View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1431_low_20 (Length: 263)
Name: NF1431_low_20
Description: NF1431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1431_low_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 15 - 263
Target Start/End: Complemental strand, 30687379 - 30687131
Alignment:
| Q |
15 |
gagaggatctagagagcaagaaaactgttatattctctagcatttagttgtaattatttgttgttgtcatcataattcataactataaaaggaggttatg |
114 |
Q |
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| T |
30687379 |
gagaggatctagagagctagaaaactgttatattctctagcatttggttgtaattatttgttgctgtcatcataattcataactataaaaggaggttatg |
30687280 |
T |
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| Q |
115 |
tactggcatatagtacatttgtacaactaatatagctattatctcaatagtcattttgtcaaaaacacttttcaaagcgatgtgggactttgatgaaaaa |
214 |
Q |
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| T |
30687279 |
tactggcatatagtacatttgtacaactaatatagctattatctcaatagtcattttgtcaaaaacacttttcgaagcgatgtgggactttgatgaaaaa |
30687180 |
T |
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| Q |
215 |
ttgtattcttgacaacttaagaatgtcgttctctcaaacaatatgaaat |
263 |
Q |
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| T |
30687179 |
tcgtattcttgacaacttaagaatgccgttctctcaaacaatatgaaat |
30687131 |
T |
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