View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14315_low_8 (Length: 537)

Name: NF14315_low_8
Description: NF14315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14315_low_8
NF14315_low_8
[»] chr6 (38 HSPs)
chr6 (216-534)||(11192358-11192676)
chr6 (20-215)||(11192133-11192328)
chr6 (216-513)||(13021028-13021326)
chr6 (317-498)||(12988002-12988182)
chr6 (220-469)||(24371312-24371560)
chr6 (216-371)||(14966418-14966569)
chr6 (216-271)||(12979909-12979964)
chr6 (216-382)||(34502530-34502691)
chr6 (339-464)||(9839294-9839419)
chr6 (216-365)||(3826599-3826744)
chr6 (331-372)||(13095610-13095651)
chr6 (216-292)||(20186015-20186091)
chr6 (216-292)||(22149900-22149976)
chr6 (216-367)||(14969902-14970049)
chr6 (219-287)||(23842568-23842635)
chr6 (419-494)||(2846373-2846448)
chr6 (216-287)||(5617986-5618055)
chr6 (216-287)||(23381948-23382016)
chr6 (400-464)||(2379329-2379393)
chr6 (216-287)||(10290262-10290333)
chr6 (216-287)||(17106394-17106465)
chr6 (400-464)||(22561124-22561188)
chr6 (216-296)||(23008327-23008407)
chr6 (216-296)||(23779957-23780037)
chr6 (219-287)||(23848059-23848126)
chr6 (220-274)||(11411061-11411113)
chr6 (272-310)||(12987650-12987688)
chr6 (216-287)||(9954240-9954308)
chr6 (216-287)||(23384528-23384596)
chr6 (216-287)||(30655735-30655803)
chr6 (400-464)||(3596742-3596806)
chr6 (400-464)||(4512575-4512639)
chr6 (216-287)||(6514272-6514345)
chr6 (400-464)||(13005288-13005352)
chr6 (400-464)||(18855986-18856050)
chr6 (400-464)||(23384713-23384777)
chr6 (400-464)||(26896220-26896284)
chr6 (216-287)||(28111578-28111651)
[»] chr4 (46 HSPs)
chr4 (216-513)||(37739536-37739831)
chr4 (216-362)||(48013164-48013311)
chr4 (216-464)||(33927069-33927318)
chr4 (96-186)||(47411512-47411602)
chr4 (216-465)||(15404856-15405107)
chr4 (216-465)||(56198949-56199201)
chr4 (216-383)||(15811910-15812077)
chr4 (216-372)||(18859965-18860117)
chr4 (216-382)||(10386121-10386283)
chr4 (216-383)||(44808733-44808896)
chr4 (400-492)||(48014027-48014119)
chr4 (216-464)||(34319695-34319942)
chr4 (216-372)||(17670499-17670651)
chr4 (421-498)||(53094571-53094648)
chr4 (216-464)||(56195624-56195874)
chr4 (216-287)||(3797589-3797661)
chr4 (216-382)||(10248002-10248165)
chr4 (331-382)||(19929070-19929121)
chr4 (324-464)||(22172255-22172397)
chr4 (216-289)||(26060776-26060850)
chr4 (216-287)||(12786398-12786469)
chr4 (393-464)||(3797762-3797833)
chr4 (216-287)||(11702355-11702424)
chr4 (216-287)||(15445130-15445201)
chr4 (48-94)||(47411673-47411719)
chr4 (216-287)||(18911782-18911850)
chr4 (216-287)||(3720636-3720707)
chr4 (216-287)||(19820990-19821061)
chr4 (400-464)||(24150769-24150833)
chr4 (400-464)||(39498406-39498470)
chr4 (401-467)||(8877462-8877528)
chr4 (402-464)||(52006494-52006556)
chr4 (403-464)||(18911595-18911656)
chr4 (419-464)||(33408297-33408342)
chr4 (216-287)||(40902851-40902919)
chr4 (400-464)||(18673043-18673107)
chr4 (216-287)||(19827697-19827768)
chr4 (339-491)||(33493577-33493728)
chr4 (400-464)||(34017742-34017806)
chr4 (216-287)||(35510267-35510338)
chr4 (216-287)||(37102983-37103054)
chr4 (400-464)||(39501745-39501809)
chr4 (400-464)||(40616769-40616833)
chr4 (216-287)||(40795288-40795359)
chr4 (216-287)||(52006296-52006367)
chr4 (400-464)||(52530896-52530960)
[»] chr5 (35 HSPs)
chr5 (216-513)||(21915172-21915470)
chr5 (236-506)||(31575473-31575744)
chr5 (216-465)||(7625199-7625451)
chr5 (216-368)||(3195283-3195431)
chr5 (216-382)||(19686357-19686520)
chr5 (216-382)||(2453470-2453632)
chr5 (216-365)||(30764430-30764575)
chr5 (216-382)||(19689740-19689903)
chr5 (218-365)||(30761611-30761754)
chr5 (216-372)||(26548278-26548430)
chr5 (216-372)||(26551837-26551989)
chr5 (216-372)||(28562141-28562293)
chr5 (216-372)||(28565709-28565861)
chr5 (216-365)||(34652536-34652681)
chr5 (216-287)||(7271304-7271375)
chr5 (419-467)||(18239475-18239523)
chr5 (216-287)||(28787095-28787166)
chr5 (402-464)||(34831861-34831923)
chr5 (338-372)||(40799815-40799849)
chr5 (220-383)||(10629396-10629555)
chr5 (216-287)||(21332450-21332521)
chr5 (400-464)||(31863812-31863876)
chr5 (406-464)||(4099484-4099542)
chr5 (216-287)||(32838155-32838224)
chr5 (223-296)||(33552398-33552471)
chr5 (216-287)||(22936718-22936786)
chr5 (216-287)||(41876532-41876600)
chr5 (216-287)||(4099301-4099372)
chr5 (400-464)||(12058453-12058517)
chr5 (400-464)||(12088055-12088119)
chr5 (400-464)||(18952790-18952854)
chr5 (400-464)||(21332641-21332705)
chr5 (400-464)||(26907416-26907480)
chr5 (400-464)||(34132944-34133008)
chr5 (400-464)||(34143175-34143239)
[»] chr1 (34 HSPs)
chr1 (216-506)||(7635704-7635994)
chr1 (232-506)||(16062003-16062280)
chr1 (231-506)||(16056591-16056868)
chr1 (401-513)||(16060929-16061041)
chr1 (232-349)||(16060465-16060581)
chr1 (420-513)||(13430938-13431031)
chr1 (216-382)||(29642996-29643160)
chr1 (411-513)||(27331748-27331850)
chr1 (331-466)||(34065048-34065188)
chr1 (216-464)||(27536309-27536556)
chr1 (400-506)||(27355648-27355753)
chr1 (401-513)||(16055528-16055640)
chr1 (231-352)||(11666784-11666906)
chr1 (216-306)||(27331551-27331640)
chr1 (324-464)||(3796708-3796851)
chr1 (272-363)||(13430155-13430246)
chr1 (324-400)||(27355186-27355262)
chr1 (216-287)||(2405797-2405868)
chr1 (324-372)||(30938444-30938492)
chr1 (400-464)||(42022739-42022803)
chr1 (400-464)||(49498458-49498522)
chr1 (403-466)||(21434438-21434501)
chr1 (419-494)||(34732340-34732415)
chr1 (404-464)||(1950420-1950480)
chr1 (404-464)||(23021888-23021948)
chr1 (400-464)||(28111155-28111219)
chr1 (338-382)||(50196844-50196888)
chr1 (216-287)||(1950224-1950292)
chr1 (216-287)||(2794505-2794573)
chr1 (216-287)||(28111334-28111402)
chr1 (220-276)||(49716667-49716721)
chr1 (220-276)||(49720149-49720203)
chr1 (419-467)||(11666981-11667028)
chr1 (324-352)||(27331641-27331669)
[»] chr3 (44 HSPs)
chr3 (216-506)||(22993461-22993750)
chr3 (220-460)||(18542740-18542981)
chr3 (219-464)||(47051678-47051926)
chr3 (231-372)||(2279410-2279548)
chr3 (216-372)||(2784306-2784458)
chr3 (403-464)||(19304640-19304701)
chr3 (401-513)||(17545991-17546102)
chr3 (236-383)||(47055192-47055338)
chr3 (219-368)||(30157810-30157956)
chr3 (219-287)||(3306133-3306200)
chr3 (216-372)||(10963594-10963750)
chr3 (331-372)||(10967103-10967144)
chr3 (403-464)||(19301456-19301517)
chr3 (219-287)||(31549555-31549622)
chr3 (216-296)||(42354179-42354257)
chr3 (336-382)||(54736095-54736142)
chr3 (216-372)||(10960087-10960243)
chr3 (400-465)||(6434726-6434791)
chr3 (216-287)||(16184447-16184515)
chr3 (216-372)||(25888248-25888400)
chr3 (216-382)||(4250575-4250737)
chr3 (404-464)||(10885039-10885099)
chr3 (216-287)||(10902311-10902382)
chr3 (216-382)||(18883401-18883564)
chr3 (393-464)||(8461428-8461499)
chr3 (437-494)||(3292943-3293000)
chr3 (216-287)||(7486933-7487001)
chr3 (216-287)||(10106364-10106432)
chr3 (216-287)||(24125861-24125929)
chr3 (400-465)||(28266098-28266163)
chr3 (216-287)||(35412867-35412935)
chr3 (331-364)||(44508934-44508967)
chr3 (403-464)||(55031947-55032008)
chr3 (403-464)||(55034807-55034868)
chr3 (400-464)||(2873746-2873810)
chr3 (216-296)||(6434538-6434618)
chr3 (400-464)||(6922702-6922766)
chr3 (400-464)||(7486753-7486817)
chr3 (216-287)||(16244244-16244315)
chr3 (400-464)||(23298563-23298627)
chr3 (400-464)||(32287271-32287335)
chr3 (400-464)||(37408863-37408927)
chr3 (216-287)||(52309384-52309455)
chr3 (400-464)||(53816010-53816074)
[»] scaffold0233 (1 HSPs)
scaffold0233 (216-513)||(9989-10286)
[»] chr2 (29 HSPs)
chr2 (324-513)||(34682731-34682920)
chr2 (216-464)||(45457241-45457492)
chr2 (216-383)||(45454037-45454204)
chr2 (216-464)||(31427316-31427567)
chr2 (236-464)||(36808239-36808468)
chr2 (216-368)||(13518493-13518641)
chr2 (216-365)||(11059992-11060137)
chr2 (331-382)||(4578017-4578069)
chr2 (400-464)||(8888715-8888779)
chr2 (216-287)||(43723968-43724039)
chr2 (216-287)||(1503201-1503270)
chr2 (216-287)||(1506405-1506474)
chr2 (216-287)||(3252590-3252657)
chr2 (331-368)||(11056531-11056568)
chr2 (216-287)||(29440753-29440821)
chr2 (216-287)||(25138703-25138774)
chr2 (220-287)||(15719057-15719122)
chr2 (433-464)||(17874582-17874613)
chr2 (361-464)||(5105806-5105911)
chr2 (216-287)||(8888894-8888962)
chr2 (216-287)||(24238630-24238698)
chr2 (216-287)||(45499137-45499205)
chr2 (400-464)||(9188614-9188678)
chr2 (400-464)||(12219875-12219939)
chr2 (400-464)||(16790719-16790783)
chr2 (216-287)||(25820619-25820690)
chr2 (216-287)||(26366182-26366253)
chr2 (400-464)||(37279638-37279702)
chr2 (216-248)||(42368478-42368510)
[»] chr7 (33 HSPs)
chr7 (216-506)||(5796596-5796884)
chr7 (216-330)||(18559990-18560104)
chr7 (216-464)||(11397830-11398079)
chr7 (216-372)||(11825135-11825287)
chr7 (216-301)||(18560828-18560913)
chr7 (219-465)||(16165832-16166077)
chr7 (216-382)||(26153340-26153503)
chr7 (216-372)||(5826488-5826640)
chr7 (393-512)||(18562490-18562609)
chr7 (216-368)||(8398021-8398169)
chr7 (216-287)||(22232406-22232475)
chr7 (216-287)||(22254264-22254333)
chr7 (216-287)||(23776170-23776240)
chr7 (220-382)||(8258074-8258233)
chr7 (216-287)||(26557772-26557843)
chr7 (400-467)||(5242116-5242183)
chr7 (361-464)||(48645558-48645663)
chr7 (216-287)||(10345449-10345520)
chr7 (400-464)||(10469228-10469292)
chr7 (216-287)||(35961373-35961444)
chr7 (400-464)||(45290446-45290510)
chr7 (419-494)||(7227583-7227657)
chr7 (216-287)||(13907579-13907650)
chr7 (216-287)||(44363607-44363676)
chr7 (216-287)||(4543070-4543138)
chr7 (393-494)||(13809476-13809576)
chr7 (231-296)||(22257519-22257583)
chr7 (400-464)||(10345279-10345343)
chr7 (400-464)||(26136094-26136158)
chr7 (400-464)||(26144474-26144538)
chr7 (400-464)||(37415389-37415453)
chr7 (400-464)||(45287035-45287099)
chr7 (216-287)||(48645740-48645811)
[»] chr8 (22 HSPs)
chr8 (216-464)||(14589397-14589646)
chr8 (216-382)||(33883124-33883289)
chr8 (216-382)||(30645661-30645824)
chr8 (327-464)||(36710522-36710661)
chr8 (216-382)||(31981536-31981699)
chr8 (216-369)||(14188361-14188510)
chr8 (220-372)||(20262742-20262890)
chr8 (220-372)||(21049372-21049520)
chr8 (216-382)||(31986463-31986626)
chr8 (231-372)||(5964443-5964581)
chr8 (402-464)||(8911743-8911805)
chr8 (216-363)||(45155042-45155189)
chr8 (220-287)||(5980072-5980138)
chr8 (219-464)||(16953871-16954114)
chr8 (404-464)||(18721246-18721306)
chr8 (216-287)||(23644094-23644163)
chr8 (419-493)||(30784985-30785059)
chr8 (216-287)||(10664225-10664293)
chr8 (216-287)||(5538545-5538616)
chr8 (400-464)||(10498175-10498239)
chr8 (216-287)||(14422016-14422087)
chr8 (400-464)||(23619325-23619389)
[»] scaffold0002 (2 HSPs)
scaffold0002 (220-464)||(118227-118470)
scaffold0002 (216-464)||(99009-99260)
[»] scaffold0045 (1 HSPs)
scaffold0045 (216-464)||(89867-90117)
[»] scaffold0690 (1 HSPs)
scaffold0690 (327-382)||(7596-7651)
[»] scaffold0014 (2 HSPs)
scaffold0014 (216-382)||(223895-224058)
scaffold0014 (216-382)||(228821-228984)
[»] scaffold0737 (1 HSPs)
scaffold0737 (216-287)||(7119-7189)
[»] scaffold0214 (3 HSPs)
scaffold0214 (216-382)||(13793-13956)
scaffold0214 (216-382)||(27809-27972)
scaffold0214 (216-382)||(20243-20406)
[»] scaffold1063 (1 HSPs)
scaffold1063 (216-287)||(2773-2844)
[»] scaffold0996 (1 HSPs)
scaffold0996 (216-287)||(1693-1766)
[»] scaffold0080 (1 HSPs)
scaffold0080 (216-287)||(27397-27468)
[»] scaffold0360 (1 HSPs)
scaffold0360 (220-287)||(6555-6620)
[»] scaffold0062 (1 HSPs)
scaffold0062 (220-287)||(67614-67679)
[»] scaffold0034 (1 HSPs)
scaffold0034 (216-287)||(48183-48253)
[»] scaffold0962 (1 HSPs)
scaffold0962 (216-287)||(3059-3127)
[»] scaffold0009 (1 HSPs)
scaffold0009 (416-465)||(241596-241645)
[»] scaffold1208 (1 HSPs)
scaffold1208 (416-464)||(282-330)
[»] scaffold0520 (1 HSPs)
scaffold0520 (216-287)||(1314-1385)
[»] scaffold0321 (1 HSPs)
scaffold0321 (400-464)||(2966-3030)


Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-141; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 216 - 534
Target Start/End: Original strand, 11192358 - 11192676
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11192358 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcattatgaaataagatg 11192457  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagact 415  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  || |    
T  11192458 agtaaagtttattttagtgcccgaggcaataggtatgtgtgcataaaaagtaaataacataaaataaagttgtttagaaaagatagagagagatatgatt 11192557  T
Q  416 agatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggccctacc 515  Q
    || |||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||| |    
T  11192558 aggtctttcgaatcctctgaggtcccctaattggtacaatgcacctatttctcatgaatatttctatagttttacgatgattaactaaaatagccctaac 11192657  T
Q  516 ccttgacttaagactctct 534  Q
    |||||||||||||||||||    
T  11192658 ccttgacttaagactctct 11192676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 11192133 - 11192328
Alignment:
Q  20 tatatgtcgcatcacatcacaataattctaaacagctttgtgttgtaacatttggagacaacagggtcatcaaggcatgggacgcagtcactggtgcaaa 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11192133 tatatgtcgcatcacatcacaataattctaaacagctttgtgttgtaacatttggagacaacagggtcatcaaggcatgggatgcagtcactggtgcaaa 11192232  T
Q  120 gcaatatacttttgagggtcatgaagcgcctatatattctgtatgccctcatcacaaagaaagtatttagttcatcttttggacaacaactaatgg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11192233 gcaatatacttttgagggtcatgaagcgcctatatattctgtatgccctcatcacaaagaaagtatttagttcatcttttggacaacaactgatgg 11192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 216 - 513
Target Start/End: Original strand, 13021028 - 13021326
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  13021028 ttagcaagtgtactaaaaaccatcgaagtaatgcaattaaatttgtttccacgaggaccgtgttaatctcaagtaaacaatagcgttatgaaataggatg 13021127  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgt-gcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagac 414  Q
      ||| |||||||||||||||||||| ||||||||||| | |||||| ||||||||| || ||||||| ||||||||||||| |||||||||||| |||     
T  13021128 tttaatgtttattttagtgcccgaggtagtaggtttgttttgcataacaagtaaatagcagaaaataaagttgtttataaaatatagagagagatgagag 13021227  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    ||| |||||  |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| ||||||    
T  13021228 taggtcttttgaatcctctaagttcccctaattggtacactgcacctatttctcatgaatatttctctagttttacgatgattaactaaaatagcccta 13021326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 317 - 498
Target Start/End: Original strand, 12988002 - 12988182
Alignment:
Q  317 gtaaagtttattttagtgcccgaggcagtaggtttgtgt-gcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagact 415  Q
    |||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||  | ||||||| ||||||||||||| |||||||||  |  ||||    
T  12988002 gtaatgtttattttagtggccgaggcagtaggtttgttttgcataaaaagtaaatagtagaaaataaagttgtttataaaatatagagagatgt--gact 12988099  T
Q  416 agatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgatta 498  Q
    || |||||  |||||||| ||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  12988100 aggtcttttgaatcctctaagttcccgtaattggtacactgcacctattcctcatgaatatttctctagttttacgatgatta 12988182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 220 - 469
Target Start/End: Complemental strand, 24371560 - 24371312
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    ||||||||||||||  ||||||||||||| || ||||||||| |||||||| || ||||||||||||| | | |||    ||||| |  ||||||| |||    
T  24371560 caagtgtactaaaat-tatcgaagtaataaaaataagttcgtatccacgaggactgtgttaatctcaatttagcaaaattgttattatctaagatgtgta 24371462  T
Q  320 aagtttattttagt-gcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataagg--ttgtttataaaagatagagagagattagacta 416  Q
    ||  |||||||  | |||| ||||||||| ||||  ||||||||| |||||||||| ||||||| |  ||||||  |||| |||  ||||||| ||||||    
T  24371461 aa--ttattttgtttgccctaggcagtagatttgattgcataaaa-gtaaataacagaaaataaagatttgtttggaaaatatatggagagatgagacta 24371365  T
Q  417 gatctttcaaatcctctgagttcccctaattggtacactgcacctatttctca 469  Q
    | | |||| ||||||||||||| ||||  | || |||||||||||||||||||    
T  24371364 ggtatttcgaatcctctgagtttccctgttcggcacactgcacctatttctca 24371312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 216 - 371
Target Start/End: Complemental strand, 14966569 - 14966418
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  14966569 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 14966472  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaata 371  Q
     ||||| ||||  | |||||| |||||||||| |||||||||||||||||||||||    
T  14966471 tgtaaatttta--taagtgcctgaggcagtagatttgtgtgcataaaaagtaaata 14966418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 12979909 - 12979964
