View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14314_low_19 (Length: 236)

Name: NF14314_low_19
Description: NF14314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14314_low_19
NF14314_low_19
[»] chr2 (74 HSPs)
chr2 (17-219)||(3423801-3424003)
chr2 (99-187)||(15866733-15866821)
chr2 (98-190)||(11513817-11513906)
chr2 (98-176)||(44606164-44606242)
chr2 (104-185)||(9478221-9478302)
chr2 (106-179)||(35459834-35459907)
chr2 (115-187)||(2416246-2416318)
chr2 (100-179)||(17952774-17952853)
chr2 (115-190)||(25609729-25609804)
chr2 (106-184)||(3102617-3102695)
chr2 (103-189)||(6926505-6926590)
chr2 (115-189)||(10143105-10143179)
chr2 (104-190)||(28803568-28803654)
chr2 (115-164)||(5045245-5045294)
chr2 (121-190)||(13630343-13630412)
chr2 (98-187)||(29430672-29430760)
chr2 (98-179)||(42817449-42817530)
chr2 (123-179)||(3458598-3458654)
chr2 (109-189)||(3673734-3673814)
chr2 (98-162)||(15173442-15173506)
chr2 (106-186)||(18962104-18962184)
chr2 (146-190)||(31740021-31740065)
chr2 (123-190)||(23143040-23143107)
chr2 (123-190)||(23554830-23554897)
chr2 (107-170)||(31461363-31461426)
chr2 (99-190)||(32694130-32694220)
chr2 (121-179)||(16946981-16947039)
chr2 (121-179)||(17017646-17017704)
chr2 (121-179)||(34339845-34339903)
chr2 (119-189)||(39929804-39929874)
chr2 (124-190)||(43199356-43199422)
chr2 (98-179)||(43808492-43808573)
chr2 (115-172)||(4026750-4026807)
chr2 (99-176)||(10150672-10150749)
chr2 (101-177)||(35809852-35809927)
chr2 (149-185)||(43173189-43173225)
chr2 (102-162)||(43431534-43431594)
chr2 (126-177)||(1939407-1939458)
chr2 (115-186)||(11344350-11344421)
chr2 (115-190)||(35755564-35755639)
chr2 (98-165)||(38239638-38239705)
chr2 (123-178)||(40837502-40837557)
chr2 (98-184)||(6547826-6547912)
chr2 (144-190)||(6993786-6993832)
chr2 (115-173)||(7825185-7825243)
chr2 (145-179)||(10646362-10646396)
chr2 (105-179)||(11863723-11863797)
chr2 (106-184)||(14209201-14209279)
chr2 (98-164)||(33197327-33197393)
chr2 (144-190)||(33942112-33942158)
chr2 (99-189)||(37053511-37053601)
chr2 (144-190)||(37292409-37292455)
chr2 (104-190)||(37766720-37766806)
chr2 (106-176)||(40672872-40672942)
chr2 (150-187)||(1160809-1160846)
chr2 (115-172)||(3611159-3611216)
chr2 (105-190)||(4550700-4550785)
chr2 (144-173)||(6988077-6988106)
chr2 (115-176)||(7282951-7283012)
chr2 (109-162)||(13864577-13864630)
chr2 (115-176)||(15171183-15171244)
chr2 (122-187)||(28039397-28039462)
chr2 (98-174)||(29503161-29503235)
chr2 (145-186)||(33944568-33944609)
chr2 (106-167)||(35252207-35252268)
chr2 (121-190)||(39983282-39983350)
chr2 (127-172)||(41407246-41407291)
chr2 (146-190)||(5043622-5043666)
chr2 (127-199)||(14666493-14666565)
chr2 (127-187)||(22681250-22681310)
chr2 (121-173)||(23747243-23747295)
chr2 (123-175)||(28933765-28933817)
chr2 (121-161)||(44119723-44119763)
chr2 (107-175)||(44458415-44458483)
[»] chr4 (66 HSPs)
chr4 (20-220)||(11917404-11917597)
chr4 (102-190)||(49219059-49219147)
chr4 (110-190)||(4071811-4071890)
chr4 (99-174)||(28581988-28582062)
chr4 (115-190)||(42321941-42322016)
chr4 (100-186)||(30024618-30024704)
chr4 (99-184)||(19422335-19422420)
chr4 (98-165)||(55599082-55599149)
chr4 (107-199)||(8422892-8422982)
chr4 (98-190)||(24193501-24193593)
chr4 (115-186)||(8130107-8130178)
chr4 (147-190)||(13949906-13949949)
chr4 (98-188)||(26883910-26884001)
chr4 (99-190)||(30207633-30207723)
chr4 (101-176)||(35743223-35743298)
chr4 (119-186)||(44119228-44119295)
chr4 (128-179)||(52735068-52735119)
chr4 (99-193)||(3549590-3549683)
chr4 (106-192)||(41606110-41606196)
chr4 (115-165)||(51044546-51044596)
chr4 (105-187)||(54325102-54325184)
chr4 (100-176)||(4191657-4191734)
chr4 (133-190)||(10192235-10192292)
chr4 (102-179)||(22684589-22684666)
chr4 (126-187)||(27623579-27623640)
chr4 (106-179)||(36734817-36734890)
chr4 (118-179)||(40865746-40865806)
chr4 (109-174)||(47970245-47970310)
chr4 (106-163)||(51555956-51556013)
chr4 (98-173)||(485997-486073)
chr4 (98-166)||(3249800-3249868)
chr4 (98-190)||(24443954-24444046)
chr4 (107-190)||(32920462-32920543)
chr4 (98-186)||(45128376-45128464)
chr4 (109-176)||(7022595-7022662)
chr4 (144-199)||(18630642-18630697)
chr4 (106-137)||(23819014-23819045)
chr4 (103-190)||(24160557-24160644)
chr4 (144-179)||(32724081-32724116)
chr4 (141-184)||(44007940-44007983)
chr4 (144-187)||(46859892-46859935)
chr4 (121-187)||(6364088-6364154)
chr4 (104-161)||(15511425-15511483)
chr4 (99-164)||(15969820-15969886)
chr4 (120-186)||(19040181-19040247)
chr4 (99-137)||(27321946-27321984)
chr4 (115-189)||(46013363-46013437)
chr4 (115-189)||(46247151-46247225)
chr4 (144-190)||(47119027-47119073)
chr4 (151-189)||(53192416-53192454)
chr4 (98-179)||(54414865-54414949)
chr4 (150-184)||(55437354-55437388)
chr4 (153-186)||(24091434-24091467)
chr4 (121-190)||(24160929-24160998)
chr4 (105-190)||(24929416-24929501)
chr4 (145-190)||(25434522-25434567)
chr4 (122-179)||(49803151-49803208)
chr4 (121-190)||(50745939-50746008)
chr4 (125-187)||(53626717-53626781)
chr4 (144-184)||(20936070-20936110)
chr4 (121-165)||(21193937-21193981)
chr4 (151-187)||(21952930-21952966)
chr4 (117-165)||(27968072-27968120)
chr4 (131-179)||(29194476-29194524)
chr4 (110-186)||(43372035-43372111)
chr4 (134-190)||(55870403-55870459)
[»] chr8 (49 HSPs)
chr8 (106-178)||(41620365-41620437)
chr8 (66-179)||(2699192-2699303)
chr8 (101-190)||(38561645-38561734)
chr8 (115-187)||(4558731-4558803)
chr8 (98-186)||(31884510-31884598)
chr8 (106-179)||(38874570-38874643)
chr8 (104-165)||(40728505-40728566)
chr8 (123-187)||(1470921-1470985)
chr8 (104-184)||(11494075-11494155)
chr8 (104-172)||(14482124-14482192)
chr8 (98-186)||(34788493-34788581)
chr8 (104-176)||(40357821-40357893)
chr8 (104-179)||(29056064-29056139)
chr8 (101-176)||(40280281-40280356)
chr8 (125-187)||(26820142-26820204)
chr8 (144-190)||(34770854-34770900)
chr8 (106-167)||(2364558-2364619)
chr8 (106-179)||(7026655-7026728)
chr8 (106-190)||(35298539-35298624)
chr8 (98-179)||(41336718-41336799)
chr8 (121-190)||(42597340-42597409)
chr8 (98-190)||(11056729-11056821)
chr8 (121-177)||(12224974-12225030)
chr8 (147-179)||(29262947-29262979)
chr8 (98-190)||(35869753-35869845)
chr8 (144-179)||(2100767-2100802)
chr8 (106-165)||(29699178-29699237)
chr8 (115-190)||(29973014-29973089)
chr8 (98-165)||(39392748-39392815)
chr8 (135-186)||(42237488-42237539)
chr8 (144-190)||(3537093-3537139)
chr8 (115-189)||(3945207-3945281)
chr8 (121-187)||(12361131-12361197)
chr8 (106-176)||(14949812-14949882)
chr8 (121-179)||(26215435-26215493)
chr8 (145-179)||(27728094-27728128)
chr8 (106-172)||(31315533-31315598)
chr8 (106-176)||(34563174-34563244)
chr8 (114-187)||(1112785-1112858)
chr8 (98-187)||(28769404-28769493)
chr8 (123-187)||(31705025-31705090)
chr8 (106-187)||(33209285-33209366)
chr8 (106-186)||(787172-787252)
chr8 (99-179)||(4510945-4511025)
chr8 (151-187)||(7878551-7878587)
chr8 (117-161)||(10062218-10062262)
chr8 (100-160)||(10939325-10939385)
chr8 (149-193)||(11376670-11376714)
chr8 (146-186)||(35374439-35374479)
[»] chr5 (55 HSPs)
chr5 (98-189)||(35135725-35135816)
chr5 (98-179)||(4991016-4991097)
chr5 (105-190)||(36539669-36539754)
chr5 (108-176)||(7096203-7096271)
chr5 (98-190)||(9927501-9927593)
chr5 (105-187)||(32059654-32059735)
chr5 (99-164)||(5284762-5284827)
chr5 (99-184)||(29116998-29117083)
chr5 (98-187)||(32172569-32172658)
chr5 (121-178)||(38047929-38047986)
chr5 (99-190)||(912710-912802)
chr5 (115-179)||(9202821-9202885)
chr5 (99-199)||(42181145-42181245)
chr5 (116-193)||(34117595-34117669)
chr5 (104-179)||(37063147-37063222)
chr5 (99-161)||(12407752-12407813)
chr5 (108-190)||(18704098-18704179)
chr5 (98-164)||(20982223-20982289)
chr5 (97-175)||(38766920-38766998)
chr5 (106-179)||(6733966-6734038)
chr5 (98-159)||(26516214-26516275)
chr5 (122-187)||(36796771-36796836)
chr5 (98-190)||(39823183-39823276)
chr5 (115-187)||(10907312-10907384)
chr5 (98-173)||(11835192-11835268)
chr5 (144-184)||(32969185-32969225)
chr5 (99-167)||(35095868-35095936)
chr5 (106-190)||(35960338-35960421)
chr5 (118-165)||(1636844-1636891)
chr5 (98-165)||(6739788-6739855)
chr5 (144-179)||(8158374-8158409)
chr5 (127-190)||(9703302-9703365)
chr5 (144-183)||(10303763-10303802)
chr5 (144-187)||(14295468-14295511)
chr5 (106-173)||(17756808-17756875)
chr5 (144-187)||(35550911-35550953)
chr5 (144-179)||(39750105-39750140)
chr5 (147-189)||(583836-583878)
chr5 (145-190)||(3952061-3952104)
chr5 (104-154)||(38033890-38033940)
chr5 (115-173)||(40048359-40048417)
chr5 (121-190)||(4855637-4855706)
chr5 (145-190)||(10272493-10272538)
chr5 (105-158)||(10391276-10391329)
chr5 (126-167)||(11615452-11615493)
chr5 (106-159)||(13224353-13224406)
chr5 (115-172)||(14932223-14932280)
chr5 (149-190)||(34205206-34205247)
chr5 (121-186)||(39128578-39128643)
chr5 (144-184)||(12595808-12595848)
chr5 (115-159)||(17498668-17498712)
chr5 (106-190)||(19177403-19177487)
chr5 (115-167)||(21782654-21782706)
chr5 (107-179)||(28586839-28586911)
chr5 (98-179)||(40534110-40534193)
[»] chr3 (69 HSPs)
chr3 (107-190)||(37788786-37788868)
chr3 (105-178)||(38462204-38462277)
chr3 (122-184)||(1395611-1395673)
chr3 (106-176)||(16790432-16790502)
chr3 (124-190)||(29771751-29771817)
chr3 (105-179)||(33307653-33307727)
chr3 (100-184)||(36783402-36783488)
chr3 (106-188)||(43116492-43116574)
chr3 (99-176)||(3182438-3182515)
chr3 (99-179)||(20349549-20349629)
chr3 (104-176)||(44374720-44374792)
chr3 (105-173)||(49772747-49772815)
chr3 (123-190)||(48397587-48397654)
chr3 (100-190)||(22214743-22214833)
chr3 (100-190)||(28779274-28779364)
chr3 (144-190)||(32555043-32555089)
chr3 (115-176)||(3757981-3758042)
chr3 (118-179)||(4990630-4990691)
chr3 (115-187)||(20192671-20192743)
chr3 (106-186)||(32703062-32703142)
chr3 (127-186)||(37689450-37689509)
chr3 (105-172)||(39971242-39971309)
chr3 (124-190)||(24235745-24235811)
chr3 (115-165)||(24605103-24605153)
chr3 (121-175)||(48364956-48365010)
chr3 (98-159)||(16790181-16790242)
chr3 (98-179)||(22232742-22232823)
chr3 (98-178)||(24268228-24268309)
chr3 (144-177)||(25195386-25195419)
chr3 (106-179)||(27792796-27792869)
chr3 (114-179)||(53736186-53736251)
chr3 (106-179)||(54775052-54775125)
chr3 (146-190)||(2865721-2865765)
chr3 (115-159)||(8142803-8142847)
chr3 (127-179)||(10101549-10101601)
chr3 (127-179)||(10212474-10212526)
chr3 (98-186)||(21574408-21574495)
chr3 (115-190)||(23530246-23530322)
chr3 (118-186)||(30669036-30669104)
chr3 (107-179)||(36646455-36646527)
chr3 (104-164)||(41028939-41028999)
chr3 (106-177)||(32663566-32663636)
chr3 (119-165)||(36283659-36283703)
chr3 (99-185)||(25129748-25129833)
chr3 (144-178)||(26990696-26990730)
chr3 (104-190)||(36101490-36101576)
chr3 (126-184)||(49586984-49587042)
chr3 (106-176)||(53457301-53457371)
chr3 (119-172)||(2128331-2128384)
chr3 (149-190)||(3467450-3467491)
chr3 (98-139)||(9279439-9279480)
chr3 (107-187)||(25183053-25183134)
chr3 (144-189)||(26599140-26599185)
chr3 (99-176)||(28283653-28283730)
chr3 (123-172)||(33882969-33883018)
chr3 (121-190)||(40122815-40122883)
chr3 (103-164)||(41159030-41159091)
chr3 (115-164)||(49546575-49546624)
chr3 (98-159)||(49739483-49739544)
chr3 (115-176)||(52413197-52413258)
chr3 (107-179)||(905043-905115)
chr3 (110-186)||(8007761-8007837)
chr3 (127-179)||(10357378-10357430)
chr3 (127-179)||(15304420-15304472)
chr3 (147-187)||(23315591-23315631)
chr3 (99-159)||(25964359-25964419)
chr3 (98-138)||(28842971-28843011)
chr3 (115-163)||(42039092-42039140)
chr3 (123-179)||(42809242-42809298)
[»] chr6 (51 HSPs)
chr6 (98-179)||(3217263-3217344)
chr6 (98-165)||(32975894-32975961)
chr6 (115-189)||(24836262-24836336)
chr6 (105-186)||(29274295-29274376)
chr6 (128-187)||(2027471-2027530)
chr6 (98-187)||(22742282-22742371)
chr6 (107-190)||(10452422-10452505)
chr6 (99-166)||(28531627-28531694)
chr6 (145-189)||(27595630-27595674)
chr6 (115-190)||(4006647-4006722)
chr6 (99-190)||(11340687-11340777)
chr6 (98-184)||(2206506-2206592)
chr6 (128-186)||(7785808-7785866)
chr6 (105-179)||(8349737-8349811)
chr6 (105-187)||(10032494-10032576)
chr6 (104-189)||(2514624-2514709)
chr6 (98-187)||(3155092-3155181)
chr6 (98-167)||(4248874-4248943)
chr6 (106-179)||(5328898-5328971)
chr6 (99-187)||(10400186-10400274)
chr6 (98-179)||(10749301-10749381)
chr6 (99-176)||(31672544-31672621)
chr6 (98-179)||(33068634-33068715)
chr6 (100-156)||(5554861-5554917)
chr6 (107-179)||(7713950-7714022)
chr6 (115-179)||(20671938-20672002)
chr6 (106-186)||(21959652-21959732)
chr6 (147-179)||(27693512-27693544)
chr6 (144-187)||(281913-281956)
chr6 (104-179)||(7354126-7354201)
chr6 (144-179)||(27713469-27713504)
chr6 (126-165)||(27857319-27857358)
chr6 (116-179)||(32513759-32513821)
chr6 (144-186)||(1402958-1403000)
chr6 (144-190)||(2117365-2117411)
chr6 (98-176)||(6078365-6078443)
chr6 (121-187)||(9093621-9093687)
chr6 (121-179)||(24476541-24476599)
chr6 (105-178)||(28660160-28660234)
chr6 (133-179)||(28660833-28660879)
chr6 (116-190)||(34429752-34429826)
chr6 (105-177)||(1497903-1497976)
chr6 (150-179)||(2732312-2732341)
chr6 (106-179)||(4325381-4325454)
chr6 (104-165)||(8420284-8420345)
chr6 (145-190)||(11363430-11363475)
chr6 (125-165)||(2027891-2027931)
chr6 (111-179)||(2034512-2034579)
chr6 (121-173)||(9559620-9559672)
chr6 (111-175)||(29940725-29940789)
chr6 (115-155)||(33116538-33116578)
[»] scaffold0024 (2 HSPs)
scaffold0024 (98-190)||(27492-27584)
scaffold0024 (121-179)||(21351-21409)
[»] chr1 (64 HSPs)
chr1 (98-185)||(4200145-4200232)
chr1 (114-190)||(15360826-15360902)
chr1 (99-188)||(45990122-45990211)
chr1 (99-179)||(870962-871042)
chr1 (105-190)||(28467369-28467456)
chr1 (98-176)||(7274015-7274093)
chr1 (98-187)||(49516985-49517075)
chr1 (106-186)||(44032065-44032145)
chr1 (118-186)||(48830142-48830210)
chr1 (110-167)||(289168-289225)
chr1 (109-190)||(17269177-17269258)
chr1 (121-190)||(29007778-29007847)
chr1 (98-186)||(43372025-43372113)
chr1 (98-161)||(16982027-16982090)
chr1 (117-184)||(29793991-29794057)
chr1 (98-185)||(50998468-50998555)
chr1 (144-186)||(27738246-27738288)
chr1 (144-190)||(30371110-30371156)
chr1 (106-172)||(33339500-33339566)
chr1 (117-186)||(4256108-4256177)
chr1 (145-190)||(7218136-7218181)
chr1 (129-186)||(44936656-44936713)
chr1 (106-179)||(46980202-46980275)
chr1 (105-190)||(49557064-49557149)
chr1 (101-186)||(52286597-52286682)
chr1 (115-179)||(1232965-1233029)
chr1 (115-171)||(1730825-1730881)
chr1 (144-184)||(10439648-10439688)
chr1 (99-159)||(11218175-11218235)
chr1 (115-179)||(11560622-11560686)
chr1 (128-176)||(14737781-14737829)
chr1 (147-187)||(15361678-15361718)
chr1 (98-186)||(17420119-17420207)
chr1 (98-178)||(23895252-23895332)
chr1 (147-199)||(29723454-29723506)
chr1 (121-169)||(36641814-36641862)
chr1 (103-179)||(42336583-42336659)
chr1 (121-184)||(4215311-4215374)
chr1 (144-187)||(9656612-9656655)
chr1 (151-190)||(25006096-25006135)
chr1 (120-179)||(36151578-36151637)
chr1 (145-176)||(45234160-45234191)
chr1 (144-187)||(47877084-47877127)
chr1 (121-176)||(50319231-50319286)
chr1 (144-190)||(5421982-5422028)
chr1 (99-164)||(4202217-4202282)
chr1 (98-175)||(4304277-4304354)
chr1 (145-190)||(5592747-5592792)
chr1 (123-176)||(6933037-6933090)
chr1 (104-165)||(10854655-10854716)
chr1 (126-179)||(11211062-11211115)
chr1 (99-179)||(30815708-30815789)
chr1 (106-175)||(36602714-36602783)
chr1 (98-183)||(37818380-37818465)
chr1 (98-163)||(44940259-44940324)
chr1 (145-190)||(45205031-45205076)
chr1 (115-179)||(27140418-27140482)
chr1 (126-178)||(38867907-38867959)
chr1 (99-175)||(40357963-40358039)
chr1 (144-184)||(41516148-41516188)
chr1 (99-163)||(41638399-41638463)
chr1 (107-179)||(45107548-45107619)
chr1 (102-173)||(48282053-48282125)
chr1 (123-179)||(52559901-52559957)
[»] chr7 (72 HSPs)
chr7 (119-176)||(8680929-8680986)
chr7 (104-189)||(49060462-49060547)
chr7 (98-179)||(30133967-30134046)
chr7 (100-190)||(30496622-30496712)
chr7 (121-190)||(45813242-45813311)
chr7 (106-178)||(30751441-30751513)
chr7 (119-190)||(1417201-1417272)
chr7 (103-190)||(44241781-44241867)
chr7 (116-186)||(23918891-23918961)
chr7 (97-179)||(27121659-27121741)
chr7 (101-179)||(35536026-35536104)
chr7 (115-165)||(39505890-39505940)
chr7 (105-190)||(9527152-9527237)
chr7 (126-179)||(39591540-39591593)
chr7 (106-179)||(45593792-45593865)
chr7 (106-190)||(5010530-5010614)
chr7 (101-187)||(7453462-7453549)
chr7 (115-186)||(28165024-28165095)
chr7 (144-187)||(31002723-31002766)
chr7 (98-165)||(31341110-31341177)
chr7 (144-187)||(40689051-40689094)
chr7 (115-165)||(5939017-5939067)
chr7 (106-176)||(7244626-7244696)
