View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14323_low_15 (Length: 468)

Name: NF14323_low_15
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14323_low_15
NF14323_low_15
[»] chr7 (61 HSPs)
chr7 (224-377)||(44343714-44343867)
chr7 (78-221)||(44343901-44344046)
chr7 (14-74)||(24394975-24395035)
chr7 (12-79)||(15577850-15577917)
chr7 (12-74)||(3961982-3962044)
chr7 (12-74)||(4974735-4974797)
chr7 (12-74)||(34482838-34482900)
chr7 (12-74)||(42611814-42611876)
chr7 (12-74)||(45637715-45637777)
chr7 (13-77)||(36790467-36790531)
chr7 (12-74)||(15329276-15329338)
chr7 (12-74)||(25167850-25167912)
chr7 (12-74)||(37477080-37477142)
chr7 (12-74)||(48880927-48880989)
chr7 (12-80)||(35444555-35444623)
chr7 (327-455)||(4267821-4267951)
chr7 (12-79)||(18036976-18037043)
chr7 (12-73)||(29737143-29737204)
chr7 (327-443)||(2544216-2544332)
chr7 (326-453)||(17202145-17202272)
chr7 (328-439)||(44874351-44874462)
chr7 (327-453)||(29469572-29469698)
chr7 (374-456)||(44342917-44342998)
chr7 (360-453)||(2544438-2544531)
chr7 (360-453)||(25620136-25620229)
chr7 (326-458)||(31257253-31257385)
chr7 (327-446)||(3038082-3038201)
chr7 (360-451)||(34027393-34027484)
chr7 (327-446)||(47710410-47710529)
chr7 (327-446)||(47722066-47722185)
chr7 (327-445)||(48243060-48243176)
chr7 (326-445)||(5522845-5522966)
chr7 (12-74)||(15238385-15238447)
chr7 (24-74)||(20010109-20010159)
chr7 (327-445)||(34027594-34027712)
chr7 (12-49)||(30848597-30848634)
chr7 (360-453)||(48243428-48243521)
chr7 (329-453)||(21821775-21821899)
chr7 (326-453)||(2404399-2404526)
chr7 (324-439)||(31257036-31257151)
chr7 (327-445)||(6634822-6634940)
chr7 (327-453)||(21861261-21861387)
chr7 (12-74)||(42696086-42696148)
chr7 (327-444)||(6001435-6001552)
chr7 (326-446)||(21054951-21055071)
chr7 (327-439)||(29469807-29469919)
chr7 (372-447)||(1596840-1596915)
chr7 (414-453)||(4886383-4886422)
chr7 (383-458)||(6782884-6782959)
chr7 (414-453)||(10882230-10882269)
chr7 (414-453)||(40121915-40121954)
chr7 (326-393)||(41190980-41191047)
chr7 (326-393)||(42985174-42985241)
chr7 (327-453)||(26562064-26562190)
chr7 (415-453)||(33996302-33996340)
chr7 (360-445)||(21861529-21861614)
chr7 (12-73)||(25167655-25167715)
chr7 (327-440)||(31485429-31485541)
chr7 (12-73)||(48880726-48880786)
chr7 (419-455)||(2401204-2401240)
chr7 (327-446)||(4268021-4268141)
[»] chr2 (51 HSPs)
chr2 (12-82)||(35160752-35160822)
chr2 (12-74)||(10661890-10661952)
chr2 (327-453)||(2324207-2324333)
chr2 (12-74)||(9293576-9293638)
chr2 (12-74)||(21936084-21936146)
chr2 (12-74)||(23268062-23268124)
chr2 (327-445)||(25082536-25082654)
chr2 (12-78)||(31174834-31174900)
chr2 (12-74)||(33380210-33380272)
chr2 (327-453)||(14466401-14466527)
chr2 (13-74)||(13354849-13354910)
chr2 (12-80)||(14941366-14941434)
chr2 (12-79)||(7475508-7475575)
chr2 (326-452)||(15464735-15464861)
chr2 (327-445)||(16419469-16419587)
chr2 (326-456)||(17719366-17719496)
chr2 (12-74)||(21393688-21393750)
chr2 (327-453)||(40379435-40379561)
chr2 (12-74)||(43330915-43330977)
chr2 (326-439)||(8424854-8424967)
chr2 (326-453)||(15124774-15124902)
chr2 (362-453)||(28407784-28407875)
chr2 (12-74)||(9723408-9723470)
chr2 (327-453)||(29718295-29718421)
chr2 (12-49)||(3989104-3989141)
chr2 (327-439)||(36316056-36316168)
chr2 (327-443)||(37769944-37770060)
chr2 (414-453)||(93345-93384)
chr2 (326-453)||(2029735-2029862)
chr2 (327-445)||(5711438-5711556)
chr2 (327-445)||(40379208-40379326)
chr2 (324-453)||(5509043-5509172)
chr2 (12-73)||(23267861-23267921)
chr2 (327-456)||(27897594-27897722)
chr2 (327-443)||(1926442-1926558)
chr2 (414-453)||(93618-93657)
chr2 (360-439)||(2324474-2324553)
chr2 (331-446)||(14927073-14927188)
chr2 (383-453)||(10570993-10571063)
chr2 (12-74)||(27847635-27847697)
chr2 (327-437)||(32884074-32884184)
chr2 (12-65)||(9723612-9723665)
chr2 (372-445)||(17719578-17719651)
chr2 (12-65)||(22591494-22591547)
chr2 (12-73)||(22592918-22592979)
chr2 (12-73)||(33380413-33380473)
chr2 (12-73)||(35160965-35161025)
chr2 (326-451)||(37840303-37840428)
chr2 (40-77)||(40262714-40262751)
chr2 (327-443)||(5509280-5509396)
chr2 (331-391)||(11099656-11099716)
[»] chr1 (52 HSPs)
chr1 (12-83)||(3559611-3559682)
chr1 (12-74)||(18404445-18404507)
chr1 (12-74)||(25463679-25463741)
chr1 (12-74)||(40214991-40215053)
chr1 (12-73)||(16045798-16045859)
chr1 (12-79)||(41876442-41876509)
chr1 (12-74)||(9910293-9910355)
chr1 (12-74)||(44094701-44094763)
chr1 (12-74)||(19015407-19015469)
chr1 (12-74)||(36966708-36966770)
chr1 (12-74)||(37821834-37821896)
chr1 (327-445)||(42586438-42586555)
chr1 (327-446)||(4098161-4098280)
chr1 (326-457)||(51588958-51589089)
chr1 (327-453)||(3169733-3169859)
chr1 (327-453)||(4098394-4098519)
chr1 (12-74)||(6883490-6883552)
chr1 (339-453)||(39348344-39348457)
chr1 (360-452)||(4112998-4113090)
chr1 (14-74)||(32000269-32000329)
chr1 (327-458)||(51589193-51589324)
chr1 (325-451)||(17452821-17452947)
chr1 (12-74)||(25973417-25973478)
chr1 (327-453)||(30369802-30369928)
chr1 (326-443)||(11924887-11925004)
chr1 (327-446)||(25145483-25145602)
chr1 (327-446)||(35772231-35772350)
chr1 (12-83)||(27523255-27523328)
chr1 (12-74)||(40273705-40273767)
chr1 (12-78)||(44690815-44690881)
chr1 (15-73)||(52064376-52064434)
chr1 (334-439)||(17452684-17452789)
chr1 (372-445)||(26177155-26177228)
chr1 (360-445)||(40079152-40079237)
chr1 (360-453)||(51589806-51589899)
chr1 (327-439)||(51590007-51590117)
chr1 (327-451)||(2859620-2859744)
chr1 (383-451)||(33156756-33156824)
chr1 (327-439)||(38080572-38080683)
chr1 (414-453)||(17402636-17402675)
chr1 (327-446)||(25713360-25713479)
chr1 (327-434)||(26173466-26173573)
chr1 (414-453)||(29266007-29266046)
chr1 (414-453)||(35772083-35772122)
chr1 (419-453)||(23436566-23436600)
chr1 (327-453)||(35892258-35892384)
chr1 (12-73)||(18404654-18404714)
chr1 (12-73)||(19015610-19015670)
chr1 (327-400)||(38668327-38668400)
chr1 (12-73)||(51737711-51737771)
chr1 (331-395)||(21626388-21626452)
chr1 (40-80)||(34519755-34519795)
[»] chr8 (77 HSPs)
chr8 (12-74)||(32393861-32393923)
chr8 (12-74)||(1645965-1646027)
chr8 (12-74)||(14128867-14128929)
chr8 (12-74)||(32064748-32064810)
chr8 (12-74)||(34665385-34665447)
chr8 (12-74)||(35353044-35353106)
chr8 (12-74)||(37132658-37132720)
chr8 (12-73)||(37986055-37986116)
chr8 (12-74)||(17841850-17841912)
chr8 (12-74)||(20091801-20091863)
chr8 (12-74)||(24211553-24211615)
chr8 (12-74)||(40780129-40780191)
chr8 (12-74)||(42755042-42755104)
chr8 (13-74)||(15187563-15187624)
chr8 (12-69)||(38016979-38017036)
chr8 (12-74)||(6108233-6108295)
chr8 (327-453)||(11232420-11232546)
chr8 (12-74)||(26042116-26042178)
chr8 (324-453)||(5590359-5590488)
chr8 (12-77)||(8453834-8453899)
chr8 (12-80)||(41819778-41819846)
chr8 (326-453)||(24532412-24532539)
chr8 (327-453)||(11232185-11232311)
chr8 (327-453)||(20301228-20301354)
chr8 (327-453)||(21087860-21087986)
chr8 (12-74)||(31347782-31347844)
chr8 (12-74)||(39772801-39772863)
chr8 (326-451)||(39052922-39053047)
chr8 (12-74)||(7017865-7017927)
chr8 (327-453)||(17469785-17469911)
chr8 (327-453)||(19256811-19256937)
chr8 (331-445)||(22638178-22638292)
chr8 (12-74)||(27782117-27782179)
chr8 (327-453)||(36917430-36917556)
chr8 (327-439)||(19256591-19256703)
