View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14318_high_20 (Length: 247)
Name: NF14318_high_20
Description: NF14318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14318_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 4616755 - 4616528
Alignment:
| Q |
1 |
atgaataaatcgataacaaagttgcttcaatcttgtttcttagttcaatcttcaaccttgacttcctgaaaataaagtttctcagctttgtaaatagaga |
100 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
4616755 |
atgaataaattgataacaaagttgcttcaatcttgtttcttagttcaatcttcaaccttgacttcctgaaaataaagcttctcagctttgtaaatagaga |
4616656 |
T |
|
| Q |
101 |
aagcaaaatcacccaattcagggagtgttgtgtgcaatgcacagtcccaaacttgaacaccctgcgcgatgcgccggtgcttctgtgggatgcacacgag |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
4616655 |
aagcaaaatcacccaattcagggagtgttgtgtgcgatgcacagtcccaaacttgaacaccctgcgcgatgcgccggtgcttctgtgggatgcacatgag |
4616556 |
T |
|
| Q |
201 |
gcgggcctgtcctgtgttttcttcaact |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
4616555 |
gcgggcctgtcctgtgttttcttcaact |
4616528 |
T |
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