View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14312_low_11 (Length: 334)

Name: NF14312_low_11
Description: NF14312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14312_low_11
NF14312_low_11
[»] chr1 (28 HSPs)
chr1 (1-326)||(21037876-21038199)
chr1 (220-289)||(25361896-25361965)
chr1 (214-289)||(44482234-44482309)
chr1 (213-289)||(34371717-34371792)
chr1 (217-272)||(7918208-7918263)
chr1 (213-272)||(20157347-20157406)
chr1 (193-272)||(40285651-40285730)
chr1 (211-269)||(52903250-52903308)
chr1 (213-286)||(5376483-5376556)
chr1 (213-289)||(9629880-9629956)
chr1 (217-289)||(9828051-9828123)
chr1 (213-285)||(17754314-17754386)
chr1 (216-272)||(34712380-34712436)
chr1 (213-268)||(38503323-38503378)
chr1 (218-269)||(39130767-39130818)
chr1 (218-289)||(47989505-47989576)
chr1 (213-285)||(17831518-17831587)
chr1 (213-267)||(26238115-26238168)
chr1 (185-250)||(2896140-2896205)
chr1 (195-272)||(6427335-6427412)
chr1 (212-289)||(23804430-23804507)
chr1 (184-257)||(28674774-28674847)
chr1 (195-288)||(36905982-36906075)
chr1 (213-273)||(48148033-48148094)
chr1 (213-269)||(19637771-19637827)
chr1 (196-252)||(37055873-37055929)
chr1 (221-261)||(41500714-41500754)
chr1 (221-261)||(41510892-41510932)
[»] chr3 (21 HSPs)
chr3 (213-284)||(8039820-8039891)
chr3 (218-256)||(25892468-25892506)
chr3 (213-269)||(8383260-8383316)
chr3 (217-289)||(14209120-14209192)
chr3 (217-289)||(14216899-14216971)
chr3 (217-289)||(14223028-14223100)
chr3 (214-289)||(15812803-15812876)
chr3 (213-269)||(49505154-49505210)
chr3 (218-289)||(16789020-16789091)
chr3 (193-284)||(17005604-17005695)
chr3 (191-258)||(29508425-29508492)
chr3 (218-256)||(1830351-1830389)
chr3 (218-268)||(20691327-20691377)
chr3 (211-257)||(21419467-21419513)
chr3 (218-268)||(40150572-40150622)
chr3 (213-250)||(4466619-4466656)
chr3 (210-251)||(4469850-4469891)
chr3 (225-286)||(29386494-29386555)
chr3 (213-269)||(7928453-7928509)
chr3 (216-272)||(11313797-11313853)
chr3 (213-289)||(16192730-16192806)
[»] chr7 (25 HSPs)
chr7 (190-289)||(32308100-32308199)
chr7 (217-272)||(18013071-18013126)
chr7 (213-257)||(5235989-5236033)
chr7 (218-326)||(23128609-23128712)
chr7 (218-269)||(4909159-4909210)
chr7 (213-272)||(5548679-5548738)
chr7 (213-267)||(27093415-27093469)
chr7 (213-267)||(27184832-27184886)
chr7 (213-258)||(8160419-8160464)
chr7 (211-267)||(17851432-17851488)
chr7 (218-258)||(27732250-27732290)
chr7 (217-272)||(7758329-7758384)
chr7 (185-252)||(13770666-13770733)
chr7 (211-272)||(7328688-7328749)
chr7 (216-269)||(21568622-21568675)
chr7 (215-252)||(21880157-21880194)
chr7 (216-289)||(24339648-24339721)
chr7 (217-285)||(6630896-6630964)
chr7 (218-258)||(8239061-8239101)
chr7 (218-258)||(10377515-10377555)
chr7 (218-258)||(12278843-12278883)
chr7 (213-269)||(20549794-20549850)
chr7 (217-249)||(21141002-21141034)
chr7 (216-252)||(30813818-30813854)
chr7 (240-284)||(41811668-41811712)
[»] chr5 (20 HSPs)
chr5 (183-258)||(15410459-15410534)
chr5 (215-282)||(2236772-2236839)
chr5 (213-285)||(3966506-3966578)
chr5 (213-285)||(18592076-18592148)
chr5 (213-269)||(32630735-32630791)
chr5 (213-273)||(36838546-36838606)
chr5 (195-289)||(39698526-39698620)
chr5 (190-258)||(33035812-33035880)
chr5 (213-252)||(27932238-27932277)
chr5 (215-268)||(12927659-12927712)
chr5 (188-289)||(19579679-19579780)
chr5 (185-258)||(26312744-26312817)
chr5 (213-258)||(34879353-34879398)
chr5 (218-285)||(2419865-2419930)
chr5 (213-269)||(2548390-2548446)
chr5 (216-272)||(6471886-6471942)
chr5 (218-258)||(19293434-19293474)
chr5 (217-289)||(21542037-21542109)
chr5 (213-269)||(30502388-30502444)
chr5 (213-269)||(30542731-30542787)
[»] chr2 (21 HSPs)
chr2 (213-285)||(24975309-24975381)
chr2 (213-289)||(44860323-44860399)
chr2 (214-285)||(18889575-18889646)
chr2 (213-281)||(31456629-31456697)
chr2 (191-267)||(31808058-31808134)
chr2 (211-269)||(34691805-34691863)
chr2 (211-269)||(34714217-34714275)
chr2 (236-289)||(35056894-35056947)
chr2 (213-269)||(18570975-18571031)
chr2 (210-286)||(36281685-36281761)
chr2 (185-252)||(21091698-21091765)
chr2 (218-269)||(23406876-23406927)
chr2 (220-258)||(17520081-17520119)
chr2 (218-256)||(25544489-25544527)
chr2 (211-288)||(6045897-6045974)
chr2 (211-272)||(15909629-15909690)
chr2 (213-258)||(21616765-21616810)
chr2 (211-252)||(23921254-23921295)
chr2 (218-258)||(4229419-4229459)
chr2 (196-272)||(29970546-29970622)
chr2 (213-257)||(31026698-31026742)
[»] scaffold0136 (1 HSPs)
scaffold0136 (218-289)||(3829-3900)
[»] chr6 (23 HSPs)
chr6 (216-269)||(7996378-7996431)
chr6 (216-269)||(8022370-8022423)
chr6 (181-257)||(9658850-9658926)
chr6 (195-269)||(7265593-7265667)
chr6 (211-289)||(10294108-10294186)
chr6 (218-268)||(34895035-34895085)
chr6 (211-252)||(24614411-24614452)
chr6 (220-272)||(9024173-9024225)
chr6 (216-272)||(9025491-9025547)
chr6 (213-269)||(19040355-19040411)
chr6 (217-252)||(8389489-8389524)
chr6 (220-267)||(13364707-13364754)
chr6 (185-252)||(31579242-31579309)
chr6 (213-252)||(32511683-32511722)
chr6 (218-256)||(19602194-19602232)
chr6 (239-285)||(28862151-28862197)
chr6 (213-258)||(1532243-1532288)
chr6 (221-289)||(10339105-10339174)
chr6 (215-272)||(34073344-34073401)
chr6 (216-252)||(2224232-2224268)
chr6 (213-285)||(9629386-9629458)
chr6 (216-272)||(12696330-12696386)
chr6 (185-285)||(16766672-16766772)
[»] chr4 (16 HSPs)
chr4 (183-256)||(7424643-7424716)
chr4 (182-258)||(22440611-22440687)
chr4 (217-257)||(37698719-37698759)
chr4 (213-272)||(18513238-18513297)
chr4 (182-289)||(30838182-30838289)
chr4 (213-243)||(43240997-43241027)
chr4 (213-263)||(56488516-56488566)
chr4 (214-287)||(847955-848028)
chr4 (217-270)||(6933282-6933335)
chr4 (216-272)||(56257939-56257993)
chr4 (213-289)||(903925-904001)
chr4 (218-258)||(1213232-1213271)
chr4 (213-289)||(30982858-30982934)
chr4 (218-285)||(31243532-31243599)
chr4 (216-272)||(35952614-35952670)
chr4 (218-258)||(55941014-55941054)
[»] scaffold0049 (2 HSPs)
scaffold0049 (220-272)||(56932-56984)
scaffold0049 (208-248)||(63771-63811)
[»] scaffold0036 (1 HSPs)
scaffold0036 (217-289)||(9727-9799)
[»] chr8 (18 HSPs)
chr8 (197-289)||(11803246-11803338)
chr8 (213-257)||(14634153-14634197)
chr8 (216-258)||(12559117-12559159)
chr8 (213-289)||(24362181-24362258)
chr8 (217-289)||(15816109-15816181)
chr8 (218-269)||(4786338-4786389)
chr8 (218-289)||(11927066-11927137)
chr8 (218-268)||(29198480-29198530)
chr8 (216-269)||(3025557-3025610)
chr8 (213-258)||(4611537-4611582)
chr8 (217-262)||(13203648-13203693)
chr8 (228-289)||(26902155-26902216)
chr8 (213-258)||(34897088-34897133)
chr8 (217-257)||(7658470-7658510)