chr8 (12-72)||(25581239-25581299)
chr8 (327-439)||(39743496-39743608)
chr8 (362-453)||(5932175-5932266)
chr8 (12-67)||(7021988-7022043)
chr8 (326-445)||(10449966-10450085)
chr8 (327-445)||(39960158-39960277)
chr8 (327-445)||(42846604-42846723)
chr8 (327-445)||(5931948-5932066)
chr8 (331-453)||(6462930-6463051)
chr8 (12-74)||(27835453-27835515)
chr8 (12-74)||(30835047-30835108)
chr8 (12-73)||(3890413-3890474)
chr8 (360-453)||(4828068-4828161)
chr8 (325-453)||(20094786-20094916)
chr8 (326-439)||(24075311-24075424)
chr8 (328-425)||(39984782-39984879)
chr8 (327-439)||(7267470-7267582)
chr8 (327-439)||(17477032-17477144)
chr8 (360-439)||(4828293-4828372)
chr8 (414-453)||(10884118-10884157)
chr8 (326-453)||(12317012-12317139)
chr8 (331-434)||(36907438-36907541)
chr8 (372-451)||(38475759-38475838)
chr8 (414-453)||(41790712-41790751)
chr8 (329-438)||(8715871-8715981)
chr8 (331-393)||(29907777-29907839)
chr8 (339-393)||(34236699-34236753)
chr8 (12-73)||(1503642-1503702)
chr8 (12-73)||(3596840-3596900)
chr8 (12-49)||(3890616-3890653)
chr8 (12-73)||(17841649-17841709)
chr8 (12-65)||(24844667-24844720)
chr8 (12-73)||(26041912-26041972)
chr8 (12-73)||(32064952-32065012)
chr8 (360-445)||(35682780-35682865)
chr8 (416-453)||(37868574-37868611)
chr8 (12-73)||(40779928-40779988)
chr8 (12-73)||(42754841-42754901)
chr8 (327-439)||(422222-422334)
chr8 (13-49)||(3597042-3597078)
chr8 (327-423)||(34843084-34843180)
chr8 (372-432)||(45031373-45031433)
[»] chr6 (48 HSPs)
chr6 (12-74)||(6127278-6127340)
chr6 (12-74)||(23291084-23291146)
chr6 (12-74)||(17705465-17705527)
chr6 (12-74)||(33695327-33695389)
chr6 (12-74)||(33696699-33696761)
chr6 (12-74)||(18365573-18365635)
chr6 (12-74)||(18370837-18370899)
chr6 (12-76)||(8515725-8515789)
chr6 (325-453)||(33494504-33494632)
chr6 (327-446)||(6542707-6542825)
chr6 (12-74)||(6031741-6031803)
chr6 (12-74)||(17176021-17176083)
chr6 (12-74)||(25986933-25986995)
chr6 (12-74)||(28675151-28675213)
chr6 (327-453)||(30256545-30256671)
chr6 (13-74)||(18889698-18889758)
chr6 (326-453)||(33796292-33796419)
chr6 (327-453)||(9704987-9705113)
chr6 (327-453)||(13353168-13353294)
chr6 (360-453)||(8026389-8026482)
chr6 (325-453)||(4868804-4868932)
chr6 (13-73)||(29693652-29693712)
chr6 (12-71)||(11548588-11548647)
chr6 (327-445)||(6054370-6054488)
chr6 (327-453)||(6542934-6543060)
chr6 (326-439)||(8566964-8567076)
chr6 (330-447)||(11721875-11721992)
chr6 (360-445)||(13740916-13741001)
chr6 (360-445)||(13746416-13746501)
chr6 (360-457)||(21690722-21690819)
chr6 (329-445)||(25065093-25065209)
chr6 (326-453)||(3679978-3680105)
chr6 (12-74)||(2309423-2309485)
chr6 (327-445)||(4868576-4868694)
chr6 (327-445)||(9705221-9705339)
chr6 (360-458)||(30256813-30256910)
chr6 (12-66)||(32702216-32702270)
chr6 (360-453)||(12330170-12330263)
chr6 (327-439)||(5572389-5572501)
chr6 (425-457)||(6400841-6400873)
chr6 (327-439)||(12330296-12330407)
chr6 (414-453)||(20373624-20373663)
chr6 (327-453)||(27653184-27653310)
chr6 (360-450)||(27772714-27772804)
chr6 (324-409)||(15600900-15600985)
chr6 (12-73)||(33696903-33696963)
chr6 (327-403)||(24554317-24554392)
chr6 (327-439)||(27656425-27656537)
[»] chr5 (53 HSPs)
chr5 (12-74)||(2477639-2477701)
chr5 (12-74)||(11361131-11361193)
chr5 (12-74)||(4892205-4892267)
chr5 (12-74)||(25398241-25398303)
chr5 (12-74)||(33584329-33584391)
chr5 (14-81)||(3362774-3362841)
chr5 (12-74)||(37321793-37321856)
chr5 (12-74)||(6043511-6043573)
chr5 (14-80)||(38899728-38899794)
chr5 (12-73)||(8145379-8145440)
chr5 (12-74)||(14138671-14138733)
chr5 (12-74)||(22913054-22913116)
chr5 (339-452)||(13296652-13296764)
chr5 (14-74)||(12850804-12850864)
chr5 (326-457)||(6413644-6413774)
chr5 (326-457)||(6919416-6919545)
chr5 (326-453)||(8098284-8098410)
chr5 (331-453)||(1564558-1564680)
chr5 (12-74)||(3522006-3522068)
chr5 (12-74)||(4434007-4434069)
chr5 (327-453)||(24487636-24487762)
chr5 (327-453)||(41666984-41667110)
chr5 (326-453)||(2063725-2063851)
chr5 (12-74)||(17545685-17545747)
chr5 (326-451)||(21209914-21210039)
chr5 (360-453)||(24528540-24528633)
chr5 (360-453)||(24531599-24531692)
chr5 (333-453)||(15480295-15480415)
chr5 (327-439)||(27132998-27133110)
chr5 (326-453)||(24346728-24346855)
chr5 (12-74)||(12614733-12614795)
chr5 (327-445)||(19705870-19705988)
chr5 (327-445)||(41666756-41666874)
chr5 (12-73)||(3521806-3521866)
chr5 (12-73)||(6043311-6043371)
chr5 (12-65)||(10458409-10458462)
chr5 (326-451)||(42295545-42295670)
chr5 (327-443)||(6637804-6637920)
chr5 (327-453)||(8081104-8081231)
chr5 (327-446)||(13296859-13296978)
chr5 (360-447)||(15438987-15439074)
chr5 (22-73)||(27481830-27481881)
chr5 (327-453)||(9368562-9368688)
chr5 (327-445)||(12034657-12034775)
chr5 (327-445)||(20510641-20510759)
chr5 (12-73)||(4892408-4892468)
chr5 (12-73)||(12614536-12614597)
chr5 (325-378)||(16704014-16704067)
chr5 (12-73)||(33584128-33584188)
chr5 (414-453)||(6637655-6637695)
chr5 (414-458)||(25258287-25258331)
chr5 (414-458)||(25322077-25322121)
chr5 (383-447)||(43117905-43117969)
[»] chr4 (76 HSPs)
chr4 (12-74)||(7745112-7745174)
chr4 (12-79)||(31078819-31078886)
chr4 (12-74)||(10442789-10442851)
chr4 (12-74)||(22199264-22199326)
chr4 (12-82)||(33530688-33530758)
chr4 (12-74)||(49387888-49387950)
chr4 (14-74)||(36072950-36073010)
chr4 (12-74)||(2624840-2624902)
chr4 (12-74)||(21802322-21802384)
chr4 (12-74)||(23964465-23964527)
chr4 (12-74)||(24128242-24128304)
chr4 (327-453)||(35788626-35788752)
chr4 (12-74)||(47290069-47290131)
chr4 (12-74)||(50156578-50156640)
chr4 (12-73)||(36073354-36073415)
chr4 (326-458)||(400551-400683)
chr4 (14-74)||(4751449-4751509)
chr4 (12-71)||(42671675-42671734)
chr4 (12-74)||(24392670-24392732)
chr4 (12-74)||(44893429-44893491)
chr4 (360-453)||(35796968-35797061)
chr4 (326-453)||(35819119-35819246)
chr4 (15-74)||(37934944-37935003)
chr4 (12-74)||(53123033-53123096)
chr4 (12-74)||(46441847-46441909)
chr4 (326-455)||(5846112-5846241)
chr4 (360-453)||(53814920-53815013)
chr4 (327-458)||(21498321-21498452)
chr4 (327-430)||(35645779-35645882)
chr4 (327-458)||(50543316-50543447)
chr4 (327-445)||(22845446-22845564)
chr4 (327-453)||(50543558-50543684)
chr4 (360-453)||(1518164-1518257)
chr4 (372-453)||(22231299-22231380)
chr4 (12-65)||(37219837-37219890)
chr4 (12-80)||(44893213-44893282)
chr4 (327-439)||(21498762-21498874)
chr4 (327-439)||(28245531-28245643)
chr4 (360-451)||(30566027-30566118)
chr4 (414-453)||(52827476-52827515)
chr4 (383-453)||(17111586-17111656)
chr4 (327-445)||(21684965-21685083)
chr4 (331-445)||(22827509-22827623)
chr4 (327-445)||(22863441-22863559)
chr4 (12-49)||(9088898-9088935)
chr4 (362-439)||(9685634-9685711)
chr4 (360-453)||(25052852-25052945)
chr4 (12-73)||(25063373-25063434)
chr4 (364-453)||(40717432-40717521)
chr4 (12-73)||(44893012-44893072)
chr4 (12-73)||(44893632-44893692)
chr4 (362-453)||(9685400-9685491)
chr4 (414-453)||(12869254-12869293)
chr4 (360-439)||(16066065-16066144)
chr4 (327-446)||(18528215-18528334)
chr4 (419-458)||(33107929-33107968)
chr4 (14-73)||(36073159-36073217)
chr4 (331-453)||(6218175-6218297)
chr4 (327-453)||(14783178-14783304)
chr4 (327-453)||(18528448-18528574)
chr4 (327-409)||(31254442-31254524)
chr4 (327-445)||(35788861-35788979)
