View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1430_low_27 (Length: 241)

Name: NF1430_low_27
Description: NF1430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1430_low_27
NF1430_low_27
[»] chr4 (40 HSPs)
chr4 (1-144)||(39197151-39197293)
chr4 (164-223)||(39197015-39197074)
chr4 (164-225)||(20262373-20262434)
chr4 (164-208)||(36513306-36513350)
chr4 (170-225)||(16070502-16070557)
chr4 (164-225)||(20293812-20293873)
chr4 (164-225)||(43509146-43509207)
chr4 (171-223)||(41945754-41945806)
chr4 (170-225)||(20185635-20185690)
chr4 (171-225)||(5168051-5168105)
chr4 (171-217)||(20116522-20116568)
chr4 (171-225)||(20291412-20291466)
chr4 (171-225)||(22750821-22750875)
chr4 (171-225)||(25477297-25477351)
chr4 (175-225)||(30153201-30153251)
chr4 (171-225)||(33246476-33246530)
chr4 (171-225)||(52226091-52226145)
chr4 (175-225)||(54438586-54438636)
chr4 (170-225)||(52198707-52198762)
chr4 (183-225)||(3113450-3113492)
chr4 (171-225)||(5448734-5448788)
chr4 (171-221)||(7002255-7002305)
chr4 (183-225)||(10602189-10602231)
chr4 (175-225)||(19654504-19654554)
chr4 (171-225)||(34643466-34643520)
chr4 (171-225)||(38136427-38136481)
chr4 (171-225)||(43800880-43800934)
chr4 (171-225)||(56373323-56373377)
chr4 (164-225)||(5416848-5416909)
chr4 (170-211)||(20791998-20792039)
chr4 (175-220)||(26170251-26170296)
chr4 (164-221)||(37175005-37175062)
chr4 (164-225)||(41459652-41459713)
chr4 (164-225)||(41920017-41920078)
chr4 (171-216)||(51787843-51787888)
chr4 (171-203)||(5536569-5536601)
chr4 (171-223)||(5932958-5933010)
chr4 (175-211)||(25841983-25842019)
chr4 (171-211)||(28116498-28116538)
chr4 (164-208)||(32107910-32107954)
[»] chr2 (39 HSPs)
chr2 (171-225)||(11459225-11459279)
chr2 (171-225)||(375324-375378)
chr2 (169-223)||(12498249-12498303)
chr2 (175-225)||(23464759-23464809)
chr2 (164-225)||(24774930-24774991)
chr2 (171-222)||(14527695-14527746)
chr2 (171-225)||(8065051-8065105)
chr2 (164-222)||(43650099-43650157)
chr2 (170-225)||(25731165-25731220)
chr2 (171-225)||(2048809-2048863)
chr2 (171-225)||(3237795-3237849)
chr2 (171-225)||(27297649-27297703)
chr2 (171-225)||(28190670-28190724)
chr2 (171-225)||(32677547-32677601)
chr2 (171-225)||(44421521-44421575)
chr2 (171-225)||(44424667-44424721)
chr2 (170-222)||(2131828-2131880)
chr2 (181-225)||(13534487-13534531)
chr2 (168-216)||(38982059-38982107)
chr2 (171-211)||(43119362-43119402)
chr2 (164-203)||(12417619-12417658)
chr2 (164-203)||(12429679-12429718)
chr2 (171-225)||(247732-247786)
chr2 (164-217)||(1246399-1246453)
chr2 (171-225)||(16808802-16808856)
chr2 (171-225)||(16848083-16848137)
chr2 (171-225)||(21012925-21012979)
chr2 (171-225)||(34330074-34330128)
chr2 (171-217)||(37355108-37355154)
chr2 (171-225)||(41665782-41665836)
chr2 (164-225)||(2917080-2917141)
chr2 (164-220)||(6275551-6275608)
chr2 (164-225)||(35178772-35178833)
chr2 (164-225)||(40346060-40346121)
chr2 (185-222)||(44274501-44274538)
chr2 (164-224)||(2521280-2521340)
chr2 (171-215)||(11071740-11071784)
chr2 (171-203)||(31644443-31644475)
chr2 (171-211)||(38449707-38449747)
[»] chr6 (21 HSPs)
chr6 (164-225)||(5457252-5457313)
chr6 (171-225)||(1763885-1763939)
chr6 (164-222)||(12514568-12514626)
chr6 (172-220)||(20523045-20523093)
chr6 (164-220)||(31152973-31153029)
chr6 (164-223)||(12503595-12503654)
chr6 (170-225)||(30465948-30466003)
chr6 (171-225)||(34513198-34513252)
chr6 (171-224)||(9461365-9461418)
chr6 (181-225)||(30248944-30248988)
chr6 (170-225)||(31536083-31536138)
chr6 (171-225)||(197431-197485)
chr6 (171-217)||(6791448-6791494)
chr6 (175-225)||(7365563-7365613)
chr6 (183-225)||(11082155-11082197)
chr6 (171-225)||(31039218-31039272)
chr6 (171-225)||(31945892-31945946)
chr6 (164-213)||(10669266-10669315)
chr6 (171-220)||(16327195-16327244)
chr6 (171-220)||(16350593-16350642)
chr6 (171-223)||(3729494-3729546)
[»] chr3 (35 HSPs)
chr3 (164-225)||(14645870-14645931)
chr3 (170-224)||(13084340-13084394)
chr3 (183-225)||(35765625-35765667)
chr3 (171-225)||(50363098-50363152)
chr3 (171-225)||(50524957-50525011)
chr3 (164-225)||(11388185-11388246)
chr3 (170-225)||(22659650-22659705)
chr3 (170-225)||(37729010-37729065)
chr3 (171-226)||(46048593-46048648)
chr3 (171-217)||(12077732-12077778)
chr3 (171-225)||(20945281-20945335)
chr3 (175-225)||(26517196-26517246)
chr3 (164-225)||(40645738-40645799)
chr3 (181-225)||(46435712-46435757)
chr3 (173-225)||(5504556-5504608)
chr3 (164-223)||(31826256-31826315)
chr3 (171-222)||(42891490-42891541)
chr3 (171-222)||(44083698-44083749)
chr3 (171-225)||(831341-831395)
chr3 (171-221)||(26243543-26243593)
chr3 (171-225)||(31474495-31474549)
chr3 (171-225)||(31819477-31819531)
chr3 (171-225)||(33287937-33287991)
chr3 (171-225)||(35055857-35055911)
chr3 (171-217)||(39617239-39617285)
chr3 (171-225)||(39931952-39932006)
chr3 (171-225)||(41308757-41308811)
chr3 (171-225)||(48309515-48309569)
chr3 (171-225)||(51263153-51263207)
chr3 (164-225)||(26998959-26999020)
chr3 (164-225)||(28477449-28477510)
chr3 (170-223)||(29611904-29611957)
chr3 (171-216)||(35145302-35145347)
chr3 (171-211)||(26043090-26043130)
chr3 (185-225)||(31531109-31531149)
[»] chr7 (36 HSPs)
chr7 (164-225)||(19236046-19236107)
chr7 (171-225)||(21809626-21809680)
chr7 (170-225)||(4089479-4089534)
chr7 (171-225)||(1324780-1324834)
chr7 (171-225)||(10408547-10408601)
chr7 (164-225)||(42983593-42983654)
chr7 (171-223)||(25750440-25750492)
chr7 (171-222)||(5334377-5334428)
chr7 (171-225)||(20123522-20123577)
chr7 (171-225)||(2276556-2276610)
chr7 (171-225)||(21388314-21388368)
chr7 (171-225)||(26200947-26201001)
chr7 (164-222)||(48610118-48610176)
chr7 (164-225)||(24700675-24700736)
chr7 (168-221)||(28038871-28038924)
chr7 (164-217)||(37673802-37673855)
chr7 (164-225)||(46783820-46783881)
chr7 (171-215)||(21752600-21752644)
chr7 (171-211)||(37491612-37491652)
chr7 (171-223)||(43601146-43601198)
chr7 (164-216)||(44648703-44648755)
chr7 (164-211)||(43465136-43465183)
chr7 (170-224)||(21392873-21392927)
chr7 (171-225)||(29636020-29636074)
chr7 (171-225)||(29723533-29723587)
chr7 (171-217)||(35128456-35128502)
chr7 (183-225)||(36726153-36726195)
chr7 (171-225)||(37048107-37048161)
chr7 (171-225)||(40263783-40263837)
chr7 (171-216)||(10685157-10685202)
chr7 (171-219)||(6376118-6376166)
chr7 (171-211)||(31373691-31373731)
chr7 (170-222)||(35960449-35960501)
chr7 (170-222)||(38729673-38729725)
chr7 (171-211)||(42993181-42993221)
chr7 (171-211)||(49100743-49100783)
[»] chr1 (39 HSPs)
chr1 (164-225)||(4817884-4817945)
chr1 (164-225)||(4829684-4829745)
chr1 (164-225)||(44652839-44652900)
chr1 (171-223)||(46591173-46591225)
chr1 (171-225)||(51997026-51997081)
chr1 (171-225)||(23982570-23982624)
chr1 (171-225)||(47070939-47070993)
chr1 (171-225)||(47643611-47643665)
chr1 (171-225)||(51390515-51390569)
chr1 (164-225)||(5322001-5322062)
chr1 (164-225)||(20564839-20564900)
chr1 (171-223)||(15457795-15457847)
chr1 (171-223)||(47754622-47754674)
chr1 (171-225)||(48721846-48721900)
chr1 (164-225)||(2342968-2343029)
chr1 (164-225)||(3143467-3143528)
chr1 (164-225)||(3143714-3143775)
chr1 (164-225)||(5085067-5085128)
chr1 (171-224)||(15179481-15179534)
chr1 (164-225)||(32152222-32152283)
chr1 (171-223)||(4081997-4082049)
chr1 (171-223)||(13723458-13723510)
chr1 (164-220)||(35365967-35366023)
chr1 (170-225)||(3072207-3072262)
chr1 (171-226)||(24415071-24415126)
chr1 (171-222)||(29140635-29140686)
chr1 (171-221)||(4813444-4813494)
chr1 (171-225)||(8984639-8984693)
chr1 (164-222)||(16582597-16582655)
chr1 (169-211)||(28679814-28679856)
chr1 (171-225)||(31305389-31305443)
chr1 (171-225)||(44395606-44395660)
chr1 (175-225)||(46732938-46732988)
chr1 (171-224)||(25063281-25063334)
chr1 (170-223)||(34331945-34331998)
chr1 (170-223)||(52141155-52141208)
chr1 (171-211)||(10160783-10160823)
chr1 (171-223)||(15911532-15911584)
chr1 (186-225)||(44335378-44335418)
[»] chr5 (33 HSPs)
chr5 (170-222)||(43454053-43454105)
chr5 (171-225)||(20946159-20946213)
chr5 (171-225)||(27587910-27587964)
chr5 (171-225)||(16093-16147)
chr5 (171-225)||(5845248-5845302)
chr5 (164-222)||(12895190-12895248)
chr5 (171-225)||(29866261-29866315)
chr5 (164-225)||(9375617-9375678)
chr5 (171-223)||(600837-600889)
chr5 (171-219)||(8717943-8717991)
chr5 (171-223)||(10934078-10934130)
chr5 (170-225)||(32401432-32401487)
chr5 (164-223)||(36347581-36347640)
chr5 (170-220)||(731935-731985)
chr5 (171-225)||(3559005-3559059)
chr5 (171-225)||(4738702-4738756)
chr5 (171-225)||(35568983-35569037)
chr5 (164-225)||(10523252-10523313)
chr5 (171-216)||(36177364-36177409)
chr5 (171-225)||(4857472-4857526)
chr5 (183-225)||(5151178-5151220)
chr5 (171-221)||(15898445-15898495)
chr5 (171-225)||(25017652-25017706)
chr5 (171-225)||(30317821-30317875)
chr5 (171-225)||(30348055-30348109)
chr5 (171-221)||(36750758-36750808)
chr5 (171-225)||(38972105-38972159)
chr5 (171-225)||(40979190-40979244)
chr5 (171-225)||(41521260-41521314)
chr5 (171-212)||(18729664-18729705)
chr5 (171-216)||(19089008-19089053)
chr5 (171-220)||(27798228-27798277)
chr5 (171-211)||(3247266-3247306)
[»] chr8 (35 HSPs)
chr8 (171-225)||(14577632-14577686)
chr8 (171-225)||(41087046-41087100)
chr8 (164-225)||(1177136-1177197)
chr8 (171-225)||(23399757-23399811)
chr8 (171-225)||(36437573-36437627)
chr8 (171-225)||(40517812-40517866)
chr8 (170-223)||(37600870-37600923)
chr8 (171-223)||(12762914-12762966)
chr8 (171-223)||(31746387-31746439)
chr8 (164-224)||(39543641-39543701)
chr8 (171-223)||(40602023-40602075)
chr8 (171-222)||(885533-885584)
chr8 (171-225)||(10709386-10709440)
chr8 (164-222)||(14846904-14846962)
chr8 (171-217)||(38202980-38203026)
chr8 (171-225)||(38761338-38761392)
chr8 (171-225)||(45203830-45203884)
chr8 (164-217)||(38773336-38773389)
chr8 (171-224)||(45183842-45183895)
chr8 (171-223)||(24276539-24276591)
chr8 (171-223)||(25888667-25888719)
chr8 (171-223)||(36309578-36309630)
chr8 (164-211)||(24512161-24512208)
chr8 (171-217)||(16002711-16002757)
