View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14321_low_5 (Length: 553)
Name: NF14321_low_5
Description: NF14321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14321_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 17991810 - 17991705
Alignment:
| Q |
17 |
taggactacctaaactat-gcaatattgaaatggcagcacaataaatcaatacaacaacatgcatgcagagcgtccaattaaatataatcaaggacaagg |
115 |
Q |
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| T |
17991810 |
taggactacctaaactaaagcaatattgaattggcagcacaataaatcaatacaacaacatgcatgcagagcatccaattaaatataatcaaggacaagg |
17991711 |
T |
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| Q |
116 |
gtggac |
121 |
Q |
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|||||| |
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| T |
17991710 |
gtggac |
17991705 |
T |
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