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagt 271  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12979909 ttagcaagtgtactaaaaaccatcgaagtaatacaattaagtttgtttccacgagt 12979964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 34502691 - 34502530
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||||||||| || ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  34502691 ttagcaagtgtactaaaa-ctatcgaagtagtaaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 34502594  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||||| ||||||||||||||||||||| | ||||||||||||| |||||||    
T  34502593 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgca-ataaagtaaataacagaaaataa 34502530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 464
Target Start/End: Original strand, 9839294 - 9839419
Alignment:
Q  339 aggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggtt-gtttataaaagatagagagagattagactagatctttcaaatcctctgagt 437  Q
    ||||| ||| |||||||||||||||| ||||||| | ||||||| ||| ||||| |||| || ||||||||| |||  || |||||| |||| |||  ||    
T  9839294 aggcaatagatttgtgtgcataaaaattaaataaaagaaaataaagtttgtttagaaaatat-gagagagatgagatcaggtctttcgaatcatctatgt 9839392  T
Q  438 tcccctaattggtacactgcacctatt 464  Q
    |||||||||||||| ||||||||||||    
T  9839393 tcccctaattggtatactgcacctatt 9839419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 3826599 - 3826744
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||||||||||||  || |||||||| ||||| || || ||||||||||||| | | ||||   ||||  |  || ||||    
T  3826599 ttagcaagtgtactaaaa-ctatcgaagtaataagat-aagttcgtatccacaaggactgtgttaatctcaacttagcaataaagttaatatttaggatg 3826696  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaag 365  Q
     ||||| ||||  | |||||| ||||||||||||||||||||||||||||    
T  3826697 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgcataaaaag 3826744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 13095610 - 13095651
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  13095610 agtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 13095651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 20186091 - 20186015
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaa 292  Q
    |||||||||| ||||||||  ||||||||||||| ||| |||||||| |||||||| || ||||||||||||||||||    
T  20186091 ttagcaagtgcactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaagtaaa 20186015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 22149900 - 22149976
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaa 292  Q
    |||||||||| ||||||||  ||||||||||||| ||| |||||||| |||||||| || ||||||||||||||||||    
T  22149900 ttagcaagtgcactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaagtaaa 22149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 14970049 - 14969902
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| || ||||||||| |||| ||| ||  |||||||||||| | | ||||   ||||  |  || ||||    
T  14970049 ttagcaagtgtactaaaa-ctatcgaagtaata-aaataagttcgtatccatgaggactatgttaatctcaacttagcaataaagttaatatctaggatg 14969952  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagta 367  Q
     ||||| ||||  | |||||| |||||||||| |||||||||||||||||||    
T  14969951 tgtaaatttta--taagtgcctgaggcagtagatttgtgtgcataaaaagta 14969902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 23842568 - 23842635
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||| ||||||||||||| ||||| ||| |||||||| |||||||| || |||||||||||||    
T  23842568 gcaagtgtaccaaaaactatcgaaataataaaat-aagttcgtatccacgaggactgtgttaatctcaa 23842635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 494
Target Start/End: Complemental strand, 2846448 - 2846373
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatg 494  Q
    |||||| |||||||| ||| ||||||||||||| ||||||||||||||| | ||||  |||| |||||| ||||||    
T  2846448 tctttcgaatcctctaagtccccctaattggtatactgcacctatttcttacgaatgattctctagtttcacgatg 2846373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 5617986 - 5618055
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| || |||||||| || |||||||||||||    
T  5617986 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagtttgtatccacgaggactgtgttaatctcaa 5618055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 23381948 - 23382016
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| ||||||||||||||| || ||   ||||| ||||||| || |||||||||||||    
T  23381948 ttagcaagtgtactaaatactatcgaagtaataaaaata---tcgttcccacgaggactgtgttaatctcaa 23382016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 2379393 - 2379329
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || ||||||||||| |||  |||||||||||||||| ||||||||||||    
T  2379393 agagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatactgcacctatt 2379329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 10290333 - 10290262
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| ||||| || |||||||| || |||||||||||||    
T  10290333 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagtttgtatccacgaggactgtgttaatctcaa 10290262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 17106394 - 17106465
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||  || |||||||||||||    
T  17106394 ttagcaagtgtactaaaaatgtatcgaagtaata-aaataagttcgtatccacgaagacagtgttaatctcaa 17106465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 22561124 - 22561188
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || ||||||||||| |||  |||||||||||||||| ||||||||||||    
T  22561124 agagagagatgagatcaggtctttcaaatcatctacgttcccctaattggtatactgcacctatt 22561188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Complemental strand, 23008407 - 23008327
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||| |||| ||| || ||||||||||||| ||| ||||    
T  23008407 ttagcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaat 23008327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 23779957 - 23780037
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    ||||||||||||||||| |||||||||||| || |  |||| |||| |||| ||| || ||||||||||||| ||| ||||    
T  23779957 ttagcaagtgtactaaatactatcgaagtagtaaatctaagatcgtatccatgaggactgtgttaatctcaattaagcaat 23780037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 23848126 - 23848059
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||| ||||||||||||  ||||| ||| |||||||| |||||||| || |||||||||||||    
T  23848126 gcaagtgtaccaaaaactatcgacataataaaat-aagttcgtatccacgaggactgtgttaatctcaa 23848059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 11411113 - 11411061
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtacc 274  Q
    ||||||||| ||||||||||||||||||  ||| |||||||| ||||||||||||    
T  11411113 caagtgtaccaaaaactatcgaagtaat--aataaagttcgtatccacgagtacc 11411061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 310
Target Start/End: Original strand, 12987650 - 12987688
Alignment:
Q  272 accgtgttaatctcaagtaaacaattgcgttatgaaata 310  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  12987650 accgtgttaatctcaagtaaacagtagcgttatgaaata 12987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 9954308 - 9954240
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  9954308 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 9954240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 23384528 - 23384596
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| ||||||||||||||| || ||   ||||| ||||||| || |||||||| ||||    
T  23384528 ttagcaagtgtactaaatactatcgaagtaataaaaata---tcgttcccacgaggactgtgttaatttcaa 23384596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 30655803 - 30655735
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| ||||||||||||||| || ||   ||||| |||| || || |||||||||||||    
T  30655803 ttagcaagtgtactaaatactatcgaagtaataaaaata---tcgttcccacaaggactgtgttaatctcaa 30655735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 3596742 - 3596806
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| |||| | |  |||||||||||||||| ||||||||||||    
T  3596742 agagagagatgagattaggtctttcgaatcatttatgttcccctaattggtatactgcacctatt 3596806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 4512639 - 4512575
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  4512639 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 4512575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 6514345 - 6514272
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaat---taagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| |||   ||||||||| || || || || |||||||||||||    
T  6514345 ttagcaagtgtactaaaa-ctatcgaagtaataaaatttataagttcgtatctacaaggactgtgttaatctcaa 6514272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 13005352 - 13005288
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || ||||||||||| |||  |||||||||||||||| ||| ||||||||    
T  13005352 agagagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatacttcacctatt 13005288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 18855986 - 18856050
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  18855986 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 18856050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 23384713 - 23384777
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| | || |||  |||||||||||||||| ||||||||||||    
T  23384713 agagagagatgagattaggtctttcgattcatctatgttcccctaattggtatactgcacctatt 23384777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 26896220 - 26896284
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  26896220 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 26896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 28111578 - 28111651
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaat---taagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| |||   ||||||||| |||||  | || |||||||||||||    
T  28111578 ttagcaagtgtactaaaa-ctatcgaagtaataaaatttataagttcgtatccacatggactgtgttaatctcaa 28111651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 216 - 513
Target Start/End: Original strand, 37739536 - 37739831
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||| ||||    
T  37739536 ttagcaagtgtattaaaaactatcgaagtaatacaattaagttcgtttccacgaggaccgtgttaatctcaagtaaacaatagcgatatgaaataggatg 37739635  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtt-tgtgtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagac 414  Q
     |||||||||||||||||||| ||||||||||||| | || ||||||||||||| || || ||||||| |||||||| ||||||||||| |||   ||||    
T  37739636 tgtaaagtttattttagtgcctgaggcagtaggttctttgcgcataaaaagtaagtagcagaaaataaagttgtttagaaaagatagagggag---agac 37739732  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    ||| |||||| |||| || ||||||| |||||||||||||||||||||| ||| | |||||||||| |||||| |||||| ||||||||||| ||||||    
T  37739733 taggtctttcgaatcatcagagttcctctaattggtacactgcacctatgtcttatgaatatttctctagtttcacgatggttagctaaaatagcccta 37739831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 216 - 362
Target Start/End: Original strand, 48013164 - 48013311
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||    
T  48013164 ttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccacgaggaccgtgttaatttcaagtaaacaattgtgttatgaaatatgatg 48013263  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttg-tgtgcataaa 362  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||    
T  48013264 cgtaaagtttattttagtgcccgaggcagtaggtttgttgtgcataaa 48013311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 464
Target Start/End: Complemental strand, 33927318 - 33927069
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || ||||    
T  33927318 ttagcaagtgtactaaaa-ctatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggatg 33927220  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattag 412  Q
     ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||  |||||| |  ||||||||| ||    
T  33927219 tgtaaa-tttcttttagtgcccgaggcagtaggttggtgtgcataaaaagtaaataacataaaataagatagttttggaaaagacaaggagagagatgag 33927121  T
Q  413 actagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |  || |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  33927120 atcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 33927069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 47411602 - 47411512
Alignment:
Q  96 atgggacgcagtcactggtgcaaagcaatatacttttgagggtcatgaagcgcctatatattctgtatgccctcatcacaaagaaagtatt 186  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  47411602 atgggatgcagtcactggtgcaaagcaatatacttttgagggtcatgaagcgcctgtatattctgtatgccctcatcacaaagaaaatatt 47411512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 216 - 465
Target Start/End: Original strand, 15404856 - 15405107
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    ||||||||||||||||| |   |||||||||||| |||||||||||| |||||||  || ||||||||||||| | | ||||  |||||  |  || |||    
T  15404856 ttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgacgactgtgttaatctcaatttagcaataacgttaatatctaggat 15404955  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  15404956 gtgtaaa-tttgttttagtgcacgaggcagtaggttggtgtgcataaaaagtaaataaca-aaaataagatagttttggaaaagacaaggagagagatga 15405053  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    ||  || |||||| |||| ||| |||||||||||||| || |||||||||||||    
T  15405054 gatcaggtctttcgaatcatctaagttcccctaattgatatactgcacctattt 15405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 216 - 465
Target Start/End: Complemental strand, 56199201 - 56198949
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  56199201 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 56199102  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||| | | |||  |||||| |  ||||||||| |    
T  56199101 gtgtaaa-tttcttttagtgcccgagacagtaggttggtgtgcataaaaagtaaataatagaaaataagatagttttggaaaagacaaggagagagatga 56199003  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
     |  || |||||| |||| ||   |||||||||||||||| |||||||||||||    
T  56199002 aatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattt 56198949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 216 - 383
Target Start/End: Original strand, 15811910 - 15812077
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || ||     
T  15811910 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggaa 15812009  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataag 383  Q
    | ||||| ||| |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  15812010 gtgtaaa-tttgttttagtgcctgaggcagtaggttagtgtgcataaaaagttaataacaaaaaataag 15812077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 18860117 - 18859965
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  18860117 ttagcaagtgtactaaaaa-tatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 18860020  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  18860019 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 18859965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 10386283 - 10386121
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  10386283 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggatg 10386186  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||  | ||||||||||||||||||||||||||||||||||||| |||||||    
T  10386185 tgtaaattttata--agtttctgaggcagtaggtttgtgtgcataaaaagtaaataacagaaaataa 10386121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 383
Target Start/End: Original strand, 44808733 - 44808896
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  44808733 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatg 44808829  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataag 383  Q
     ||||| ||| ||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  44808830 tgtaaa-tttcttttagtgcccgaggcagtagttttgattgcataaaaagtaaataacagaaaataag 44808896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 400 - 492
Target Start/End: Original strand, 48014027 - 48014119
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacga 492  Q
    |||||||||| ||||| | |||||| ||||||||||||||||||||||||||| | ||| |||| ||| | |||||||||| |||||||||||    
T  48014027 agagagagatgagacttggtctttcgaatcctctgagttcccctaattggtactccgcatctatgtcttatgaatatttctctagttttacga 48014119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 34319695 - 34319942
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  34319695 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatg 34319791  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattag 412  Q
     ||||| ||| |||||||||||||| |||||| ||||  |||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| ||    
T  34319792 tgtaaa-tttcttttagtgcccgagacagtagttttgattgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatgag 34319890  T
Q  413 actagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |  || |||||| |||| ||   |||||| ||||||||| ||||||||||||    
T  34319891 atcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctatt 34319942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 17670651 - 17670499