chr8 (171-225)||(23280723-23280777)
chr8 (171-225)||(25198361-25198415)
chr8 (171-225)||(30262518-30262572)
chr8 (171-225)||(40790860-40790914)
chr8 (183-225)||(40807991-40808033)
chr8 (171-225)||(45185247-45185301)
chr8 (171-224)||(27637-27690)
chr8 (164-217)||(57176-57229)
chr8 (172-221)||(5191533-5191582)
chr8 (171-224)||(43191458-43191511)
chr8 (171-211)||(31673668-31673708)
[»] scaffold0012 (1 HSPs)
scaffold0012 (164-225)||(99796-99857)
[»] scaffold0176 (1 HSPs)
scaffold0176 (185-225)||(20100-20140)
[»] scaffold0699 (1 HSPs)
scaffold0699 (171-223)||(7649-7701)
[»] scaffold1091 (1 HSPs)
scaffold1091 (171-225)||(1892-1946)
[»] scaffold0009 (1 HSPs)
scaffold0009 (168-225)||(25768-25824)


Alignment Details
Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39197293 - 39197151
Alignment:
Q  1 catgtataataaatgattctatcatactagaaaaaacttttatagttgattgaaatcnnnnnnnnnnnngttgaaactttttcttatatcgagaactaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||| ||||||||||||||||||||||||||    
T  39197293 catgtataataaatgattctatcatactagaaaaaacttttatagttgattgaaatcttttttttttttgttgtaactttttcttatatcgagaactaaa 39197194  T
Q  101 gggagcactaacttttactccatcggtccatctatgtaagtcct 144  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  39197193 gggagcactaacttttact-catccgtccatctatgtaagtcct 39197151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 39197074 - 39197015
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  39197074 attgtcttttgtttgtatgtgtattaaatttgacttttcaaattttaaaacaagttagta 39197015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 20262434 - 20262373
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||    
T  20262434 attgttatttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagatagtagt 20262373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 36513350 - 36513306
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaattt 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36513350 attgttttttgtttgtatatgtattaaatttgatttttcatattt 36513306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 16070502 - 16070557
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||    
T  16070502 ttttgtttatatatgtattaaatttgacttttcatatttcaatacaagttagtagt 16070557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 20293812 - 20293873
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| | |||| ||||||| |||||||||||||    
T  20293812 attgtcttttgtttgtatttgtattaaatttgactattcatatttcaatacaagttagtagt 20293873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 43509146 - 43509207
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||| | |||||||||||||| |||| ||||||||    
T  43509146 attgtcttttgtttgtatgtgtattaaatttaacttttcaaatttcaagacaaattagtagt 43509207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 41945806 - 41945754
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||| |||||    
T  41945806 tttgtttgtatatgtattaaatttgacttttcatatttcaagacaagatagta 41945754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 20185690 - 20185635
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  20185690 ttttgtttgtatttgtattaaatttgacttttcatatttcaagacaaattagtagt 20185635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 5168051 - 5168105
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| |||||||| ||||||| ||||| |||||||    
T  5168051 tttgtttgtatgtgtattaaatttaatttttcatatttcaatacaagctagtagt 5168105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 20116522 - 20116568
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  20116522 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaag 20116568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 20291412 - 20291466
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  20291412 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagt 20291466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 22750875 - 22750821
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  22750875 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaacttagtagt 22750821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 25477297 - 25477351
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  25477297 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 25477351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 30153251 - 30153201
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  30153251 tttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 30153201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 33246530 - 33246476
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| ||| || ||||||| |||||||||||||    
T  33246530 tttgtttgtatgtgtattaaatttgactttacatatttcaagacaagttagtagt 33246476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 52226091 - 52226145
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  52226091 tttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 52226145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 54438586 - 54438636
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| |||||||||||||| |||||| ||||||||||||| |||||||    
T  54438586 tttgtatgtgtattaaatttgacttttcatatttcaaaacaagatagtagt 54438636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 52198762 - 52198707
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||| ||||||| |||||| ||||||| |||| | |||||||||||||||||||||    
T  52198762 ttttatttgtatgtgtattgaatttgactttttatatttcaaaacaagttagtagt 52198707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 3113450 - 3113492
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| |||||||||||| ||||||||    
T  3113450 tgtattaaatttgacttttcatatttcaaaacaaattagtagt 3113492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 5448734 - 5448788
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | | |||||||||    
T  5448734 tttgtttgtatgtgtattaaatttgacttttcatatttcaagatatgttagtagt 5448788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 7002255 - 7002305
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||||||||| ||| ||||||||||||||||| ||||||| | |||||||    
T  7002255 tttgtttgtatgtgtgttaaatttgatttttcatatttcaagataagttag 7002305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 10602231 - 10602189
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| |||||||||||| ||||||||    
T  10602231 tgtattaaatttgacttttcatatttcaaaacaaattagtagt 10602189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 19654504 - 19654554
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||||||||||||   |||||| |||||||||||||||||||||    
T  19654504 tttgtatgtgtattaaatttatcttttcatatttcaaaacaagttagtagt 19654554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 34643466 - 34643520
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| |||||||| ||||||| | || ||||||||    
T  34643466 tttgtttgtatgtgtattaaatttaatttttcatatttcaagataaattagtagt 34643520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 38136427 - 38136481
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||| | |||||||||||||| |||||||  ||||||||||||    
T  38136427 tttgtttgtatgtgtaattaatttgatttttcatatttcaaggcaagttagtagt 38136481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 43800880 - 43800934
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||| ||||||| |||||| ||||||| ||||||| |||||    
T  43800880 tttgtttgtatgtgtatttaatttgacttttcatatttcaagacaagttggtagt 43800934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 56373377 - 56373323
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||| | ||||||||||||| ||||||| ||||||| |||||||| ||||    
T  56373377 tttgtttgtctgtgtattaaatttgttttttcatatttcaagacaagttattagt 56373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 5416909 - 5416848
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||| | ||||| |||||    
T  5416909 attgtgttttgtttgtatgtgtattaaatttgacttttaatatttcaagataagtttgtagt 5416848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 20791998 - 20792039
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    |||| |||||||||||||||||||||| |||||| |||||||    
T  20791998 ttttatttgtatatgtattaaatttgagttttcatatttcaa 20792039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 26170296 - 26170251
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    |||||||||||||||||||||| |||||| ||||||| | ||||||    
T  26170296 tttgtatatgtattaaatttgacttttcatatttcaagataagtta 26170251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 37175062 - 37175005
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||| |||||||||||| ||||||||||| || |||||| ||||||| | |||||||    
T  37175062 attgtcttttgtttgtatgtgtattaaattagacttttcatatttcaagataagttag 37175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 41459652 - 41459713
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||| ||| ||| |||||||||||||| |||||| ||||||  |||||||||||||    
T  41459652 attgtcttttatttatatgtgtattaaatttgacttttcatatttcatgacaagttagtagt 41459713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 41920078 - 41920017
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| || | ||||||||| |||||| ||||||| | |||||||||||    
T  41920078 attgtcttttgtttgtatgtgaaataaatttgacttttcatatttcaagataagttagtagt 41920017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 51787843 - 51787888
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  51787843 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaa 51787888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 5536569 - 5536601
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttca 203  Q
    ||||||||||| |||||||||||||||||||||    
T  5536569 tttgtttgtatgtgtattaaatttgatttttca 5536601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 5932958 - 5933010
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||| ||| |||||||||||| ||||||  |||||||| |||||||||||    
T  5932958 tttgtttttatgtgtattaaatttaatttttttaatttcaagacaagttagta 5933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 25841983 - 25842019
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  25841983 tttgtatgtgtattaaatttgatttttcatatttcaa 25842019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 28116538 - 28116498
