View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14323_low_13 (Length: 477)
Name: NF14323_low_13
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14323_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 10 - 454
Target Start/End: Original strand, 41110242 - 41110687
Alignment:
| Q |
10 |
tcatcaacactacaaagtggtgacattcatttcgtcttggctaacacataatttcattctcgtgtcgagtacacatgccaattccaattcagttgttagc |
109 |
Q |
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| T |
41110242 |
tcatcaacactacaaagtggtgacatccatttcgtcttggctaacacataattgcattttcgtgtcgagtacacatgccaattccaatccagttgttagc |
41110341 |
T |
|
| Q |
110 |
catatgaaaagaatcactaatgttgcatttgaaccaatttgtggaaggtttttgccactgaaaaaacaaccctttcactgtgtggacttgatatgttgtt |
209 |
Q |
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| T |
41110342 |
catatgaaaagaatcactaatgttgcatttgaaccaatttgtggaaggtttttgccactgaaaaaacaacccttacactgtgtggacttgatatgttgtt |
41110441 |
T |
|
| Q |
210 |
accaacaacttgttgtgccaa-ttttaatctatttgaaaatgtaaattgtgcaccacaacctgttgcaatatttattgcatattgtctcaaaccttctcg |
308 |
Q |
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||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
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| T |
41110442 |
accaacaacttgttgtgccaatttttgatctatttgaaaatgcaaattgtgcaccacaacctattgcaatatttattgcatattgtctcaaaacttctcg |
41110541 |
T |
|
| Q |
309 |
ttcctttgtttccaaatgctctgaaaagtaactgcaaaaacaacatttgtgtcaacattaacaaaaccaaaaactgcacaaatagaagattgtatttgta |
408 |
Q |
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|||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |
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| T |
41110542 |
ttcctttgtttccaaatgctctgagaagtaattgcaaaaacaacatttgtgtcaacattaacaaaaccaaaaaatgcacaaatagaagattgtattagta |
41110641 |
T |
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| Q |
409 |
ccgctgcaaccgtcaagagaggctatagcaatcccataaatatata |
454 |
Q |
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| T |
41110642 |
ccgctgcaactgtcaagagaggctgtagcaatcccagaaatatata |
41110687 |
T |
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