chr8 (218-258)||(9936822-9936862)
chr8 (216-268)||(12606830-12606882)
chr8 (220-256)||(26507450-26507486)
chr8 (213-273)||(33382015-33382075)
[»] scaffold1528 (1 HSPs)
scaffold1528 (213-290)||(1038-1115)
[»] scaffold0008 (1 HSPs)
scaffold0008 (216-289)||(263352-263425)
[»] scaffold0020 (2 HSPs)
scaffold0020 (219-286)||(137789-137856)
scaffold0020 (216-272)||(135309-135365)
[»] scaffold0004 (1 HSPs)
scaffold0004 (213-252)||(92810-92849)
[»] scaffold0044 (1 HSPs)
scaffold0044 (211-289)||(53181-53259)
[»] scaffold0011 (1 HSPs)
scaffold0011 (218-268)||(240022-240072)
[»] scaffold0188 (1 HSPs)
scaffold0188 (185-234)||(9515-9564)
[»] scaffold0022 (1 HSPs)
scaffold0022 (196-257)||(90829-90890)
[»] scaffold0123 (1 HSPs)
scaffold0123 (213-285)||(44509-44581)
[»] scaffold0024 (1 HSPs)
scaffold0024 (186-270)||(68241-68325)


Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 21037876 - 21038199
Alignment:
Q  1 tgaaaggaagaaaaatttcaaaaaagaagaagacagcatgttttcctattacaattagtcaaacatcagaatcaagaaagaattacaacatcagaaccca 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21037876 tgaaaggaagaaaaatttcaaaa--gaagaagacagcatgttttcctattacaattagtcaaacatcagaatcaagaaagaattactacatcagaaccca 21037973  T
Q  101 agaaattcaatttgttttcataagtatgaatttggaagaaaagtggaagatataaaagttgaatgaatcacatatatggccacagacacaacatggacac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||||    
T  21037974 agaaattcaatttgttttcataagtatgaatttggaagaaaagtggaagatataaaagttgaataaaccacatatatgaacacagacacaacatggacac 21038073  T
Q  201 tgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgacaacactgagaca 300  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  21038074 ttatacactaataccgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacgacgacactgagaca 21038173  T
Q  301 cgcctaatctgatgagtgtctgtgct 326  Q
    ||||||||||||||||||||||||||    
T  21038174 cgcctaatctgatgagtgtctgtgct 21038199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 25361896 - 25361965
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||  |||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca 25361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 44482234 - 44482309
Alignment:
Q  214 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||| ||||||| ||||||| | ||||||||||||||| ||||| ||| |||||||||  |||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 44482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 34371717 - 34371792
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||||| | |||||| | ||||||||||||||| ||||| ||| |||||||||| |||||||| ||||||    
T  34371717 accgctaataattga-gaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgaca 34371792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 7918263 - 7918208
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 20157406 - 20157347
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||| ||| |||||||||    
T  20157406 accgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 40285730 - 40285651
Alignment:
Q  193 atggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| |||| || |||||||||||||| |||||||   ||||||||||||| ||||||| |||  ||||||||    
T  40285730 atggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgt 40285651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 52903250 - 52903308
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||| ||||||||||| ||||| ||||||||||||||||| ||||| ||| ||||||    
T  52903250 ataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 5376556 - 5376483
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 286  Q
    |||||||||||||||||||||| | ||||||||||||||| | | | ||| |||||||||   |||||||||||    
T  5376556 accgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 9629956 - 9629880
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||||||| | ||||| |||||||||||||| || ||| | ||| |||||||||   ||||||||||||||    
T  9629956 accgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgaca 9629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 9828051 - 9828123
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| | ||||| | |||||||||||||||  |||| ||| ||||||||| |||||| |||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgaca 9828123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 17754314 - 17754386
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||||||| | ||||||| ||||||||||||||  ||||| |||||||| ||||  |||| ||||||    
T  17754314 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacac 17754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 34712436 - 34712380
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| | |||||| |||||||| ||||| |||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 38503323 - 38503378
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    |||||||||||||| ||||||| ||||| ||||||||||| ||||| ||| |||||    
T  38503323 accgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 39130818 - 39130767
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 47989505 - 47989576
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||| ||||| | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 47989576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 17831587 - 17831518
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||||||| ||||||| | || |||||||||||||||||| |||   |||||||  |||||||||||    
T  17831587 accgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc---gtcgtgtcagtgtcggacac 17831518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 26238168 - 26238115
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||    
T  26238168 accgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagtgt 26238115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 2896205 - 2896140
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgta 250  Q
    ||||||||| ||||||||| || |  | |||||||||||||| ||||||| | |||||||||||||    
T  2896205 gacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 6427335 - 6427412
Alignment:
Q  195 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||| || | || |||||||||||||| ||||||| | |||||||| |||||| ||||| ||  |||||||||    
T  6427335 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Original strand, 23804430 - 23804507
Alignment:
Q  212 taccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||| ||||||||| | |||||||||||||| | |||||| ||||| |||| ||| ||| | |||||||| ||||||    
T  23804430 taccgttaataatttgataaaattatataatttaatgtaattatatgtgtcattgttgtgctggtgtcggatacgaca 23804507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 28674774 - 28674847
Alignment:
Q  184 agacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    ||||||||||| ||| | || || |||| |||| ||||||||| ||||||||| |||||||||| |||| ||||    
