View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1431_low_27 (Length: 232)
Name: NF1431_low_27
Description: NF1431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1431_low_27 |
 |  |
|
| [»] scaffold0011 (2 HSPs) |
 |  |  |
|
| [»] scaffold1948 (2 HSPs) |
 |  |  |
|
| [»] scaffold0176 (2 HSPs) |
 |  |  |
|
| [»] scaffold1260 (2 HSPs) |
 |  |  |
|
| [»] scaffold0607 (2 HSPs) |
 |  |  |
|
| [»] scaffold0414 (2 HSPs) |
 |  |  |
|
| [»] scaffold0249 (1 HSPs) |
 |  |  |
|
| [»] scaffold0015 (2 HSPs) |
 |  |  |
|
| [»] scaffold0056 (2 HSPs) |
 |  |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 25766634 - 25766737
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
25766634 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaacaactccatttcag |
25766733 |
T |
 |
| Q |
115 |
tgga |
118 |
Q |
| |
|
|||| |
|
|
| T |
25766734 |
tgga |
25766737 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 30053155 - 30053059
Alignment:
| Q |
17 |
atactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||| |||| |||| |
|
|
| T |
30053155 |
atacttaagcaagagtagcttctgatctaacacttcctttctcaatagcttgttctccctctcaagttatgcattcctttgcaaaagttccagttca |
30053059 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 25766778 - 25766838
Alignment:
| Q |
126 |
aaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacata |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| |
|
|
| T |
25766778 |
aaatctcttggatgcactccagcaggaatgaaatttgtttgatttctttctcttagacata |
25766838 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 4822630 - 4822733
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaa |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||| |
|
|
| T |
4822630 |
ttatactcaagcaaaagtagcttctgattgagaacttcctttctcaatcgcttgttctccctttcaagttttgcattcctttgcaatagctccatttcag |
4822729 |
T |
 |
| Q |
115 |
tgga |
118 |
Q |
| |
|
|||| |
|
|
| T |
4822730 |
tgga |
4822733 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 4822770 - 4822844
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacataagggagtttg |
196 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||| || |||||||||||||||||||||||||| | ||||||| |
|
|
| T |
4822770 |
atccaattctcttggatgcactccaacaggaatgaaatttgttggatttctttctcttagacataggagagtttg |
4822844 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 332943 - 332992
Alignment:
| Q |
69 |
ttctccctttcaagttctgcattcttttgcaaaagctccatttcaatgga |
118 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||| |||| |||| |
|
|
| T |
332943 |
ttctccctttcaagttctgcattcctttgcataagctccaattcagtgga |
332992 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 4427940 - 4427893
Alignment:
| Q |
66 |
ttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||| |||||||||||| |
|
|
| T |
4427940 |
ttgttctccctctcaagttctgcattcctttgcagcagctccatttca |
4427893 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 4427851 - 4427793
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctctta |
180 |
Q |
| |
|
||||||||| |||||||||||||| | || |||| |||||||||||||||| |||||| |
|
|
| T |
4427851 |
atccaaatcccttggatgcactccttctggtatgaaatctgttggatttcttcctctta |
4427793 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 134253 - 134159
Alignment:
| Q |
24 |
agcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaatgga |
118 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
134253 |
agcaagagtagcttctgatctagaacttcctttctcaattgcttgttctccctttcaagttctgcattcctttgcaaaagctccatttcagtgga |
134159 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 134122 - 134046
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacataagggagtttgca |
198 |
Q |
| |
|
|||||| ||||||||||||||| | || ||||||| |||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
134122 |
atccaattctcttggatgcacttctgctggaatgaaatctgttggatttctttctcttagacatgaaggagattgca |
134046 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1948 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold1948
Description:
Target: scaffold1948; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 654 - 757
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaa |
114 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||||| ||||||||||||| |
|
|
| T |
654 |
ttatattcaagcaagagtagcttatgattgagaacttcctttctcagttgcttgttctcccttccaagttctacattcctttgcaatagctccatttcaa |
753 |
T |
 |
| Q |
115 |
tgga |
118 |
Q |
| |
|
|||| |
|
|
| T |
754 |
tgga |
757 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1948; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 794 - 870
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacataagggagtttgca |
198 |
Q |
| |
|
|||||| ||||||||||| ||||| |||||||| || ||||||||||||||||||||||| || |||||||||| |
|
|
| T |
794 |
atccaattctcttggatgaactcccataggaatgaaatatgttggatttctttctcttagacttagaggagtttgca |
870 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 3597240 - 3597150
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgca-ttcttttgcaaaagc |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
3597240 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaactgcttgttctccctttcaagttctccatttcttttgcaaaagc |
3597150 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 19928266 - 19928369
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaa |
114 |
Q |
| |
|
||||| |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
19928266 |
ttatattcaagcaaaagtagcttttgattgagaacttcctttctcagttgcttggtctccctctcaagttcttcattcctttgcaatagctccatttcag |
19928365 |
T |
 |
| Q |
115 |
tgga |
118 |
Q |
| |
|
|||| |
|
|
| T |
19928366 |
tgga |
19928369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 22664319 - 22664409
Alignment:
| Q |
23 |
aagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
22664319 |
aagcatgagtagcttctgattgagaagttcctttctcagttgcttgttttccctttcaagttctacattcctttgcaaaagctccaattca |
22664409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 22664451 - 22664514
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacat |
185 |
Q |
| |
|
|||||| ||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
22664451 |
atccaattctcttggatgcactcctactggaatgaaatctgttggatttctttttcttagacat |
22664514 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0176 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0176
Description:
Target: scaffold0176; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 108
Target Start/End: Original strand, 10394 - 10481
Alignment:
| Q |
21 |
tcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctcca |
108 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10394 |
tcaagcatgagtagcttctaattgagaagttcctttctcagttgcttgttctccctttcaagttctgcattcctttgcaaaagctcca |
10481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 10535 - 10591