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| ||  |||||||||||| | | ||||   ||||  |  || ||||    
T  17670651 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactatgttaatctcaacttagcaataaagttaatatctaggatg 17670554  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||| |   |||||| |||||||||||||||||||||||||||||||||||    
T  17670553 tgtaaattttgta--agtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 17670499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 421 - 498
Target Start/End: Complemental strand, 53094648 - 53094571
Alignment:
Q  421 tttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgatta 498  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||  |||| |||||| ||||||||||    
T  53094648 tttcaaatcctctaagttcccctaattggtatactgcacctatttcttacgaatgattctctagtttcacgatgatta 53094571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 464
Target Start/End: Complemental strand, 56195874 - 56195624
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| | |||||| |  ||||||||||||| | | ||||  |||||  |  || |||    
T  56195874 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtattcacgaggattgtgttaatctcaatttagcaataacgttaatatctaggat 56195775  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| ||||||||||||||||||||| ||||  ||||| |||  ||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  56195774 gtgtaaa-tttcttttagtgcccgaggcagtagttttgattgcat-aaatttaaataacagaaaataagatagttttggaaaagacaaggagagagatga 56195677  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||  || |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  56195676 gatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 56195624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 3797589 - 3797661
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||| || |||||||||||||    
T  3797589 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaa 3797661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 10248165 - 10248002
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || |||||||||||||   | ||||   ||||  |  || ||||    
T  10248165 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaaactagcaataaagttaatatctaggatg 10248068  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | ||||   ||||||||| |||||||||| |||||||||||||||||||||||||    
T  10248067 tgtaaatttta--taagtgtatgaggcagtacgtttgtgtgcaataaaaagtaaataacataaaataa 10248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 19929121 - 19929070
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  19929121 agtgcctgaggcagtaggtttgtgtgcataaaaattaaataacagaaaataa 19929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 464
Target Start/End: Original strand, 22172255 - 22172397
Alignment:
Q  324 ttattttagtgcccgaggcagtaggttt-gtgtgcataaaaagtaaata-acataaaataagg-ttgtttataaaagatagagagagattagactagatc 420  Q
    ||||||||||||||||||||||| |||| |||||||||||  ||||||| ||  ||||||| | || |||  |||||||| |||||||| ||||||| ||    
T  22172255 ttattttagtgcccgaggcagtatgttttgtgtgcataaat-gtaaatagacggaaaataaagattttttggaaaagatatagagagatgagactaggtc 22172353  T
Q  421 tttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||  |||||||||||||  |||| |||| |||||| |||||||    
T  22172354 ttttgaatcctctgagttttcctatttggcacactgtacctatt 22172397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 289
Target Start/End: Complemental strand, 26060850 - 26060776
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagt 289  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||| ||  ||||||||||||||    
T  26060850 ttagcaagtgtactaaaaatgtatcgaagtaataaaaataagttcgtatccacgaggactatgttaatctcaagt 26060776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 12786469 - 12786398
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  12786469 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 12786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 3797762 - 3797833
Alignment:
Q  393 aaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||||||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  3797762 aaaagatagagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 3797833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 11702355 - 11702424
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||  || |||||||||||||    
T  11702355 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaagactgtgttaatctcaa 11702424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 15445130 - 15445201
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||||||||| |||||||| || |  ||||||||||    
T  15445130 ttagcaagtgtactaaatactatcgaagtagtaaaaataagttcgtatccacgaggactgatttaatctcaa 15445201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 47411719 - 47411673
Alignment:
Q  48 taaacagctttgtgttgtaacatttggagacaacagggtcatcaagg 94  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||    
T  47411719 taaacagctttgtgttgtaacatgtggagaggacagggtcatcaagg 47411673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 18911850 - 18911782
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||||||||||| || |||||||||||||    
T  18911850 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgtttccacgaggactgtgttaatctcaa 18911782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 3720707 - 3720636
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||| |||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  3720707 ttagcaaatgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 3720636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 19821061 - 19820990
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| |  |||||||||||||    
T  19821061 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggattgtgttaatctcaa 19820990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 24150833 - 24150769
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||| |||||||||||||||| ||||||||||||    
T  24150833 agagagagatgagatcaggtctttcgaatcatctgtgttcccctaattggtatactgcacctatt 24150769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 39498470 - 39498406
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| ||| ||||||||||||||||| ||||||||||||    
T  39498470 agagagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacctatt 39498406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 467
Target Start/End: Original strand, 8877462 - 8877528
Alignment:
Q  401 gagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttct 467  Q
    ||||||||| |||  || ||||||||||| ||| |||||||||| || ||| |||||||||||||||    
T  8877462 gagagagatgagatcaggtctttcaaatcatctaagttcccctatttagtatactgcacctatttct 8877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 464
Target Start/End: Original strand, 52006494 - 52006556
Alignment:
Q  402 agagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||| |||| || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  52006494 agagagatgagaccaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 52006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 18911656 - 18911595
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||| ||||||| |||||  |||| |||  |||||||||||||||| ||||||||||||    
T  18911656 gagagatgagactaggtcttttgaatcatctatgttcccctaattggtatactgcacctatt 18911595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 33408297 - 33408342
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||| |||||||| |||||||||||| |||| ||||||||||||    
T  33408297 tctttcgaatcctctaagttcccctaatcggtatactgcacctatt 33408342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 40902851 - 40902919
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  40902851 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 40902919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 18673043 - 18673107
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  18673043 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 18673107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 19827768 - 19827697
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  | ||||||||||| ||| |||||||| |||||||| |  |||||||||||||    
T  19827768 ttagcaagtgtactaaaaatgtctcgaagtaataaaat-aagttcgtatccacgaggattgtgttaatctcaa 19827697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 491
Target Start/End: Original strand, 33493577 - 33493728
Alignment:
Q  339 aggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagactagatctttcaaatcctctgagtt 438  Q
    ||||||| ||||||  |||||||||||||||||| ||| |  || |||||||  |||| |||  ||||||| |||  || || ||| |||||||||| ||    
T  33493577 aggcagttggtttgattgcataaaaagtaaataa-atagataaaagttgttttgaaaatataaggagagatgagatcaggtcattcgaatcctctgattt 33493675  T
Q  439 cccctaattggtacactgcacctatttctcaagaatatttctatagttttacg 491  Q
       ||| ||||||||||||||||||| || | ||||| |||  ||||||||||    
T  33493676 attctatttggtacactgcacctattccttatgaatacttccctagttttacg 33493728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 34017742 - 34017806
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  34017742 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 34017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 35510338 - 35510267
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  |||| |||||||| ||| || ||||| |||||||| || |||||||||||||    
T  35510338 ttagcaagtgtactaaaaatgtatccaagtaataaaataaa-ttcgtatccacgaggactgtgttaatctcaa 35510267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 37102983 - 37103054
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   ||| |||||||| ||| |||||||| |||||||| || |||||||||||||    
T  37102983 ttagcaagtgtactaaaaatgcatcaaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 37103054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 39501809 - 39501745
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  39501809 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 39501745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 40616769 - 40616833
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  40616769 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 40616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 40795359 - 40795288
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| |||| |||| || |||||||  || |||||||||||||    
T  40795359 ttagcaagtgtactaaaaatgtatcgaagtaataaaatt-agtttgtatccacgaagactgtgttaatctcaa 40795288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 52006296 - 52006367
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| || |||||| || |||||||| || |||||||||||||    
T  52006296 ttagcaagtgtactaaaaatgaatcgaagtaata-aaataagtttgtatccacgaggactgtgttaatctcaa 52006367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 52530896 - 52530960
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  52530896 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 52530960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 3e-89; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 216 - 513
Target Start/End: Complemental strand, 21915470 - 21915172
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||| || ||| |||||||||||||||||||| ||||  |||||||||||| ||||    
T  21915470 ttagcaagtgtactaaaaactattgaagtaaaacaattaagttcgttttcatgaggaccgtgttaatctcaagtaagcaataacgttatgaaataggatg 21915371  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagac 414  Q
     ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| | |||||||| ||| ||  |||||||||||||||||  |||    
T  21915370 tgtaaagtttatttcagtgcccgaggcagtaggtttgttgtgcataaaaagtaaataatagaaaataagattgattggaaaagatagagagagatgtgac 21915271  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    ||| |||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||||||| || ||| |||||| ||| ||||||| ||||||    
T  21915270 taggtctttcgaatcctttgagttcccctaattggtacactacacctatttcttatgaatatttctctaatttcacgatggttaactaaaatagcccta 21915172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 236 - 506
Target Start/End: Complemental strand, 31575744 - 31575473
Alignment:
Q  236 tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttattttagtgc 335  Q
    ||||||||||||| || ||||||||||||||| || ||||| |||||||||| | ||||||  |||||| |  || |||  ||||| ||| |||||||||    
T  31575744 tatcgaagtaataaaaataagttcgtttccacaaggaccgtattaatctcaattgaacaataacgttattatctaggatatgtaaatttt-ttttagtgc 31575646  T
Q  336 ccgaggcagtaggtttgtgtgcataaaaagtaaataa-cataaaataaggtt-gtttataaaagatagagagagattagactagatctttcaaatcctct 433  Q
    ||||||||||| ||||||||||   ||||| |||||| || ||||||| ||| ||||  ||||||||  ||||||| ||||||| |||||| |||||| |    
T  31575645 ccgaggcagtaagtttgtgtgccagaaaagaaaataaacaaaaaataaagtttgtttggaaaagatatggagagatgagactaggtctttcgaatcctat 31575546  T
Q  434 gagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    || |||||||| ||||||||||||| |||||||  | |||||||||| |||||| |||||| ||| |||||||    
T  31575545 gacttcccctatttggtacactgcagctatttcatatgaatatttctctagtttcacgatggttaactaaaat 31575473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 465
Target Start/End: Complemental strand, 7625451 - 7625199
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   ||||||||| || ||| |||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  7625451 ttagcaagtgtactaaaaatgcatcgaagtagtaaaataaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 7625352  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| ||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  7625351 gtgtaaa-tttcttttagtgcccgaggcagtagttttgattgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatga 7625253  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    ||  || ||||||||||| ||   |||||||||||||||| ||| |||||||||    
T  7625252 gatcaggtctttcaaatcatcgatgttcccctaattggtatactacacctattt 7625199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 3195431 - 3195283
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  3195431 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 3195334  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaa 368  Q
     ||||| ||||  | |||||| |||||||||||||||||||||||||||||||    
T  3195333 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgcataaaaagtaa 3195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 19686520 - 19686357
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||||||||| || ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  19686520 ttagcaagtgtactaaaa-ctatcgaagtagtaaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 19686423  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  19686422 tgtaaattttata--agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 19686357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 2453632 - 2453470
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| || |||||||| || ||||||||||||| | | ||||   ||||  |  || |||     
T  2453632 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatttaggata 2453535  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  2453534 tgtaaattttata--agtgcctgaggcagtaggtttatgtgcataaaaagtaaataacagaaaataa 2453470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 30764575 - 30764430
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  30764575 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 30764478  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaag 365  Q
     ||||| ||||  | |||||| ||||||||||||||||||||||||||||    
T  30764477 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgcataaaaag 30764430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 19689903 - 19689740
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||||||||| || ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  19689903 ttagcaagtgtactaaaa-ctatcgaagtagtaaaat-aagttcgtatccacgagcactgtgttaatctcaacttagcaataaagttaatatctaggatg 19689806  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||| | |||||   |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  19689805 tgtagattttata--agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 19689740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 365
Target Start/End: Complemental strand, 30761754 - 30761611
Alignment:
Q  218 agcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgag 317  Q
    |||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | ||||||   ||||  |  || |||| |    
T  30761754 agcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttaacaataaagttaatatctaggatgtg 30761657  T
Q  318 taaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaag 365  Q
    |||| ||||  | |||| | ||||||||||||||||||||||||||||    
T  30761656 taaatttta--taagtgtctgaggcagtaggtttgtgtgcataaaaag 30761611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 26548430 - 26548278
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| || ||||||||| |||||||| || |||||||||| || | | ||||   ||||  |  || ||||    
T  26548430 ttagcaagtgtactaaaa-ctatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagtatctaggatg 26548333  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||| ||||    
