View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14312_high_12 (Length: 332)
Name: NF14312_high_12
Description: NF14312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14312_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 6990433 - 6990110
Alignment:
| Q |
1 |
ctttcaaaatgatttgcttaatgttcctattcgtcggaataatctaagtgtcagcgcatgcattccgccatcggtggataattttaagcttaattgt--- |
97 |
Q |
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|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6990433 |
ctttcaaaattatttgcttaatgttcctactcgtcggaataatctaagtgtcagcgcatgcattccgccatcggtggataattttaagcttaattgtgat |
6990334 |
T |
|
| Q |
98 |
---------tcaacagttaggtagagcagcatgccgtggcatgttgtgtgatcataatggttgattcatttgtgtgttcgcatccaacttgaagttatgt |
188 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
6990333 |
gcttgtggttcaacatttaggtagagcagcatgccgtggcatgttgtgtgatcataatggttgattcatttgtgtgtttgcatccaacttgaagttatgt |
6990234 |
T |
|
| Q |
189 |
tcaattgcacacgcagatttttgcactattttcattggtgttaaattagctttagacaagggctgccaaagaattcttgtcgagtctgactctcaagttg |
288 |
Q |
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|
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6990233 |
tcaattgcacacgcagatttttgcgctatttttattggtgttaaattagctttagacaagggctgccaaagaattcttgtcgagtctgactctcaagttg |
6990134 |
T |
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| Q |
289 |
ccgtgggtttactaaatagtggag |
312 |
Q |
| |
|
|||||||||||||||||||||||| |
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| T |
6990133 |
ccgtgggtttactaaatagtggag |
6990110 |
T |
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