T  28674774 agacacaacatagacgccgacacgctaacaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 36905982 - 36906075
Alignment:
Q  195 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgac 288  Q
    ||||||||| |||| || |||||||||||| | ||||||| | ||||||||| ||||| ||||| ||  | || ||||  ||||||||||||||    
T  36905982 ggacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacacgac 36906075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 48148094 - 48148033
Alignment:
Q  213 accgctaataattt-aagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 273  Q
    |||||||||||||| || ||||| ||||||||||||||||| ||||  ||| ||||||||||    
T  48148094 accgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgtt 48148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 19637771 - 19637827
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||| ||||||||||||||||| | || ||||| |||||||||||| ||| ||||||    
T  19637771 accgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcg 19637827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 37055929 - 37055873
Alignment:
Q  196 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||||||||||   |||| ||||||||||| ||||||||| |||||| ||||||||    
T  37055929 gacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaat 37055873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 41500754 - 41500714
Alignment:
Q  221 taatttaagaaaattatataattcagtgtaatcatatgcgt 261  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41500754 taatttaagaaaatgatataattgaatgtaatcatatgcgt 41500714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 41510932 - 41510892
Alignment:
Q  221 taatttaagaaaattatataattcagtgtaatcatatgcgt 261  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41510932 taatttaagaaaatgatataattgaatgtaatcatatgcgt 41510892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 8039891 - 8039820
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 284  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||  ||||||||||    
T  8039891 accgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 25892468 - 25892506
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25892468 taataatttaagaaaatgatataattcagtgtaatcata 25892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 8383260 - 8383316
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||| | ||| ||||||    
T  8383260 accgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 14209120 - 14209192
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| | ||||| | ||||||||||||||| | | | |||||||||||||  |||||||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgaca 14209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 14216899 - 14216971
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| | || || ||||||||||||||||| | | | ||| |||||||||| |||||||||||||||    
T  14216899 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgaca 14216971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 14223028 - 14223100
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| | || || ||||||||||||||||| | | | ||| |||||||||| |||||||||||||||    
T  14223028 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgaca 14223100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 289
Target Start/End: Complemental strand, 15812876 - 15812803
Alignment:
Q  214 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||| |||||||| ||||||| | |||| |||||||||| ||||||  | |||||||||| |||||||||||||||    
T  15812876 ccgcaaataatttgagaaaatcacataactcagtgtaattatatgc--cggtgtcgtgttggtgtcggacacgaca 15812803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 49505210 - 49505154
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| | |||||| |||||||| ||||| ||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 16789020 - 16789091
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||| ||||| ||||||||||||||||| ||| | ||  |||||||||  |||||||||| ||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgaca 16789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 284
Target Start/End: Complemental strand, 17005695 - 17005604
Alignment:
Q  193 atggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 284  Q
    |||||||||||  ||| || ||| |||||||||| | ||||| ||||||||||||||||| ||| | ||| |||| ||||| ||||| ||||    
T  17005695 atggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagaca 17005604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 29508425 - 29508492
Alignment:
Q  191 acatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||| ||| ||||  ||||| |||||||||| | ||||| ||||||||||||||||| |||||    
T  29508425 acatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatg 29508492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 1830351 - 1830389
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcata 1830389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 20691327 - 20691377
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||| ||||||| | ||||||||||||||||||||| ||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtc 20691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 21419513 - 21419467
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  21419513 ataccgttaataatttaagaaaataatataattcaatgtaattatat 21419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 40150622 - 40150572
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||| ||||||| |||||||||| |||||||||||| ||| |||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtc 40150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 4466656 - 4466619
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgta 250  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  4466656 accggtaataatttaagaaaatcatataattcagtgta 4466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 4469850 - 4469891
Alignment:
Q  210 aataccgctaataatttaagaaaattatataattcagtgtaa 251  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  4469850 aataccgccaataatttaagaaaatcacataattcagtgtaa 4469891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 29386555 - 29386494
Alignment:
Q  225 ttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 286  Q
    ||||||||| |  ||||||||||||||||||||| ||| |||||||||  || |||||||||    
T  29386555 ttaagaaaactgcataattcagtgtaatcatatgtgtcggtgtcgtgtaggtatcggacacg 29386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 7928453 - 7928509
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| | ||||| | ||||||||||||||| ||||| ||| ||||||    
T  7928453 accgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 11313853 - 11313797
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| | |||||| |||||||| ||||| || ||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 16192806 - 16192730