T  26548332 tgtaaacttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtatataa 26548278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 26551989 - 26551837
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| || ||||||||| |||||||| || |||||||||| || | | ||||   ||||  |  || ||||    
T  26551989 ttagcaagtgtactaaaa-ctatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatcttaacttagcaataaagttagtatctaggatg 26551892  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||| ||||    
T  26551891 tgtaaacttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtatataa 26551837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 28562141 - 28562293
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| | |||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  28562141 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatg 28562238  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||| ||||    
T  28562239 tgtaaacttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtatataa 28562293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 28565709 - 28565861
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| | |||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  28565709 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aggttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatg 28565806  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||| ||||    
T  28565807 tgtaaacttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtatataa 28565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 34652536 - 34652681
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| ||||| || |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  34652536 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagtttgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 34652633  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaag 365  Q
     ||||| ||||  | |||||| ||| ||||||||||||||||||||||||    
T  34652634 tgtaaatttta--taagtgcctgagacagtaggtttgtgtgcataaaaag 34652681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 7271375 - 7271304
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  7271375 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 7271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 467
Target Start/End: Original strand, 18239475 - 18239523
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttct 467  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||    
T  18239475 tctttcgaatcctctgagttcccctaattggtgtactgcacctatttct 18239523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 28787095 - 28787166
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||| ||||||||| ||||||    
T  28787095 ttagcaagtgtactaaaaatgtatcgaagtaata-aaataagttcgtatccacgaggaccgtgttagtctcaa 28787166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 34831923 - 34831861
Alignment:
Q  402 agagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||| ||| ||| |||||| |||| ||||||||||||||||||||| | ||||||||||    
T  34831923 agagagatgagattaggtctttcgaatcttctgagttcccctaattggtataatgcacctatt 34831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 40799815 - 40799849
Alignment:
Q  338 gaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||||||||||||||||||||||||||||||||    
T  40799815 gaggcagtaggtttgtgtgcataaaaagtaaataa 40799849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 383
Target Start/End: Complemental strand, 10629555 - 10629396
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    ||||||||| ||| ||||||||||||||| || |||||| || |||| ||| || ||||||||||||| | ||||||    |||| |  || |||| |||    
T  10629555 caagtgtaccaaatactatcgaagtaata-aaataagtttgtatccatgaggactgtgttaatctcaatttaacaataaaattattatttaggatgtgta 10629457  T
Q  320 aagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataag 383  Q
    ||  |||||||| ||||  ||||||||| ||||  ||||| |||| ||||||||||||||||||    
T  10629456 aa--ttattttaatgcctaaggcagtagatttgattgcat-aaaattaaataacataaaataag 10629396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 21332450 - 21332521
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||| || |||||||| ||||    
T  21332450 ttagcaagtgtactaaaaatgtatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatttcaa 21332521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 31863876 - 31863812
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||||||| |||||| |||| |||  ||||||||||||| || ||||||||||||    
T  31863876 agagagagatgagactaggtctttcgaatcatctatgttcccctaattgatatactgcacctatt 31863812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 4099484 - 4099542
Alignment:
Q  406 agattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||| ||||||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  4099484 agatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 4099542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 32838224 - 32838155
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||   ||||||||||||| || |||||||||||||    
T  32838224 ttagcaagtgtactaaaaatgtatcgaagtaataaaaata---tcgtttccacgaggactgtgttaatctcaa 32838155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 33552471 - 33552398
Alignment:
Q  223 gtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    ||||||||||||  ||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | ||||||    
T  33552471 gtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaatttaacaat 33552398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 22936718 - 22936786
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  22936718 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 22936786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 41876532 - 41876600
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  41876532 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 41876600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 4099301 - 4099372
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| || ||||||||| |||||||| || |||||||| ||||    
T  4099301 ttagcaagtgtactaaaaatgcatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatatcaa 4099372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 12058453 - 12058517
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  12058453 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 12058517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 12088119 - 12088055
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  12088119 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 12088055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 18952854 - 18952790
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  | |||||||||||| |||  |||||||||||||||| ||||||| ||||    
T  18952854 agagagagatgagatcaaatctttcaaatcatctatgttcccctaattggtatactgcacatatt 18952790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 21332641 - 21332705
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  21332641 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 21332705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 26907416 - 26907480
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  26907416 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 26907480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 34132944 - 34133008
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  34132944 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 34133008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 34143175 - 34143239
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  34143175 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 34143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 7e-78; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 216 - 506
Target Start/End: Complemental strand, 7635994 - 7635704
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||||||||| |||||||| ||| ||||| ||||| || || |||||||||||||||| |||||||| | ||||||||||| ||||    
T  7635994 ttagcaagtgtactaaaaactatcaaagtaatataataaagtttgtttctacaaggaccgtgttaatctcaattaaacaatagtgttatgaaataggatg 7635895  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgt-gtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagac 414  Q
     ||||| ||||||||||| |||||||  |||||||||| |||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||    
T  7635894 tgtaaa-tttattttagtacccgaggtggtaggtttgttgtgcataaaaagtaaatatcagaaaataaagttgtttagaaaagatagagagagattagac 7635796  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    ||| |||||| ||| |||| | ||||| |||||||||||||||||||| |||  | |||||||||| |||||| |||||||||| |||||||    
T  7635795 taggtctttcgaattctctaaattcccataattggtacactgcacctacttcctatgaatatttctctagtttcacgatgattaactaaaat 7635704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 232 - 506
Target Start/End: Original strand, 16062003 - 16062280
Alignment:
Q  232 aaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttatttta 331  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||| |||||| ||||||||    
T  16062003 aaactattgaagtaatacaattaagttcgtttccatgagaaccgtgttaatctcaagtaaacaatagcattatgaaataagatgtgtaaag-ttatttta 16062101  T
Q  332 gtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaat-aaggttgtttataaaag--atagagagagattagactagatctttcaaa 427  Q
    ||| ||||| ||||||||||| |||||||||||| ||||||| | ||||| ||| ||||||  |||||  || || |||||| ||||||| |||||| ||    
T  16062102 gtgtccgagacagtaggtttgttgtgcataaaaattaaataatagaaaataaagattgtttgaaaaagttatggaaagagatgagactaggtctttcgaa 16062201  T
Q  428 tcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    || | ||| || || ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  16062202 tcatttgattttccataattggtacactacacctatttctcatgaatatttctctagttttacgatgattaactaaaat 16062280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 231 - 506
Target Start/End: Original strand, 16056591 - 16056868
Alignment:
Q  231 aaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttatttt 330  Q
    |||||||| ||| ||||||||||||  | ||||||| ||| ||  | |||||||||||||||| || || |||||||||| |||| ||||||||   |||    
T  16056591 aaaactattgaactaatacaattaatgttgtttccatgagaacaatattaatctcaagtaaacgatagcattatgaaataggatgtgtaaagtta--ttt 16056688  T
Q  331 agtgcccgaggcagtaggtttgt-gtgcataaaaagtaaataacataaaataagg-ttgtttataaaagata--gagagagattagactagatctttcaa 426  Q
    |||||| ||| |||||| ||||| ||||||||||| ||||||||| ||||||| | ||||||  ||||| ||  ||||||||| ||||||| |||||| |    
T  16056689 agtgcctgagacagtagatttgttgtgcataaaaattaaataacagaaaataaagattgtttggaaaagttatggagagagatgagactaggtctttcga 16056788  T
Q  427 atcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    || || ||| |||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  16056789 atactttgatttcccctaattgatacactacacctatttctcatgaatatttctctagttttacgatgattaactaaaat 16056868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 401 - 513
Target Start/End: Original strand, 16060929 - 16061041
Alignment:
Q  401 gagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagc 500  Q
    ||||||||| ||||||| |||||| |||| | ||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  16060929 gagagagatgagactaggtctttcgaatcatttgattttccctaattggtacactgcacctatttctcatgaatatttctctagttttacgatgattaac 16061028  T
Q  501 taaaatggcccta 513  Q
    |||||| ||||||    
T  16061029 taaaatagcccta 16061041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 16060465 - 16060581
Alignment:
Q  232 aaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttatttta 331  Q
    ||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| || |||||||| | |||| |||||| |||| |||    
T  16060465 aaactattgaagtaatacaattaagttcttttccatgagaaccgtgttaatctcaagtaaacaatagcattatgaaacaggatgtgtaaag-ttatatta 16060563  T
Q  332 gtgcccgaggcagtaggt 349  Q
    ||||||||||||| ||||    
T  16060564 gtgcccgaggcagcaggt 16060581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 420 - 513
Target Start/End: Original strand, 13430938 - 13431031
Alignment:
Q  420 ctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    ||||| |||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||||||||| ||| || |||| ||||||    
T  13430938 ctttcgaatcctctgagttcccctaattggtacactgcacttagttctcatgaatatttctctagttttacgatggttaacttaaatagcccta 13431031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 382
Target Start/End: Original strand, 29642996 - 29643160
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   || ||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   |||||    ||||||    
T  29642996 ttagcaagtgtactaaaaatgcattgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaatttagcaataaagttattttctaagat 29643094  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
    | |||||  ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||    
T  29643095 gtgtaaa--ttattttagtgtccgaggcagtaggtttgtgtgcttaaaaagtaaataacagaaaataa 29643160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 411 - 513
Target Start/End: Original strand, 27331748 - 27331850
Alignment:
Q  411 agactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcc 510  Q
    ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||  | |||||||||| |||||| |||||| ||| ||||||| |||    
T  27331748 agactaggtctttcgaatcctctgagtttccctaattggtacaatgcacctatttcctatgaatatttctctagtttcacgatggttaactaaaatagcc 27331847  T
Q  511 cta 513  Q
    |||    
T  27331848 cta 27331850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 331 - 466
Target Start/End: Original strand, 34065048 - 34065188
Alignment:
Q  331 agtgcccgaggcagtaggtttgtg-tgcataaaaagtaaata-acataaaataagg-ttgtttataaaagata--gagagagattagactagatctttca 425  Q
    ||||| |||||||||||||||||| |||||||| |||||||| ||| ||||||| | ||||||  ||||||||  ||||||||| ||||||| ||||||     
T  34065048 agtgctcgaggcagtaggtttgtgctgcataaacagtaaatagacaaaaaataaagattgtttggaaaagatatggagagagatgagactaggtctttcg 34065147  T
Q  426 aatcctctgagttcccctaattggtacactgcacctatttc 466  Q
    |||||||||||||  ||||||||||||| |||| |||||||    
T  34065148 aatcctctgagttttcctaattggtacaatgcatctatttc 34065188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 27536309 - 27536556
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||| |||||||||||| || || ||   |||||  |||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  27536309 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcacacgaggactgtgttaatctcaatttagcaataaggttaatatttaggatg 27536405  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattag 412  Q
     ||||| ||| ||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| ||    
T  27536406 tgtaaa-tttcttttagtgcccgaggcagtagttttgattgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatgag 27536504  T
Q  413 actagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |  || |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  27536505 atcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 27536556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 506
Target Start/End: Original strand, 27355648 - 27355753
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattag 499  Q
    |||||||||| | ||||| |||||| |||  |||||||| |||||||||||||||||||||||||||  | |||||||||| |||||| |||||| |||     
T  27355648 agagagagatgaaactaggtctttcgaata-tctgagtttccctaattggtacactgcacctatttcctatgaatatttctctagtttcacgatggttaa 27355746  T
Q  500 ctaaaat 506  Q
    |||||||    
T  27355747 ctaaaat 27355753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 513
Target Start/End: Original strand, 16055528 - 16055640
Alignment:
Q  401 gagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagc 500  Q
    ||||||||| ||||||| |||| | |||| | ||| || || ||||||||||||| |||||| |||||| |||||||| | |||||||| |||||||| |    
T  16055528 gagagagatgagactaggtcttccgaatcatttgattttccttaattggtacactacacctacttctcatgaatatttttttagttttatgatgattaac 16055627  T
Q  501 taaaatggcccta 513  Q
    |||||| ||||||    
T  16055628 taaaatagcccta 16055640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 352
Target Start/End: Original strand, 11666784 - 11666906
Alignment:
Q  231 aaaactatcgaagtaatacaattaa-gttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttattt 329  Q
    |||||||||||||||||| |||||| |||||||||||| || |||||| |||| ||||  ||||| | ||||||  ||||| |||| |||||| ||||||    
T  11666784 aaaactatcgaagtaataaaattaaagttcgtttccacaaggaccgtgataatatcaataaaacagtagcgttaataaataggatgtgtaaaggttattt 11666883  T
Q  330 tagtgcccgaggcagtaggtttg 352  Q
    |  ||||| ||||||||| ||||    
T  11666884 tgttgccctaggcagtagatttg 11666906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 306
Target Start/End: Original strand, 27331551 - 27331640
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatga 306  Q
    ||||||||||| |||||| |||||||||||||| ||| |||||| |||||||||| ||||||||||||||   ||||||||  ||||||||    
