View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14323_high_30 (Length: 335)
Name: NF14323_high_30
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14323_high_30 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 32285506 - 32285185
Alignment:
| Q |
1 |
ttcaacttgtatgatgatgtatttctctttttataagatgttataaataatcatatattttttatgtgagacttgagtttttccaaggcaaa-cgggtta |
99 |
Q |
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| T |
32285506 |
ttcaacttgtatggtgatgtatgtctctttttata-gatgttataaagagtcatatattttttatgtgagacttgagtttttccatgggaaaactggtta |
32285408 |
T |
|
| Q |
100 |
actcgttcccca----cctgtctaaaacagtagcagaaaagaatgaaatttatcattatttatcagacaggccaacctgcacacctcgttataaccattc |
195 |
Q |
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|||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||| || ||||||||| |||||||||||||| ||||||| |
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| T |
32285407 |
actcgttccccattaacctgtctaaaatagtagcggaaaagaatggaatttatcattatttatccgataggccaacccgcacacctcgttatgaccattc |
32285308 |
T |
|
| Q |
196 |
catttttagcagattaattaaatggacggaccacttagaagtggtaggttcaaaatcttaacctatcccacaaaaaataacggttaaacggtccgttcca |
295 |
Q |
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||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
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| T |
32285307 |
catttttagcagattgattaaatgggcgaaccacttagaagtggtaggttcaaaatcttaacctatcccacaaaaaataacggctaaacggtccgatcca |
32285208 |
T |
|
| Q |
296 |
acaaattcaacccattttactat |
318 |
Q |
| |
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||||| ||||||||||||||||| |
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|
| T |
32285207 |
acaaactcaacccattttactat |
32285185 |
T |
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