chr7 (106-179)||(991994-992067)
chr7 (121-190)||(3501028-3501097)
chr7 (93-190)||(5373136-5373233)
chr7 (106-179)||(22759110-22759183)
chr7 (104-189)||(25511549-25511634)
chr7 (106-187)||(47004011-47004092)
chr7 (98-166)||(1431394-1431462)
chr7 (121-184)||(1432032-1432098)
chr7 (105-177)||(2223071-2223143)
chr7 (144-188)||(30456514-30456558)
chr7 (127-171)||(41875864-41875908)
chr7 (119-199)||(48157173-48157253)
chr7 (144-187)||(12835002-12835045)
chr7 (147-186)||(22296294-22296333)
chr7 (156-199)||(24895330-24895373)
chr7 (106-189)||(27481357-27481440)
chr7 (113-179)||(5272893-5272959)
chr7 (115-165)||(5276157-5276207)
chr7 (156-190)||(24909638-24909672)
chr7 (108-178)||(24973870-24973940)
chr7 (121-174)||(31149586-31149640)
chr7 (121-174)||(31167878-31167932)
chr7 (115-165)||(35808991-35809041)
chr7 (120-174)||(36532289-36532343)
chr7 (107-185)||(38496583-38496659)
chr7 (144-190)||(45777233-45777279)
chr7 (145-179)||(46825061-46825095)
chr7 (144-173)||(3635927-3635956)
chr7 (122-179)||(5006582-5006639)
chr7 (122-179)||(7623078-7623135)
chr7 (106-171)||(8445210-8445275)
chr7 (106-187)||(27548187-27548268)
chr7 (118-179)||(27626197-27626258)
chr7 (123-176)||(28178910-28178963)
chr7 (121-190)||(28613596-28613665)
chr7 (99-164)||(29574689-29574754)
chr7 (105-186)||(39551614-39551695)
chr7 (145-186)||(40428518-40428559)
chr7 (122-178)||(1373614-1373670)
chr7 (115-171)||(5269463-5269519)
chr7 (115-159)||(14823938-14823982)
chr7 (115-159)||(15270945-15270989)
chr7 (111-167)||(20476595-20476651)
chr7 (115-151)||(25507284-25507320)
chr7 (115-151)||(25558290-25558326)
chr7 (115-151)||(25558488-25558524)
chr7 (115-179)||(33894556-33894619)
chr7 (127-187)||(38010659-38010719)
chr7 (147-187)||(39908059-39908099)
[»] scaffold0590 (1 HSPs)
scaffold0590 (107-179)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (107-179)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (122-186)||(51508-51572)
[»] scaffold0549 (2 HSPs)
scaffold0549 (99-190)||(1786-1876)
scaffold0549 (99-190)||(3876-3966)
[»] scaffold0015 (1 HSPs)
scaffold0015 (141-179)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (145-186)||(34063-34104)
[»] scaffold0508 (1 HSPs)
scaffold0508 (104-179)||(9848-9923)
[»] scaffold0349 (1 HSPs)
scaffold0349 (144-179)||(18440-18475)
[»] scaffold0287 (1 HSPs)
scaffold0287 (144-173)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (122-179)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (150-187)||(6563-6600)
scaffold0153 (150-187)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (106-171)||(63366-63431)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 219
Target Start/End: Complemental strand, 3424003 - 3423801
Alignment:
Q  17 atcaaaataagaaatagaaaggggtattgatacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaataagcgcttatcatacaa 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3424003 atcaaaatatgaaatagaaaggggtattgatacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaataagtgcttatcatacaa 3423904  T
Q  117 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423903 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaa 3423804  T
Q  217 tat 219  Q
    |||    
T  3423803 tat 3423801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 99 - 187
Target Start/End: Complemental strand, 15866821 - 15866733
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| | || ||||||||||| |||||||    
T  15866821 taagtgcttatcatacaagtgtttgtgtataagttatttttgtaacaaaatgtaaaataaagtcgacttgttttcatataagctataag 15866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 11513817 - 11513906
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||| ||| ||||||||||||||||||     | |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11513817 ataagcacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttg 11513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 44606242 - 44606164
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||||| ||| ||||||||||||||||| ||||||  || ||||||||||||||||| | |||| ||||||||    
T  44606242 ataagcgcttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 9478221 - 9478302
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 185  Q
    |||||||||| ||||||||||||||||| ||||| | || ||  |||||||||||| ||||| ||||||||||||| |||||    
T  9478221 gcttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 35459834 - 35459907
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| || |||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  35459834 ttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataa 35459907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 2416246 - 2416318
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||| ||||| |||| |||||| |||||||    
T  2416246 aagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataag 2416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 17952853 - 17952774
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| ||||||||| ||| | |||| |||||| ||||| | || |||||||||||||||||||||| |||||||||||||    
T  17952853 aagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataa 17952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 25609729 - 25609804
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| ||||||||||| ||||| | ||  |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  25609729 aagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttg 25609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 3102617 - 3102695
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||| || || ||||||||||| ||||||| || ||||| |||||||||||||||| |||||| |||||| ||||    
T  3102617 ttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctat 3102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 189
Target Start/End: Complemental strand, 6926590 - 6926505
Alignment:
Q  103 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||||||||| || ||||||||||||||| |||| |  |  |||||||||||||| |||||||| ||||||||||| |||||||||    
T  6926590 cgcttatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataa-gtcaaattgttttcatataaactataagtt 6926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 10143105 - 10143179
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||| ||||||||||||||||| | || ||||||||||||| |||||||| | |||| |||||| |||||||||    
T  10143105 aagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtt 10143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 28803654 - 28803568
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| ||||| |||| ||||||||||||   || |||||||||||||||||||||| |  |||||||||| ||| ||||||    
T  28803654 gcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttg 28803568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 5045294 - 5045245
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  5045294 aagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 13630412 - 13630343
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||| | || |||||||||| ||||||||||| | ||||||||||| | ||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttg 13630343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 29430672 - 29430760
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||| |||||||||||| ||||||||||||| ||||| | || |||||| | ||||||||||||| | ||||| ||||| |||||||    
T  29430672 ataagcgtttatcatacaagggtttatgtataagctatttctataacaaaag-ttaaataaagtcaaactgttttcttataagctataag 29430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 42817530 - 42817449
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| |||||||| ||||||| || |||| ||||||| | |||||||||||||||| |||||||  | |||||||||||    
T  42817530 ataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataa 42817449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 3458598 - 3458654
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| |||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataa 3458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 3673734 - 3673814
Alignment:
Q  109 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||| ||||| |||||||| |||||||| | || ||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtt 3673814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 15173442 - 15173506
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 162  Q
    |||| |||||||| ||||||||| |||||||||||||||| | || |||||||| ||||||||||    
T  15173442 ataaacgcttatcgtacaagtgtctatgtataagttatttctataacaaaagatgaaataaagtc 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 18962184 - 18962104
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||  ||||| |||||||| || ||||||| || |||||||||||||||||| ||| | ||||||||||| ||||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 31740065 - 31740021
Alignment:
Q  146 aaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttg 31740021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 23143107 - 23143040
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23143040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 23554897 - 23554830
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23554830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 31461363 - 31461426
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatt 170  Q
    ||||||| ||||| |||| |||||| ||||| | || |||||||||||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 32694130 - 32694220
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||| |||| || ||||||||| ||||| | || |||||||||||||||| ||| | |||||| ||||||  |||||||||    
T  32694130 taagcgcttatcatataagtatt-atgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttg 32694220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 16946981 - 16947039
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  16946981 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 16947039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 17017646 - 17017704
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  17017646 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 17017704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 34339845 - 34339903
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||| |||||| |||||  | |||||||||||||||||||||||||||||| |||||    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataa 34339903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 39929804 - 39929874
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||| ||||||||||| || || ||||||||||||| || ||||||| |||| |||||| |||||||||    
T  39929804 gtttatttataagttattgttataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 43199356 - 43199422
Alignment:
Q  124 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||| |  | |||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttg 43199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 43808492 - 43808573
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttg-taccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||||| ||||||||||||||||| |||||||  || ||||  |||||||||||| ||| |||||||||||||    
T  43808492 ataagcgcgtatcatataagtgtttatgtataagctattttttataacaaac-ataaaataaagttaaactattttcatataa 43808573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 4026750 - 4026807
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||| |||| |||||| ||||||| || |||||||||||||||||| ||||||||||    
T  4026750 aagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 10150672 - 10150749
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||| ||||| ||| ||||||||||||||||||||||| | ||  |||||||||||||| || ||||  ||||||||    
T  10150672 taagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 35809852 - 35809927
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 177  Q
    ||||||||||||| ||||| |||||||||||||||||   |  | |||||||||||||| ||||||| |||||||||    
T  35809852 agcgcttatcatataagtgcttatgtataagttatttccatgac-aaagataaaataaaatcaaattgttttcatat 35809927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 43173189 - 43173225
Alignment:
Q  149 gataaaataaagtcaaattattttcatataacctata 185  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43173189 gataaaataaagtcaaattattttcatataagctata 43173225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 43431594 - 43431534
Alignment:
Q  102 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 162  Q
    |||||||||||| ||||||| |||||||||||||||   || ||||||||||| |||||||    
T  43431594 gcgcttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1939458 - 1939407
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 177  Q
    |||||||||||| | || |||||||||||||||||| ||| |||||||||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 11344421 - 11344350
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| ||||| ||||| ||||| | || |||||||||||| ||||||||||| |||||||| || ||||||    
T  11344421 aagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataa 11344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 35755639 - 35755564
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||| ||||| | ||   ||| | |||||||||||||||| ||||||| ||| ||||||||||    
T  35755639 aagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttg 35755564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 38239705 - 38239638
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||| || |||||  ||||||||||||||||| ||||| | || ||||||||||||| ||||||||    
T  38239705 ataagcactcatcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    ||||||||| ||||| | || ||||||||||| |||||||||||| ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 6547826 - 6547912
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||| ||||| || ||||||||||  |||||||||||||| | || ||||||  |||| ||||||||| |||||| |||||| ||||    
T  6547826 ataaccgcttttcttacaagtgttcgtgtataagttatttctatagcaaaagtcaaaacaaagtcaaaatatttttatataagctat 6547912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 6993832 - 6993786
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  6993832 caaaagataaaataaggtcaaattatattcatataagctataggttg 6993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Original strand, 7825185 - 7825243
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    |||||||| |||||||| ||||||| || ||||||||||| |||||| ||||| |||||    
T  7825185 aagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaatttttttc 7825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 10646396 - 10646362
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||||||||||||||| |||||    
T  10646396 aaaagataaaataaagtcaaattattttcctataa 10646362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 11863797 - 11863723
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| ||| ||||| |||||||| ||||| ||||  | |||||||||||||| ||| ||||| |||||||||||    
T  11863797 cttattatataagtggttatgtatgagttagttttacagcaaaagataaaatagagttaaattgttttcatataa 11863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 14209201 - 14209279
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||| |||||||| ||| |||| |||||   || |||||||||||||||| ||||| | ||||||||||| ||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 33197393 - 33197327
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||| ||||||||||| ||||| |||| |||||| ||||| | || ||||||||| |||||||||||    
T  33197393 ataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 33942112 - 33942158
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttg 33942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 37053511 - 37053601
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||| ||||||||| ||||| |||||||||   ||||| | || || || |||||||||||||||| | |||||||||||  ||||||||    
T  37053511 taagcacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtt 37053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 37292455 - 37292409
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||||    
T  37292455 caaaagataaaataaagtaaaactattttcatataagctattagttg 37292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 37766720 - 37766806
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| ||||| |||||||| || ||||  | |  ||||| |||||||||||||||| | ||||| ||||| ||||||||||    
T  37766720 gcttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttg 37766806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 40672942 - 40672872
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||  |||| |||||||||||||||||| | |   ||||||||||||||||||| ||| ||||||||    
T  40672942 ttatcatttaagtttttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcata 40672872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 1160846 - 1160809
Alignment:
Q  150 ataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataag 1160809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 3611159 - 3611216