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  28116538 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 28116498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 32107910 - 32107954
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaattt 208  Q
    ||||| |||| |||||||||||||||||||||| |||||| ||||    
T  32107910 attgtcttttatttgtatatgtattaaatttgacttttcatattt 32107954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 11459225 - 11459279
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11459225 tttgtttgtatatgtattaaatttgatttttcaaatttcaagacaagttagtagt 11459279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 375378 - 375324
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  375378 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagt 375324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 12498303 - 12498249
Alignment:
Q  169 tttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  12498303 tttttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagta 12498249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 23464759 - 23464809
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23464759 tttgtatatgtattaaatttgacttttcatatttcaaaacaagttagtagt 23464809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 24774930 - 24774991
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  24774930 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 24774991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 14527695 - 14527746
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  14527695 tttgtttgtatgtatattaaatttgatttttcatatttcaaaacaagttagt 14527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 8065105 - 8065051
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||| |||||||||||| ||||||| |||||||||||||    
T  8065105 tttgtttgtatgtgtattaactttgatttttcatatttcaagacaagttagtagt 8065051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 43650099 - 43650157
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||| ||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  43650099 attgttctttgtttgtatgtgtattaaatttgaccttttaaatttcaaaacaagttagt 43650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 25731220 - 25731165
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| | ||||||||||||||||||| |||| || |||||||||||||    
T  25731220 ttttgtttgtatgtatattaaatttgatttttcatattttaagacaagttagtagt 25731165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 2048863 - 2048809
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||| | ||||||| |||||||||||||    
T  2048863 tttgtttgtatgtgtattaaatttgactttttatatttcaagacaagttagtagt 2048809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 3237795 - 3237849
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  3237795 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 3237849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 27297649 - 27297703
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  27297649 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 27297703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 28190670 - 28190724
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||||||| ||| |||||||| ||||||| |||| ||||||||    
T  28190670 tttgtttgtatatgtattaagtttaatttttcatatttcaagacaatttagtagt 28190724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 32677547 - 32677601
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||| ||||| |||||||||||||||| ||||||| |||| ||||||||    
T  32677547 tttgtttgtacatgtactaaatttgatttttcatatttcaagacaaattagtagt 32677601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 44421521 - 44421575
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||| ||||| |||||| || |||||||||||||    
T  44421521 tttgtttgtatgtgtattaaatttgtttttttaaattttaagacaagttagtagt 44421575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 44424667 - 44424721
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  44424667 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 44424721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 2131828 - 2131880
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||||||||| |||||||||||||| |||||| |||| || ||||||||||    
T  2131828 ttttgtttgtatctgtattaaatttgacttttcatatttaaagacaagttagt 2131880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 13534487 - 13534531
Alignment:
Q  181 tatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||    
T  13534487 tatgtattaaatttgacttttcatatttcaagacaagttagtagt 13534531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 38982107 - 38982059
Alignment:
Q  168 ttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    |||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  38982107 ttttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaa 38982059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 43119402 - 43119362
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| ||||||||||||||||||||| |||||||    
T  43119402 tttgtttgtatgtgtattaaatttgatttttcatatttcaa 43119362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 12417658 - 12417619
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttca 203  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  12417658 attgttttttatttgtatgtgtattaaatttgatttttca 12417619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Complemental strand, 12429718 - 12429679
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttca 203  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  12429718 attgttttttatttgtatgtgtattaaatttgatttttca 12429679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 247732 - 247786
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| | |||||||||||| |||||| || |||| |||||||||||||    
T  247732 tttgtttgtatgtatattaaatttgacttttcatatctcaagacaagttagtagt 247786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 1246453 - 1246399
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttga-tttttcaaatttcaaaacaag 217  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||||||| |||||    
T  1246453 attgttctttgtttgtatgtgtattaaatttgactttttcatatttcaagacaag 1246399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 16808856 - 16808802
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| | ||||||| || |||||||| ||||||| |||||||||||||    
T  16808856 tttgtttgtatgtatattaaaattaatttttcatatttcaagacaagttagtagt 16808802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 16848137 - 16848083
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| | ||||||| || |||||||| ||||||| |||||||||||||    
T  16848137 tttgtttgtatgtatattaaaattaatttttcatatttcaagacaagttagtagt 16848083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 21012925 - 21012979
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||   |||||||||||| |||| | |||||||||||||||||||||    
T  21012925 tttgtttgtatgcatattaaatttgactttttatatttcaaaacaagttagtagt 21012979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 34330074 - 34330128
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| | |||||| ||||||| ||||| |||||||    
T  34330074 tttgtttgtatgtgtattaaatttaacttttcatatttcaagacaagatagtagt 34330128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 37355108 - 37355154
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||    
T  37355108 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaag 37355154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 41665782 - 41665836
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| | |||||| ||||||| |||||||| ||||    
T  41665782 tttgtttgtatgtgtattaaatttaacttttcatatttcaagacaagttaatagt 41665836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 2917141 - 2917080
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||| | |||| | |||| || |||||||||||||    
T  2917141 attgtcttttgtttgtatgtgtattaaatttaactttttatattttaagacaagttagtagt 2917080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 6275608 - 6275551
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttga-tttttcaaatttcaaaacaagtta 220  Q
    ||||| ||||||||||||||||||||||||| | | ||||| ||||||| ||||||||    
T  6275608 attgtcttttgtttgtatatgtattaaatttaactatttcatatttcaagacaagtta 6275551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 35178833 - 35178772
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||| ||||||| |||||||||||||| |||||| |||||||  |||| |||||||    
T  35178833 attgtcttttatttgtatttgtattaaatttgacttttcatatttcaaggcaagatagtagt 35178772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 40346121 - 40346060
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||| ||||||| |||||||||||||| |||||| |||||||  |||||| |||||    
T  40346121 attgtcttttatttgtatgtgtattaaatttgacttttcatatttcaaggcaagtttgtagt 40346060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 44274538 - 44274501
Alignment:
Q  185 tattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  44274538 tattaaatttgacttttcaaatttcaagacaagttagt 44274501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 2521340 - 2521280
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||| |||||||||||| |||||||||||||| ||||   ||||||| |||| |||||||    
T  2521340 attgtcttttgtttgtatgtgtattaaatttgactttttgtatttcaagacaaattagtag 2521280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 11071740 - 11071784
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaaca 215  Q
    |||| |||||| |||||||||||||| |||||| |||||||||||    
T  11071740 tttgcttgtatgtgtattaaatttgacttttcatatttcaaaaca 11071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 31644475 - 31644443
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttca 203  Q
    ||||||||||| |||||||||||||||||||||    
T  31644475 tttgtttgtatgtgtattaaatttgatttttca 31644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 38449747 - 38449707
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||||| |||| |||||||    
T  38449747 tttgtttgtatgtgtattaaatttgattattcatatttcaa 38449707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 5457252 - 5457313