chr4 (327-445)||(39902562-39902680)
chr4 (12-73)||(9089076-9089136)
chr4 (12-45)||(17655462-17655495)
chr4 (13-78)||(24128446-24128510)
chr4 (360-445)||(35796741-35796826)
chr4 (12-73)||(36073555-36073615)
chr4 (372-453)||(37836092-37836173)
chr4 (12-73)||(46442050-46442110)
chr4 (12-73)||(53123237-53123297)
chr4 (13-73)||(17655637-17655697)
chr4 (327-439)||(20821940-20822052)
chr4 (397-453)||(21750268-21750324)
chr4 (13-73)||(36073260-36073320)
chr4 (12-64)||(36073743-36073795)
[»] chr3 (72 HSPs)
chr3 (12-74)||(2754720-2754782)
chr3 (12-74)||(3574527-3574589)
chr3 (12-74)||(37217053-37217115)
chr3 (13-74)||(11347271-11347332)
chr3 (12-74)||(3456067-3456129)
chr3 (12-74)||(48160908-48160970)
chr3 (12-74)||(6041887-6041949)
chr3 (12-74)||(19650900-19650962)
chr3 (324-453)||(22729064-22729193)
chr3 (23-80)||(42297350-42297407)
chr3 (326-453)||(11589751-11589878)
chr3 (12-79)||(22426344-22426411)
chr3 (12-74)||(3137414-3137476)
chr3 (12-74)||(8320584-8320646)
chr3 (12-74)||(30385014-30385076)
chr3 (12-74)||(33113796-33113858)
chr3 (12-74)||(33145716-33145777)
chr3 (12-74)||(37522056-37522118)
chr3 (360-453)||(1723067-1723160)
chr3 (327-451)||(23708217-23708341)
chr3 (327-451)||(23726673-23726797)
chr3 (327-451)||(23745129-23745253)
chr3 (12-74)||(9797029-9797091)
chr3 (327-453)||(16239558-16239684)
chr3 (331-453)||(30179699-30179821)
chr3 (12-74)||(34482910-34482972)
chr3 (12-74)||(36865027-36865089)
chr3 (325-453)||(20327840-20327968)
chr3 (23-66)||(42921154-42921197)
chr3 (327-457)||(12930115-12930245)
chr3 (14-68)||(26612794-26612848)
chr3 (327-453)||(35038419-35038545)
chr3 (327-453)||(54368483-54368609)
chr3 (360-453)||(54567892-54567985)
chr3 (339-451)||(24063654-24063766)
chr3 (326-453)||(16926940-16927067)
chr3 (327-453)||(9272928-9273054)
chr3 (327-449)||(31317196-31317317)
chr3 (12-74)||(33839534-33839596)
chr3 (327-445)||(35038193-35038311)
chr3 (372-453)||(4155336-4155417)
chr3 (360-445)||(4155559-4155644)
chr3 (372-457)||(13574908-13574993)
chr3 (326-423)||(14839758-14839855)
chr3 (12-73)||(37522259-37522319)
chr3 (372-445)||(42420836-42420909)
chr3 (372-453)||(45828031-45828112)
chr3 (327-443)||(9273162-9273278)
chr3 (327-447)||(20303061-20303181)
chr3 (327-443)||(20327615-20327731)
chr3 (339-451)||(23691417-23691529)
chr3 (13-65)||(47738117-47738169)
chr3 (360-451)||(17638235-17638325)
chr3 (327-446)||(39620293-39620412)
chr3 (16-71)||(41224239-41224294)
chr3 (334-453)||(45138962-45139081)
chr3 (364-446)||(8018972-8019054)
chr3 (12-74)||(8362045-8362107)
chr3 (360-445)||(17638408-17638490)
chr3 (12-74)||(24343550-24343612)
chr3 (40-74)||(40327878-40327912)
chr3 (20-78)||(42921339-42921397)
chr3 (12-73)||(3137213-3137273)
chr3 (326-443)||(6487334-6487451)
chr3 (12-73)||(34482687-34482747)
chr3 (360-453)||(39269331-39269424)
chr3 (12-73)||(40328037-40328098)
chr3 (12-49)||(41883223-41883260)
chr3 (12-65)||(47738317-47738370)
chr3 (414-458)||(21833402-21833446)
chr3 (12-68)||(33839741-33839797)
chr3 (383-439)||(50052544-50052600)
[»] scaffold0204 (2 HSPs)
scaffold0204 (12-83)||(4390-4461)
scaffold0204 (12-73)||(4602-4662)
[»] scaffold0665 (1 HSPs)
scaffold0665 (12-74)||(3071-3133)
[»] scaffold0766 (1 HSPs)
scaffold0766 (327-439)||(6241-6353)
[»] scaffold0471 (2 HSPs)
scaffold0471 (12-74)||(12845-12907)
scaffold0471 (13-78)||(13049-13113)
[»] scaffold0178 (2 HSPs)
scaffold0178 (12-74)||(11624-11686)
scaffold0178 (12-65)||(11827-11879)
[»] scaffold0096 (1 HSPs)
scaffold0096 (12-74)||(41014-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (12-74)||(47853-47915)
[»] scaffold0692 (2 HSPs)
scaffold0692 (328-453)||(5745-5870)
scaffold0692 (357-433)||(5555-5631)
[»] scaffold0519 (2 HSPs)
scaffold0519 (327-453)||(1883-2009)
scaffold0519 (327-445)||(2118-2236)
[»] scaffold0228 (5 HSPs)
scaffold0228 (12-66)||(8413-8467)
scaffold0228 (12-66)||(15995-16049)
scaffold0228 (12-66)||(25947-26001)
scaffold0228 (12-73)||(16190-16250)
scaffold0228 (12-73)||(26142-26202)
[»] scaffold0092 (1 HSPs)
scaffold0092 (321-453)||(5616-5748)
[»] scaffold0181 (1 HSPs)
scaffold0181 (323-445)||(20902-21024)
[»] scaffold0083 (1 HSPs)
scaffold0083 (357-453)||(51233-51329)
[»] scaffold0048 (2 HSPs)
scaffold0048 (414-453)||(81896-81935)
scaffold0048 (327-445)||(82043-82161)
[»] scaffold0047 (1 HSPs)
scaffold0047 (328-451)||(12615-12738)
[»] scaffold0129 (1 HSPs)
scaffold0129 (339-453)||(14282-14396)
[»] scaffold0005 (1 HSPs)
scaffold0005 (327-453)||(56426-56552)
[»] scaffold0027 (1 HSPs)
scaffold0027 (416-445)||(121610-121639)
[»] scaffold0334 (1 HSPs)
scaffold0334 (327-439)||(4434-4546)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 2e-74; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 224 - 377
Target Start/End: Complemental strand, 44343867 - 44343714
Alignment:
Q  224 atgcaaaattatagcatatatttataaccagaaatatataataaattgtgtatctttaagatcacatagatggctaatgaaatcgcacatatgagagaat 323  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44343867 atgcaaaattatagcatatatttataacaagaaatatataataaattgtgtatctttaagattacatagatggctaatgaaatcgcacatatgagagaat 44343768  T
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataag 377  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44343767 tgttgttaagagtctcacatcagataagagatagtttgacaatgtgtctataag 44343714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 44344046 - 44343901
Alignment:
Q  78 tataatgaaaccacataactctgnnnnnnngcaaaaagctcacacaca--ttactgcgcctcaaaatatctaatgtcccctacttgttcgtatgtccatt 175  Q
    |||||||||||||||||||||||       ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44344046 tataatgaaaccacataactctgtttttttgcaaaaagctcacacacacattactgcgcctcaaaatatctaatgtcccctacttgttcgtatgtgcatt 44343947  T
Q  176 aatgttttgataccaattgatgaatttaattataattatagatgca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44343946 aatgttttgataccaattgatgaatttaattataattatagatgca 44343901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 24395035 - 24394975
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24395035 ttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 24394975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 15577850 - 15577917
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  15577850 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcta 15577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3962044 - 3961982
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3962044 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 3961982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 4974735 - 4974797
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  4974735 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 4974797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 34482900 - 34482838
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34482900 gattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattg 34482838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 42611876 - 42611814
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  42611876 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 42611814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 45637777 - 45637715