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||| ||||||||||||||||| | || |||||| ||||||||||| ||||| ||||    
T  3611159 aagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 4550700 - 4550785
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||| | ||||| ||||||||||||| |||   ||  |||||||||||||| |||||  | ||||||||||| ||||||||||    
T  4550700 cttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttg 4550785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 173
Target Start/End: Original strand, 6988077 - 6988106
Alignment:
Q  144 caaaagataaaataaagtcaaattattttc 173  Q
    ||||||||||||||||||||||||||||||    
T  6988077 caaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 7282951 - 7283012
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||||||||| ||||||| ||  |||||| ||||| |||||||| | ||||||||    
T  7282951 aagtgtttatgtataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcata 7283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  109 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 162  Q
    ||||| ||||||||||||||||| ||||| | || |||||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15171183 - 15171244
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||||||||||| ||| | || || |||||||| |||||||||| | ||||||||    
T  15171183 aagtgtttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcata 15171244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 28039462 - 28039397
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| ||||| |||||| ||  || |||||||||||||||| |||| ||||||||||| |||||||    
T  28039462 tatgaataagctattttggttacacaagataaaataaagtccaattgttttcatataaactataag 28039397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 29503235 - 29503161
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    |||||| ||||| ||| ||||||||||||||| | ||||| | || |||  ||||||||||||||||| ||||||||    
T  29503235 ataagcacttattatagaagtgtttatgtatatgatatttctataacaa--gataaaataaagtcaaactattttca 29503161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 33944568 - 33944609
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctataa 33944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 35252268 - 35252207
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||||| || |||||||||||| ||||||  | ||  |||||||||||||||||||||||    
T  35252268 ttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaaatt 35252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 39983282 - 39983350
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| |||||| |||||||||| |||| | ||||||||| | |||| |||||||||||| ||||||||||    
T  39983282 ttatatataagctatttttgtaacaaagg-taaaataaaataaaataattttcatataagctataagttg 39983350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 41407246 - 41407291
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgtttt 41407291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 5043666 - 5043622
Alignment:
Q  146 aaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttg 5043622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 14666493 - 14666565
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    ||||||| ||||  || |||||||||||||||||||||| |  ||||||||||  ||||||||| || |||||    
T  14666493 ataagttgttttgataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaa 14666565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 22681310 - 22681250
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  22681310 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 22681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 23747243 - 23747295
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    ||||||||||| ||||||| || ||||||||||||| || | |||||||||||    
T  23747243 ttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttc 23747295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Original strand, 28933765 - 28933817
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    ||||||||| ||||| | || ||||||||||||| || |||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcat 28933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 44119723 - 44119763
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagt 161  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  44119723 ttatgtataagttatttttatagtaaaagataaaataaagt 44119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 44458483 - 44458415
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    ||||||| |||| |||||||||||| |||||||  | ||| ||||||| |||||||||  |||||||||    
T  44458483 tatcatataagtatttatgtataagctattttttcaacaacagataaactaaagtcaagctattttcat 44458415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 20 - 220
Target Start/End: Original strand, 11917404 - 11917597
Alignment:
Q  20 aaaataagaaatagaaaggggtattgatacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaat-aagcgcttatcatacaagt 118  Q
    |||||||||||||||||||||   | |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  11917404 aaaataagaaatagaaaggggg--tcatacatttgattcaacttagtcttgggacctgtttggaccaacatcttaaaaattaagcgcttatcatacaagt 11917501  T
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaata 218  Q
    ||||||||      |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11917502 gtttatgt------tatttttgtaacaaaagataaaataaagtcaaattattttcatataacctataagttgcttacaaaaattggttctcgtctaaata 11917595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 49219059 - 49219147
Alignment:
Q  102 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||  |||| ||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  49219059 gcgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttg 49219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 4071811 - 4071890
Alignment:
Q  110 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| |||||||||| ||||| | |||| | || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4071811 catataagtgtttatatataact-atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttg 4071890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 28582062 - 28581988
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    ||||| ||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||||||| ||||||||    
T  28582062 taagcacttatcatagaagtgtttatgtataaactattttt-tagcaaaagataaaataaagtcaaactattttca 28581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 42322016 - 42321941
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||||| ||||||| || |||| ||||||||||||||||||| |||||||||||  |||||||||    
T  42322016 aagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttg 42321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 186
Target Start/End: Original strand, 30024618 - 30024704
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| |||||||| ||||  ||||| ||||||||||| | || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  30024618 aagcgtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 19422335 - 19422420
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||||| || || ||||||||||||||||| | || ||||||||| ||||||||||||   ||||||||||| ||||    
T  19422335 taagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 55599082 - 55599149
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||| ||||| | |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  55599082 ataagcgcgtatcacataagtgtttatatataagttacttttgtaacaaaagacaaaataaagtcaaa 55599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 8422982 - 8422892
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    ||||||| | ||| ||||||||||| ||||||| ||  ||||||||||||||||||  ||| ||||||||||| |||||||||| || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgttttcacaa 8422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 24193501 - 24193593
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| ||||||||||| ||||  |||||||||||||||||||  | ||||| |||||| | ||| ||| |||||||||||||  |||||||||    
T  24193501 ataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaaactattttcatataagttataagttg 24193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 8130107 - 8130178
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| ||| |||| |||| ||| | || |||||||||| ||||||||||||||||||||||||| ||||||    
T  8130107 aagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataa 8130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 190
Target Start/End: Complemental strand, 13949949 - 13949906
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttg 13949906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 26883910 - 26884001
Alignment:
Q  98 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 188  Q
    ||||||||||||| | | ||||| ||||||||||||||||| | ||  || ||||||||| |||| ||||| ||||||||||| ||||||||    
T  26883910 ataagcgcttatcttgataagtgattatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagt 26884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 30207723 - 30207633
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| ||||||||| ||||| ||||||||| |||| || | || ||||| |||||||||| ||||| | ||||||||||| ||||||||||    
T  30207723 taagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 35743223 - 35743298
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||||| | ||||| ||||| ||||||||| | || ||||||||||||||||| |||| || |||||||    
T  35743223 agcgcttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaataaaggcaaactactttcata 35743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 44119295 - 44119228
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||||||| | || |||||||||||| ||||||||  | ||||||||||| ||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 52735068 - 52735119
Alignment:
Q  128 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| ||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataa 52735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 3549683 - 3549590
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 193  Q
    |||||| |||| ||| ||||| | ||| ||||||| | ||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  3549683 taagcgtttattatataagtgctaatgcataagtt-tctttataacaaaagataaaatcaaatcaaatgattttcatataacctatgagttgctt 3549590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 41606110 - 41606196
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgct 192  Q
    |||||||||||||||||||||| ||  ||||||  || |||| ||||||||||||||||||  || | |||||| ||||||| ||||    
T  41606110 ttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaatggttcttatataagctataagctgct 41606196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 51044596 - 51044546
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||| ||||| | || ||||||||||||||||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 54325184 - 54325102
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||| ||||| || |||||||  ||||| | |  |||||||||||||||||||||| | ||||||||||| |||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 4191657 - 4191734
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcata 176  Q
    ||||| |||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||| | ||||||||    
T  4191657 aagcgtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 10192235 - 10192292
Alignment:
Q  133 tatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||||  |||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttg 10192292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 22684666 - 22684589
Alignment:
Q  102 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||| || || || |||||||| ||||| | || |||| | ||||||||||||||||| |||||||||||    
T  22684666 gcgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataa 22684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 27623579 - 27623640
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||| ||||| | || |||||||||||||||||||||| |||||| |||||| |||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||||||||||  | ||| | || |||||| ||||||||||||||| |||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 40865746 - 40865806
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||  ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  40865746 tgtttatgtataaactatttttctaacaaaagatagaataaagtcaaa-tattttcatataa 40865806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  109 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    ||||| ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| ||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 163  Q
    |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 485997 - 486073
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttc 173  Q
    |||||||||||||||| ||||| ||||||||| | ||||| |  | ||||||||||||| ||||||||||| |||||    
T  485997 ataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaagtcaaattgttttc 486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 3249868 - 3249800
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 166  Q
    |||||||||||||||| |||||| ||||| |||||||||| | |   ||||||| ||||||||||||||    
T  3249868 ataagcgcttatcatataagtgtgtatgtgtaagttatttctatgataaaagatgaaataaagtcaaat 3249800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 24443954 - 24444046
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  24443954 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 24444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 32920543 - 32920462
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||| ||||||||||| ||||| ||||||| || |||  ||||||||||||||||||  |||| ||| || ||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataacaa--gataaaataaagtcaaatcgttttaatagaagctataagttg 32920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 45128464 - 45128376
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||| ||||||||| |||   ||||||||||  ||||| | || ||||||||||||| || |||||||||| |||||||| ||||||    
T  45128464 ataagcccttatcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataa 45128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 7022595 - 7022662
Alignment:
Q  109 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||| ||||| |||  |||||| ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  7022595 tcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaattattttcata 7022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 18630642 - 18630697
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| || |||||    
T  18630642 caaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaa 18630697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 137
Target Start/End: Original strand, 23819014 - 23819045
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttattt 137  Q
    ||||||||||||||||||||||||||||||||    
T  23819014 ttatcatacaagtgtttatgtataagttattt 23819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 24160644 - 24160557
Alignment:
Q  103 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||||| ||||  ||||| | ||| | || |||||||||| ||||| ||||| ||||||||| ||| ||||||||||    
T  24160644 cgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttg 24160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 32724081 - 32724116
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||| |||||||||||||    
T  32724081 caaaagataaaataaagtcaaactattttcatataa 32724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 44007983 - 44007940
Alignment:
Q  141 taccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44007983 taccaaaagataaaataaagacaaattgttttcatataagctat 44007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 46859892 - 46859935
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  46859892 caaaagataaaataaagtcaaatcattttcatacaatctataag 46859935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 6364088 - 6364154
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| | |||| |||| |||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataag 6364154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 15511483 - 15511425
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaa-aagataaaataaagt 161  Q
    |||||||||  ||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  15511483 gcttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaagt 15511425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 15969820 - 15969886
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgt-accaaaagataaaataaagtcaa 164  Q
    |||||| ||||  |||||||||||||||||||||||||||| | | | ||||||||| |||||||||    
T  15969820 taagcgtttatagtacaagtgtttatgtataagttatttttataaacgaaagataaagtaaagtcaa 15969886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 19040247 - 19040181
Alignment:
Q  120 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||| ||||| | ||  ||||||||||||||||||||| || ||||||| || ||||||    
T  19040247 tttatgtataagctatttctttagaaaaagataaaataaagtcaaaataatttcataaaagctataa 19040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 27321984 - 27321946