Alignment:
| Q |
129 |
tctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacat |
185 |
Q |
| |
|
||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
10535 |
tctcttggatgcactcctactggaatgaaatctattggatttctttctcttagacat |
10591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1260 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold1260
Description:
Target: scaffold1260; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 1666 - 1572
Alignment:
| Q |
24 |
agcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaatgga |
118 |
Q |
| |
|
||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| |
|
|
| T |
1666 |
agcaagagtagcttctgatctaaaacttcctttatcaattgcttgttctccctttcaagttcttcattcctttgcaaaagctccatttcagtgga |
1572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1260; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 1535 - 1472
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacat |
185 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
1535 |
atccaattctcttggatgcactcctgctggaatgaaatctattggatttctttctcttagacat |
1472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0607 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0607
Description:
Target: scaffold0607; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 8049 - 8141
Alignment:
| Q |
21 |
tcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||| ||| ||||||||||| |||| |
|
|
| T |
8049 |
tcaagcatgagtagcttctgattgagaagttcctttctcaactgcttgttccctctttcaagttctgcattcctttccaaaagctccaattca |
8141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0607; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 8183 - 8241
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctctta |
180 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||| |
|
|
| T |
8183 |
atccaaatctcttggatgcactcctactggaatgaaatctgttcgatttctttctctta |
8241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 16878520 - 16878612
Alignment:
| Q |
26 |
caagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaatgga |
118 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |
|
|
| T |
16878520 |
caagagtagcttctgatctagaacttcctttcttaaatgtttgttctccctttcaagttctgcattcctttgcaaaaactccatttcagtgga |
16878612 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 21626295 - 21626379
Alignment:
| Q |
15 |
ttatactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgca |
99 |
Q |
| |
|
|||||||||||||| ||||| ||||| | |||||||||||||| | | |||||| ||| ||||||||||||||||| |||||| |
|
|
| T |
21626295 |
ttatactcaagcaatagtaggttctgttcaagaacttcctttcttagcttcttgttttccttttcaagttctgcattcctttgca |
21626379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 16878649 - 16878711
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagaca |
184 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |
|
|
| T |
16878649 |
atccaattctcttggatgcactcctattggaatgaaatctgttggatttccttctcttagaca |
16878711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0414 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0414
Description:
Target: scaffold0414; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 6055 - 5963
Alignment:
| Q |
21 |
tcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||||| ||||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||| |||| ||||||||||||||| |||| |
|
|
| T |
6055 |
tcaagcatgagtagcttctgaatgagaagttcctttctcagctgcttgttttccctttcaagttctgtattcctttgcaaaagctccaattca |
5963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0414; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 5921 - 5862
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttag |
181 |
Q |
| |
|
|||||| || |||||||||||||| | ||||||| |||||||||||||||||||||||| |
|
|
| T |
5921 |
atccaattcccttggatgcactcctactggaatgaaatctgttggatttctttctcttag |
5862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0249 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 16623 - 16529
Alignment:
| Q |
24 |
agcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttcaatgga |
118 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||| |||| |||| |||| |
|
|
| T |
16623 |
agcaagagtagcttctgatctaacacttcctttctcagttgcttgttatccctttcaagttatgcattcctttgcaaaagttccaattcagtgga |
16529 |
T |
 |
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Target: scaffold0015 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 165164 - 165076
Alignment:
| Q |
24 |
agcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttc |
112 |
Q |
| |
|
|||||||| | |||||||| |||| ||||||| |||| ||||| || ||||||||||||||||||||| |||||| |||||| ||||| |
|
|
| T |
165164 |
agcaagagcatcttctgatgtagaagttcctttttcaactgcttcttttccctttcaagttctgcattcctttgcagaagctctatttc |
165076 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 181
Target Start/End: Complemental strand, 165033 - 164974
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttag |
181 |
Q |
| |
|
|||||| |||||||||||||||| | ||||||| |||||| ||||||||||||||||| |
|
|
| T |
165033 |
atccaattctcttggatgcactcttactggaatgaaatctgtgggatttctttctcttag |
164974 |
T |
 |
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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 33703 - 33607
Alignment:
| Q |
17 |
atactcaagcaagagtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgcaaaagctccatttca |
113 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| ||||| || |||||||||||| ||||||||||||||| |||||| ||| |||| |||| |
|
|
| T |
33703 |
atacttaagcaagagtagcttctgatctaacacttcttttcttaaagacttgttctccctctcaagttctgcattcctttgcagaagttccagttca |
33607 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 33565 - 33502
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctcttagacat |
185 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||| ||| |||||||||||| ||||||||||| |
|
|
| T |
33565 |
atccaaatcccttggatgcactccttctggaatgaaatcagttggatttcttcctcttagacat |
33502 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 21133840 - 21133782
Alignment:
| Q |
122 |
atccaaatctcttggatgcactccagcaggaatgagatctgttggatttctttctctta |
180 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||| |||||||||||||||| |||||| |
|
|
| T |
21133840 |
atccaaatcccttggatgcactccttctggaatgaaatctgttggatttcttcctctta |
21133782 |
T |
 |
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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 144304 - 144373
Alignment:
| Q |
30 |
agtagcttctgattgagaacttcctttctcaattgcttgttctccctttcaagttctgcattcttttgca |
99 |
Q |
| |
|
||||||||||| | |||||||||||||| | | |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
144304 |
agtagcttctgttcaagaacttcctttctaagcttcttgttttccttttcaagttctgcattcttttgca |
144373 |
T |
 |
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