T  27331551 ttagcaagtgtcctaaaa-ctatcgaagtaatataataaagttcatttccacgaggaccgtgttaatctcggttaaacaataacgttatga 27331640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 324 - 464
Target Start/End: Original strand, 3796708 - 3796851
Alignment:
Q  324 ttattttagtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggttgtttataaaaga--tagagagagattagactagatc 420  Q
    ||||||||||||  |||||||||| |||| | ||||||||||||||||||||||||||||| | |  |   |||||   |||||||||| ||  ||| ||    
T  3796708 ttattttagtgcatgaggcagtagttttggtttgcataaaaagtaaataacataaaataagatagagttggaaagaataagagagagatgagtttaggtc 3796807  T
Q  421 tttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||| |||| |||  |||||||||||||||| ||||||||||||    
T  3796808 tttcgaatcatctatgttcccctaattggtatactgcacctatt 3796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 13430155 - 13430246
Alignment:
Q  272 accgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttattttagtgcccgaggcagtaggtttg-tgtgcataaaa 363  Q
    ||||| |||||||||||||||||||  | |||||||||| |||| || ||| |||||||||||||| ||| |||||||||| |||||||||||    
T  13430155 accgtattaatctcaagtaaacaataactttatgaaataggatgtgtcaag-ttattttagtgccccaggtagtaggtttgttgtgcataaaa 13430246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 400
Target Start/End: Original strand, 27355186 - 27355262
Alignment:
Q  324 ttattttagtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggttgtttataaaagata 400  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| | | ||| ||| |||||||| ||||||||    
T  27355186 ttattttagtgcccgaggcagtaggtttgttgtgcat-aaaagtaaattatagaaattaaagttgtttagaaaagata 27355262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 2405868 - 2405797
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  2405868 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 2405797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 30938444 - 30938492
Alignment:
Q  324 ttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||    
T  30938444 ttattttactgcccgaggcagtaggtttgtgtgcataaaagttaaataa 30938492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 42022803 - 42022739
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||  |||  |||||||||||    
T  42022803 agagagagatgagactagatctttcgaatcctctgagttcctctaatcagtatgctgcacctatt 42022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 49498458 - 49498522
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| |||| ||| ||||||||||||||||| ||||||||||||    
T  49498458 agagagagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctatt 49498522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 466
Target Start/End: Original strand, 21434438 - 21434501
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttc 466  Q
    ||||||| ||||||| || ||| |||||| ||||||| ||||||||||||||| ||||||||||    
T  21434438 gagagatgagactaggtcattcgaatcctatgagttctcctaattggtacactacacctatttc 21434501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 494
Target Start/End: Original strand, 34732340 - 34732415
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatg 494  Q
    |||||| |||||||||||||||||||||||||| ||||||  ||||||| | ||||  |||| |||||| ||||||    
T  34732340 tctttcgaatcctctgagttcccctaattggtatactgcaattatttcttacgaatgattctctagtttcacgatg 34732415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 1950420 - 1950480
Alignment:
Q  404 agagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||| ||||||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  1950420 agagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 1950480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 23021888 - 23021948
Alignment:
Q  404 agagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||| ||| ||| |||||| |||| ||| ||||||||||||||||| ||||||||||||    
T  23021888 agagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctatt 23021948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 28111219 - 28111155
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  ||||||||| |||| |||  |||||||||||||||| ||||||||||||    
T  28111219 agagagagatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctatt 28111155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 50196844 - 50196888
Alignment:
Q  338 gaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||    
T  50196844 gaggcaataggtttgtgtgcataaaaaataaataacagaaaataa 50196888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 1950224 - 1950292
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  1950224 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 1950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 2794573 - 2794505
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  2794573 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 2794505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 28111402 - 28111334
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  28111402 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 28111334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 49716721 - 49716667
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgt 276  Q
    ||||||||| ||||||||||||||||||  ||| |||||||| |||||||| |||||    
T  49716721 caagtgtaccaaaaactatcgaagtaat--aataaagttcgtatccacgaggaccgt 49716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 49720203 - 49720149
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgt 276  Q
    ||||||||| ||||||||||||||||||  ||| |||||||| |||||||| |||||    
T  49720203 caagtgtaccaaaaactatcgaagtaat--aataaagttcgtatccacgaggaccgt 49720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 467
Target Start/End: Original strand, 11666981 - 11667028
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttct 467  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||||||    
T  11666981 tctttcgaatcctctgatttccc-taattggtatactgcacctatttct 11667028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 352
Target Start/End: Original strand, 27331641 - 27331669
Alignment:
Q  324 ttattttagtgcccgaggcagtaggtttg 352  Q
    |||||||||||||||||||||||||||||    
T  27331641 ttattttagtgcccgaggcagtaggtttg 27331669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 2e-69; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 216 - 506
Target Start/End: Original strand, 22993461 - 22993750
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||||| ||||||||  || ||||||||| ||||    
T  22993461 ttagcaagtgtactaaaaactatcgaagtaataaaataaagttcgtttccacgaggatcgtgttaatctcaattaaacaataacgatatgaaataggatg 22993560  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtg-tgcataaaaagtaaataacataaaat-aaggttgtttataaaagatagagagagattaga 413  Q
     |||||  ||||||||||||| ||||||  ||||||||  ||||||| | |||||||| | ||||| || |||||||| ||||||||||||||||| |||    
T  22993561 tgtaaa--ttattttagtgcctgaggcaagaggtttgttatgcataata-gtaaataatagaaaattaaagttgtttagaaaagatagagagagatgaga 22993657  T
Q  414 ctagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    |||| |||||| |||||||| |||||||||||||||||||||||||||||||   | ||||| |||| ||||||||||||| ||| |||||||    
T  22993658 ctaggtctttcgaatcctctaagttcccctaattggtacactgcacctatttactatgaatacttctctagttttacgatggttaactaaaat 22993750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 220 - 460
Target Start/End: Complemental strand, 18542981 - 18542740
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagt-aaacaattgcgttatgaaataagatgagt 318  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||||||| ||| |||||||||||||||| | |||||||  |||||| | ||| |||| ||    
T  18542981 caagtgtactaaaa-ctatcgaattaataaaatcaagttcgtttccatgaggaccgtgttaatctcaatttaaacaataacgttattatataggatgtgt 18542883  T
Q  319 aaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaat-aaggttgtttataaaagatagagagagattagactag 417  Q
    || |||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||  | ||| || |||| |||| ||| |||||||| |||  |     
T  18542882 aatgtttattttaatgctcgaggcagtaggtttgtgtgcataaaaagtaaataacagaagttaaagtttctttagaaaatataaagagagatgagatcat 18542783  T
Q  418 atctttcaaatcctctgagttcccctaattggtacactgcacc 460  Q
     |||||| ||||||||||||||||||| ||||| |||||||||    
T  18542782 gtctttcgaatcctctgagttcccctatttggttcactgcacc 18542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 464
Target Start/End: Complemental strand, 47051926 - 47051678
Alignment:
Q  219 gcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgag 317  Q
    ||||||||||||||||   |||||||||||| |||||||||||| |||||||| ||  |||||||||||| | | ||||  | |||  |  ||  ||| |    
T  47051926 gcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactatgttaatctcaatttagcaataacattaatatctagcatgtg 47051827  T
Q  318 taaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattagac 414  Q
    |||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |||     
T  47051826 taaa-tttcttttagtgcccgaggcagtaggttggtgtgcataaaaagtaaataacagaaaataagatagttttggaaaagacaatgagagagatgagat 47051728  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
     || |||||| |||| |||  |||||||||| ||||| ||||||||||||    
T  47051727 caggtctttcgaatcatctatgttcccctaactggtatactgcacctatt 47051678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 2279410 - 2279548
Alignment:
Q  231 aaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttatttt 330  Q
    |||||||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || |||| ||||| |||||       
T  2279410 aaaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaattttata-- 2279506  T
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  2279507 agtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 2279548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 2784458 - 2784306
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  2784458 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttagtatctaggatg 2784361  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||| ||||    
T  2784360 tgtaaacttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtatataa 2784306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 19304640 - 19304701
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||| ||||||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  19304640 gagagatgagactaggtctttcaaatcctctgagttcccctgcttggtacactgcacctatt 19304701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 513
Target Start/End: Complemental strand, 17546102 - 17545991
Alignment:
Q  401 gagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagc 500  Q
    ||||||||| |||  ||||||||| |||| |||| |||||||||||||||| ||||||||||||||| | ||||  |||| |||||| |||||| ||| |    
T  17546102 gagagagatgagatcagatctttcgaatcttctg-gttcccctaattggtatactgcacctatttcttatgaatgattctctagtttcacgatggttaac 17546004  T
Q  501 taaaatggcccta 513  Q
    |||||| ||||||    
T  17546003 taaaatagcccta 17545991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 236 - 383
Target Start/End: Complemental strand, 47055338 - 47055192
Alignment:
Q  236 tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttattttagtgc 335  Q
    ||||||||||||| ||||| |||||| |||||||| |  ||||||||||||| | |  |||  |||||  |  || |||| ||||| ||| |||||||||    
T  47055338 tatcgaagtaataaaattaggttcgtatccacgaggattgtgttaatctcaatttagaaataacgttaatatctaggatgtgtaaa-tttcttttagtgc 47055240  T
Q  336 ccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataag 383  Q
    || |||||||||||| ||||||||||||| |||| |||| ||||||||    
T  47055239 ccaaggcagtaggttggtgtgcataaaaactaaagaacagaaaataag 47055192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 219 - 368
Target Start/End: Original strand, 30157810 - 30157956
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagt 318  Q
    |||||||||| || |||||||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || |||| ||    
T  30157810 gcaagtgtaccaataactatcgaagtaata-aattaagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgt 30157908  T
Q  319 aaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaa 368  Q
    ||| ||||  | | || | |||||||||||||||||||||||||||||||    
T  30157909 aaatttta--taattgtctgaggcagtaggtttgtgtgcataaaaagtaa 30157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 3306200 - 3306133
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||| || |||||||||||||||| |||||||||||| |||||||| || |||||||||||||    
T  3306200 gcaagtgtaccaataactatcgaagtaata-aattaagttcgtatccacgaggactgtgttaatctcaa 3306133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 10963750 - 10963594
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaa---gttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataag 312  Q
    |||||||| ||||||||| |||||||||||||| || |||   |||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || |    
T  10963750 ttagcaagcgtactaaaa-ctatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 10963652  T
Q  313 atgagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    ||| ||||| ||| |   |||||| |||||||||||||||||||||||||||||||||||    
T  10963651 atgtgtaaattttgta--agtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 10963594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 10967144 - 10967103
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  10967144 agtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 10967103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 19301456 - 19301517
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||| ||||||| |||||| |||||||||||||||| || ||| |||||||||||||||    
T  19301456 gagagatgagactaggtctttcgaatcctctgagttcccgtatttgctacactgcacctatt 19301517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 31549622 - 31549555
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||| ||||||||||||||||||| || ||||||||| |||||||  || |||||||||||||    
T  31549622 gcaagtgtaccaaaaactatcgaagtaata-aaataagttcgtatccacgatgactgtgttaatctcaa 31549555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 42354179 - 42354257
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    |||||||||||||| |||||||||||||||||| || ||||||||| |||||||| || |||| |||||||| | ||||||    
T  42354179 ttagcaagtgtact-aaaactatcgaagtaata-aaataagttcgtatccacgaggactgtgtcaatctcaacttaacaat 42354257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 382
Target Start/End: Original strand, 54736095 - 54736142
Alignment:
Q  336 ccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  54736095 ccgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 54736142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 10960243 - 10960087
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaa---gttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataag 312  Q
    |||||||| ||||||||| |||||||||||||| || |||   |||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || |    
T  10960243 ttagcaagcgtactaaaa-ctatcgaagtaataaaaataataagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctagg 10960145  T
Q  313 atgagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    ||| ||||| ||| |   |||||| |||| ||||||||||||||||||||||||||||||    
T  10960144 atgtgtaaattttgta--agtgcctgaggtagtaggtttgtgtgcataaaaagtaaataa 10960087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 6434726 - 6434791
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    |||||||||| ||| ||| |||||| |||| |||  |||||||||||||||| |||||||||||||    
T  6434726 agagagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctattt 6434791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 16184447 - 16184515
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||||||||||| || |||||||||||||    
T  16184447 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgtttccacgaggactgtgttaatctcaa 16184515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 25888248 - 25888400
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||| |||||||| |||||||||||||| ||| |||||||| || ||||| || ||||||||||||| | | ||||    |||  |  || ||||    
T  25888248 ttagcaagtatactaaaa-ctatcgaagtaataaaat-aagttcgtatcgacgaggactgtgttaatctcaacttagcaataaaattaatatctatgatg 25888345  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||  ||||||||||||||||||||||||||| |||||||    
T  25888346 tgtaaatttta--taagtgcgtgaggcagtaggtttgtgtgcataaaaaataaataa 25888400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 4250737 - 4250575
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| || |||||  ||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  4250737 ttagcaagtgtactaaaa-ctatcgaagtaataaaataaa-ttcgta-ccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 4250641  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| || ||||||||||||||||| |||||| |||||||||| |||||||    
T  4250640 tgtaaattttata--agtgcctgaagcagtaggtttgtgtgcaataaaatgtaaataacagaaaataa 4250575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 10885099 - 10885039
Alignment:
Q  404 agagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||| ||||||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  10885099 agagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 10885039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 10902382 - 10902311