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttattt 137  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  27321984 taagggcttatcatataagtgtttatgtataagttattt 27321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 46013437 - 46013363
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46013437 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 46247151 - 46247225
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46247151 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 47119073 - 47119027
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||||||    
T  47119073 caaaagataaaacaaagttaaattgttttcatataagctataagttg 47119027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 189
Target Start/End: Complemental strand, 53192454 - 53192416
Alignment:
Q  151 taaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||||||||||||||||||| || |||||||||    
T  53192454 taaaataaagtcaaattattttcatagaatctataagtt 53192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 54414865 - 54414949
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataag---ttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||| ||||| |||||||||||   |||||||| ||   ||||| |||||||||||||  ||||||| |||||    
T  54414865 ataagcgcttatcatataagtgcttatgtataagctattatttttataaagaaagagaaaataaagtcaatctattttcctataa 54414949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 55437388 - 55437354
Alignment:
Q  150 ataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||||||||||||||||||||||| ||||    
T  55437388 ataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 24091434 - 24091467
Alignment:
Q  153 aaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||||||||||||||| ||||||    
T  24091434 aaataaagtcaaattattttcatataagctataa 24091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 24160929 - 24160998
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||||| | || |||| |||||||| |||| ||||||||||||| ||  ||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttg 24160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 24929416 - 24929501
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| || ||||| ||||| |  ||||| | || ||||||||||||||||||| || | |||||||| || ||||||||||    
T  24929416 cttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttg 24929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 25434567 - 25434522
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttg 25434522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 49803151 - 49803208
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||| | || ||||||||||||| |||| ||||| |||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttcacataa 49803208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 50745939 - 50746008
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| |||| ||||||| || |||||||||||||||| ||||| | |||| |||||| ||| ||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttg 50746008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 53626717 - 53626781
Alignment:
Q  125 gtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||| ||   |||||||||||||||| ||||| | ||||||||||| |||||||    
T  53626717 gtataagttatttttctataacaaaagataaaataaattcaaaatgttttcatataagctataag 53626781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 20936110 - 20936070
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  20936110 caaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 165
Target Start/End: Original strand, 21193937 - 21193981
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  151 taaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 27968072 - 27968120
Alignment:
Q  117 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||| || ||||||||||| || |||| |||||||||||||||||    
T  27968072 gtgtttatataaaagttatttttataacaaatgataaaataaagtcaaa 27968120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 29194524 - 29194476
Alignment:
Q  131 gttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||  |||||||||||||||| ||||| |||||||||||||    
T  29194524 gttattttcgtgacaaaagataaaataaaatcaaactattttcatataa 29194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 43372111 - 43372035
Alignment:
Q  110 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||| |||||||||   ||||| ||||||| || |||||||||||||| ||||||| | |||| |||||| ||||||    
T  43372111 catataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 55870459 - 55870403
Alignment:
Q  134 atttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| || |||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttg 55870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 41620437 - 41620365
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  41620437 ttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 2699192 - 2699303
Alignment:
Q  66 acttgggccctgtttggaccaacatcttaaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||||| |||||| |||   ||||||| ||||||| | |||| ||| |||||||||||| |  | ||||| |||||||||||| |||    
T  2699192 acttgggccctgtttggacaaacatcataat--taagcgcctatcatatacgtgtctatatataagttatttctacaacaaaatataaaataaagttaaa 2699289  T
Q  166 ttattttcatataa 179  Q
     |||||||||||||    
T  2699290 ctattttcatataa 2699303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 190
Target Start/End: Original strand, 38561645 - 38561734
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| ||| |||||| ||| |||||||||||| | || |||||||||||||||||||||| |||||| || ||  ||||||||||    
T  38561645 agcgcttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttg 38561734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 4558731 - 4558803
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||| ||||| | ||  ||||||||||||||||| ||||||||||||||||  |||||||    
T  4558731 aagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 31884510 - 31884598
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||||||||||  |||||||||||||||| | || ||||| ||||||| || |  |||| ||||||||||| ||||||    
T  31884510 ataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataa 31884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 38874570 - 38874643
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| || ||||||||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  38874570 ttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 38874643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 40728566 - 40728505
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||| ||||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  40728566 gcttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 1470985 - 1470921
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||| ||||| | ||  |||||||||||||||||||||||| |||||||||| |||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataag 1470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 11494075 - 11494155
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||| ||||| || |||||| ||||||||  || |||||||||| ||||||||||| | ||||||||||| ||||    
T  11494075 gcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatataaactat 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 14482124 - 14482192
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    |||||||||| ||||| ||||||||||  ||||| | || |||||||||||||||||||||||| ||||    
T  14482124 gcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 34788581 - 34788493
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||| || || ||| ||||||| ||||||| |  | |||||||||||||||||||| | ||| ||||||| ||||||    
T  34788581 ataagcgcttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 40357821 - 40357893
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||| |||| |||||||||||| | ||  | || |||||||||||||||||| ||||||||||||||    
T  40357821 gcttatcatataagtatttatgtataagctcttgatataacaaaagataaaataaagtaaaattattttcata 40357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 29056139 - 29056064
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| ||| ||||||||||||||||||| || || |  | ||||||||||||||||||||| || |||||||||||    
T  29056139 gcttgtcaaacaagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataa 29056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 40280356 - 40280281
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||||| |||||  ||| |||||||||||| |  | |||||||||||||||||| ||||| ||||||||    
T  40280356 agcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  125 gtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||||  ||||| |||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 34770854 - 34770900
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctataagttg 34770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 2364619 - 2364558
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||||| || | |||||||||| | ||||||| || ||||||||||||||||||||||||    
T  2364619 ttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaaatt 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 7026655 - 7026728
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||||| ||||| || | || || |||||||||||||||||| ||||| |||||||||||    
T  7026655 ttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataa 7026728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 35298624 - 35298539
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc-atataacctataagttg 190  Q
    |||||||| ||||| ||||||||||| |||||  ||| ||||||||||||||||| ||||   ||||| |||||| ||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttg 35298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 41336799 - 41336718
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| |||||| | || || |||||||||| | |||||| |  |||||||||||||| ||||||||| |||||||||||    
T  41336799 ataagcgtttatcaaataaatgcttatgtataaatcatttttatgacaaaagataaaatatagtcaaattgttttcatataa 41336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 42597340 - 42597409
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| |||||||  || ||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttg 42597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 11056821 - 11056729
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||| ||||||| ||| || || ||||| | || ||||||  ||||||||||  || ||||||||||||| ||||||||||    
T  11056821 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttg 11056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12225030 - 12224974
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 177  Q
    ||||||||||||||||| |    |||||||||||||||||||||| |||||||||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 29262979 - 29262947
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||||||||||||||    
T  29262979 aagataaaataaagtcaaattattttcatataa 29262947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 35869753 - 35869845
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  35869753 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 35869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 2100767 - 2100802
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||| |||||||||||||    
T  2100767 caaaagataaaataaagtcaaaatattttcatataa 2100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 29699178 - 29699237
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||| || || ||||||| ||||||||| | || ||||||||||||||||||||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 29973014 - 29973089
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| |||| |||||| ||||| | || || ||| ||||||||||||||| |||||||| |||| ||||||||||    
T  29973014 aagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttg 29973089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 39392815 - 39392748
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||| |||||||||| |||||  |||||||||  ||||| | || ||||||||||||||||||||||    
T  39392815 ataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 42237539 - 42237488
Alignment:
Q  135 tttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 3537139 - 3537093
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| ||||    
T  3537139 caaaagataaaataaagtcaaattgttttcgtataagctataggttg 3537093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 3945207 - 3945281
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||| ||||||||||||   || |||||||||||||||| | ||  |||||| |||||| |||||||||    
T  3945207 aagtgtttatatataagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Original strand, 12361131 - 12361197
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| |||||||||||| | ||   ||||||||||| |||||||||| ||||||||||| |||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataag 12361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 14949812 - 14949882
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||||||  ||||||||||| || || | || |||||||||||||| ||||||| | ||||||||    
T  14949812 ttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 26215435 - 26215493
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||| ||||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 27728128 - 27728094
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||||||| |||||||||||||    
T  27728128 aaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 31315598 - 31315533
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    |||||||| |||||||  |||||||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  31315598 ttatcata-aagtgttagtgtataagctatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 34563174 - 34563244
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||| ||||| |||| |||||||||||| | |  |||| |||||||||||||||||  |||||||||    
T  34563174 ttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 1112785 - 1112858
Alignment:
Q  114 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||| ||||||||| | ||||| | || ||||||||||||||| || ||||| |||||| |||| |||||||    
T  1112785 caagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataag 1112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 187
Target Start/End: Complemental strand, 28769493 - 28769404
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| |||||||||| || || ||||||||||| ||||  | || ||||  ||||||| |||||||| ||||||| ||||| |||||||    
T  28769493 ataagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataag 28769404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 31705025 - 31705090
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataag 187  Q
    ||||||||| ||||| ||||| |||||||||||| | |||||||||  |||||||||| |||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataag 31705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 187
Target Start/End: Complemental strand, 33209366 - 33209285
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||| |||  ||||| ||||| | ||   ||||||||||||||||| || | ||||||||||| |||||||    
T  33209366 ttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataag 33209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 787252 - 787172
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||  ||||| |||||| |||| | |||  ||| || ||||||||||||||||||||| || |||||||| ||||||    
T  787252 ttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 4510945 - 4511025
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||| ||| || |||| |||||| ||||||   | |||||||| ||| ||||||||||| || ||||||||    
T  4510945 taagcgcttatcatgcaattgcttatttataagctattttgtaaacaaaagattaaaaaaagtcaaatttttctcatataa 4511025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  151 taaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 10062262 - 10062218
Alignment:
Q  117 gtgtttatgtataagttatttttgtaccaaaagataaaataaagt 161  Q
    ||||||||||||||||||||| | |||||||||| || |||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaagaaaagataaagt 10062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 10939325 - 10939385
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaag 160  Q
    |||| ||||| |||| | |||||||||||||||||||| | |  |||||||||||||||||    
T  10939325 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataaag 10939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 11376670 - 11376714
Alignment:
Q  149 gataaaataaagtcaaattattttcatataacctataagttgctt 193  Q
    |||||||||||||| ||||||||| |||||| ||||||| |||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctt 11376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 35374479 - 35374439
Alignment:
Q  146 aaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  35374479 aaagataaaataaagttaaattgttttcatataagctataa 35374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 35135816 - 35135725
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||| ||||| |||| ||||||||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||    
