View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14318_low_20 (Length: 256)
Name: NF14318_low_20
Description: NF14318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14318_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 47213 - 46978
Alignment:
| Q |
1 |
agaacaatacaaactcttatagtatcattctatttcaagaagagaccatctcaattgaggtttcaatgagatttaatttgtaatcatactattacttagt |
100 |
Q |
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| T |
47213 |
agaacaatacaaactcttatagtatcattctatttcaagaagagaccatctcaattgaggtttcaatgagatttaatttgtaatcatactattacttagt |
47114 |
T |
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| Q |
101 |
aaactactcttcaaagtcacgatcaatattcatagttatctaatatctagtgtattctatttgggaaccaagtgtggttcccaaagtaaacaaccaagtg |
200 |
Q |
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| T |
47113 |
aaactactcttcaaagtcacgatcaatattcatagttatctaatatctagtgtattctatttgggaaccaagtgtggttcccaaagtaaacaaccaagtg |
47014 |
T |
|
| Q |
201 |
tggttctgttcttcacaatcgcggatcttaagttat |
236 |
Q |
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||||||| ||||||||| | |||||||||||||||| |
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| T |
47013 |
tggttctcttcttcacagtggcggatcttaagttat |
46978 |
T |
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