319 |
atccattcatcgagatcattgcaaccgtacccttt |
353 |
Q |
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||||||||||||||||||||||||||||| ||||| |
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| T |
24814006 |
atccattcatcgagatcattgcaaccgtatccttt |
24814040 |
T |
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