T  35135816 ataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 4991097 - 4991016
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| |||||||| |||||||| |||||||| ||||||| || |||||||||| ||||  |||| ||||||||||||||    
T  4991097 ataagcgattatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatataa 4991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 36539669 - 36539754
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| ||||| |||||| |||| ||||| | || |||||||||||||||||||||  | ||||||||||| ||||||||||    
T  36539669 cttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttg 36539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 7096271 - 7096203
Alignment:
Q  108 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||  |||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 9927501 - 9927593
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| |||||||   ||||||||||||||||||||||| | ||  |||||||||||| | |||||||| ||||||||||| | ||||||||    
T  9927501 ataagcacttatcaagtaagtgtttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttg 9927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 32059735 - 32059654
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||| ||||| ||||||||||| | |||||||| | || ||||||||||||||||| | ||||||||||| |||||||    
T  32059735 cttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataag 32059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 5284827 - 5284762
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||||||||||  | || ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  5284827 taagcgcttattgtgcacgtgtttatgtatatgctatttttgtaacaaaagataaaataaagtcaa 5284762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 184
Target Start/End: Complemental strand, 29117083 - 29116998
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||||| |  || ||||||||| ||||||| | || |||||||||||||||||||||| | ||||| ||||| ||||    
T  29117083 taagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 32172569 - 32172658
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||||| | ||||||||||  ||||| |  | ||||||||||||| ||||||| || ||| ||||||| |||||||    
T  32172569 ataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataag 32172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    ||||||||||| ||| | | || |||||||||||||||||||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 912802 - 912710
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc-aaattattttcatataacctataagttg 190  Q
    |||| |||||||||| ||| ||||||| ||||||||||| | || || || ||||||||||||| ||||| ||||||||||| | ||||||||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttg 912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 9202885 - 9202821
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| |||| |||||| ||||| |||| |||||||||||||||||| ||||| |||||||||||    
T  9202885 aagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataa 9202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 42181245 - 42181145
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacaca 198  Q
    ||||||||||||| | ||||  | |||| | || ||||||| || |||||||||||| ||||||||||  ||||||||||| |||||||||| || ||||    
T  42181245 taagcgcttatcacataagtaataatgtgtcagctatttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcaca 42181146  T
Q  199 a 199  Q
    |    
T  42181145 a 42181145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 34117669 - 34117595
Alignment:
Q  116 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 193  Q
    |||| ||||||||||||||||| | || ||||||||||||||| ||   ||||||| ||||||| |||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctt 34117595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 37063222 - 37063147
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| ||||| || || ||||||||||  ||||| | || |||||||||||||||||||||| |||||||||||||    
T  37063222 gcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataa 37063147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 12407813 - 12407752
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 161  Q
    ||||| ||||||||||||||||| ||||||||| ||||| | || ||||||||||||||||||    
T  12407813 taagctcttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 18704179 - 18704098
Alignment:
Q  108 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||  ||||||||||||||||| | || |||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttg 18704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 164
Target Start/End: Complemental strand, 20982289 - 20982223
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    ||||| |||||||||| ||||| ||||||||||| ||||| | || |||| ||||||||||||||||    
T  20982289 ataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 38766998 - 38766920
Alignment:
Q  97 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    ||||||||||||| ||| ||||||| ||| || |||||||| | || |||||| ||||||||||| ||| |||||||||    
T  38766998 aataagcgcttatgatataagtgttaatggatgagttatttctataacaaaagctaaaataaagttaaactattttcat 38766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 6734038 - 6733966
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||||||||| ||||  ||||||| || | |||||||||||||||| ||||| |||||||||||    
T  6734038 ttatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt-aaattgttttcatataa 6733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 26516214 - 26516275
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    |||||||||||||||| ||||| ||||||||||| ||||| |  | ||||||||||||||||    
T  26516214 ataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 36796836 - 36796771
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||| || | ||||| ||||||||| || |||||||||||| |||| |||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataag 36796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 39823276 - 39823183
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| | ||| ||| | |||||||| || |||||| | || |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  39823276 ataagcgcttgttatagaagggcttatgtatcagattatttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttg 39823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 187
Target Start/End: Original strand, 10907312 - 10907384
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||||||||| | || | || | ||||||||| ||||| || |||||||||| |||||||    
T  10907312 aagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataag 10907384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 11835192 - 11835268
Alignment:
Q  98 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    |||| |||||||||| | ||||||||||||||||   |||||| || |||||||||||||||||| ||||| |||||    
T  11835192 ataaacgcttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 32969225 - 32969185
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  32969225 caaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 35095936 - 35095868
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    ||||||||||||||| ||||| |||| | |||  ||||| | || ||||||||||||||||||||||||    
T  35095936 taagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaatt 35095868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 35960338 - 35960421
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||| |||| |||||| ||||  ||||| | ||  ||||||||||||||||||||| || |||||||||| ||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttg 35960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 1636891 - 1636844
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||| ||||||||||| |||| || |||||||||||||||||||    
T  1636891 tgtttatgaataagttatttctgtatcacaagataaaataaagtcaaa 1636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 6739788 - 6739855
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||| |||||||| ||| |||||||||||||| |||| | ||   ||||||||||||||||||||    
T  6739788 ataagcgtttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaaa 6739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 8158409 - 8158374
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||| |||||||||||||||||    
T  8158409 caaaagataaaataaagttaaattattttcatataa 8158374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 9703365 - 9703302
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| |||| ||| |||||||||||||||||| |  |||||||||| ||| ||||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttg 9703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 10303763 - 10303802
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataaccta 183  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10303763 caaaagataaaataaagtcaaattgttttcatttaaccta 10303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 14295468 - 14295511
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  14295468 caaaagataaaataaagtcaaactgttttcatataagctataag 14295511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 17756875 - 17756808
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    |||||||| ||||| |||||||| |||| ||| | || || ||||||||||||||||||||| |||||    
T  17756875 ttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 35550911 - 35550953
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35550911 caaaagataaaataaagtc-aattattttcatataaactataag 35550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 39750105 - 39750140
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||| |||||||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataa 39750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 3952061 - 3952104
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  3952061 aaaagataaaataaagacaaatt--tttcatataacctataagttg 3952104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 38033890 - 38033940
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaa 154  Q
    |||||||| | ||||||||||||||||||||||| | || |||||||||||    
T  38033890 gcttatcaaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 40048417 - 40048359
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    ||||| ||||||||||||| ||| | || |||||||||||||||||| | |||||||||    
T  40048417 aagtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 4855637 - 4855706
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||| || ||||||| || ||||| |||||||||||| ||||| || ||||||||  |||||||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttg 4855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 10272538 - 10272493
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttg 10272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 10391276 - 10391329
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataa 158  Q
    ||||||||| ||||| ||| ||||||| ||||||| || |||||||||||||||    
T  10391276 cttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Original strand, 11615452 - 11615493
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||| ||||||| || ||||||||||||||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaatt 11615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    |||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 14932223 - 14932280
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||||| ||||||||  ||||||| || |||||||||||||||||| ||||| ||||    
T  14932223 aagtgttcatgtataatctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 34205206 - 34205247
Alignment:
Q  149 gataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||||||||||| |||||| ||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttg 34205247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 186
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||| || || | || |||||||||||||||||||||||| || ||| |||| ||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 12595848 - 12595808
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  12595848 caaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 17498668 - 17498712
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  17498668 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 17498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 19177403 - 19177487
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||| ||||| ||||||||||  ||||| |  | || |||||||||| ||||| || | ||||||||||| ||||||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttg 19177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 21782706 - 21782654
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||||||||| |||| ||||| | || |||||| |||||||||||||||||    
T  21782706 aagtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaatt 21782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 28586911 - 28586839
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| | ||| |||||||||   ||||| | || |||||||||||||||||||||| | |||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 40534110 - 40534193
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtacc--aaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||| |||   ||||||||||| ||||| | |||   ||||||| ||||||| ||| |||||||||||||||    
T  40534110 ataagcgcttatcatataaggacttatgtataagctatttctatacacgaaaagatgaaataaaatcacattattttcatataa 40534193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 37788786 - 37788868
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttatttta-taacaaaagataaaataaagtccaattattttcgtataatctataagttg 37788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 38462204 - 38462277
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    ||||||||| |||||||||| |||||| ||||| | ||||||||||||||||||||||||| | ||||||||||    
T  38462204 cttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||||||||||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 16790502 - 16790432
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||| ||||| ||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 29771751 - 29771817
Alignment:
Q  124 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||| | |||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  29771751 tgtataagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttg 29771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 33307727 - 33307653
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||| ||||| ||||||||||| |||||  ||| ||||| || |||||||||||||||||||||||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataa 33307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 36783488 - 36783402
Alignment:
Q  100 aagcgcttatcat-acaagtgtttatgtataa-gttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||| | |||||||||||||||| | ||||| | ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36783488 aagcgcttatcatgataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactat 36783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 188
Target Start/End: Complemental strand, 43116574 - 43116492
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 188  Q
    ||||||||||||||||||||| |||| ||||| | || ||||||||||||| || |||||  |||||||||||| ||||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagt 43116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 3182515 - 3182438
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||| |||||||||  |||||||||||||||||||| || | ||  ||||||||||||||||||||||| ||||||||    
T  3182515 taagtgcttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 20349629 - 20349549
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| |||||||||| |||||||| |||||||| |||||  ||| |||| |||||||| ||||| ||||||||||||||||    
T  20349629 taagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataa 20349549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 44374792 - 44374720
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||| ||||| ||||||||||| ||| | | || |||||||||||||||||||||||| ||||||||    
T  44374792 gcttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 49772815 - 49772747
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||| ||||||||||||| |||| |||||    
T  49772815 cttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttc 49772747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 48397587 - 48397654
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||| || ||| ||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttg 48397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 22214833 - 22214743
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| |||||| || |||||  ||||||||| |||||| | || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22214833 aagcacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttg 22214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 28779274 - 28779364
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||| || || || |||||||| | ||||| || ||  |||| ||||||||||||| ||||||||||||| ||||||||||    
T  28779274 aagcgcttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttg 28779364  T