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  45637777 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 45637715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 36790467 - 36790531
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttc 77  Q
    ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  36790467 attattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcattgttc 36790531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15329338 - 15329276
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15329338 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 15329276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 25167850 - 25167912
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  25167850 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattg 25167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37477080 - 37477142
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  37477080 gattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattg 37477142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 48880927 - 48880989
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  48880927 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 48880989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 35444623 - 35444555
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| || ||||||||||||| |||||    
T  35444623 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctctat 35444555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 455
Target Start/End: Original strand, 4267821 - 4267951
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatgg--ttgtgttaa 424  Q
    ||||||||||| |||||| | || ||| | || ||||||||||| ||||||| || ||||||||||| | | || | |||||||| | |  ||||||||     
T  4267821 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcaaaagctagtttttttttggattgtgttag 4267920  T
Q  425 gcccaaccacgatttttaagatggtatcaaa 455  Q
    |||||||||||||||||||||||||||||||    
T  4267921 gcccaaccacgatttttaagatggtatcaaa 4267951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 18037043 - 18036976
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||| ||||    
T  18037043 gattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctcta 18036976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 29737204 - 29737143
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||    
T  29737204 gattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 2544332 - 2544216
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | || ||||||||||| ||||||| || |||||| |||| |||||| |||||||| |  |||||||||| ||    
T  2544332 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgttaggc 2544233  T
Q  427 ccaaccacgatttttaa 443  Q
    || ||||||||||||||    
T  2544232 cctaccacgatttttaa 2544216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 17202145 - 17202272
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | |||||| | |  ||||||||||| ||||||| || ||||| ||||  | |||| || ||||| |  |||||||||| |    
T  17202145 ttgttaagagtcccacatcggttaagagttggcctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttagg 17202244  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||||||| |||||||||    
T  17202245 cccaaccacgatttttaatatggtatca 17202272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 439
Target Start/End: Complemental strand, 44874462 - 44874351
Alignment:
Q  328 gttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcc 427  Q
    |||||||||| |||||| |||| ||||||   ||||||| ||| ||||||| || | ||||||||| | |||||||  |||| ||||||||||||| |||    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcctcacctcacaaaccgattttgtatggttgtgttaggcc 44874363  T
Q  428 caaccacgattt 439  Q
    ||||||||||||    
T  44874362 caaccacgattt 44874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 29469572 - 29469698
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  29469572 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 29469671  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  29469672 ccaaccacgatttctaatatggtatca 29469698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 456
Target Start/End: Complemental strand, 44342998 - 44342917
Alignment:
Q  374 taagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatcaaag 456  Q
    |||||||||||||||||||| | |||| ||||||| |  |||||||||||||  ||||||| |||||||||||||||||||||    
T  44342998 taagttggagcaatcctcacctcacaagccagtttgtg-tggttgtgttaagatcaaccacaatttttaagatggtatcaaag 44342917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 2544531 - 2544438
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || ||||||||||| | ||||  | ||||| |  |||||||||| ||||||||||||||||||| |||||||||    
T  2544531 tgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatca 2544438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 25620136 - 25620229
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  25620136 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 25620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 31257385 - 31257253
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||| |||||||||| | || ||| | || ||||||||| | ||||||| || |||||||| | || |||| || ||||| |  |||||||||| |    
T  31257385 ttgttaagcgtctcacatcggttaggagttggtctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttagg 31257286  T
Q  426 cccaaccacgatttttaagatggtatcaaagct 458  Q
    |||||||||||||| ||| ||||||||| ||||    
T  31257285 cccaaccacgatttctaatatggtatcagagct 31257253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 3038201 - 3038082
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||  ||||||||| || | ||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  3038201 tgttaagagtcccacatcgaataagagattgtctaacaatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggc 3038102  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||| ||||| ||||||    
T  3038101 ccaaccatgatttctaagat 3038082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 451
Target Start/End: Original strand, 34027393 - 34027484
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtat 451  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||| |||||||    
T  34027393 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtat 34027484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 47710410 - 47710529
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | ||| |  | ||||| ||| ||||||| || ||||||||||| | |||| |||||||| |  |||||||||| ||    
T  47710410 tgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggc 47710509  T
Q  427 ccaaccacgatttttaagat 446  Q
    |||||||| |||| ||||||    
T  47710510 ccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 47722066 - 47722185
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | ||| |  | ||||| ||| ||||||| || ||||||||||| | |||| |||||||| |  |||||||||| ||    
T  47722066 tgttaagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggc 47722165  T
Q  427 ccaaccacgatttttaagat 446  Q
    |||||||| |||| ||||||    
T  47722166 ccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 48243176 - 48243060
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||||||| ||  | || ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  48243176 tgttaagagtcccacatcagatatga--tggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 48243079  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  48243078 ccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 5522845 - 5522966
