View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14318_high_13 (Length: 300)
Name: NF14318_high_13
Description: NF14318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14318_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 31454955 - 31454687
Alignment:
| Q |
18 |
aagattgtggtttaagatggttcaataatgcttcaactctttgtgaagatgggtgtattcttgttggcaaactaattgatcttaatggttgatgagtaga |
117 |
Q |
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| T |
31454955 |
aagattgtggtttaagatggttcaataatgcttcaactctttgtgaagatgggtgtattcttgttggcaaactaattgatcttaatggttgatgagtaga |
31454856 |
T |
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| Q |
118 |
tggtaacattgaaattgtttccatttttcttcttcttcttttgttgtttacttagaagtgcaataaaacaagggttaaatgttgcttgttttgcaattag |
217 |
Q |
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| T |
31454855 |
tggtaacattgaaattgtttccattttttttcttcttcttttgttgtttacttagaagtgcaataaaacaagggttaaatgttgcttgttttgcaattag |
31454756 |
T |
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| Q |
218 |
tgtttcttcaatctatttataggaatgtggtaaaagagaattatagaaatttaattatttgagtattat |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31454755 |
tgtttcttcaatctatttataggaatgtggtaaaagagaattatagaaatttaattatttgagtattat |
31454687 |
T |
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