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Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 32555089 - 32555043
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  32555089 caaaagataaaataaagtcaaattattttcctataagctataagttg 32555043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 3757981 - 3758042
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||| ||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||    
T  3757981 aagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttcata 3758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 4990691 - 4990630
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||||    
T  4990691 tgtttatgtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataa 4990630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 187
Target Start/End: Complemental strand, 20192743 - 20192671
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| ||||||||||| ||||| | || ||||||||||||||||||||||   ||||||||||| |||||||    
T  20192743 aagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataag 20192671  T

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Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 32703062 - 32703142
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||| || |||||||||||||| ||||| | |   ||||||||||||||| ||||||| ||||||||||| ||||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 37689509 - 37689450
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| ||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 39971242 - 39971309
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||||||| ||||| |||||||||||||| || | || ||||||||||||||||| |||||| ||||    
T  39971242 cttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 24235811 - 24235745
Alignment:
Q  124 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||| | || |||||||||| ||||||||||| |||||  |||||| ||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttg 24235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 24605153 - 24605103
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  24605153 aagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaa 24605103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    |||||||||||||||||   || |||||||||||||||||||||||| |||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 16790242 - 16790181
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    ||||||| |||||||| ||||| |||| |||||||||||| | || ||||||||||||||||    
T  16790242 ataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 22232742 - 22232823
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||| ||||||||| || || | ||||||||| ||||| | || |||| ||||||||||||||||| | |||||||||||    
T  22232742 ataagctcttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataa 22232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 24268309 - 24268228
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatata 178  Q
    ||||||| |||||||||||||| ||||||||||  ||||| | || |||||| |||||| |||||||| || ||||||||||    
T  24268309 ataagcgtttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaaactttttttcatata 24268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 25195386 - 25195419
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatat 177  Q
    ||||||||||||||||||||||||||||||||||    
T  25195386 caaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 27792796 - 27792869
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||||||||||| |||||    | ||||||||||||||| |||||| |||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataa 27792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 53736251 - 53736186
Alignment:
Q  114 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||| ||| |||| |||||||| | || ||||||||||||||| |||||| |||||||||||||    
T  53736251 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 53736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 54775052 - 54775125
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 2865765 - 2865721
Alignment:
Q  146 aaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  2865765 aaagttaaaacaaagtcaaattgttttcatataacctataagttg 2865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 8142847 - 8142803
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  8142847 aagtgtttatgtataagctatttttatatcaaaagataaaataaa 8142803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 10101601 - 10101549
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 10212526 - 10212474
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 21574408 - 21574495
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||| ||||| ||||  |||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||| ||| ||||||| ||||||    
T  21574408 ataaacgcttctcatgtaagtgtttatgtatgagttgtttttatac-acaagataaaataaagttaaattgtttacatataagctataa 21574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 23530322 - 23530246
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataagttg 190  Q
    ||||| ||| ||| ||| || |||| || ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23530322 aagtgcttacgtagaagctagttttctaacaaaagataaaataaagtcaaattatttttcatataaagtataagttg 23530246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 30669104 - 30669036
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||| ||||||| || ||||||||||||||| ||  |||| ||||| ||||| ||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataatgttgaatttttttcttataaactataa 30669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 36646527 - 36646455
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||| || |||||| ||||| | |  ||||||||||||||||||  |||| |||||||||||    
T  36646527 tatcatacaagtgttgatatataagctatttctatgacaaaagataaaataaagtataattgttttcatataa 36646455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 164
Target Start/End: Complemental strand, 41028999 - 41028939
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||||||||| ||||| ||||||||||| ||||| | || ||||||| |||||||||||||    
T  41028999 gcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 32663566 - 32663636
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 177  Q
    ||||||||||| |||||||| ||||||||||| | || |||||||| |||||| ||||||  ||||||||||    
T  32663566 ttatcatacaattgtttatgcataagttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 36283703 - 36283659
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  36283703 gtttatgtataagttatttttgta--acaagataaaataaagtcaaa 36283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 25129748 - 25129833
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 185  Q
    ||||| |||| ||||||| || |||||||||| |||||  | |||||||||||| |||||||||||| |  |||||||||| |||||    
T  25129748 taagcacttaccatacaa-tgcttatgtataacttattcctataccaaaagatacaataaagtcaaactgctttcatataatctata 25129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 26990696 - 26990730
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatata 178  Q
    |||||||||||||||||||||||| ||||||||||    
T  26990696 caaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Original strand, 36101490 - 36101576
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||| | ||||| ||||| ||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  36101490 gcttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttg 36101576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||| ||||| | || |||||||||||||||||||||| | ||||||||||| ||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 53457301 - 53457371
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||  ||||||||| ||||||| || ||   || |||||||||||||||||||||| ||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 2128384 - 2128331
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    ||||||||||||| ||||| | || |||||||||||||||||| ||||| ||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 3467491 - 3467450
Alignment:
Q  149 gataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttg 3467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 9279480 - 9279439
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttattttt 139  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  9279480 ataagcgcttatcatataagcatttatgtataagttattttt 9279439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 25183134 - 25183053
Alignment:
Q  107 tatcatacaagtgttta-tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||| ||||||||| |||||||  ||||||| || |||||||| ||||||||| ||  ||||||||||| | |||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataag 25183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 26599140 - 26599185
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  26599140 caaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 28283730 - 28283653
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||| |||||||| ||||| ||||| |||||||| || | || |||||||||||   |||||||| ||||||||||    
T  28283730 taagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaatgtaagtcaaactattttcata 28283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 33882969 - 33883018
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    |||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 40122883 - 40122815
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| |||||   || |||||||||||||||||||||| | |||||||| || ||||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttg 40122815  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 41159030 - 41159091
Alignment:
Q  103 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||||||| || ||||| ||||||||||||||||  | || | |||||||||||||||||||    
T  41159030 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 49546624 - 49546575
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    ||||| |||||| |||| ||||||| || |||||||||||||||||||||    
T  49546624 aagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 49739483 - 49739544
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    |||||||||| ||||| ||||| | ||||||||| |||||||  | ||||||||||||||||    
T  49739483 ataagcgcttttcatataagtggtgatgtataagctatttttacatcaaaagataaaataaa 49739544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||| ||||||||||| ||||||| || ||||||||| |||||| | ||| ||||||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 905115 - 905043
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| ||| | ||| ||||||| ||||| | || ||||||||||||||||||||| || ||| |||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataa 905043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 8007837 - 8007761
Alignment:
Q  110 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||| | ||||||||||| | ||| | || ||||||||||| |||||||||| | || |||||||| ||||||    
T  8007837 catacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 10357378 - 10357430
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| | || ||||||||||||||| || ||||| |||||||||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataa 10357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| ||||| | || |||||||||||||||||| ||||| |||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 23315591 - 23315631
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataag 23315631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 25964359 - 25964419
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    |||| |||||||||| ||||  || |||||||| ||||||| || ||||||||||||||||    
T  25964359 taagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaataaa 25964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 28843011 - 28842971
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttt 138  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  28843011 ataagcgcttatcatataagtgcttatgtataagctatttt 28842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 42039092 - 42039140
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 163  Q
    ||||| ||||||||||| ||||| |||| ||||| ||||||||||||||    
T  42039092 aagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 42809242 - 42809298
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||| ||||| | || |||||||||||||| ||| ||||| |||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataa 42809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 3217344 - 3217263
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| |||||||| ||||| ||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||    
T  3217344 ataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataa 3217263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 32975894 - 32975961
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32975894 ataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 24836336 - 24836262
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  24836336 aagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 29274376 - 29274295
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||| || || ||||||||||| ||||| | || |||||||||||||||||||||||| ||||||||||| ||||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 2027530 - 2027471
Alignment:
Q  128 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataag 2027471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 22742282 - 22742371
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||| || ||||  |||| |||||| ||||| | || |||| ||||||||||||||||||| ||||||||||| |||||||    
T  22742282 ataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 10452505 - 10452422
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||  |||| ||||||||||| ||||| | || ||||| |||||||||| ||||| ||||||||||||| ||||||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttg 10452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 28531694 - 28531627
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 166  Q
    ||||||||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||||||||    
T  28531694 taagcgcttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaat 28531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 27595674 - 27595630
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  27595674 aaaagataaaataaagtcaaattattttcatataagctgtaagtt 27595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 4006647 - 4006722
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| ||||| ||||| ||||| | || |||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  4006647 aagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttg 4006722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 11340777 - 11340687
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  11340777 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 11340687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 2206506 - 2206592
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||| |||||| || |||  ||| |||||||||||||||| || ||||||||||||||||||  |||| |||| |||||| ||||    
T  2206506 ataagctcttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 7785866 - 7785808
Alignment:
Q  128 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||| || | ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  7785866 taagttacttatataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 179
Target Start/End: Complemental strand, 8349811 - 8349737
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||| |||||||| |||||||  ||||| | || |||||||||||||||||| ||||| |||| ||||||    
T  8349811 cttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataa 8349737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 10032494 - 10032576
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||| || |||||||||||||| ||||||| || ||| || | |||||||| |||| || |||||||||| |||||||    
T  10032494 cttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 2514624 - 2514709
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||  ||||| ||||||||||| ||||| | ||  ||||||||||||||||||||| || ||| |||| | |||||||||    
T  2514624 gcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtt 2514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 3155092 - 3155181
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||| |||||||| || || ||||||||||| ||| | | |  |||||||||||| ||||||||| | ||| |||||||||||||||    
T  3155092 ataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataag 3155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 4248874 - 4248943
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||||||| ||||| ||||| |||| |||||| |||||   || ||||||||||||||||||||||||    
T  4248874 ataagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaatt 4248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 5328898 - 5328971
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 10400186 - 10400274
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcatataacctataag 187  Q
    |||| |||||||||| || |||||||||||||| || |||| ||  ||||||| |||||||||||||||| || |||||||| |||||||    
T  10400186 taagggcttatcatataaatgtttatgtataagcta-ttttataataaaagataaaaataaagtcaaattgttatcatataagctataag 10400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 10749381 - 10749301
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| |||||||| |||   |||||||||||| |||| | ||  ||||||||||||||||| |||||||||||||||||    
T  10749381 ataagcgtttatcatataagatgttatgtataagt-atttctataataaaagataaaataaagttaaattattttcatataa 10749301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 31672621 - 31672544
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||| |||||||||||||||||||||||||  |||||   |  ||||| |||||||||||||||| | ||||||||    
T  31672621 taagcgattatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttcata 31672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 33068715 - 33068634
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||| | || || ||||||||||||||||| | || |||||||||||||||  ||||| | |||||| ||||    
T  33068715 ataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataa 33068634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 156
Target Start/End: Complemental strand, 5554917 - 5554861
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 156  Q
    |||||| ||||||| | ||||||||||||||||||||| | || |||||||||||||    
T  5554917 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 7713950 - 7714022
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| ||| | ||||||||||  || |||  || |||||||||||||||||||||||| |||||||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataa 7714022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 20672002 - 20671938
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| ||||||||||| ||||| |  | |||||||||||||||||||||||| ||||| |||||    
T  20672002 aagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataa 20671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 21959652 - 21959732
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||| ||||| ||| ||||||| |||||   || ||||||||||||||||||||| || ||| ||||||| ||||||    
T  21959652 ttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 179
Target Start/End: Complemental strand, 27693544 - 27693512
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||||||||||||||    
T  27693544 aagataaaataaagtcaaattattttcatataa 27693512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 281956 - 281913
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  281956 caaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 7354126 - 7354201
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| |||||||||| || ||||||||  ||||| | || |||||||||||||||| || || |||||||||||||    
T  7354126 gcttttcatacaagttttcatgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataa 7354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 27713469 - 27713504
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||||| |||||||||||    
T  27713469 caaaagataaaataaagtcaaattcttttcatataa 27713504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 27857319 - 27857358
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  27857319 tataagttacttttgtaacaaaagataaaataaagtcaaa 27857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 32513759 - 32513821
Alignment:
Q  116 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||| |||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaa-ataaaataaagtcaaactatttccatataa 32513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 1402958 - 1403000
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  1402958 caaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 2117365 - 2117411
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  2117365 caaaggataaaacaaagtcaaactattttcatataatctataagttg 2117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 6078443 - 6078365
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||||||||||| ||| ||| |||| || ||||| | |  || ||| ||||||||||||||||| ||||||||    
T  6078443 ataagcgcttatcatacatgtggttacgtatgagctatttctatcacagaaggtaaaataaagtcaaattgttttcata 6078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 187
Target Start/End: Complemental strand, 9093687 - 9093621
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| ||||| ||||| | || |||||||||||||||||| ||||| ||||| ||||| |||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataag 9093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 24476541 - 24476599
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||| | || |||||||||||||  ||| |||||||||||||||||    
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataa 24476599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 28660234 - 28660160
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttcatata 178  Q
    ||||||||| |||||||||| ||||| |||||||| |   |||||||||||| ||||||||||| |||| |||||    
T  28660234 cttatcatataagtgtttatatataaattatttttatgataaaagataaaataaaagtcaaattgttttgatata 28660160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 28660879 - 28660833
Alignment:
Q  133 tatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| || ||| |||||||||||||| |||||||||||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatataa 28660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 34429826 - 34429752
Alignment:
Q  116 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| ||||||||||||||||| | ||  || ||||||||||||||| || | ||||| ||||| ||||||||||    
T  34429826 agtgattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 1497903 - 1497976
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgta-ccaaaagataaaataaagtcaaattattttcatat 177  Q
    ||||||||  ||||| |||||| |||| ||||||| || ||||||| ||||||||||||||| | |||||||||    
T  1497903 cttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatat 1497976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 2732341 - 2732312
Alignment:
Q  150 ataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||||||||||||||||    
T  2732341 ataaaataaagtcaaattattttcatataa 2732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 4325454 - 4325381
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| |||||| |||||||||| | ||  ||| ||||||||| || |||| |||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataa 4325381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 8420345 - 8420284
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||| ||||| ||||||| ||||||||| | ||  ||| |||||||||||||||||    
T  8420345 gcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 11363475 - 11363430
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttg 11363430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 2027931 - 2027891
Alignment:
Q  125 gtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  2027931 gtataagctatttttgtattaaaagataaaataaagtcaaa 2027891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 2034579 - 2034512
Alignment:
Q  111 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||| ||||||||||| | |||||  | |||| ||||||||||||||||| || ||||||||||    
T  2034579 atacaagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 2034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 9559672 - 9559620
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 173  Q
    ||||||||||||||||| | || |||||||||||||||| | ||||| |||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttc 9559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 29940725 - 29940789
Alignment:
Q  111 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    ||||||||| ||| ||||||| | ||| | || ||||||||||||||||||||| || |||||||    
T  29940725 atacaagtgcttaagtataagctttttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 33116538 - 33116578
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaa 155  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  33116538 aagtgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 27492 - 27584
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||||||  ||||| ||||||||||||||||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  27492 ataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttg 27584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 21409 - 21351
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| ||||| ||||| |||||    
T  21409 ttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataa 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 4200145 - 4200232
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 185  Q
    |||||| ||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||    
T  4200145 ataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 15360826 - 15360902
Alignment:
Q  114 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||| |||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  15360826 caagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttg 15360902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 188
Target Start/End: Complemental strand, 45990211 - 45990122
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 188  Q
    |||| ||||||||||||| || | ||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  45990211 taagagcttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 870962 - 871042
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||| ||||| ||||||||||  ||||||| || ||||||||||||| ||||||| || |||||||||||    
T  870962 taagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataa 871042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 28467456 - 28467369
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||| ||||||||||  ||||| ||||   |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28467456 cttatcatacaggtgattatgtataacctatttgtgtataacaaaagataaaataaagtcaaattattttcatataagctacaagttg 28467369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 7274093 - 7274015
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||| |||||||||| || || ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||    
T  7274093 ataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 49516985 - 49517075
Alignment:
Q  98 ataagcgcttatcatacaagt-gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||||| |||||||| || | |||| |||||||||||||| | || |||||||||||||||||||||||| ||||||| ||| |||||||    
T  49516985 ataagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataag 49517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||| |||||||||||||||||   ||| | || |||||| ||||||||||||||||| ||||||||||| ||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 48830210 - 48830142
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||||||| | |  | |||||||||||||||||||| ||||||||||||| ||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 289168 - 289225
Alignment:
Q  110 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||| ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  289168 catataagtgcttaagtataagctatttttgtagcaaaagataaaataaagtcaaatt 289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 17269177 - 17269258
Alignment:
Q  109 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| ||||| ||||||||||||||||| |  | ||||||  |||||||||||||||| ||||||||||| | ||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttg 17269258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 29007847 - 29007778
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| |||||||||| | || ||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttg 29007778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 43372113 - 43372025
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||| ||  | ||||||||| | ||||| | || ||| |||||||||| |||||||||||||||| |||| ||||||    
T  43372113 ataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 16982090 - 16982027
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 161  Q
    ||||| |||||||||| |||||||||||||||| ||||||   || ||||||||||||||||||    