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  5457252 attgttctttgtttgtaaatgtattaaatttgattttttaaatttcaaaacaagttagtagt 5457313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 1763885 - 1763939
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  1763885 tttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagt 1763939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 12514626 - 12514568
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| ||||||||||    
T  12514626 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagt 12514568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 20523045 - 20523093
Alignment:
Q  172 ttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  20523045 ttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagtta 20523093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 31153029 - 31152973
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    |||||| ||||||||||| |||||||||||||| |||||| |||| |||||||||||    
T  31153029 attgttatttgtttgtatgtgtattaaatttgacttttcatattttaaaacaagtta 31152973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 12503654 - 12503595
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||| |||||||||||| |||| ||||||||| |||||| ||||||| |||||||||||    
T  12503654 attgtcttttgtttgtatgtgtagtaaatttgacttttcatatttcaagacaagttagta 12503595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 30466003 - 30465948
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  30466003 ttttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagt 30465948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 34513252 - 34513198
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  34513252 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 34513198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 9461365 - 9461418
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||| ||||||||    
T  9461365 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaggttagtag 9461418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 30248944 - 30248988
Alignment:
Q  181 tatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||    
T  30248944 tatgtattaaatttgacttttcatatttcaagacaagttagtagt 30248988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 31536083 - 31536138
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||| ||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  31536083 ttttgtttatatgtgtattaaatttgacttttcatatttcaagataagttagtagt 31536138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 197485 - 197431
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| ||||||  ||||| || |||||||||||||    
T  197485 tttgtttgtatgtgtattaaatttaattttttcaattttaagacaagttagtagt 197431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 6791448 - 6791494
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||| ||||||||| |||||    
T  6791448 tttgtttgtatgtgtattaaatttgactttttaaatttcaagacaag 6791494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 7365563 - 7365613
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||||||| ||||||||||||| ||||||||| |||||| ||||    
T  7365563 tttgtatttgtattatatttgatttttcatatttcaaaataagttaatagt 7365613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 11082155 - 11082197
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  11082155 tgtattaaatttgaattttcatatttcaagacaagttagtagt 11082197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 31039218 - 31039272
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| || ||| ||||||| |||||| ||||||| |||||||||||||    
T  31039218 tttgtttgtatgtgcatttaatttgacttttcatatttcaagacaagttagtagt 31039272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 31945946 - 31945892
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||| ||| || ||||||| |||||||||||||    
T  31945946 tttgtttatatgtgtattaaatttgactttacatatttcaagacaagttagtagt 31945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 10669315 - 10669266
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaa 213  Q
    |||||| |||| |||||| |||||||||||||| |||||| |||||||||    
T  10669315 attgttctttgattgtatctgtattaaatttgacttttcatatttcaaaa 10669266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 16327195 - 16327244
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    ||||||||||| |||||||||||| | |||||| ||||||| ||||||||    
T  16327195 tttgtttgtatttgtattaaatttaacttttcatatttcaagacaagtta 16327244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 16350593 - 16350642
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    ||||||||||| |||||||||||| | |||||| ||||||| ||||||||    
T  16350593 tttgtttgtatttgtattaaatttaacttttcatatttcaagacaagtta 16350642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 3729494 - 3729546
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||| | ||| || ||||||| |||||||||||    
T  3729494 tttgtttgtatgtgtattaaatttaactttacatatttcaagacaagttagta 3729546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 9e-20; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 14645931 - 14645870
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  14645931 attgttatttgtttgtatgtgtattaaatttgatttttcaaatttcaagacaagttagtagt 14645870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 13084394 - 13084340
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    |||||||||||| |||||||||||||| ||||||||||| || ||||||||||||    
T  13084394 ttttgtttgtatgtgtattaaatttgacttttcaaattttaacacaagttagtag 13084340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 35765667 - 35765625
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  35765667 tgtattaaatttgacttttcaaatttcaaaacaagttagtagt 35765625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 50363098 - 50363152
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  50363098 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 50363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 50525011 - 50524957
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||    
T  50525011 tttgtttgtatgtgtattaaatttgacttttgaaatttcaagacaagttagtagt 50524957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 11388185 - 11388246
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  11388185 attgtattttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagt 11388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 22659650 - 22659705
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| |||||||||||| | |||||| |||||||||||| ||||||||    
T  22659650 ttttgtttgtatgtgtattaaatttaacttttcatatttcaaaacaaattagtagt 22659705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 37729065 - 37729010
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| |||||||||||||| || ||| ||||||||| |||||||||||    
T  37729065 ttttgtttgtatgtgtattaaatttgacttctcatatttcaaaataagttagtagt 37729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 46048593 - 46048648
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagtg 226  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||||||    
T  46048593 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagtg 46048648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 12077778 - 12077732
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||    
T  12077778 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaag 12077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 20945335 - 20945281
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||| || |||||||||||||    
T  20945335 tttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagtagt 20945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 26517246 - 26517196
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  26517246 tttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 26517196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 40645738 - 40645799
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| ||||||||| ||| ||||||| ||||||| |||||||| ||||    
T  40645738 attgtcttttgtttgtatgtgtattaaacttggtttttcatatttcaagacaagttattagt 40645799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 46435757 - 46435712
Alignment:
Q  181 tatgtattaaatttgatttttcaaatttcaaa-acaagttagtagt 225  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||    
T  46435757 tatgtattaaatttgacttttcaaatttcaaagacaagttagtagt 46435712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 5504608 - 5504556
Alignment:
Q  173 tgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  5504608 tgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 5504556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 31826256 - 31826315
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||| ||||||||||| ||||||||||||||||||  | ||| ||| |||||||||||    
T  31826256 attgttctttgtttgtatgtgtattaaatttgattttgtatattgcaagacaagttagta 31826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 42891490 - 42891541
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| | |||||||||||| ||||||||||| || ||||||||||    
T  42891490 tttgtttgtatgtatattaaatttgacttttcaaatttaaagacaagttagt 42891541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 44083698 - 44083749
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | ||||||||    
T  44083698 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagt 44083749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 831395 - 831341
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| ||||||||||||||||||||| ||||||| | |||||| ||||    
T  831395 tttgtttatatgtgtattaaatttgatttttcatatttcaatataagttattagt 831341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 26243543 - 26243593
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | |||||||    
T  26243543 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttag 26243593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 31474495 - 31474549
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||  |||||||||||| || |||| ||||||||    
T  31474495 tttgtttgtatgtgtattaaatttagtttttcaaattttaagacaaattagtagt 31474549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 31819477 - 31819531
