View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14318_high_21 (Length: 239)
Name: NF14318_high_21
Description: NF14318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14318_high_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 40939521 - 40939741
Alignment:
| Q |
19 |
ggtaggtggcaactaacttcaacatcaattgtgttattgttatgtaagaacacggaatctggttgacggcgtatttgacggcaaaattataattttttat |
118 |
Q |
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| T |
40939521 |
ggtaggtggcaactaacttcaacatcaattgtgttattgttatgtaagaacacagaatctggttgacggcgtatttgacggcaaaattgtaattctttat |
40939620 |
T |
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| Q |
119 |
aaacaaatcctaaattgtaatataaaattgggattttcttgcaattttatgtattaaaccatatattaaggatttaacaaataacacatatttattaaga |
218 |
Q |
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| T |
40939621 |
agacaaatcctaaattgtaatataaaattgggattttcttgcaattttatgtattaaaccatatattaaggatttaacaaataacacatatttattaaga |
40939720 |
T |
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| Q |
219 |
aaaagaaattttcaatacctt |
239 |
Q |
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| T |
40939721 |
aaaagaaattttcaatacctt |
40939741 |
T |
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