View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14318_high_24 (Length: 208)
Name: NF14318_high_24
Description: NF14318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14318_high_24 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 183; Significance: 3e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 17146229 - 17146411
Alignment:
| Q |
11 |
attatactcaaatagcctttagcaattgtgatttcttcacctggaaacattctatactcactttcagcttcataatctaaacactccaaatcaccagctg |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17146229 |
attatactcaaatagcctttagcaattgtgatttcttcacctggaaacattctatactcactttcagcttcataatctaaacactccaaatcaccagctg |
17146328 |
T |
|
| Q |
111 |
aagtataagtcctctcagtattctcatacattgcaaaaactgcttcttcaagcaatttcttgttccaatctccataacctttt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17146329 |
aagtataagtcctctcagtattctcatacattgcaaaaactgcttcttcaagcaatttcttgttccaatctccataacctttt |
17146411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University