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatg--gttgtgtta 423  Q
    |||||||||||| ||||||  ||||||| | || ||||||| ||| | ||||| ||||||||| |||| | |||| || || |||| ||  |||||||||    
T  5522845 ttgttaagagtcccacatcgtataagagttggtctgacaatgtgtttttaagtgggagcaatcttcacctcacaagccggtattttgtgaggttgtgtta 5522944  T
Q  424 agcccaaccacgatttttaaga 445  Q
     |||||||||||||||||||||    
T  5522945 cgcccaaccacgatttttaaga 5522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 15238447 - 15238385
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||| | ||| ||||||||||||||||    
T  15238447 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattg 15238385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 20010109 - 20010159
Alignment:
Q  24 atgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  20010109 atgtcattcttgaaatttttttgataaaatctttcttgatatatagcattg 20010159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 34027594 - 34027712
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| ||  || | |  ||||||||||| ||||||| || ||||||||||||| |||| || ||||| |  |||||||||| ||    
T  34027594 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggc 34027693  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||| |||||||| |||||    
T  34027694 ccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 30848634 - 30848597
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgata 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30848634 gattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 48243521 - 48243428
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||  |||||| || ||||| |  ||||||||||  |||||||| |||||||||||||||||||    
T  48243521 tgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatca 48243428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 453
Target Start/End: Original strand, 21821775 - 21821899
Alignment:
Q  329 ttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagccc 428  Q
    |||||| |||||||||||||| ||||| |  ||||||| |||  |||||| || |||||| |||  | |||||||  |||| |  | |||||||| ||||    
T  21821775 ttaagactctcacatcagatatgagatggcctgacaatatgttaataagtgggggcaatcttcatctcacaaaccgattttgtgggattgtgttaggccc 21821874  T
Q  429 aaccacgatttttaagatggtatca 453  Q
    ||||||||||| |||||||||||||    
T  21821875 aaccacgatttctaagatggtatca 21821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 2404526 - 2404399
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| ||| || |||| ||||  |  ||||||| ||| ||||||| || |||||||||||   ||||  | ||||| || || |||||||||    
T  2404526 ttgttaagagtcccacgtcggataggagacggactgacaatgtgtttataagtaggggcaatcctcaccccacaagtcggttttatagggctgtgttaag 2404427  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    | |||||||||||| |||||||||||||    
T  2404426 ctcaaccacgatttctaagatggtatca 2404399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 324 - 439
Target Start/End: Complemental strand, 31257151 - 31257036
Alignment:
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    |||| |||||||||||||||| | ||  || | || ||||||||||| ||||||| || |||||| |||| | ||||||||||||| |  ||||||||||    
T  31257151 tgttattaagagtctcacatcggttagaagttggtctgacaatttgtttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgtta 31257052  T
Q  424 agcccaaccacgattt 439  Q
      | ||||||||||||    
T  31257051 gactcaaccacgattt 31257036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 6634822 - 6634940
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | | || | |||||| |  |||||||||| ||    
T  6634822 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggc 6634921  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||| ||||| |||||    
T  6634922 ccaaccatgatttctaaga 6634940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 21861261 - 21861387
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| |||||||  | ||||||||||| |||||| || ||||| |  | |||||||| ||    
T  21861261 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggc 21861360  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  21861361 ccaaccaccatttctaagatggtatca 21861387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 42696148 - 42696086
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||| |||||||||||||||  || || ||||||||||| |||||||||| |||||    
T  42696148 gattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattg 42696086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 444
Target Start/End: Complemental strand, 6001552 - 6001435
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| ||||  ||||    ||||||| ||| ||||||| || ||||||||||| | | |||||  |||| || |||| |||||| |    
T  6001552 tgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaatcctcacctcagaaaccgattttgtagggttatgttaaac 6001453  T
Q  427 ccaaccacgatttttaag 444  Q
    ||||||||||||||||||    
T  6001452 ccaaccacgatttttaag 6001435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 446
Target Start/End: Complemental strand, 21055071 - 21054951
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| || ||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |    
T  21055071 ttgttaagagtcccatatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 21054972  T
Q  426 cccaaccacgatttttaagat 446  Q
    ||||||||| |||| ||||||    
T  21054971 cccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 29469807 - 29469919
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |   ||||||||| ||    
T  29469807 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggc 29469906  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  29469907 ccaaccacgattt 29469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 447
Target Start/End: Original strand, 1596840 - 1596915
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatg 447  Q
    ||||||| || ||||||||||| |||||| || ||||| || |||||||||| |||||||||| |||  |||||||    
T  1596840 tataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttaggcccaaccacaattactaagatg 1596915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 4886383 - 4886422
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  4886383 ggttgtgttaggcccaaccacgatttctaagatggtatca 4886422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 6782884 - 6782959
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||||||| |||||| || ||||| |  |||||||||| || |||||||||||| ||| ||||||||| ||||    
T  6782884 gcaatcctcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaacatggtatcagagct 6782959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 10882269 - 10882230
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  10882269 ggttgtgttaggcccaaccacgatttctaagatggtatca 10882230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 40121954 - 40121915
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  40121954 ggttgtgttaggcccaaccacgatttctaagatggtatca 40121915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 41190980 - 41191047
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcac 393  Q
    |||||||||||| ||||||||||| | |||| | ||||||| ||| |||||||  |||||||||||||    
T  41190980 ttgttaagagtcccacatcagatatgtgataatctgacaatatgtttataagtgagagcaatcctcac 41191047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 42985241 - 42985174