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||| ||||||||| ||||||| | ||||||||||||||| ||||| ||   ||||||||  ||||| |||||||||    
T  16192806 accgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgaca 16192730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 190 - 289
Target Start/End: Original strand, 32308100 - 32308199
Alignment:
Q  190 aacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||||||| || |  | |||||||||||||| ||||||| | |||||||||||||||  |||| |||||||||||||  |||| ||||||||||    
T  32308100 aacatggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgaca 32308199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 18013126 - 18013071
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 5235989 - 5236033
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  5235989 accgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 326
Target Start/End: Complemental strand, 23128712 - 23128609
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgacaacactgagacacgcctaatctgatgagt 317  Q
    ||||||||| ||||||  ||||||||||||||||||||||| ||| |||| ||||| |||||| ||| |     | |||| ||||||||||| || ||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcgaacatg-----attgaggcacgcctaatccgaggagt 23128618  T
Q  318 gtctgtgct 326  Q
    |||||||||    
T  23128617 gtctgtgct 23128609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 4909159 - 4909210
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||| ||||||||| |||||||| |||||||||||| ||||||||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcg 4909210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 5548679 - 5548738
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||| ||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  5548679 accgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 27093469 - 27093415
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||||| ||||    
T  27093469 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 27184832 - 27184886
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||||| ||||    
T  27184832 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 8160419 - 8160464
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||    
T  8160419 accgctaataatttaagaaaattacataatttagtgtaattatatg 8160464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 17851432 - 17851488
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    |||||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||    
T  17851432 ataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 27732290 - 27732250
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatg 27732250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 7758329 - 7758384
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||||| |||||||||||||||||||| |||| || || ||| |||||||||    
T  7758329 ctaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgt 7758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 13770666 - 13770733
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||| ||| |||||||||||| |  | || ||||||||||||| ||||||| |||||||||||||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaat 13770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 7328749 - 7328688
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||| ||||||||||| ||||||| | |||||| |||||||| ||||| ||| |||||||||    
T  7328749 atactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 21568675 - 21568622
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||||||||   |||||| |||||||||||||| ||| ||||||    
T  21568675 gctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcg 21568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 252
Target Start/End: Original strand, 21880157 - 21880194
Alignment:
Q  215 cgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  21880157 cgctaataatttgagaaaattacataattcagtgtaat 21880194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 24339648 - 24339721
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||| | ||||| | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 24339721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 6630964 - 6630896
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||| ||||| | |  |||||||||||||| ||||| |||  ||||||||| |||||||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacac 6630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 8239101 - 8239061
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatg 8239061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 10377515 - 10377555
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  10377515 taataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 12278843 - 12278883
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||||| | ||||||||||||||| |||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatg 12278883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 20549794 - 20549850
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  20549794 accgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 21141034 - 21141002
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgt 249  Q
    |||||||||||||||||| ||||||||||||||    
T  21141034 ctaataatttaagaaaatcatataattcagtgt 21141002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 30813818 - 30813854
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaat 30813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 41811668 - 41811712
Alignment:
Q  240 aattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 284  Q
    |||||| |||||||||||| |||||||||||||| ||||| ||||    
T  41811668 aattcaatgtaatcatatgtgtcagtgtcgtgttggtgtcagaca 41811712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 15410534 - 15410459
Alignment:
Q  183 cagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||| ||| ||||||||| || |  | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15410534 cagacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatg 15410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 2236839 - 2236772
Alignment:
Q  215 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgga 282  Q
    ||||||||||||||||||||||||||||| | ||||||  ||||| || ||||||||| |||||||||    
T  2236839 cgctaataatttaagaaaattatataatttaatgtaattttatgcatcggtgtcgtgtccgtgtcgga 2236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 3966506 - 3966578
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||||||| ||||||| | | ||||||||||||| ||||| ||| |||||||||  |||||||||||    
T  3966506 accgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 18592076 - 18592148
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||| | | |||||||||  |||||||||||    
