View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14314_low_15 (Length: 240)
Name: NF14314_low_15
Description: NF14314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14314_low_15 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 39591870 - 39591631
Alignment:
| Q |
1 |
ccttactgcttgcatttatttttattccataccttgcaagccagttggtatttgcaaaagggagaaacaatgttagagaagcttgcaaagtaactaggta |
100 |
Q |
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| T |
39591870 |
ccttactgcttgcatttatttttattccataccttgcaagccagttggtatttgcaaaagggagaaacaatgttagagaagcttgcaaagtaactaggta |
39591771 |
T |
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| Q |
101 |
tcaaaacctttgtatgcgctcgctagcaccgttctctaacagtgctggaagaggccctagcaagtgggcaagggctggagtgtcggtgacaatcggtgaa |
200 |
Q |
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| T |
39591770 |
tcaaaacctttgtatgcgctcgctagcaccgttctcttacagtgctggaagaggccctagcaagtgggcaagggctggagtgtcggtgacaatcggtgaa |
39591671 |
T |
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| Q |
201 |
gttaagaatgtccaagcatatctcgcaaacttaactagac |
240 |
Q |
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|||||||||||||||||||||||| ||||||||||||||| |
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| T |
39591670 |
gttaagaatgtccaagcatatctcacaaacttaactagac |
39591631 |
T |
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