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcac 393  Q
    ||||||||||||||||||| |||| | ||| |||||||||| ||| ||||||| |  |||||||||||    
T  42985241 ttgttaagagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcctcac 42985174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 26562190 - 26562064
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| | || ||| | |  ||||||||||| ||||||| || |||||| |||| | |||| || ||||| |  |||| ||||| ||    
T  26562190 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggc 26562091  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
     ||||||| |||| ||| |||||||||    
T  26562090 tcaaccaccatttctaatatggtatca 26562064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 453
Target Start/End: Complemental strand, 33996340 - 33996302
Alignment:
Q  415 gttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  33996340 gttgtgttaggcccaaccacgatttctaagatggtatca 33996302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 21861529 - 21861614
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||| ||||||| || ||||||||||| |||||| ||  |||| |  |||||||||| |||||||||| |||| |||||    
T  21861529 tgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccaccatttctaaga 21861614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 25167715 - 25167655
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  25167715 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 25167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 440
Target Start/End: Complemental strand, 31485541 - 31485429
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||| ||||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | ||||||  ||||| |  ||||||||| ||     
T  31485541 tgttaagagtcccacataagatatgtgatggcctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgtt-agg 31485443  T
Q  427 ccaaccacgatttt 440  Q
    ||||||||||||||    
T  31485442 ccaaccacgatttt 31485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 48880786 - 48880726
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  48880786 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 48880726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 2401204 - 2401240
Alignment:
Q  419 tgttaagcccaaccacgatttttaagatggtatcaaa 455  Q
    |||||||||||| |||||||||||||||| |||||||    
T  2401204 tgttaagcccaagcacgatttttaagatgatatcaaa 2401240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 4268021 - 4268141
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccag-ttttttatggttgtgttaag 425  Q
    ||||||||||| |||||||| || ||| | |  ||||||||||| ||||||| || |||||| |||| | | || || | ||||||  |||||||||| |    
T  4268021 tgttaagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcatcacctcaaaagccggtttttttggggttgtgttagg 4268120  T
Q  426 cccaaccacgatttttaagat 446  Q
    |||||||| ||||| ||||||    
T  4268121 cccaaccaagatttctaagat 4268141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 35160822 - 35160752
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctataa 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  35160822 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctataa 35160752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10661952 - 10661890
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  10661952 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 10661890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 2324207 - 2324333
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | || ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  2324207 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 2324306  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||||||| |||||||||    
T  2324307 ccaaccacgatttttaatatggtatca 2324333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 9293576 - 9293638
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||    
T  9293576 gattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattg 9293638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 21936146 - 21936084
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  21936146 gattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattg 21936084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 23268062 - 23268124
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  23268062 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 23268124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 25082654 - 25082536
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||| |||||||||||||| || ||||||| ||| ||||||| || |||||| |||| | |||| |||||||| |  |||||||||| |     
T  25082654 tgttaagagtctcatatcagataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttaggt 25082555  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  25082554 ccaaccacgatttctaaga 25082536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 31174834 - 31174900
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttct 78  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||    
T  31174834 gattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattgttct 31174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 33380272 - 33380210
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33380272 gattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattg 33380210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 14466527 - 14466401
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| |||||||||||||| |||||| || ||||| |  |||||||||| ||    
T  14466527 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggc 14466428  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  14466427 ccaaccaccatttctaagatggtatca 14466401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 13354910 - 13354849
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||    
T  13354910 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattg 13354849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 14941366 - 14941434
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    ||||||||||||||||||||||| ||  |||||| ||||||||||| |||||||||||||||| |||||    
T  14941366 gattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcattgctctat 14941434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 7475508 - 7475575
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    |||||||||  |||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||    
T  7475508 gattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctcta 7475575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 452
Target Start/End: Original strand, 15464735 - 15464861
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||| |||||||| ||| ||||| || ||||||| ||| | ||||| || ||||||||||| | ||||||||||||| |  |||||||||| |    
T  15464735 ttgttaagagtttcacatcaaatatgagatggtctgacaatgtgtatttaagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttagg 15464834  T
Q  426 cccaaccacgatttttaagatggtatc 452  Q
    |  |||||||| || | ||||||||||    
T  15464835 cttaaccacgacttattagatggtatc 15464861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 16419469 - 16419587
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| || || || ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  16419469 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 16419568  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  16419569 ccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 456