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  |||| |||||||| ||| |||||||| |||||||| || |||||||||||||    
T  10902382 ttagcaagtgtactaaaaatgtatctaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 10902311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 18883564 - 18883401
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||| ||||| || ||| |||||||| | |||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  18883564 ttagcaagtgtactaaaa-ctatcaaagtagtaaaat-aagttcgtattcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 18883467  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtg-cataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||||||||  |||||| |||||||||| |||||||    
T  18883466 tgtaaattttata--agtgcctgaggcagtaggtttgtgtgaaataaaaggtaaataacagaaaataa 18883401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 464
Target Start/End: Original strand, 8461428 - 8461499
Alignment:
Q  393 aaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||| |||||||| ||| ||| |||||| |||| |||  ||| |||||||||||| ||||||||||||    
T  8461428 aaaagataaagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctatt 8461499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 494
Target Start/End: Original strand, 3292943 - 3293000
Alignment:
Q  437 ttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatg 494  Q
    ||||||||||||||| | ||||||||||||| | ||||  ||||||||||| ||||||    
T  3292943 ttcccctaattggtatattgcacctatttcttatgaatgattctatagtttcacgatg 3293000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 7487001 - 7486933
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| ||||||||||||||| || ||   ||||| |||| || || |||||||||||||    
T  7487001 ttagcaagtgtactaaatactatcgaagtaataaaaata---tcgttcccacaaggactgtgttaatctcaa 7486933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 10106364 - 10106432
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  10106364 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 10106432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 24125929 - 24125861
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  24125929 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 24125861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 28266163 - 28266098
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| |||||||||||||    
T  28266163 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattt 28266098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 35412935 - 35412867
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  35412935 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 35412867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 44508967 - 44508934
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaa 364  Q
    |||||| |||||||||||||||||||||||||||    
T  44508967 agtgcctgaggcagtaggtttgtgtgcataaaaa 44508934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 55031947 - 55032008
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||| ||||||| |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  55031947 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 55032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 55034807 - 55034868
Alignment:
Q  403 gagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||| ||||||| |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  55034807 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 55034868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 2873810 - 2873746
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  2873810 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 2873746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 296
Target Start/End: Original strand, 6434538 - 6434618
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    |||||||||| |||||| |||||||||||||||  |  ||  ||||| ||||||| || ||||||||||||| | ||||||    
T  6434538 ttagcaagtgcactaaatactatcgaagtaataataaaaatatcgttcccacgaggactgtgttaatctcaatttaacaat 6434618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 6922766 - 6922702
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  6922766 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 6922702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 7486817 - 7486753
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  7486817 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 7486753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 16244315 - 16244244
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| ||| ||||| || | |||||| ||||||||||||||||    
T  16244315 ttagcaagtgtactaaaaatacatcgaagtaataaaat-aagtttgtatacacgaggaccgtgttaatctcaa 16244244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 23298563 - 23298627
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| |||| ||| ||||||| |||||||||  |||||||||||    
T  23298563 agagagagatgagattaggtctttcgaatcatctaagttcccttaattggtatgctgcacctatt 23298627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 32287271 - 32287335
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  32287271 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 32287335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 37408927 - 37408863
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  37408927 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 37408863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 52309384 - 52309455
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||| ||  ||||||| ||||    
T  52309384 ttagcaagtgtactaaaaatgtatcgaagtaata-aaataagttcgtatccacgaggacaatgttaatttcaa 52309455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 53816074 - 53816010
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  53816074 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 53816010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 111; Significance: 9e-56; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 216 - 513
Target Start/End: Complemental strand, 10286 - 9989
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||||| |||||||| || |||||| ||||||||||| ||  | |||||||||| | | ||||   ||||| | ||| ||||    
T  10286 ttagcaagtgtactaaaa-ctatcaaagtaataaaaataagtttgtttccacgaggactctattaatctcaatttagcaatatggttattatataggatg 10188  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaat-aaggttgtttataaaagatagagagagattagac 414  Q
     ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||  ||||||  ||||||||  ||||||| ||||    
T  10187 tgtaaagtttattttagtgctcgaggcagtaggtttgtttgcataaaaagtaaataacataaattaaatattgtttggaaaagataaggagagatgagac 10088  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    ||  |||||  |||||||||||||||||||||||||||||||||||||||||    |||||||||| || ||| |||||| ||| | ||||| ||||||    
T  10087 tatgtcttttgaatcctctgagttcccctaattggtacactgcacctatttccttcgaatatttctctaatttcacgatggttaaccaaaatagcccta 9989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 324 - 513
Target Start/End: Complemental strand, 34682920 - 34682731
Alignment:
Q  324 ttattttagtgcccgaggcagtaggtttgt-gtgcataaaaagtaaataacataaaataaggttgtttataaaagatagagagagattagactagatctt 422  Q
    ||||||||||| | |||||||||||||||| |||||||||| |||||||||||||| ||| |||||||| |||||||||||||| || ||||||  ||||    
T  34682920 ttattttagtgtctgaggcagtaggtttgttgtgcataaaa-gtaaataacataaattaaagttgtttagaaaagatagagagaaatgagactatgtctt 34682822  T
Q  423 tcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaatggcccta 513  Q
    || ||||||||||||| |||||||||||||||||||| ||||||  | || ||||||| |||||| |||||| ||| | ||||| ||||||    
T  34682821 tcgaatcctctgagtttccctaattggtacactgcacgtatttcctatgagtatttctctagtttcacgatggttaaccaaaatagcccta 34682731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 216 - 464
Target Start/End: Complemental strand, 45457492 - 45457241
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    ||||||||||||||||| |   |||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  45457492 ttagcaagtgtactaaatatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 45457393  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| |||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  45457392 gtgtaaa-tttgttttagtgcctgagacagtaggttggtgtgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatga 45457294  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||  || |||||| |||| ||| |||||||||||||| || ||||||||||||    
T  45457293 gatcaggtctttcgaatcatctaagttcccctaattgttatactgcacctatt 45457241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 216 - 383
Target Start/End: Complemental strand, 45454204 - 45454037
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    ||||||||||||||||| |   |||||||||||| ||||||||| || |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  45454204 ttagcaagtgtactaaatatgcatcgaagtaataaaattaagtttgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 45454105  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataag 383  Q
    | ||||| ||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  45454104 gtgtaaa-tttgttttagtgcctgaggcagtaggttggtgtgcataaaaagtaaataacagaaaataag 45454037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 31427316 - 31427567
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||  || ||||||||||||| | | ||||   ||||  |  || |||    
T  31427316 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaagactgtgttaatctcaatttagcaataaggttaatatttaggat 31427415  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||| ||||||||||||||||||| | ||||  |||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  31427416 gtgtaaa-tttcttttagtgcccgaggcagtggttttgattgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatga 31427514  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||  || |||||| |||| ||   |||||||||||||||| ||||||||||||    
T  31427515 gatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 31427567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 464
Target Start/End: Original strand, 36808239 - 36808468
Alignment:
Q  236 tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttattttagtgc 335  Q
    ||||||||||||| |||||||||||| |||||||| || || |||||||||| | | ||||   ||||  |  || |||| ||||| |||||   ||||     
T  36808239 tatcgaagtaataaaattaagttcgtatccacgaggactgtattaatctcaatttagcaataaggttaatatctaggatgtgtaaattttata--agtga 36808336  T
Q  336 ccgaggcagtaggtttgtgtgcataaaaagtaaataa-cataaaataaggttgtttat-aaaagata--gagagagattagactagatctttcaaatcct 431  Q
      ||||||||||||||||||||||||||  ||||||| || |||||||  | ||||   ||||||||  ||||||||| |||  || |||||||||||||    
T  36808337 ttgaggcagtaggtttgtgtgcataaaat-taaataaacagaaaataaaatagttttggaaaagataaggagagagatgagatcaggtctttcaaatcct 36808435  T
Q  432 ctgagttcccctaattggtacactgcacctatt 464  Q
     | ||||||||||||||||||||||||||||||    
T  36808436 ttaagttcccctaattggtacactgcacctatt 36808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 13518641 - 13518493
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  13518641 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 13518544  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaa 368  Q
     ||||| ||||  | ||||   |||||||||||||||||||||||||||||||    
T  13518543 tgtaaatttta--taagtgtttgaggcagtaggtttgtgtgcataaaaagtaa 13518493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 365
Target Start/End: Complemental strand, 11060137 - 11059992
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||| |||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  11060137 ttagcaaatgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgagaactgtgttaatctcaacttagcaataaagttaatatctaggatg 11060040  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaag 365  Q
     ||||| ||||  | |||| | ||||||||||||||||||||||||||||    
T  11060039 tgtaaatttta--taagtgtctgaggcagtaggtttgtgtgcataaaaag 11059992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 4578069 - 4578017
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  4578069 agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 4578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 8888779 - 8888715
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| ||||||||||| |||  |||||||||||||||| ||||||||||||    
T  8888779 agagagagatgagattaggtctttcaaatcatctatgttcccctaattggtatactgcacctatt 8888715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 43724039 - 43723968
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  43724039 ttagcaagtgtactaaaaatatatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 43723968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 1503201 - 1503270
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| || ||||| |||||||| || |||||||||||||    
T  1503201 ttagcaagtgtactaaaa-ctatcgaagtaataaaataaa-ttcgtatccacgaggactgtgttaatctcaa 1503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 1506405 - 1506474
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| || ||||| |||||||| || |||||||||||||    
T  1506405 ttagcaagtgtactaaaa-ctatcgaagtaataaaataaa-ttcgtatccacgaggactgtgttaatctcaa 1506474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 3252657 - 3252590
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||||||||||||||||     || || ||||||||||| || |||||||||||||    
T  3252657 ttagcaagtgtactaaaaactatcgaagtaata----aaaatttgtttccacgagaactgtgttaatctcaa 3252590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 11056568 - 11056531
Alignment:
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaa 368  Q
    |||||| |||||||||||||||||||||||||||||||    
T  11056568 agtgcctgaggcagtaggtttgtgtgcataaaaagtaa 11056531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 29440821 - 29440753
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||||||||||| || |||||||||||||    
T  29440821 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgtttccacgaggactgtgttaatctcaa 29440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 25138703 - 25138774
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||||||| |  |||||||||||||    
T  25138703 ttagcaagtgtactaaaaatatatcgaagtaata-aaataagttcgtatccacgagaaatgtgttaatctcaa 25138774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 15719057 - 15719122
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||| |||| ||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  15719057 caagtgtactaaaa-ctatggaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 15719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 464
Target Start/End: Original strand, 17874582 - 17874613
Alignment:
Q  433 tgagttcccctaattggtacactgcacctatt 464  Q
    ||||||||||||||||||||||||||||||||    
T  17874582 tgagttcccctaattggtacactgcacctatt 17874613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 5105911 - 5105806
Alignment:
Q  361 aaaagtaaataacataaaataagg--ttgtttataaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgca 458  Q
    |||| ||||||||||||||||| |  ||| ||| |||| ||  |||||||| |||  || ||||||||||  |||  |||||||||||||||| ||||||    
T  5105911 aaaattaaataacataaaataaagatttggttagaaaatatgaagagagatgagatcaggtctttcaaattatctatgttcccctaattggtatactgca 5105812  T
Q  459 cctatt 464  Q
    ||||||    
T  5105811 cctatt 5105806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 8888962 - 8888894
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  8888962 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 8888894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 24238698 - 24238630
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  24238698 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 24238630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 45499137 - 45499205
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  45499137 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 45499205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 9188614 - 9188678
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  9188614 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 9188678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 12219939 - 12219875
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  12219939 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 12219875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 16790719 - 16790783
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  16790719 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16790783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 25820619 - 25820690
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| || ||||||||| |||||||| || |||||||| ||||    
T  25820619 ttagcaagtgtactaaaaatgcatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatttcaa 25820690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 26366253 - 26366182