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||  |||||||    
T  31819477 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaatatagtagt 31819531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 33287937 - 33287991
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||| | |||||||||||||| |||| | ||||||| |||||||||||||    
T  33287937 tttgtttgtttgtgtattaaatttgactttttatatttcaagacaagttagtagt 33287991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 35055857 - 35055911
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||| |||||| |||||||||||||| |||| | ||||||| |||||||||||||    
T  35055857 tttgcttgtatgtgtattaaatttgactttttatatttcaatacaagttagtagt 35055911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 39617285 - 39617239
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||    
T  39617285 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaag 39617239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 39931952 - 39932006
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| | |||||| |||| || |||||||||||||    
T  39931952 tttgtttgtatgtgtattaaattttagttttcatattttaagacaagttagtagt 39932006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 41308811 - 41308757
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||  |||||| ||||||| |||||||||||||    
T  41308811 tttgtttatatgtgtattaaatttggcttttcatatttcaagacaagttagtagt 41308757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 48309515 - 48309569
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||| |||||||||| |||||| ||||||| | |||||||||||    
T  48309515 tttgtttgtatgtgtgttaaatttgacttttcatatttcaagataagttagtagt 48309569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 51263153 - 51263207
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||| || | |||||||||||    
T  51263153 tttgtttgtatgtgtattaaatttgacttttcatatttaaagataagttagtagt 51263207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 26998959 - 26999020
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||  ||||||||||||||||||||| |||| || | ||| |||||||    
T  26998959 attgtcttttgtttgtacgtgtattaaatttgatttttcatattttaagagaagatagtagt 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 28477449 - 28477510
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| || ||||||||||| | |||| ||||||| |||| ||||||||    
T  28477449 attgtcttttgtttgtatgtgcattaaatttgactattcatatttcaagacaaattagtagt 28477510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 29611904 - 29611957
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||||||||| ||||| ||||||||  ||||| ||||||| |||||||||||    
T  29611904 ttttgtttgtatgtgtatcaaatttgacatttcatatttcaagacaagttagta 29611957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 35145302 - 35145347
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  35145302 tttgtttgtatttgtattaaatttgacttttcatatttcaagacaa 35145347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 26043090 - 26043130
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  26043090 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 26043130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 31531149 - 31531109
Alignment:
Q  185 tattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||| | |||||||||||||| |||||||||||||    
T  31531149 tattaaatttaacttttcaaatttcaagacaagttagtagt 31531109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 19236107 - 19236046
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  19236107 attgttctttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagt 19236046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 21809680 - 21809626
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  21809680 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagt 21809626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 4089534 - 4089479
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  4089534 ttttgtttgtatatgtattaaatttgacttttcatatttcaagacaagatagtagt 4089479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 1324780 - 1324834
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  1324780 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 1324834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 10408601 - 10408547
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||    
T  10408601 tttgtttgtatgtgtattaaatttgatttttcatatttcaatgcaagttagtagt 10408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 42983654 - 42983593
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| || ||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  42983654 attgtcttatgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 42983593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 25750440 - 25750492
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||    
T  25750440 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaaggtagta 25750492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 5334428 - 5334377
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||| |||||    
T  5334428 tttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaaattagt 5334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 20123522 - 20123577
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaa-acaagttagtagt 225  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||    
T  20123522 tttgtttgtatgtgtattaaatttgaattttcaaatttcaaagacaagttattagt 20123577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 2276610 - 2276556
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||||||||||| | |||||| ||||    
T  2276610 tttgtttgtatgtgtattaaatttgacttttcaaatttcaagataagttactagt 2276556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 21388314 - 21388368
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| ||||||||||| || | |||||||||||    
T  21388314 tttgtttgtatgtgtattaaatttgacttttcaaattttaagataagttagtagt 21388368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 26201001 - 26200947
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| | |||||| |||| ||||||||||||||||    
T  26201001 tttgtttgtatgtgtattaaatttaacttttcatattttaaaacaagttagtagt 26200947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 48610176 - 48610118
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||    
T  48610176 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagt 48610118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 24700736 - 24700675
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| ||||||||  |||| |||||| ||||||||| |||||||||||    
T  24700736 attgttctttgtttgtatgtgtattaatgttgacttttcatatttcaaaataagttagtagt 24700675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 28038924 - 28038871
Alignment:
Q  168 ttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    |||||||||||||| |||||||||||| | |||||| ||||||| |||||||||    
T  28038924 ttttttgtttgtatttgtattaaatttaacttttcatatttcaagacaagttag 28038871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 37673802 - 37673855
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| |||||    
T  37673802 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaag 37673855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 46783881 - 46783820
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| ||||||| |||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  46783881 attgtcttttgttcgtatgtgtattaaatttgacttttcatatttcaagataagttagtagt 46783820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 21752600 - 21752644
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaaca 215  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  21752600 tttgtttgtatgtgtattaaatttgacttttcacatttcaaaaca 21752644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 37491652 - 37491612
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  37491652 tttgtttgtatatgtattaaatttgacttttcatatttcaa 37491612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 43601198 - 43601146
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||| ||| |||||||||||||| |||||| ||||||| |||||||||||    
T  43601198 tttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagta 43601146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 44648755 - 44648703
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||| ||| |||||||| ||||||||||||||||||||| ||||||| ||||    
T  44648755 attgtctttagtttgtatgtgtattaaatttgatttttcatatttcaagacaa 44648703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 43465183 - 43465136
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||    
T  43465183 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa 43465136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 21392927 - 21392873
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    |||||||||||| |||||||||||||| |||| | ||||||| ||| ||||||||    
T  21392927 ttttgtttgtatgtgtattaaatttgactttttatatttcaagacatgttagtag 21392873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 29636074 - 29636020
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||| ||||| |||||||| ||||||| |||||||||||||    
T  29636074 tttgtttttatgtgtatttaatttaatttttcatatttcaagacaagttagtagt 29636020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 29723533 - 29723587
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||| |||| |||||||||||| |||||| ||||||| ||||| |||||||    
T  29723533 tttgtttgcatatatattaaatttgacttttcatatttcaacacaagatagtagt 29723587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 35128456 - 35128502
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||    
T  35128456 tttgtttgtatgtgtattaaatttgaattttcatatttcaagacaag 35128502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 36726195 - 36726153
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| ||||||||||||||| |||||    
T  36726195 tgtattaaatttgacttttcatatttcaaaacaagttggtagt 36726153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 37048107 - 37048161
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||| | | |||| ||||||| |||||||||||||    