Target Start/End: Original strand, 17719366 - 17719496
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||  |    
T  17719366 ttgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcgg 17719465  T
Q  426 cccaaccacgatttttaagatggtatcaaag 456  Q
    ||||||||| |||| ||||||||||||||||    
T  17719466 cccaaccacaatttctaagatggtatcaaag 17719496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21393688 - 21393750
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||| |||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||    
T  21393688 gattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattg 21393750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 40379561 - 40379435
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| |  ||||| | ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  40379561 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 40379462  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  40379461 ccaaccacgatttctaagatggtatca 40379435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 43330977 - 43330915
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || |||| |||| ||||||||| ||||||||||||||||    
T  43330977 gattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattg 43330915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 439
Target Start/End: Original strand, 8424854 - 8424967
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||| |||| |||||||| || ||| | || ||||||||| | ||||||| || |||||| |||| | ||||||||||||| |  ||||||||||||    
T  8424854 ttgttaaaagtcccacatcagttaggagttggtctgacaatttatttataagtgggggcaatcatcacctcacaaaccagttttgtggggttgtgttaag 8424953  T
Q  426 cccaaccacgattt 439  Q
    | ||||||||||||    
T  8424954 ctcaaccacgattt 8424967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 15124902 - 15124774
Alignment:
Q  326 ttgttaagagtctcacatcagat-aagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaa 424  Q
    ||||||||||||||||||||||| |||| || || ||||| | ||| |||||||  | |||||| |||||| ||||  | ||||| |  ||||||||||     
T  15124902 ttgttaagagtctcacatcagattaagacatggtatgacagtgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttag 15124803  T
Q  425 gcccaaccacgatttttaagatggtatca 453  Q
     |||||||||||||| |||||||||||||    
T  15124802 acccaaccacgatttctaagatggtatca 15124774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 453
Target Start/End: Complemental strand, 28407875 - 28407784
Alignment:
Q  362 acaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||| ||||||| || ||||||||||| | |||| || ||||| |   ||||||||| ||||||||||||||| |||||||||||||    
T  28407875 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatca 28407784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 9723470 - 9723408
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||||||  |||||| ||||||||||| || |||||||||||||    
T  9723470 gattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattg 9723408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 29718295 - 29718421
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | | |||||||||||| |||||||  | ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  29718295 tgttaagagtcccacatcggttaggagttggcttgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 29718394  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    | ||||||||||| |||| ||||||||    
T  29718395 ctaaccacgatttctaagttggtatca 29718421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 3989141 - 3989104
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgata 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3989141 gattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 36316168 - 36316056
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| ||  || | |  ||||||||||| ||||||| || ||||||||||| |||||| |||||||| |  |||| ||||| |     
T  36316168 tgttaagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcctcacattacaagccagttttgtggggttatgttaggt 36316069  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  36316068 ccaaccacgattt 36316056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 37770060 - 37769944
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |||||||||||||| ||||||| || |||||| |||| | | || || ||||| |  ||||||||||  |    
T  37770060 tgttaagagtcccacatcggttaggagttggtttgacaatttgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttagac 37769961  T
Q  427 ccaaccacgatttttaa 443  Q
    |||||||||||||||||    
T  37769960 ccaaccacgatttttaa 37769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 93384 - 93345
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  93384 ggttgtgttaggcccaaccacgatttttaagatggtatca 93345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 2029735 - 2029862
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| |||| || ||    ||||||| ||| ||||||| |  ||||||||||| | |||| || ||||| |  |||||| ||| |    
T  2029735 ttgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttagg 2029834  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||| |||||||||||||    
T  2029835 cccaaccacgatttctaagatggtatca 2029862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 5711556 - 5711438
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  5711556 tgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggc 5711457  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  5711456 ccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 40379326 - 40379208
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| |  ||||| | ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  40379326 tgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 40379227  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  40379226 ccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 5509043 - 5509172
Alignment:
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    |||| ||||||||| |||||| | || ||| | || ||||||||||| ||||||| || | ||||||||| | |||| |  ||||| |  ||||||||||    
T  5509043 tgttattaagagtcacacatcggttaggagttggtctgacaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgtta 5509142  T
Q  424 agcccaaccacgatttttaagatggtatca 453  Q
     ||||||||| ||||| ||| |||||||||    
T  5509143 ggcccaaccatgatttctaatatggtatca 5509172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 23267921 - 23267861
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  23267921 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 23267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 27897722 - 27897594
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||| ||||| | ||||  | ||||| |  |||||||||| ||    
T  27897722 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggg-gcaattctcacctcacaagtcggttttgtggggttgtgttaggc 27897624  T
Q  427 ccaaccacgatttttaagatggtatcaaag 456  Q
    |||||||| |||| ||||||||||||||||    
T  27897623 ccaaccaccatttctaagatggtatcaaag 27897594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 1926558 - 1926442
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||  | |||||| | ||| |||||||| | ||||||| || | ||||||||| | ||||| | ||||| || | |||||||| ||    
T  1926558 tgttaagagtcccacattggttaagagttggttagacaatttatttataagtgggggtaatcctcacctcacaaatcggttttgtaggattgtgttaggc 1926459  T
Q  427 ccaaccacgatttttaa 443  Q