T  18592076 accgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacac 18592148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 32630791 - 32630735
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  32630791 accgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 36838546 - 36838606
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 273  Q
    |||||||||||||| ||||||||| |||||| |||||||| ||||| ||| ||||||||||    
T  36838546 accgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 39698526 - 39698620
Alignment:
Q  195 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||| || || | || ||||||||||| | ||||| | ||||||||||||||| | | | |||||||||||||  |||||||||||||||    
T  39698526 ggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgaca 39698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 33035880 - 33035812
Alignment:
Q  190 aacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||||||||  |||||  ||||||||| |  |||| ||||||||||||||||| |||||    
T  33035880 aacatggacactgatacaccgataccattaataatttgaataaatcatataattcagtgtaattatatg 33035812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 27932238 - 27932277
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  27932238 accgctaataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 12927659 - 12927712
Alignment:
Q  215 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||  |||||||||    
T  12927659 cgctaataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtc 12927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 19579679 - 19579780
Alignment:
Q  188 acaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacga 287  Q
    |||||| |||||||||||| |  | || ||||||||||| ||||||| | |||||| |||| ||| | | | ||| |||||||||  |||||||||||||    
T  19579679 acaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacga 19579778  T
Q  288 ca 289  Q
    ||    
T  19579779 ca 19579780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 26312744 - 26312817
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||| |||||||||||||||  |  ||||||| |||||||| ||||||| |  |||||||||||||| |||||    
T  26312744 gacacgacatggacactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaattatatg 26312817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 34879353 - 34879398
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  34879353 accgctaaaaatttgagaaaatcatataattcagtgtaataatatg 34879398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 2419865 - 2419930
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    ||||||||| ||||||||| | ||||||||||||||  ||| ||||||| |||||| ||||| |||||    
T  2419865 taataatttgagaaaattacacaattcagtgtaatc--atgtgtcagtgccgtgttggtgtcagacac 2419930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 2548390 - 2548446
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||| ||||||||  ||||||||| ||||||||||||||||||| | ||| ||||||    
T  2548390 accgataataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcg 2548446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 6471942 - 6471886
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||| ||  |||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 19293474 - 19293434
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  19293474 taataatttaagaaaataacataattaagtgtaatcatatg 19293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 21542037 - 21542109
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||||| || || | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 21542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 30502444 - 30502388
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  30502444 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 30542787 - 30542731
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  30542787 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 24975381 - 24975309
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||||||| |||||||  |||||||||||||||  ||||||||| ||||||||| |||||| |||||    
T  24975381 accgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac 24975309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 44860323 - 44860399
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||| ||| |||||||||| |||| ||||||||||    
T  44860323 accgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgaca 44860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 18889646 - 18889575
Alignment:
Q  214 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||| || ||||||| | ||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  18889646 ccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 31456697 - 31456629
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgg 281  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |  ||||| ||||||  |||||||    
T  31456697 accgctaataatttaagaaaattatgtaattcagtgtaattataagtatcagtttcgtgtaggtgtcgg 31456629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 31808058 - 31808134
Alignment:
Q  191 acatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    |||| |||||||| ||||  | |||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||    
T  31808058 acattgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 34691863 - 34691805
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||| ||| ||||||    
T  34691863 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 34714275 - 34714217
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||| ||| ||||||    
T  34714275 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 35056894 - 35056947
Alignment:
Q  236 atataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||||||||| ||||| ||| |||||||||  |||||||||||||||    
T  35056894 atataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 35056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 18570975 - 18571031
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||| ||||||||| ||||||| | |||||||| |||||||||||| ||||||||||    
T  18570975 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 18571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 36281685 - 36281761
Alignment:
Q  210 aataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 286  Q
    ||||||| ||||||||| ||||||| | |||||| ||||||||||||||  ||  ||| |||| |||||||||||||    
T  36281685 aataccgttaataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggacacg 36281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 21091698 - 21091765
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||||| | ||||||||| ||||  | |||||||||||||||||||||| | ||| |||||||||||    
T  21091698 gacacaagacggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaat 21091765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 23406876 - 23406927