T  37048107 tttgtttgtatgtgtattaaatttaactattcatatttcaatacaagttagtagt 37048161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 40263783 - 40263837
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | ||| |||||||    
T  40263783 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagatagtagt 40263837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 10685157 - 10685202
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  10685157 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaa 10685202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 6376166 - 6376118
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtt 219  Q
    ||||||||||| |||||||||||| | ||||||||||| || |||||||    
T  6376166 tttgtttgtatgtgtattaaatttaacttttcaaattttaagacaagtt 6376118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 31373731 - 31373691
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  31373731 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 31373691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 35960449 - 35960501
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||||||||| ||| |||||||||| |||||| ||||||| ||| ||||||    
T  35960449 ttttgtttgtatgtgtgttaaatttgacttttcatatttcaagacaggttagt 35960501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 38729725 - 38729673
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||||||||| |||||||||||| |||||||| |||| || ||||| ||||    
T  38729725 ttttgtttgtatgtgtattaaattttatttttcatattttaagacaagctagt 38729673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 42993221 - 42993181
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    |||||| |||| ||||||||||||||||||||| |||||||    
T  42993221 tttgttagtatgtgtattaaatttgatttttcatatttcaa 42993181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 49100743 - 49100783
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  49100743 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 49100783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 4817945 - 4817884
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  4817945 attgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagt 4817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 4829745 - 4829684
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  4829745 attgtcttttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaagttagtagt 4829684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 44652900 - 44652839
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  44652900 attgttctttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagt 44652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 46591173 - 46591225
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  46591173 tttgtttctatgtgtattaaatttgatttttcaaatttcaagacaagttagta 46591225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 51997026 - 51997081
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaa-acaagttagtagt 225  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  51997026 tttgtttgtatgtgtattaaatttgacttttcaaatttcaaagacaagttagtagt 51997081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 23982624 - 23982570
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||||||||||||| |||||| ||||||| | |||||||||||    
T  23982624 tttgtttgtatatgtattaaatttgacttttcatatttcaagataagttagtagt 23982570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 47070993 - 47070939
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  47070993 tttgtttgtatgcgtattaaatttgatttttcatatttcaagacaagttagtagt 47070939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 47643611 - 47643665
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||| || |||||||||||||| |||||||||||||| |||||||||||||    
T  47643611 tttgtttgcatgtgtattaaatttgacttttcaaatttcaagacaagttagtagt 47643665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 51390569 - 51390515
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  51390569 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 51390515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 5322062 - 5322001
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||||||||||||| |||| |||||| ||||||| ||||| |||||||    
T  5322062 attgttatttgtttgtatatgtattaaaattgacttttcatatttcaagacaagatagtagt 5322001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 20564839 - 20564900
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| ||||||||| || |||||||||||||| |||||| ||||||| |||||||||||||    
T  20564839 attgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 20564900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 15457847 - 15457795
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||| ||||||    
T  15457847 tttgtttgtatgtgtattaaatttgatttttcatatttcagaacaaattagta 15457795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 47754674 - 47754622
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| ||||||||| |||||||||    
T  47754674 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaataagttagta 47754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 48721900 - 48721846
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  48721900 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 48721846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 2342968 - 2343029
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||| | |||||||||||||| |||||| |||||||  ||||||||||||    
T  2342968 attgtcttttgtttgtgtgtgtattaaatttgacttttcatatttcaaggcaagttagtagt 2343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 3143467 - 3143528
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||| ||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  3143467 attgtcttttgtttttatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 3143528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 3143775 - 3143714
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| | |||||||| | |||||||| ||||||| |||||||||||||    
T  3143775 attgtcttttgtttgtatgtttattaaatattatttttcatatttcaagacaagttagtagt 3143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 5085128 - 5085067
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| |||||||||||||| |||||| ||||||| | ||| |||||||    
T  5085128 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaagagaagatagtagt 5085067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 15179481 - 15179534
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||||||| |||||||||||||| |||||  ||||||| ||||||||||||    
T  15179481 tttgtttgtatgtgtattaaatttgacttttcgtatttcaagacaagttagtag 15179534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 32152222 - 32152283
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||| ||||||||||| |||||||||||||| |||||| |||| || | |||||||||||    
T  32152222 attgttatttgtttgtatgtgtattaaatttgacttttcatattttaagataagttagtagt 32152283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 4081997 - 4082049
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||| ||||| ||||||||||||||||||||| |||| || |||||||||||    
T  4081997 tttgtctgtatgtgtattaaatttgatttttcatatttaaagacaagttagta 4082049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 13723510 - 13723458
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | |||||||||    
T  13723510 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagta 13723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 35366023 - 35365967
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||| || ||||||||    
T  35366023 attgtcttttgtttgtatgtgtattaaatttgacttttcatattttaagacaagtta 35365967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 3072207 - 3072262
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||| ||| ||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  3072207 ttttttttttatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 3072262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 24415071 - 24415126
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagtg 226  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||| |||| ||||    
T  24415071 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaaattagcagtg 24415126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 29140686 - 29140635
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| ||||    
T  29140686 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagt 29140635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 4813494 - 4813444
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||||||||| ||| |||||||||| |||||| ||||||||| |||||||    
T  4813494 tttgtttgtatgtgtgttaaatttgacttttcatatttcaaaataagttag 4813444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 8984693 - 8984639
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | || ||||||||    
T  8984693 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataaattagtagt 8984639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 222
Target Start/End: Original strand, 16582597 - 16582655
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||| |||| ||||||| |||||||||||||| |||||| ||||||| ||||| ||||    
T  16582597 attgtcttttatttgtatgtgtattaaatttgacttttcatatttcaagacaagatagt 16582655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 28679856 - 28679814
Alignment:
Q  169 tttttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||||| ||||||||||||||||||| | |||||||    
T  28679856 tttttgtttgtatgtgtattaaatttgatttttaatatttcaa 28679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 31305389 - 31305443
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | || ||||||||    
T  31305389 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataaattagtagt 31305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 44395606 - 44395660
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| | ||||||||||||||||||| ||||||| ||| |||| ||||    
T  44395606 tttgtttgtatgtatattaaatttgatttttcatatttcaagacatgttaatagt 44395660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 46732988 - 46732938
Alignment:
Q  175 tttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  46732988 tttgtatgtgtattaaatttgacttttcatatttcaagacaaattagtagt 46732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 25063281 - 25063334
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||||||| |||||||||||| | |||||| ||||||  ||||||||||||    
T  25063281 tttgtttgtatgtgtattaaatttcacttttcatatttcacgacaagttagtag 25063334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 34331945 - 34331998
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||||| ||| |||||||||||||| |||||| ||||||| | |||||||||    
T  34331945 ttttgtttatatgtgtattaaatttgacttttcatatttcaagagaagttagta 34331998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 52141208 - 52141155
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||||||||| |||||||||||||| |||| | |||| || |||||||||||    
T  52141208 ttttgtttgtatgtgtattaaatttgactttttatattttaagacaagttagta 52141155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 10160783 - 10160823
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  10160783 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 10160823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 15911584 - 15911532
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||| |||  ||||| ||||||| |||||||||||    
T  15911584 tttgtttgtatgtgtattaaatgtgacatttcatatttcaagacaagttagta 15911532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 44335378 - 44335418
Alignment:
Q  186 attaaatttgatttttcaaatttcaaa-acaagttagtagt 225  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  44335378 attaaatttgacttttcaaatttcaaagacaagttagtagt 44335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 43454053 - 43454105
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  43454053 ttttgtttgtatgtgtattaaatttgatttttcaaatttcaagacaagttagt 43454105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 20946159 - 20946213
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  20946159 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaagttagtagt 20946213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 27587910 - 27587964
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  27587910 tttgtatgtatgtgtattaaatttgatttttcaaatttcaatacaagttagtagt 27587964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 16147 - 16093
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  16147 tttgtttgtatttgtattaaatttgacttttcacatttcaagacaagttagtagt 16093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 5845248 - 5845302
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  5845248 tttgtttgtatgtgtattaaatttgacttttcatatttcaatacaagttagtagt 5845302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 12895248 - 12895190
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||| || ||||||||||    
T  12895248 attgtcttttgtttgtatgtgtattaaatttgattttttaaattttaagacaagttagt 12895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 29866261 - 29866315
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  29866261 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 29866315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 9375678 - 9375617
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||||||||||| | ||||||||||||||||||| ||||||| | |||||||||||    
T  9375678 attgtcttttgtttgtatgtttattaaatttgatttttcatatttcaagataagttagtagt 9375617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 600837 - 600889
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||||||||||||||||||||||| | |||| || |||||||||||    
T  600837 tttgtttgtatatgtattaaatttgattttttatattttaagacaagttagta 600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 8717991 - 8717943
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtt 219  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||    
T  8717991 tttgtttgtatatgtattaaatttgacttttcatatttcaagacaagtt 8717943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 10934078 - 10934130
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  10934078 tttgtttgtatgtgtattaaatttgacttttcatatttcaatacaagttagta 10934130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 225
Target Start/End: Complemental strand, 32401487 - 32401432
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| ||||||||||||||||||||| |||| || ||||||| |||||    
T  32401487 ttttgtttgtatgtgtattaaatttgatttttcatattttaagacaagttggtagt 32401432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 36347640 - 36347581
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||| ||||||||||||| |||||||||||||| | |||| ||||||| |||||||||||    
T  36347640 attgatttttgtttgtatgtgtattaaatttgactattcacatttcaagacaagttagta 36347581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 731985 - 731935
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    |||||||||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  731985 ttttgtttgtatgtgtattaaatttgttttttcatatttcaagacaagtta 731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 3559059 - 3559005
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||    
T  3559059 tttgtttgtatgtgtattaaatttgacttttcatatttcaagataagttagtagt 3559005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 4738702 - 4738756
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  4738702 tttgtttttatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 4738756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 35569037 - 35568983
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||| ||||||||    
T  35569037 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaaattagtagt 35568983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 10523313 - 10523252
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| ||| |||||||||||||| | || | ||||||| |||||||||||||    
T  10523313 attgttttttgtttttatgtgtattaaatttgactatttatatttcaagacaagttagtagt 10523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 36177364 - 36177409
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||    
T  36177364 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaacaa 36177409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 4857526 - 4857472
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||| || | |||||||||||    
T  4857526 tttgtttgtatgtgtattaaatttgacttttcatattttaagataagttagtagt 4857472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 5151220 - 5151178
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  5151220 tgtattaaatttgacttttcatatttcaagacaagttagtagt 5151178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 15898495 - 15898445
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||||||||| |||||||||||||   ||||||||||||| |||||||||    
T  15898495 tttgtttgtatgtgtattaaatttggcctttcaaatttcaagacaagttag 15898445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 25017706 - 25017652
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||| || |||||||| ||||    
T  25017706 tttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttaatagt 25017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 30317821 - 30317875
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||| | |||||||||||||| |||||| |||||||  ||||||||||||    
T  30317821 tttgtttgtgtgtgtattaaatttgacttttcatatttcaatgcaagttagtagt 30317875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 30348109 - 30348055
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||| | |||||||||||||| |||||| |||||||  ||||||||||||    
T  30348109 tttgtttgtgtgtgtattaaatttgacttttcatatttcaaggcaagttagtagt 30348055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 36750808 - 36750758
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    ||||||| ||| |||||||||||||| |||| | |||||||||||||||||    
T  36750808 tttgtttatatgtgtattaaatttgactttttatatttcaaaacaagttag 36750758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 38972159 - 38972105
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||| | ||||||| | |||||||||||    
T  38972159 tttgtttgtatgtgtattaaatttgactttttatatttcaagataagttagtagt 38972105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 40979244 - 40979190
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||| || ||||| |||||||    
T  40979244 tttgtttgtatgtgtattaaatttgacttttcatatttaaagacaagatagtagt 40979190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 41521260 - 41521314
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||| |||||| ||||||||| ||||| |||||    
T  41521260 tttgtttatatgtgtattaaatttgacttttcatatttcaaaataagtttgtagt 41521314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 18729664 - 18729705
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaa 212  Q
    ||||||||||| |||||||||||||| |||||| ||||||||    
T  18729664 tttgtttgtatgtgtattaaatttgacttttcatatttcaaa 18729705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 19089053 - 19089008
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaa 216  Q
    ||||||||||| |||||||||||||| |||||| |||| |||||||    
T  19089053 tttgtttgtatttgtattaaatttgacttttcatattttaaaacaa 19089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 27798228 - 27798277
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagtta 220  Q
    ||||||||||| |||||||| ||||| |||||| ||||||| ||||||||    
T  27798228 tttgtttgtatgtgtattaagtttgacttttcatatttcaagacaagtta 27798277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 3247306 - 3247266
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| |||||| |||||||    
T  3247306 tttgtttgtatgtgtattaaatttgacttttcatatttcaa 3247266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 14577686 - 14577632
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  14577686 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagt 14577632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 41087046 - 41087100
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  41087046 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaagttagtagt 41087100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 1177197 - 1177136
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  1177197 attgtcttttatttgtatgtgtattaaatttgatttttcatatttcaaaacaagatagtagt 1177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 23399811 - 23399757
