View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14320_low_9 (Length: 357)
Name: NF14320_low_9
Description: NF14320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14320_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 12 - 342
Target Start/End: Complemental strand, 37667253 - 37666927
Alignment:
| Q |
12 |
agcataggcaaccaaaatttttagagattttttattagggatagtattaaatgaagtttgaaaaggagatttatgttgcaatagaggtgtgatgactcta |
111 |
Q |
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| T |
37667253 |
agcataagcaaccaaaatttttagagattttttattagggatagtattaaatgaagtttgaaaaggagatttatgttgcaatagaggtgtgatgactcta |
37667154 |
T |
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| Q |
112 |
ttgattaagaacacaacattaataaacatatgatccaaatgacttaggtaatttggactgaaatataatggttcttcctacattgagaatttgttggtgt |
211 |
Q |
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| T |
37667153 |
ttgattaagaacacaacattaataaacatatgatccaaatgacttaggtaatttggactgaaatataatggttcttcctacattgagaatttgttggtgt |
37667054 |
T |
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| Q |
212 |
accattttgtcg-tggggtttctacacatgnnnnnnnnnnnnnnnnnnacgaatgatacatttagaagcataaatttttggaagagaaagcaccaggccg |
310 |
Q |
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| T |
37667053 |
accattttgtcgttggggtttctacacatg-----ttttattttttttacgaatgatacacttagaagcataaatttttggaagagaaagcaccaggccg |
37666959 |
T |
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| Q |
311 |
ttattagatttgatagttttgagagtattgtg |
342 |
Q |
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| T |
37666958 |
ttattagatttgatagttttgggagtattgtg |
37666927 |
T |
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