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||||||||||||| |||||||||  |||||||| | ||||||||||    
T  23406876 taataatttaagaaaattacataattcagaataatcataggtgtcagtgtcg 23406927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 17520119 - 17520081
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcatatg 17520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Original strand, 25544489 - 25544527
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  25544489 taataatttgagaaaatgatataattcagtgtaatcata 25544527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 288
Target Start/End: Complemental strand, 6045974 - 6045897
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgac 288  Q
    |||||||||||||||| | ||||| ||| ||||||  ||| | ||||| ||| |||| ||||| ||||||||||||||    
T  6045974 ataccgctaataatttgataaaatcatacaattcaaagtagttatatgtgtcggtgtggtgttggtgtcggacacgac 6045897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 15909690 - 15909629
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||| ||||| | ||| ||||||||| ||||||||||||||| ||||| | |||||||||||    
T  15909690 atacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 21616765 - 21616810
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  21616765 accgctaataatttgagaaaatcacataattcagtgtaattatatg 21616810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 23921254 - 23921295
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||| ||||||||| ||||||||| |||||||||||||||    
T  23921254 ataccgttaataatttgagaaaattacataattcagtgtaat 23921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 4229459 - 4229419
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  4229459 taataatttaagagaatgacataattcagtgtaatcatatg 4229419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 29970622 - 29970546
Alignment:
Q  196 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||| ||| | | |||||||||||||| |||||||   ||| ||||||||||||||||| |||  ||||||||    
T  29970622 gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgt 29970546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 31026698 - 31026742
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||| ||||||||||||||||| | |||||||| |||||||||||    
T  31026698 accgataataatttaagaaaatgacataattcaatgtaatcatat 31026742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 3900 - 3829
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||| ||||| | ||||||||||||||| | | | |||||||||||||| |||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgaca 3829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 7996431 - 7996378
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 8022370 - 8022423
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 9658850 - 9658926
Alignment:
Q  181 cacagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    ||||||||| ||| ||||||||| || |  | |||||||||||||||||||||| | ||||||||||||||| ||||    
T  9658850 cacagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 7265667 - 7265593
Alignment:
Q  195 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||| || | || |||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||||    
T  7265667 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 10294108 - 10294186
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||||||||| ||| |||   ||| |||| |||||| ||||| ||| |||||||||| |||||||||||||||    
T  10294108 ataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgaca 10294186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 34895085 - 34895035
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  34895085 taataatttgagaaaattatacaattcagtgtaatcataggtgtcagtgtc 34895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 24614411 - 24614452
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  24614411 ataccgctaataatttaaaaaaattatataatttagtgtaat 24614452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 9024225 - 9024173
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||| ||||||| | |||||||| |||||||||||| |||||||||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgt 9024173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 9025547 - 9025491
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||| ||| |||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 19040355 - 19040411
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||||    
T  19040355 accgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 8389524 - 8389489
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||||||||| |||||||||||||||||    
T  8389524 ctaataatttaagaaaatcatataattcagtgtaat 8389489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 267
Target Start/End: Complemental strand, 13364754 - 13364707
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 267  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 31579309 - 31579242
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||| ||||||||||||  |||| || |||| ||||||||| ||||||| | |||||||||||||||    
T  31579309 gacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgtaat 31579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 32511722 - 32511683
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  32511722 accgctaataatttaagaaaatcacataattcagtgtaat 32511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 19602232 - 19602194
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  19602232 taataatttgagaaaatgatataattcagtgtaatcata 19602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 28862151 - 28862197
Alignment:
Q  239 taattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||||||||||||||| ||| |||||||||| ||||| |||||    
T  28862151 taattcagtgtaatcatatgtgtcggtgtcgtgttggtgtctgacac 28862197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 1532243 - 1532288
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||| | ||||||| ||||||||||||||| |||||    
T  1532243 accgctaataatttgataaaattacataattcagtgtaattatatg 1532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 10339174 - 10339105
Alignment:
Q  221 taatttaagaaaattatataattcagtgt-aatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||| ||||||| | |||||||||||| ||| ||||| ||||||| |||||  |||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgaca 10339105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 34073401 - 34073344
Alignment:
Q  215 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||||||||||| |||||||   ||||||||||||||| ||||| ||| |||||||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 2224232 - 2224268
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaat 252  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2224232 gctaataatttaaaaaaatcatataattcagtgtaat 2224268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 9629386 - 9629458