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||    
T  23399811 tttgtttgtatgtgtattaaatttgacttttcatatttcaaaccaagttagtagt 23399757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 36437573 - 36437627
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  36437573 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 36437627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 40517812 - 40517866
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||| ||||||||| |||||||||||||    
T  40517812 tttgtttgtatgtgtattaaatttgactttttaaatttcaagacaagttagtagt 40517866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 37600923 - 37600870
Alignment:
Q  170 ttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    |||||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  37600923 ttttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagta 37600870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 12762914 - 12762966
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  12762914 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagttagta 12762966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 31746439 - 31746387
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  31746439 tttgtttgtatgtgtattaaatttgacttttcatatttcaaagcaagttagta 31746387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 39543701 - 39543641
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||| |||||||||||| |||||||||||||| |||||| || |||| ||||||||||||    
T  39543701 attgtcttttgtttgtatgtgtattaaatttgacttttcatatctcaagacaagttagtag 39543641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 40602075 - 40602023
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| ||||||||||||||||||||| |||||||  ||||||||||    
T  40602075 tttgtttgtatgtgtattaaatttgatttttcatatttcaatgcaagttagta 40602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 885533 - 885584
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||| |||||    
T  885533 tttgtttgtatgtgtattaaatttgacttttcaaatttcaagacaaattagt 885584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 10709386 - 10709440
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||| ||| |||||||||||||| | |||| |||||||||||||||||||||    
T  10709386 tttgtttttatctgtattaaatttgactattcatatttcaaaacaagttagtagt 10709440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 14846962 - 14846904
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagt 222  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||| ||||||||||    
T  14846962 attgtcttttgtttgtatgtgtattaaatttgactttttatatttcaagacaagttagt 14846904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 38203026 - 38202980
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| ||||||||||||||||||||| ||||||| |||||    
T  38203026 tttgtttgtatgtgtattaaatttgatttttcatatttcaagacaag 38202980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 38761392 - 38761338
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||    
T  38761392 tttgtttgtatgtgtattaaatttgacttttcatatttcaagacaagatagtagt 38761338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 45203830 - 45203884
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||  ||||||||||||| |||||| ||||||| |||||||||||||    
T  45203830 tttgtttgtatgcgtattaaatttgacttttcatatttcaagacaagttagtagt 45203884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 38773389 - 38773336
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||| |||||||||||| ||||| ||||||||||||||| ||||||| |||||    
T  38773389 attgtcttttgtttgtatgtgtatgaaatttgatttttcatatttcaagacaag 38773336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 45183895 - 45183842
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||| ||| |||||||||||||| ||||||||||| || ||||||||||||    
T  45183895 tttgtttatatgtgtattaaatttgacttttcaaatttgaagacaagttagtag 45183842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 24276591 - 24276539
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||| | ||| || |||||||||||||||||||    
T  24276591 tttgtttgtatgtgtattaaattttactttacatatttcaaaacaagttagta 24276539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 25888667 - 25888719
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||| ||||||    
T  25888667 tttgtttgtatgtgtattaaatttgatttttcatattttaagacaaattagta 25888719  T

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Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 36309630 - 36309578
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||||||| |||||||||||||| |||||| |||| || |||||||||||    
T  36309630 tttgtttgtatgtgtattaaatttgacttttcatattttaagacaagttagta 36309578  T

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Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 24512208 - 24512161
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||| |||||||||||| |||||||||||||| |||||| |||||||    
T  24512208 attgtcttttgtttgtatgtgtattaaatttgacttttcatatttcaa 24512161  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 16002757 - 16002711
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    ||||||||||| |||||||||||||| |||| | |||||||||||||    
T  16002757 tttgtttgtatttgtattaaatttgactttttatatttcaaaacaag 16002711  T

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Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 23280723 - 23280777
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| | ||||||||||||||||||| ||| |||  ||||||||||||    
T  23280723 tttgtttgtatgtttattaaatttgatttttcatattacaagccaagttagtagt 23280777  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 25198361 - 25198415
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||||| |||||||| |||||| ||||||| | |||||||||||    
T  25198361 tttgtttgtatgtgtataaaatttgacttttcatatttcaagataagttagtagt 25198415  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 30262572 - 30262518
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| ||| |||||| | | |||||||||||||| |||||||||||||    
T  30262572 tttgtttgtatgtgtcttaaatctaacttttcaaatttcaagacaagttagtagt 30262518  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 40790860 - 40790914
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||||| ||||||||| | |||| ||||||| |||| ||||||||    
T  40790860 tttgtttgtatatgtaataaatttgactattcatatttcaagacaacttagtagt 40790914  T

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Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 40808033 - 40807991
Alignment:
Q  183 tgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| |||||| ||||||| |||||||||||||    
T  40808033 tgtattaaatttgacttttcatatttcaagacaagttagtagt 40807991  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 45185301 - 45185247
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||| | ||||| ||||||||||| || |||||||||||||    
T  45185301 tttgtttgtatgtgtattcattttgacttttcaaattttaagacaagttagtagt 45185247  T

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Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 27637 - 27690
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||| | ||||||||||||||||||||| | ||| |||||||| |||||||    
T  27637 tttgtttatgtatgtattaaatttgattttttatattacaaaacaaattagtag 27690  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 57229 - 57176
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaag 217  Q
    |||||| ||| ||||||| |||||||||||||| |||||| ||||||| |||||    
T  57229 attgttctttatttgtatgtgtattaaatttgacttttcatatttcaagacaag 57176  T

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Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 5191582 - 5191533
Alignment:
Q  172 ttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttag 221  Q
    |||||| ||| ||||||||||||||||||||| ||||||| |||| ||||    
T  5191582 ttgtttatatgtgtattaaatttgatttttcatatttcaagacaatttag 5191533  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 43191511 - 43191458
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtag 224  Q
    ||||||||||| |||||||||||| | |||||| ||||||| | ||||||||||    
T  43191511 tttgtttgtatgtgtattaaatttaaattttcatatttcaagataagttagtag 43191458  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 31673668 - 31673708
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaa 211  Q
    ||||||||||| |||||||||||||| | ||||||||||||    
T  31673668 tttgtttgtatgtgtattaaatttgactattcaaatttcaa 31673708  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 99857 - 99796
Alignment:
Q  164 attgttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||| ||||||||| || |||||||||||||| |||||| ||||||| |||||||||||||    
T  99857 attgtcttttgtttgaatgtgtattaaatttgacttttcatatttcaagacaagttagtagt 99796  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 20100 - 20140
Alignment:
Q  185 tattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  20100 tattaaatttgacttttcaaatttcaaaacaagttagtagt 20140  T

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Target: scaffold0699 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 7649 - 7701
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagta 223  Q
    ||||||| ||| |||||||||||||| |||||| ||||||| |||||||||||    
T  7649 tttgtttatatgtgtattaaatttgacttttcatatttcaagacaagttagta 7701  T

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Target: scaffold1091 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 1946 - 1892
Alignment:
Q  171 tttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    ||||||||||| |||||||||||||| |||||| ||| ||| |||| ||||||||    
T  1946 tttgtttgtatgtgtattaaatttgacttttcatattgcaagacaaattagtagt 1892  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 25768 - 25824
Alignment:
Q  168 ttttttgtttgtatatgtattaaatttgatttttcaaatttcaaaacaagttagtagt 225  Q
    |||||||||||||| ||||||||||||||  ||||| ||||||| |||||| ||||||    
T  25768 ttttttgtttgtatgtgtattaaatttga-ctttcatatttcaagacaagtgagtagt 25824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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