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||| ||||||||||||||   |||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  26366253 ttagtaagtgtactaaaaatgcatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 26366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 37279638 - 37279702
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  37279638 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 37279702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 42368478 - 42368510
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaata 248  Q
    ||||||||||||||||| |||||||||||||||    
T  42368478 ttagcaagtgtactaaatactatcgaagtaata 42368510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 7e-38; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 216 - 506
Target Start/End: Complemental strand, 5796884 - 5796596
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| || ||||||||| |||||||  || ||||||||||||| | | ||||   ||||  |  || ||||    
T  5796884 ttagcaagtgtactaaaa-ctatcgaagtaataaaaataagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatg 5796786  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggtt-gtttataaaagatagagagagattagac 414  Q
     ||||| |||||   |||| |  ||||| || ||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||  ||||||| ||||    
T  5796785 tgtaaattttata--agtgtctaaggcaatatgtttgtgtgcataaaaagtaaataacagaaaataaagtttgtttagaaaagatatggagagatgagac 5796688  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatgattagctaaaat 506  Q
    ||  |||||| | |||| || |||||||||||||||||||  ||||||||||| ||||||| |||| |||||| | ||||| || |||||||    
T  5796687 taagtctttcgagtcctttgggttcccctaattggtacacaacacctatttcttaagaataattctctagtttcatgatgactaactaaaat 5796596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 216 - 330
Target Start/End: Original strand, 18559990 - 18560104
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||| ||||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||||||||||||| || |||| ||||| ||||    
T  18559990 ttagcaaatgtactaaaaactatcgaagtcatataataaagttcgattccacgaggaccgtgttaatctcaagtaaacaatagcattattaaataggatg 18560089  T
Q  316 agtaaagtttatttt 330  Q
     ||||||||||||||    
T  18560090 tgtaaagtttatttt 18560104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 11397830 - 11398079
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  11397830 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 11397929  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagatta 411  Q
    | ||||| ||    |||||||||||||||||||| | ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |    
T  11397930 gtgtaaatttc---ttagtgcccgaggcagtaggatggtgtgcataaaaagtaaataacagaaaataagatagttttggaaaagacaatgagagagatga 11398026  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    || ||| |||||| | || ||   |||||||||||||||| |||| |||||||    
T  11398027 gattaggtctttcgattcatcgatgttcccctaattggtatactgtacctatt 11398079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 11825135 - 11825287
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  11825135 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 11825232  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| ||||  | |||||| |||||||||||||||||||||||||||||||||||    
T  11825233 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 11825287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 18560828 - 18560913
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgt 301  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||| |||| ||| ||||| ||||||||||||||| ||||    
T  18560828 ttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccgcgaggaccatgttattctcaagtaaacaatagcgt 18560913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 219 - 465
Target Start/End: Complemental strand, 16166077 - 16165832
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagt 318  Q
    |||||||||| ||| |||||||||||| || || ||   ||||| |||| || || ||||||||||||| | | ||||  |||||  |  || |||| ||    
T  16166077 gcaagtgtaccaaatactatcgaagtagtaaaaata---tcgttcccacaaggactgtgttaatctcaatttatcaataacgttaatatctaggatgtgt 16165981  T
Q  319 aaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattagact 415  Q
    ||| ||| ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |||      
T  16165980 aaa-tttcttttagtgcccgaggcagtagattggtgtgcataaaaagtaaataacagaaaataagatagttttggaaaagacaaggagagagatgagatc 16165882  T
Q  416 agatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    || |||||| |||| ||   |||||||||||||||| |||||||||||||    
T  16165881 aggtctttcgaatcatcgatgttcccctaattggtatactgcacctattt 16165832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 26153503 - 26153340
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  | ||| ||||    
T  26153503 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatataggatg 26153406  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||||  |||||||||||||||||||| ||||||||||||||||| |||||||    
T  26153405 tgtaaatttta--taagtgcatgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 26153340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 372
Target Start/End: Original strand, 5826488 - 5826640
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||| | |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  5826488 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcttatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 5826585  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
     ||||| |||  || |||||| |||||||||||||||||||||||||||||||||||    
T  5826586 tgtaaatttt--ttaagtgcctgaggcagtaggtttgtgtgcataaaaagtaaataa 5826640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 393 - 512
Target Start/End: Original strand, 18562490 - 18562609
Alignment:
Q  393 aaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacga 492  Q
    |||| |||||||||||| |||| |  ||||| |||||||||||||| ||||||||| |||| |||||||| |||| | ||||| |||| |||||||||||    
T  18562490 aaaatatagagagagatgagaccatgtctttaaaatcctctgagtttccctaattgatacattgcacctacttcttatgaatacttctctagttttacga 18562589  T
Q  493 tgattagctaaaatggccct 512  Q
    |  ||| ||||||| |||||    
T  18562590 tagttaactaaaatagccct 18562609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 368
Target Start/End: Complemental strand, 8398169 - 8398021
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  8398169 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 8398072  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaa 368  Q
     ||||| ||||  | |||||| ||||||||||||||||||| |||||||||||    
T  8398071 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtggataaaaagtaa 8398021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 22232406 - 22232475
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  22232406 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 22232475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 22254333 - 22254264
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  22254333 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 22254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 23776240 - 23776170
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||| |||||||| |||||||||||||| || |||||||||||| ||||| || |||||||||||||    
T  23776240 ttagcaagtatactaaaa-ctatcgaagtaataaaaataagttcgtttctacgaggactgtgttaatctcaa 23776170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 382
Target Start/End: Complemental strand, 8258233 - 8258074
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    |||||||||||||| |||||||||||||| ||| |||||||| || ||||| || ||||||||||||| | | ||||   ||||  |  || |||| |||    
T  8258233 caagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatctacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgta 8258136  T
Q  320 aagtttattttagtgcccgaggcagtaggtttgtgtg-cataaaaagtaaataacataaaataa 382  Q
    || ||||  | |||||| |||| ||||||||||||||  ||||||||||||||||| |||||||    
T  8258135 aatttta--taagtgcctgaggtagtaggtttgtgtgtaataaaaagtaaataacagaaaataa 8258074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 26557843 - 26557772
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||| ||||||||||||| || ||||||| | |||||||| || |||||||||||||    
T  26557843 ttagcaagtgtactaaaaacgtatcgaagtaata-aaataagttcatatccacgaggactgtgttaatctcaa 26557772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 5242116 - 5242183
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttct 467  Q
    |||||||||| |||  || |||||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  5242116 agagagagatgagatcaggtctttcgaatcttctgagttcccttaattggtatactgcacctatttct 5242183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 464
Target Start/End: Complemental strand, 48645663 - 48645558
Alignment:
Q  361 aaaagtaaataacataaaataaggtt--gtttataaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgca 458  Q
    |||||||||||||| ||||||| | |  ||||  |||| |||  ||||||| |||||||||||||| |||| ||   |||||||||||||||| ||||||    
T  48645663 aaaagtaaataacagaaaataaagatatgtttggaaaatatatggagagatgagactagatctttcgaatcatcgatgttcccctaattggtatactgca 48645564  T
Q  459 cctatt 464  Q
    ||||||    
T  48645563 cctatt 48645558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 10345520 - 10345449
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| |  |||||||||||||    
T  10345520 ttagcaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggattgtgttaatctcaa 10345449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 10469292 - 10469228
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  |||||||||| |||| |||  |||||||||||| ||||||||||||||||    
T  10469292 agagagagatgagtttagatctttcgaatcatctatgttcccctaattagtacactgcacctatt 10469228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 35961444 - 35961373
Alignment:
Q  216 ttagcaagtgtactaaaaac-tatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||| ||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  35961444 ttagaaagtgtactaaaaatgtatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 35961373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 45290446 - 45290510
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  45290446 agagagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 45290510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 494
Target Start/End: Complemental strand, 7227657 - 7227583
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgatg 494  Q
    |||||| ||||||||| |||||||| ||||||| ||||||||||||||| | ||||  |||| |||||| ||||||    
T  7227657 tctttcgaatcctctg-gttcccctgattggtatactgcacctatttcttacgaatgattctctagtttcacgatg 7227583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 13907579 - 13907650
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||||||||| ||||| ||| || ||||||| | | ||| || || |||||||||||||    
T  13907579 ttagcaagtgtactaaaaactatagaagtgataaaaataagttcatatgcacaaggactgtgttaatctcaa 13907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 44363607 - 44363676
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||| ||||| ||||||||||||| || ||||||||| ||| |||| || |||||||||||||    
T  44363607 ttagcaagtgtaccaaaaa-tatcgaagtaata-aagtaagttcgtatcctcgagaactgtgttaatctcaa 44363676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 4543138 - 4543070
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  4543138 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 4543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 494
Target Start/End: Original strand, 13809476 - 13809576
Alignment:
Q  393 aaaagatagagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacga 492  Q
    |||| |||||||||||| |||  |  |||||| |||||||||| ||||| ||||||||| ||||||||||||| | | ||||  |||| |||||| ||||    
T  13809476 aaaatatagagagagatgagatcaagtctttcgaatcctctga-ttcccttaattggtatactgcacctatttattacgaatgattctctagtttcacga 13809574  T
Q  493 tg 494  Q
    ||    
T  13809575 tg 13809576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 22257583 - 22257519
Alignment:
Q  231 aaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaat 296  Q
    |||||||||||||||||| ||| ||| |||| |||||||| || ||||||||||||| | ||||||    
T  22257583 aaaactatcgaagtaataaaat-aagatcgtatccacgaggactgtgttaatctcaacttaacaat 22257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Complemental strand, 10345343 - 10345279
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  10345343 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 10345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 26136094 - 26136158
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  26136094 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 26136158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 26144474 - 26144538
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  26144474 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 26144538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 37415389 - 37415453
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| |||  || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  37415389 agagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 37415453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 45287035 - 45287099
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||| ||| |||||| |||| |||  ||| |||||||||||| ||||||||||||    
T  45287035 agagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctatt 45287099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 48645811 - 48645740
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| || ||||||||| |||||||| || |||||||| ||||    
T  48645811 ttagcaagtgtactaaaaatgcatcgaagtaata-aaataagttcgtatccacgaggactgtgttaatttcaa 48645740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 4e-33; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 14589397 - 14589646
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| | |||||| || ||||||||||||| | | ||||   ||||     || ||||    
T  14589397 ttagcaagtgtactaaaat-tatcgaagtaataaaattaagttcgtattcacgaggactgtgttaatctcaatttagcaataatgttaatgtgtaggatg 14589495  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattag 412  Q
     ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||  |||||| |  ||||||||| ||    
T  14589496 tgtaaa-tttcttttagtgcccgaggcagtaggttggtgtgcataaaaagtaaataacataaaataagatagttttggaaaagacaaggagagagatgag 14589594  T
Q  413 actagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    | ||| | |||| |||| ||   |||||||||||||||| ||||||||||||    
T  14589595 attaggtatttcgaatcatcgatgttcccctaattggtatactgcacctatt 14589646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 382
Target Start/End: Original strand, 33883124 - 33883289
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||| || ||||||||||||| | | ||| | |||||  | ||| |||    
T  33883124 ttagcaagtgtactaaaaatgcatcgaagtaataaaattaagttcgtatccacgaggactgtgttaatctcaatttagcaa-tacgttaatatataggat 33883222  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
    | ||||| ||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||| |||||||    
T  33883223 gtgtaaa-tttcttttagtgcccaaggtagtaggttggtgtgtataaaaagtaaataacagaaaataa 33883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 30645824 - 30645661
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   || |  | ||| ||||    
T  30645824 ttagcaagtgtactaaaat-tatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagtaaatatataggatg 30645727  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  30645726 tgtaaattttata--agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 30645661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 327 - 464
Target Start/End: Original strand, 36710522 - 36710661
Alignment:
Q  327 ttttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttg-tttataaaagata--gagagagattagactagatcttt 423  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| | | |||  |||||| |  ||||||||| |||  || |||||    
T  36710522 ttttagtgcccaaggcagtaggttggtgtgcataaaaagtaaataaca-aaaataagatagttttggaaaagacaaggagagagatgagatcaggtcttt 36710620  T
Q  424 caaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    | |||| ||   |||||||||||||||| ||||||||||||    
T  36710621 cgaatcatcgatgttcccctaattggtatactgcacctatt 36710661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 31981699 - 31981536
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| || | ||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  31981699 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 31981602  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  31981601 tgtaaattttata--agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 31981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 369
Target Start/End: Complemental strand, 14188510 - 14188361
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| |||||||| || | ||||||||||| | | ||||   ||||  |  || ||||    
T  14188510 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatccacgaggactgcgttaatctcaacttagcaataaagttaatatctaggatg 14188413  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaa 369  Q
