View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1431_low_31 (Length: 210)
Name: NF1431_low_31
Description: NF1431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1431_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 33968948 - 33969137
Alignment:
| Q |
18 |
cacattctcatattccaaattaagccaatgggatctaaacattttcaaccatcaaaagatcgagtaccttccatttccaaaacaaacacatttaaacatt |
117 |
Q |
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| T |
33968948 |
cacattctcatattccaaattgagccaatgggatctaaacattttcaaccatcaaaagatcgagtaccttccatttccaaaacaaacacatttaaacatt |
33969047 |
T |
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| Q |
118 |
ttcaaccatagataagtatagtaaataagatgtgaaatatgctattttgatgagtcttatggttgccaaataagataactccctatgctt |
207 |
Q |
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| T |
33969048 |
ttcaaccatagataagtatagtaaataagatgtgaaatatgctattttgatgagtcttatggttgccaaataagataactccctatgctt |
33969137 |
T |
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