T  16982090 ataagagcttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 29794057 - 29793991
Alignment:
Q  117 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||| |||||| |||| ||||    
T  29794057 gtgtttatgtataggctatttttgtaacaaaagataaaat-aagtcaaattgttttcaaataagctat 29793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 185
Target Start/End: Original strand, 50998468 - 50998555
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 185  Q
    ||||||| |||||||| | | | ||||||||||| ||||| |||| |||||||||||| ||| ||||| || |||||||||| |||||    
T  50998468 ataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 27738288 - 27738246
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctataa 27738246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 30371110 - 30371156
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  30371110 caaaagataaaataaactcaaattgttttcatataagctataagttg 30371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 33339566 - 33339500
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 172  Q
    |||||||| | ||||||||||||||| ||||| | |||||||||||||||| |||| ||| ||||||    
T  33339566 ttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagttaaactatttt 33339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 4256177 - 4256108
Alignment:
Q  117 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||| ||||| |  | ||||||||| |||||||| ||||||||||| ||||| ||||||    
T  4256177 gtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 7218181 - 7218136
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagttg 7218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 44936713 - 44936656
Alignment:
Q  129 aagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||| | || |||||||||| ||||||||||| ||||||||||||| ||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 46980275 - 46980202
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| |||||  |||| ||||||| ||||| || ||||||||||||||||| |||| | |||||||||||    
T  46980275 ttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataa 46980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 49557064 - 49557149
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||| ||||  | ||||| ||| ||||||||||    
T  49557064 cttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttg 49557149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 52286597 - 52286682
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||| ||| | ||||| ||||| ||||| |  | |||||||||||||||||| |||  |||||||||||| ||||||    
T  52286597 agcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 1233029 - 1232965
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||| ||||| | ||||| || ||||| |||||||||||| ||||||||||| |||||    
T  1233029 aagtgtttatgcataagctgtttttataacaaaacataaaataaagttaaattattttcgtataa 1232965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 1730825 - 1730881
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 171  Q
    ||||| ||||||||||| ||||||| || | |||||||||||||||||||| |||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaactattt 1730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 10439648 - 10439688
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctat 184  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctat 10439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 11218235 - 11218175
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    |||||| |||||||| ||||||||||||||||||||||| | |  |||||||| |||||||    
T  11218235 taagcgtttatcatataagtgtttatgtataagttatttatatgtcaaaagattaaataaa 11218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 11560686 - 11560622
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||| ||||||| ||||||| || ||||||||||||| || ||||||| |||| ||||||    
T  11560686 aagtgtttaggtataagctatttttatagcaaaagataaaatcaaatcaaattgtttttatataa 11560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  128 taagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 15361678 - 15361718
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  15361678 aagataaagtaaagtcaaattattttcatataagctataag 15361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 17420119 - 17420207
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||| || | ||||  ||||||||||  ||||||| ||  |||||||||||||||||| ||  |||||||||||| ||||||    
T  17420119 ataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 23895252 - 23895332
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||| ||||||||| ||||  ||||||||||| ||||| | || |||||||||||||||| ||||| | || |||||||    
T  23895252 ataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 29723454 - 29723506
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  29723454 aagataaaataaactcaaactattttcatatatgctataagttgctttcacaa 29723506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 36641814 - 36641862
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattat 169  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 42336583 - 42336659
Alignment:
Q  103 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| ||||||  |||| ||||||||| ||||||||| || ||||| |||||||||||||||   ||||||||||||    
T  42336583 cgctcatcatattagtgcttatgtataggttatttttataacaaaaaataaaataaagtcaagcaattttcatataa 42336659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 4215311 - 4215374
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||| |||||||||||||  || |||| ||||||||||||||||| | ||||||||||| ||||    
T  4215311 ttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatataaactat 4215374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 9656612 - 9656655
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||    
T  9656612 caaaaaataaaataaagttaaattattttcatataagctataag 9656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 25006135 - 25006096
Alignment:
Q  151 taaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttg 25006096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 36151637 - 36151578
Alignment:
Q  120 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||| |||||   || |||||||||||||||||||||||| ||||| |||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataa 36151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 45234160 - 45234191
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||||||||||||||||||||||||    
T  45234160 aaaagataaaataaagtcaaattattttcata 45234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 47877084 - 47877127
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||    
T  47877084 caaaagataaaataaaatcaaattgttttcatataaactataag 47877127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 50319231 - 50319286
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||||| ||||| | || ||||||||||||||||||||| || ||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 5422028 - 5421982
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  5422028 caaaagataaaatatagtcaaattgttttcttataagctataagttg 5421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 4202282 - 4202217
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||||| |||||||| ||||| ||| ||||||||||||| | || |||||||||||  ||||||||    
T  4202282 taagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 4304277 - 4304354
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    |||||||||||||||| || ||||||| |||||||  ||| || | |||| |||||||| |||||||| | |||||||    
T  4304277 ataagcgcttatcatataactgtttatatataagtcgtttctgcaacaaacgataaaattaagtcaaaatcttttcat 4304354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 5592792 - 5592747
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttg 5592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 6933090 - 6933037
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||  |||||| || ||||| |||||||||||||||||| ||||||||    
T  6933090 atgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 10854655 - 10854716
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||| ||||| ||||| ||||||||||| || |  | |||||||||||||||||||    
T  10854655 gcttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaa 10854716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 11211062 - 11211115
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||| |  | |||||||||||||||||| ||||| |||||||||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataa 11211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 30815789 - 30815708
Alignment:
Q  99 taagcgcttatcatacaagtg-tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||| || |  ||||||| |||| | ||| | || |||||||||||||||||| ||| |||||||||||||    
T  30815789 taagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataa 30815708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 175
Target Start/End: Original strand, 36602714 - 36602783
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    |||||||| ||||| ||||||||||| ||| | |  | ||| ||||||||||||||||||| ||||||||    
T  36602714 ttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaatcattttcat 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 183
Target Start/End: Original strand, 37818380 - 37818465
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataaccta 183  Q
    |||||| |||| || | ||||| ||||||||||||||||| | || ||| ||||||||  |||||||| ||||||| |||| ||||    
T  37818380 ataagcacttaccaaataagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtatatccta 37818465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 44940259 - 44940324
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 163  Q
    |||| ||||||||||| || ||  ||||||||  |||||||| || ||||||||||||||||||||    
T  44940259 ataatcgcttatcatataattgcgtatgtatagcttatttttatagcaaaagataaaataaagtca 44940324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 45205031 - 45205076
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttg 45205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 27140418 - 27140482
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||| |||||||||| | || |||||||||||||||  | ||||| |||| ||||||    
T  27140418 aagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataa 27140482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 38867959 - 38867907
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||| ||||| | ||||||||||| ||||||||||||| | ||||||||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 40358039 - 40357963
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 175  Q
    |||| |||||| ||| |||||  |||||||||| ||||| | || |||  ||||||||||||||||||| |||||||    
T  40358039 taagtgcttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 41516188 - 41516148
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctat 184  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  41516188 caaaagataaaagaaagtcaaactattttcatataagctat 41516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 41638463 - 41638399
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 163  Q
    ||||| ||||||||| ||||| |||||||||| |||||| |  | || |||||||||||||||||    
T  41638463 taagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 45107548 - 45107619
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| ||||| |||| |||||| ||||| | ||  |||| |||||||||||||||| |||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataa 45107619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 48282053 - 48282125
Alignment:
Q  102 gcgcttatcatacaagtgtttatgtataagttatttttgtacca-aaagataaaataaagtcaaattattttc 173  Q
    |||||||||||| ||||| ||||||| ||| ||||| | ||  | |||||||||||||||||||| |||||||    
T  48282053 gcgcttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttc 48282125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 52559957 - 52559901
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| |||| | | || ||||| |||||||||||||||||||||||| |||||    
T  52559957 atgtataaattatatctataacaaaatataaaataaagtcaaattattttcgtataa 52559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8680929 - 8680986
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8680929 gtttatgtataagttatttttgtaacaaaagatataataaagtcaaattattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 49060462 - 49060547
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||| |||| |||||||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  49060462 gcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagtt 49060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 30133967 - 30134046
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||  |||||||||||||||| |||||||  | ||||||||||||||||||||| || ||||| |||||    
T  30133967 ataagcgcttatcata--agtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataa 30134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 30496622 - 30496712
Alignment:
Q  100 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||| ||||| | ||||||||||||||||  ||||| | || ||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  30496622 aagcgcatatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttg 30496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 45813311 - 45813242
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||| |||||| ||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttg 45813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 178
Target Start/End: Original strand, 30751441 - 30751513
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||||| ||||| || || ||||  |||||||||| ||||| |||||||||||||||||||||||||||||    
T  30751441 ttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 1417201 - 1417272
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||  ||||| | || |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttg 1417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 44241781 - 44241867
Alignment:
Q  103 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| |||||| |||||||||||||||| | || ||| ||||||||||||||  || ||||||  ||||||||||||||||    
T  44241781 cgcttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttg 44241867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 23918891 - 23918961
Alignment:
Q  116 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||| |||||||| | | |  |||||||||||||||||||||||| ||||||||||| ||||||    
T  23918891 agtgtttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 179
Target Start/End: Complemental strand, 27121741 - 27121659
Alignment:
Q  97 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||| || |  ||||||||||| ||||| | ||  ||| ||||||||||||||||||| |||||||||||    
T  27121741 aataagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataa 27121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 35536026 - 35536104
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||| ||  | ||||||||||| ||||| | || || ||||||||||||||||||||| |||||||||||    
T  35536026 agcgcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 39505890 - 39505940
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  39505890 aagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaa 39505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 9527237 - 9527152
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||||| |||| |||| | ||| | | || ||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  9527237 cttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttg 9527152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 39591593 - 39591540
Alignment:
Q  126 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataa 39591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Complemental strand, 45593865 - 45593792
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| || || ||||||||||| ||||| |||| ||||| |||||||||||||||| | |||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataa 45593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 5010614 - 5010530
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||   ||||||  ||||||||| |||| ||||| |||||||||||| |||||||||| ||||||  |||||||||    
T  5010614 ttatcatacaagaagttatgtgcaagttatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttg 5010530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 7453549 - 7453462
Alignment:
Q  101 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatataacctataag 187  Q
    |||| |||||||| ||| ||| ||||||||| | ||| | || |||||||||||||||||||||| || ||||||||||| |||||||    
T  7453549 agcgtttatcataaaagggttcatgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataag 7453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 28165024 - 28165095
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||| ||||||||||||| ||| | || ||||||||||||| |||||||||| |||| |||||| ||||||    
T  28165024 aagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 31002723 - 31002766
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctataag 31002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 31341110 - 31341177
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    |||||||||||||||  || || ||||||||||| ||||| | || ||||||||||||||||||||||    
T  31341110 ataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 40689094 - 40689051
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  40689094 caaaagataaaataaagttaaattattttcatataagctataag 40689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 5939017 - 5939067
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||||||    
T  5939017 aagtgtttatgtataagttatttttataacaaaaaattaaataaagtcaaa 5939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    |||||||| ||||| ||||||||||| ||||| | || |||||||||||| ||||||||| | ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 991994 - 992067
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||| ||| ||||||||| ||| | || ||||| ||||||||||| |||| |||||||||||||    
T  991994 ttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataa 992067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 3501097 - 3501028
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| || || | ||  |||||||||||||||||||||| ||||||||||||  |||||||||    
T  3501097 ttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttg 3501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 5373136 - 5373233
Alignment:
Q  93 taaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||| |||| |||||||||  ||||| ||||||||| | ||||| | || ||||||||||||||||||| ||  ||||| ||||||  |||||||||    
T  5373136 taaaattaagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttg 5373233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 22759110 - 22759183
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||| |||||||| |||| ||||| | || |||||||||||||||||  ||||| |||||||||||    
T  22759110 ttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataa 22759183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 189
Target Start/End: Original strand, 25511549 - 25511634
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||||||||| |||||||  ||||||| |||||| | || |||||||| |||||||||||| || |||| ||||||  ||||||||    
T  25511549 gcttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagtt 25511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 47004011 - 47004092
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||| |||||||||| | |||| ||||| | || ||| |||||||||||||||||| |||||| |||| | |||||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataag 47004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 1431462 - 1431394
Alignment:
Q  98 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 166  Q
    ||||| |||||||||| |||||||||||||||||||||||   ||   ||| |||||||||||||||||    
T  1431462 ataagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaat 1431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 1432098 - 1432032
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaat---aaagtcaaattattttcatataacctat 184  Q
    ||||||||||||||||| | || |||||||||||||   ||||| ||||||||||||||||| ||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctat 1432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 2223071 - 2223143
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 177  Q
    |||||| || ||||||||||||||||| ||||| | || |||||||||||  ||||||||||| |||| ||||    
T  2223071 cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30456558 - 30456514
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagt 188  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  30456558 caaaagataaaataaagtcaaattgttttcatataagttataagt 30456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 41875864 - 41875908
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattt 171  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41875864 ataagttatttctgtactaaaagataaaataaggtcaaattattt 41875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 48157253 - 48157173
Alignment:
Q  119 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    |||||||||||| |||||| | ||  ||||||||||||||||| ||||| |||| |||||| |||||| ||| || |||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaa 48157173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 12835045 - 12835002
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  12835045 caaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 22296333 - 22296294
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  22296333 aagataaaataaagttaaattattttcctataacctataa 22296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 199
Target Start/End: Original strand, 24895330 - 24895373
Alignment:
Q  156 taaagtcaaattattttcatataacctataagttgcttacacaa 199  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  24895330 taaagtcaaattattttcatataagctataagttgttttcacaa 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 27481440 - 27481357
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 189  Q
    |||| ||| ||||||||||||||||| ||||| | || |||| |||||||  |||||||| | ||| ||||||| |||||||||    
T  27481440 ttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 5272959 - 5272893
Alignment:
Q  113 acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |||||| ||| |||||||||||    
T  5272959 acaactgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataa 5272893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 5276157 - 5276207
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||| ||||||||||| ||||||| || |||||||||| |||||||||||    
T  5276157 aagtgcttatgtataagctatttttataacaaaagataacataaagtcaaa 5276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 24909638 - 24909672
Alignment:
Q  156 taaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||||||||||||||||| ||||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttg 24909672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 24973870 - 24973940
Alignment:
Q  108 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||| ||||| ||||||| ||| ||||| | || |||||||||||||||| ||||||| ||| ||||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 31149586 - 31149640
Alignment:
Q  121 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31149586 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 31167878 - 31167932
Alignment:
Q  121 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31167878 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 35809041 - 35808991
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 165  Q
    ||||||||||||||||| ||||| | || |||||||||||||| |||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaa 35808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 36532289 - 36532343
Alignment:
Q  120 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 174  Q
    ||||||||||||||||   | || |||||||||||| ||||||||||||||||||    
T  36532289 tttatgtataagttatccctataacaaaagataaaacaaagtcaaattattttca 36532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 38496659 - 38496583
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 185  Q
    ||||||||||||| |||  ||||||||| |||| || ||||| |||||||||| ||||| | |||||||||||||||||    
T  38496659 tatcatacaagtgcttacatataagtta-ttttataacaaaacataaaataaa-tcaaactgttttcatataacctata 38496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 45777279 - 45777233
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  45777279 caaaagataaaattaagtcaaactgttttcatataaactataagttg 45777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 46825061 - 46825095
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||||||||||||||||||| |||||||||||    
T  46825061 aaaagataaaataaagtcaaattgttttcatataa 46825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 173
Target Start/End: Original strand, 3635927 - 3635956
Alignment:
Q  144 caaaagataaaataaagtcaaattattttc 173  Q
    ||||||||||||||||||||||||||||||    
T  3635927 caaaagataaaataaagtcaaattattttc 3635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 5006639 - 5006582
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||| ||||  | || |||||||||||||||||||||| | |||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataa 5006582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 7623078 - 7623135
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||| || |||||| |||||||||||| || | |||| ||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataa 7623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 8445210 - 8445275
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 171  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  8445210 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 8445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 187
Target Start/End: Original strand, 27548187 - 27548268
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    ||||| || ||||| |||| |||||| |||||   || ||||||||||||||||||| |||| ||||||| ||| |||||||    
T  27548187 ttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataag 27548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 27626258 - 27626197
Alignment:
Q  118 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||| ||||| | || |||||| ||||||||||||||| |||| | ||||||    
T  27626258 tgtttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  123 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 176  Q
    ||||||||| ||||| | || |||||||||||||||||||| ||| ||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 28613665 - 28613596
Alignment:
Q  121 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    ||||||||||| ||||||| || |||||||||||| ||||| ||||| ||||  |||||  |||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttg 28613596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 29574754 - 29574689
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 164  Q
    |||||| |||||||| || || ||||||||||| ||||||| |  |||||||| ||||||||||||    
T  29574754 taagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaa 29574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 39551695 - 39551614
Alignment:
Q  105 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||| |||| |||| ||||||| ||||| | || ||||||||| | |||||| ||| | ||||||||||| ||||||    
T  39551695 cttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 40428518 - 40428559
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  40428518 aaaaaataaaataaagttaaattattttcatataagctataa 40428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 1373670 - 1373614
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 178  Q
    |||||| ||||||||||| |  ||||||||||| |||||||||| | ||||||||||    
T  1373670 tatgtaaaagttatttttatgacaaaagataaattaaagtcaaacttttttcatata 1373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 5269463 - 5269519
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 171  Q
    ||||| |||| ||||| |||||| | ||  |||||||||||||||||||||||||||    
T  5269463 aagtgcttatatataaattatttctttaataaaagataaaataaagtcaaattattt 5269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 14823982 - 14823938
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  14823982 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 14823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 15270989 - 15270945
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 159  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15270989 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 15270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 20476651 - 20476595
Alignment:
Q  111 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 167  Q
    |||||||||| |||| ||||||||||| | |  |||||||||||||||| |||||||    
T  20476651 atacaagtgtgtatgcataagttatttctattgcaaaagataaaataaattcaaatt 20476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 25507284 - 25507320
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagat 151  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25507284 aagtgtttatgtataagttatttctataccaaaagat 25507320  T

