View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14313_low_7 (Length: 402)
Name: NF14313_low_7
Description: NF14313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14313_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 394
Target Start/End: Original strand, 41026666 - 41027059
Alignment:
| Q |
1 |
atgtagagaatcttggtgataagactattgatcaacataccctactacttaggcatgtatgcgataagtttgtgtggatgtatgcaaaatagacggttaa |
100 |
Q |
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| T |
41026666 |
atgtagagaatcttggtgataagactattgatcaacataccctactacttaggcatgtatgcgataagtttgtgtggatgtatgcaaaatagacggttaa |
41026765 |
T |
|
| Q |
101 |
taacaagatgtatttgataatgaagatgttaagttcgacgcctcaagatggattacgcatatcatttcattactttccaaggaactatgaatcaactttc |
200 |
Q |
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| T |
41026766 |
taacaagatgtatttgataatgaagatgttaagtttgacgcctcaagatggattaggcatatcatttcattactttccaaggaactatgaatcaactttc |
41026865 |
T |
|
| Q |
201 |
tgctacaagtattaagtatgatgacgaagttcaggggttatttcttcttggttccttgcacgagttgtgaaaattttaagaatgtcattctataattctt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
41026866 |
tgctacaagtattaagtatgatgacgaagttcaggggttatttcttcttggttccttgcacgagttgtggaaattttaagaatgtcattctataattctt |
41026965 |
T |
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| Q |
301 |
ttgttcatggtatgttgtcaattgaccttattgagagtaatattatgaatgaggagacgagaagaaagtctcaggttccatttcacatgtagaa |
394 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41026966 |
ttgttcatggtgtgttgtcaattgaccttattgagagtaatattatgaatgaggagacgagaagaaagtctcaggttccatttcacatgtagaa |
41027059 |
T |
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