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    ||||| |||||||| ||||||| | |||||||| |||||| ||||| ||| ||||||   |||||||||||||    
T  9629386 accgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacac 9629458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 12696330 - 12696386
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| | ||||||| ||||||||||||||| | | | |||||||||||||    
T  12696330 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt 12696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 16766672 - 16766772
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 284  Q
    ||||| ||||||||||||| || |  | || ||||||||||| | ||||| | ||||||||||||||| | | | ||| |||||||||  ||||||||||    
T  16766672 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 16766771  T
Q  285 c 285  Q
    |    
T  16766772 c 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 7424643 - 7424716
Alignment:
Q  183 cagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||| |||||||||| || |||  || |||| ||||||||||||||||| |||||||| ||||||||||||    
T  7424643 cagacacgacatggacaccgacacatcaacaccgataataatttaagaaaataatataattgagtgtaatcata 7424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 22440687 - 22440611
Alignment:
Q  182 acagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||| |||||||||||||||||   | |||| ||||||||| ||||||| | ||||||||||||||| |||||    
T  22440687 acagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatg 22440611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 18513297 - 18513238
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    |||| ||||||||| ||||||| | |||||||| |||||||||||| |||||||| ||||    
T  18513297 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgt 18513238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 289
Target Start/End: Original strand, 30838182 - 30838289
Alignment:
Q  182 acagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgg 281  Q
    ||||||||  || ||||||||||||    |||| ||||||||||| | |||||||||||||| |||||||| ||| |  || |||||||||  |||||||    
T  30838182 acagacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcgg 30838281  T
Q  282 acacgaca 289  Q
    || |||||    
T  30838282 acgcgaca 30838289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 243
Target Start/End: Complemental strand, 43241027 - 43240997
Alignment:
Q  213 accgctaataatttaagaaaattatataatt 243  Q
    |||||||||||||||||||||||||||||||    
T  43241027 accgctaataatttaagaaaattatataatt 43240997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 56488566 - 56488516
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtca 263  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||||| ||||    
T  56488566 accgctaacaatttgagaaaatcatataattcagggtaatcatatgtgtca 56488516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 287
Target Start/End: Original strand, 847955 - 848028
Alignment:
Q  214 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacga 287  Q
    ||||||||||||| ||||||||| |||||||| | |||| | | | ||| ||||| |||| |||||||||||||    
T  847955 ccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacga 848028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 6933282 - 6933335
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgt 270  Q
    |||||||| |||||||||   |||||||||| |||||||||| |||||||||||    
T  6933282 ctaataatgtaagaaaatctcataattcagtttaatcatatgtgtcagtgtcgt 6933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 56257939 - 56257993
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| |||||||||||||||||  |||| ||| |||||||||    
T  56257939 gctaataatttgagaaaatcatataattcagtgtaat--tatgtgtctgtgtcgtgt 56257993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 903925 - 904001
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||| ||||||||| ||||||| | ||||||||||||||| |||||  ||||| |||| |  |||| ||||||||||    
T  903925 accgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgaca 904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 1213271 - 1213232
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  1213271 taataatttaa-aaaattatataattcagtgtaattatatg 1213232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 30982934 - 30982858
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||| |||| ||||||| | ||| ||||||||||| ||| | ||| |||||||||  ||||| |||||||||    
T  30982934 accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgaca 30982858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 31243599 - 31243532
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc-gtgttcgtgtcggacac 285  Q
    ||||||||| ||||||| | ||||||||||||||||||| | |||| |||| ||||| |||||||||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgtca-tgtcggtgttggtgtcggacac 31243532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 35952670 - 35952614
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| | ||||| |||||||||| |||||| |||||  ||||||||||||    
T  35952670 gctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgt 35952614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 55941054 - 55941014
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||||||| |||||| ||| ||||||||||    
T  55941054 taataatttaagaaaattacataatttagtataatcatatg 55941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 56932 - 56984
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||| ||||||| ||||||||||||||||||||| | |||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgt 56984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 63771 - 63811
Alignment:
Q  208 ctaataccgctaataatttaagaaaattatataattcagtg 248  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  63771 ctaacaccgctaataatttgagaaaattacataattcagtg 63811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 9799 - 9727
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| ||||||| |  |||||||||||||| ||||| ||| |||||||||| ||||| |||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgaca 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 11803246 - 11803338
Alignment:
Q  197 acactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||||| | || | ||||||||||||||||| | ||||||||||||||| ||||| ||  |||| ||||| |||| ||| ||||||    
T  11803246 acactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgaca 11803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 14634197 - 14634153
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||    
T  14634197 accgctaacaatttaagaaaattatataattcagtgtaattatat 14634153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 12559159 - 12559117