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Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 25558326 - 25558290
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagat 151  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558326 aagtgtttatgtataagttatttctataccaaaagat 25558290  T

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Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 25558524 - 25558488
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagat 151  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558524 aagtgtttatgtataagttatttctataccaaaagat 25558488  T

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Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 33894556 - 33894619
Alignment:
Q  115 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| | |||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataa 33894619  T

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Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 38010659 - 38010719
Alignment:
Q  127 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  38010659 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 38010719  T

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Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 39908099 - 39908059
Alignment:
Q  147 aagataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  39908099 aagataaaataaagtcaaataattatcatataagctataag 39908059  T

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Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 1219 - 1147
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 1147  T

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Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 2756 - 2828
Alignment:
Q  107 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 2828  T

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Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 51508 - 51572
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||| | ||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatatcaactataa 51572  T

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Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 1876 - 1786
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  1876 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 1786  T

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Target: scaffold0549; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 190
Target Start/End: Complemental strand, 3966 - 3876
Alignment:
Q  99 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 190  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  3966 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 3876  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 69054 - 69016
Alignment:
Q  141 taccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  69054 taccaaaatataaaataaagtcaaattattttcatataa 69016  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 34104 - 34063
Alignment:
Q  145 aaaagataaaataaagtcaaattattttcatataacctataa 186  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  34104 aaaagataaaataaagtcaaattattttcatatgaactataa 34063  T

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Target: scaffold0508 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 9923 - 9848
Alignment:
Q  104 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||| | ||| ||||||||||||||||| | || ||||| ||||||| ||||||||   |||||||||||    
T  9923 gcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataa 9848  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 18475 - 18440
Alignment:
Q  144 caaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||||||||||| |||||||||||    
T  18475 caaaagataaaataaagtcaaattcttttcatataa 18440  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 173
Target Start/End: Complemental strand, 10158 - 10129
Alignment:
Q  144 caaaagataaaataaagtcaaattattttc 173  Q
    ||||||||||||||||||||||||||||||    
T  10158 caaaagataaaataaagtcaaattattttc 10129  T

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Target: scaffold0221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 20235 - 20292
Alignment:
Q  122 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 179  Q
    |||||||||||||||| | ||  |||| ||||||||| |||||||| |||||||||||    
T  20235 tatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 6600 - 6563
Alignment:
Q  150 ataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  6600 ataaaataaagtcaaactattttcatataagctataag 6563  T

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Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 13620 - 13583
Alignment:
Q  150 ataaaataaagtcaaattattttcatataacctataag 187  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  13620 ataaaataaagtcaaactattttcatataagctataag 13583  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 63431 - 63366
Alignment:
Q  106 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 171  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  63431 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 63366  T

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