     ||||| ||||  | |||||| ||||||||||||||||||| ||||||||||||    
T  14188412 tgtaaatttta--taagtgcctgaggcagtaggtttgtgtgtataaaaagtaaa 14188361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 20262890 - 20262742
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    |||||||||||||| |||||||||||||||| | |||||||| |||||||  || ||||||||||||| | | ||||   ||||  |  || |||| |||    
T  20262890 caagtgtactaaaa-ctatcgaagtaatacagt-aagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtgta 20262793  T
Q  320 aagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    || |||||   ||||||  ||||||||||||||||||||||||||||||||||    
T  20262792 aattttata--agtgcctcaggcagtaggtttgtgtgcataaaaagtaaataa 20262742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 372
Target Start/End: Complemental strand, 21049520 - 21049372
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    |||||||||||||| |||||||||||||||| | |||||||| |||||||  || ||||||||||||| | | ||||   ||||  |  || |||| |||    
T  21049520 caagtgtactaaaa-ctatcgaagtaatacagt-aagttcgtatccacgaagactgtgttaatctcaacttagcaataaagttaatatctaggatgtgta 21049423  T
Q  320 aagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    || |||||   ||||||  ||||||||||||||||||||||||||||||||||    
T  21049422 aattttata--agtgcctcaggcagtaggtttgtgtgcataaaaagtaaataa 21049372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 31986626 - 31986463
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| | |||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  31986626 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 31986529  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||| | |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  31986528 tgtaaatttta--taagtgtctgaggcagtaggtttttgtgcaataaaaagtaaataacagaaaataa 31986463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 372
Target Start/End: Complemental strand, 5964581 - 5964443
Alignment:
Q  231 aaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagtaaagtttatttt 330  Q
    |||||||||||||||||| ||| |||||||| |||| ||| || ||||||||||||| | | ||||   ||||  |  || |||| ||||| |||||       
T  5964581 aaaactatcgaagtaataaaat-aagttcgtatccatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatgtgtaaattttata-- 5964485  T
Q  331 agtgcccgaggcagtaggtttgtgtgcataaaaagtaaataa 372  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  5964484 agtgcctgagacagtaggtttgtgtgcataaaaagtaaataa 5964443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 8911805 - 8911743
Alignment:
Q  402 agagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||| ||  ||| |||||| |||||||||||||||||||||||||| ||||||||||||    
T  8911805 agagagataagtttaggtctttcgaatcctctgagttcccctaattggtatactgcacctatt 8911743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 363
Target Start/End: Original strand, 45155042 - 45155189
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaat---taagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataag 312  Q
    |||||||||||||||||| |||||||||||||| |||   ||||||||| |||||  | |||||||||||||||| | | ||||   ||||  |  || |    
T  45155042 ttagcaagtgtactaaaa-ctatcgaagtaataaaatttataagttcgtatccacagggaccgtgttaatctcaatttagcaataaggttaatatctagg 45155140  T
Q  313 atgagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaa 363  Q
    ||| |||||  |||||||||||||||||||||||| ||||  |||||||||    
T  45155141 atgtgtaaa--ttattttagtgcccgaggcagtagttttgattgcataaaa 45155189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 5980072 - 5980138
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||| ||||||||||||||||||| |  ||||||||| |||||||| || |||||||||||||    
T  5980072 caagtgtaccaaaaactatcgaagtaata-acataagttcgtatccacgaggactgtgttaatctcaa 5980138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 219 - 464
Target Start/End: Complemental strand, 16954114 - 16953871
Alignment:
Q  219 gcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagt 318  Q
    |||||||||| ||| |||||||||||| || || ||   ||||| ||||||| || ||||||||||||| | ||||||  |||||  |  || |||| ||    
T  16954114 gcaagtgtaccaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaattcaacaataacgttaatatttaggatgtgt 16954018  T
Q  319 aaagtttattttagtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggtt-gtttataaaagat--agagagagattagac 414  Q
    |||  ||||||||||||| |||||||||| |||| | |||||||||  ||||||||| || |||| | | ||||   |||||   |||||||||| |||     
T  16954017 aaa--ttattttagtgcctgaggcagtagttttggtttgcataaaat-taaataacagaatataaagatagttttggaaagaataagagagagatgagat 16953921  T
Q  415 tagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
     || |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  16953920 caggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16953871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 464
Target Start/End: Original strand, 18721246 - 18721306
Alignment:
Q  404 agagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||| ||||||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  18721246 agagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 18721306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 23644163 - 23644094
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||| ||||||| |||||||| ||||| ||| |||||||| |||||||| || |||||||||||||    
T  23644163 ttagcaagtgaactaaaa-ctatcgaaataataaaat-aagttcgtatccacgaggactgtgttaatctcaa 23644094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 493
Target Start/End: Complemental strand, 30785059 - 30784985
Alignment:
Q  419 tctttcaaatcctctgagttcccctaattggtacactgcacctatttctcaagaatatttctatagttttacgat 493  Q
    |||||| |||||||| ||||||||||||||||| | || |||||||||| | ||||  |||| |||||| |||||    
T  30785059 tctttcgaatcctctaagttcccctaattggtatattgtacctatttcttacgaatgattctctagtttcacgat 30784985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 10664293 - 10664225
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  10664293 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 10664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 5538545 - 5538616
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||  ||||||||||||| || ||||||||| |||| ||| || |||||||| ||||    
T  5538545 ttagcaagtgtactaaaaatgtatcgaagtaata-aaataagttcgtatccatgaggactgtgttaatttcaa 5538616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 10498175 - 10498239
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  10498175 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 10498239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 14422087 - 14422016
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||| |||||||||||   |||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  14422087 ttagcaaatgtactaaaaatgcatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 14422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 23619325 - 23619389
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  23619325 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 23619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 220 - 464
Target Start/End: Original strand, 118227 - 118470
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatgagta 319  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||| |  ||||||||||||| | ||||||   ||||| |  || |||| |||    
T  118227 caagtgtactaaaaactatcgaagtaataaaaataagttcgtatccacgaggattgtgttaatctcaattcaacaataaagttattatctaggatgtgta 118326  T
Q  320 aagtttattttagtgcccgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggttgtt-tataaaagatagagagagattagactag 417  Q
    || ||| |||||||||||||||||||| ||||| | ||||| |||||||||||||| |||||||| | ||| |  |||||||   ||||||| | |  ||    
T  118327 aa-tttcttttagtgcccgaggcagtatgtttgttatgcat-aaaagtaaataacagaaaataagatagttctggaaaagatgaggagagatgatatcag 118424  T
Q  418 atctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
     |||||| |||||||||  ||||| |||||||| |||||||||||||    
T  118425 gtctttcgaatcctctg-tttcccttaattggtccactgcacctatt 118470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 464
Target Start/End: Original strand, 99009 - 99260
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||||||||| ||||||||||||| || ||| ||||| || ||||| |  ||||||||||||| | | ||||   ||||| |  || ||||    
T  99009 ttagcaagtgtactaaaaattatcgaagtaataaaaataatttcgtatctacgaggatggtgttaatctcaatttagcaataaagttattatctatgatg 99108  T
Q  316 agtaaagtttattttagtgcc----cgaggcagtaggtttg-tgtgcataaaaagtaaataacataaaataaggttg-tttataaaagatagagagagat 409  Q
     ||||| ||| ||||||||||    |||||||||||||||| |||| || |||||||||||||| |||||||| | | |||  |||||||   |||||||    
T  99109 tgtaaa-tttcttttagtgcccgatcgaggcagtaggtttgttgtgtat-aaaagtaaataacagaaaataagatagttttggaaaagatgaggagagat 99206  T
Q  410 tagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
     |||| || ||||||||||| | ||  |||| ||||||||| |||||||||||||    
T  99207 gagaccaggtctttcaaatcttttg-tttcctctaattggttcactgcacctatt 99260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 216 - 464
Target Start/End: Complemental strand, 90117 - 89867
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagat 314  Q
    |||||||||||||||||||   |||||||||||| ||| ||||| || |||||||| || ||||||||||||| | | ||||  |||||  |  || |||    
T  90117 ttagcaagtgtactaaaaatgcatcgaagtaataaaat-aagtttgtatccacgaggactgtgttaatctcaatttagcaataacgttaatatctaggat 90019  T
Q  315 gagtaaagtttattttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataaggttgttt---ataaaagatagagagagatta 411  Q
    | ||||| ||| |||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||| | ||||   | || | |  ||||||||| |    
T  90018 gtgtaaa-tttgttttagtgcctgaggcagtaggttggtgtgcataaaaagcaaataacagaaaataagatagttttggaaaacacaaggagagagatga 89920  T
Q  412 gactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||  || |||||| |||| ||| ||||||||||||||||| ||||||| ||||    
T  89919 gatcaggtctttcgaatcatctaagttcccctaattggtatactgcacatatt 89867  T

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Target: scaffold0690 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 7596 - 7651
Alignment:
Q  327 ttttagtgcccgaggcagtaggtttgtgtgcataaaaagtaaataacataaaataa 382  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  7596 ttttagtgcccgaggcagtaggttggtgtgcataaaaagtaaataacagaaaataa 7651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 224058 - 223895
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| || | ||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  224058 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatctatgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 223961  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  223960 tgtaaattttata--agtgcctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 223895  T

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Target: scaffold0014; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 228984 - 228821
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||| | |||||| || ||||||||||||| | | ||||   ||||  |  || ||||    
T  228984 ttagcaagtgtactaaaa-ctatcgaagtaataaaat-aagttcgtatgcacgaggactgtgttaatctcaacttagcaataaagttaatatctaggatg 228887  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||| | |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  228886 tgtaaatttta--taagtgtctgaggcagtaggtttttgtgcaataaaaagtaaataacagaaaataa 228821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 7119 - 7189
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| || ||||||||| |||||||| || |||||||||||||    
T  7119 ttagcaagtgtactaaaa-ctatcgaagtaataaaaataagttcgtatccacgaggacggtgttaatctcaa 7189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 13956 - 13793
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||| || |||||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||     || ||||    
T  13956 ttagcaagtgtac-aagaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatg 13859  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||| | |||||||||||||||||||| ||||||||||||||||| |||||||    
T  13858 cgtaaatttta--taagtgtctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 13793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 27972 - 27809
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    ||||||||||||| || |||||||||||||||| ||| |||||||| |||||||| || ||||||||||||| | | ||||   ||||     || ||||    
T  27972 ttagcaagtgtac-aagaactatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatg 27875  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgc-ataaaaagtaaataacataaaataa 382  Q
     ||||| ||||  | |||| | |||||||||||||||||||| ||||||||||||||||| |||||||    
T  27874 cgtaaatttta--taagtgtctgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 27809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 382
Target Start/End: Complemental strand, 20406 - 20243
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaagtaaacaattgcgttatgaaataagatg 315  Q
    |||||||||||||||||| ||| |||||||||| ||| |||||| | |||||||| || ||||||||||||| | | ||||   ||||     || ||||    
T  20406 ttagcaagtgtactaaaa-ctaccgaagtaataaaat-aagttcatatccacgaggactgtgttaatctcaacttagcaataaagttaatttctaggatg 20309  T
Q  316 agtaaagtttattttagtgcccgaggcagtaggtttgtgtgca-taaaaagtaaataacataaaataa 382  Q
     ||||| |||||   |||||  ||||||||||||||||||||| |||||||||||||||| |||||||    
T  20308 tgtaaattttata--agtgcttgaggcagtaggtttgtgtgcaataaaaagtaaataacagaaaataa 20243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 2844 - 2773
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  2844 ttagcaagtgtactaaaaatgcatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0996 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0996
Description:

Target: scaffold0996; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 1693 - 1766
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaat---taagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||||||||||||| |||   ||||||||| ||||| || || |||||||||||||    
T  1693 ttagcaagtgtactaaaa-ctatcgaagtaataaaatttataagttcgtatccacaaggactgtgttaatctcaa 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 27468 - 27397
Alignment:
Q  216 ttagcaagtgtactaaaaact-atcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  27468 ttagcaagtgtactaaaaatgcatcgaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 27397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 6620 - 6555
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||| ||||||||||||| ||| || ||||| |||||||| || |||||||||||||    
T  6620 caagtgtactaaaaa-tatcgaagtaataaaataaa-ttcgtatccacgaggactgtgttaatctcaa 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Original strand, 67614 - 67679
Alignment:
Q  220 caagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||| |||| ||||||||| ||| |||||||| |||||||| || |||||||||||||    
T  67614 caagtgtactaaaa-ctatggaagtaataaaat-aagttcgtatccacgaggactgtgttaatctcaa 67679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 48183 - 48253
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||| |||| ||||||||| |  ||||||||| |||||||  || |||||||||||||    
T  48183 ttagcaagtgtactaaaa-ctattgaagtaataaatataagttcgtatccacgatgactgtgttaatctcaa 48253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 3059 - 3127
Alignment:
Q  216 ttagcaagtgtactaaaaactatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    ||||||||||||||||| |||||||||||| || || ||   ||||| ||||||| || |||||||||||||    
T  3059 ttagcaagtgtactaaatactatcgaagtagtaaaaata---tcgttcccacgaggactgtgttaatctcaa 3127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 465
Target Start/End: Complemental strand, 241645 - 241596
Alignment:
Q  416 agatctttcaaatcctctgagttcccctaattggtacactgcacctattt 465  Q
    ||||||||| |||| |||  |||||||||||||||| |||||||||||||    
T  241645 agatctttcgaatcatctatgttcccctaattggtatactgcacctattt 241596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 464
Target Start/End: Complemental strand, 330 - 282
Alignment:
Q  416 agatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    ||||||||| |||| |||  |||||||||||||||| ||||||||||||    
T  330 agatctttcgaatcatctatgttcccctaattggtatactgcacctatt 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 1314 - 1385
Alignment:
Q  216 ttagcaagtgtactaaaaa-ctatcgaagtaatacaattaagttcgtttccacgagtaccgtgttaatctcaa 287  Q
    |||||||||||||||||||   |||||||||||| || ||||||||| |||||||| ||  ||||||||||||    
T  1314 ttagcaagtgtactaaaaatgcatcgaagtaata-aaataagttcgtgtccacgaggactctgttaatctcaa 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 2966 - 3030
Alignment:
Q  400 agagagagattagactagatctttcaaatcctctgagttcccctaattggtacactgcacctatt 464  Q
    |||||||||| ||  ||| |||||| |||| |||  |||||||||||||||| ||||||||||||    
T  2966 agagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 3030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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