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  12559159 gctaataatttgagaaaatgatataattcagtgtaatcatatg 12559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 24362258 - 24362181
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgt-cggacacgaca 289  Q
    |||||||||||||| ||| ||| | ||||||||||||||| ||||| |||| ||||||||  |||| |||||||||||    
T  24362258 accgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgaca 24362181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 15816181 - 15816109
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    |||||||||| | ||||| | |||||| |||||||| ||| | ||| |||||||||| |||||||||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgaca 15816109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 4786389 - 4786338
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||||||||||| | ||||||||||||||| ||||| ||| ||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 11927137 - 11927066
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||| | ||||| | ||||||||||||||| ||||| ||| |||||||||| |||||  ||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgaca 11927066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 29198530 - 29198480
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||| ||||||| | |||||||| ||||||||||||||||| ||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcatatgcgtcaatgtc 29198480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 269  Q
    ||||||||||| ||||||| | ||||||||||||||| ||| | ||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 4611537 - 4611582
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  4611537 accgctaataatttgagaaaataacataattcagtgtaattatatg 4611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 13203648 - 13203693
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtc 262  Q
    |||||||||| ||||||||| ||||||||||||||| |||| ||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatatacgtc 13203693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 26902216 - 26902155
Alignment:
Q  228 agaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||| | ||||||||||||||| ||||| ||| ||||||| |  |||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgaca 26902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 34897088 - 34897133
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  34897088 accgctaataatttgagaaaatcacataattcagtgtaattatatg 34897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 7658470 - 7658510
Alignment:
Q  217 ctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||||||||| ||||||||| ||||||||||||||| ||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 9936822 - 9936862
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatg 258  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  9936822 taataatttaagaaaatgatataattcaatataatcatatg 9936862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 12606882 - 12606830
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||||| ||||||| |||||||||| |||||| ||||| ||| |||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 26507450 - 26507486
Alignment:
Q  220 ataatttaagaaaattatataattcagtgtaatcata 256  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  26507450 ataatttaagaaaataatataattaagtgtaatcata 26507486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 33382075 - 33382015
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 273  Q
    |||| ||||||||||||||||| | ||||||||| ||||| ||||| ||| ||||| ||||    
T  33382075 accgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtcatgtt 33382015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 290
Target Start/End: Original strand, 1038 - 1115
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgacaa 290  Q
    |||||||||||||| | ||||||| ||||||||||||||  ||||| |||||||| ||||  |||| |||||| ||||    
T  1038 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacaa 1115  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 263425 - 263352
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||||||| ||||||  | ||||||||||||||| ||| | |||||||||||||  ||||| |||||||||    
T  263425 gctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgaca 263352  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 137789 - 137856
Alignment:
Q  219 aataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 286  Q
    |||||||||||||||| | | ||||||||||| ||||||| ||  |||||||||  ||||||||||||    
T  137789 aataatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggacacg 137856  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 135365 - 135309
Alignment:
Q  216 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 272  Q
    ||||||||||| ||||||| | ||||||| ||||||| ||||| ||| |||||||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 92810 - 92849
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaat 252  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  92810 accgctaataatttgagaaaattacataattcagtgtaat 92849  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 53181 - 53259
Alignment:
Q  211 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 289  Q
    ||||||| |||||||| ||||||| | ||||||||||||||| ||| | ||| ||| |||||  |||||||||| ||||    
T  53181 ataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgaca 53259  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  218 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 268  Q
    ||||||||| ||||||| |||||||||| |||||||||||| ||| |||||    
T  240072 taataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 9515 - 9564
Alignment:
Q  185 gacacaacatggacactgatacactaataccgctaataatttaagaaaat 234  Q
    ||||||||||||||||||| ||||| | |||||||||||| | |||||||    
T  9515 gacacaacatggacactgagacactcacaccgctaataatatgagaaaat 9564  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 90829 - 90890
Alignment:
Q  196 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 257  Q
    |||||||| |||| || |||  ||||||||| ||||||| ||||||||||||||||| ||||    
T  90829 gacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 44581 - 44509
Alignment:
Q  213 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 285  Q
    |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||| || ||||||  |||| ||||||    
T  44581 accgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacac 44509  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 68325 - 68241
Alignment:
Q  186 acacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgt 270  Q
    |||||||||| | ||||| ||| ||  |||| ||||||||| ||||||| |||||||| ||| |||| ||| | |||||||||||    
T  68325 acacaacatgaatactgacacattagcaccgttaataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgt 68241  T

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