     ||||||||||||||||    
T  1926458 tcaaccacgatttttaa 1926442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 93657 - 93618
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  93657 ggttgtgttaggcccaaccacgatttctaagatggtatca 93618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 2324474 - 2324553
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgattt 439  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| || ||||||||||||    
T  2324474 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgattt 2324553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 446
Target Start/End: Original strand, 14927073 - 14927188
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    ||||||| |||||| ||||||||||    ||||||| ||| ||||||| || ||||||||||| | | ||  ||| ||| | ||||||||||| || |||    
T  14927073 aagagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaa 14927172  T
Q  431 ccacgatttttaagat 446  Q
    ||||||||| ||||||    
T  14927173 ccacgatttctaagat 14927188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 10570993 - 10571063
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||| |||| |||||| || ||||| |  |||||||||| || |||||||||||| |||||||||||||    
T  10570993 gcaatcttcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaagatggtatca 10571063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 27847697 - 27847635
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| ||  |||||| ||||||||||| || ||||| |||||||    
T  27847697 gattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattg 27847635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 437
Target Start/End: Original strand, 32884074 - 32884184
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  32884074 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 32884173  T
Q  427 ccaaccacgat 437  Q
    ||||| |||||    
T  32884174 ccaactacgat 32884184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9723612 - 9723665
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    |||||||||| |||||||||||||||  ||||||||| ||||| || |||||||    
T  9723612 gattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatat 9723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 17719578 - 17719651
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| || |||||||| || | ||||||| ||||| |  |||||||||| ||||||||||||||| |||||    
T  17719578 tataagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 22591547 - 22591494
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    |||||||||||||| |||||||| || |||| || ||||||||||| |||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatat 22591494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 22592918 - 22592979
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| || |||||||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  22592918 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 33380413 - 33380473
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  33380413 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33380473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 35160965 - 35161025
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  35160965 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 35161025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 37840303 - 37840428
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||  |||| |||||    ||||||| ||| ||||||| |  |||||| |||| | |||| || ||||| |  |||||||||  |    
T  37840303 ttgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttggg 37840402  T
Q  426 cccaaccacgatttttaagatggtat 451  Q
    ||||||||| ||||||||||||||||    
T  37840403 cccaaccacaatttttaagatggtat 37840428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 40262714 - 40262751
Alignment:
Q  40 tttcttgataaaatcttttttgatatatagcattgttc 77  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  40262714 tttcttgataaaatctttcttgatatataacattgttc 40262751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 5509280 - 5509396
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| || ||| | |   |||||||||| ||||||| || |||||||||||   |||| || ||||| |  ||| |||||| |     
T  5509280 tgttaagagtcccacatcagttaggagttggcccgacaatttgtttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgttaggt 5509379  T
Q  427 ccaaccacgatttttaa 443  Q
    |||||||||||||||||    
T  5509380 ccaaccacgatttttaa 5509396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 11099716 - 11099656
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctc 391  Q
    |||||||||||||||||||||||||    ||||||| ||| |||||||||| ||| |||||    
T  11099716 aagagtctcacatcagataagagatgacctgacaatgtgtttataagttggtgcagtcctc 11099656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 3559682 - 3559611
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctataat 83  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  3559682 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattgttctttaat 3559611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 18404507 - 18404445
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18404507 gattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 18404445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 25463741 - 25463679
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  25463741 gattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattg 25463679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40215053 - 40214991
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40215053 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 40214991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 16045798 - 16045859
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  16045798 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 41876442 - 41876509
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| ||||    
T  41876442 gattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctcta 41876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 9910293 - 9910355
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  9910293 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 9910355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 44094763 - 44094701
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  44094763 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattg 44094701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 19015469 - 19015407
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  19015469 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 19015407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 36966708 - 36966770
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  36966708 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 36966770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37821834 - 37821896
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  37821834 gattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 37821896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 42586555 - 42586438
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||||||||| |  ||||||| ||| |||||| ||| ||||||||||| | |||| ||| |||| |  |||||||||| ||    
T  42586555 tgttaagagtctcacatcggataagagatggcctgacaatgtgtatataag-tggggcaatcctcacctcacaagccaattttgtggggttgtgttaggc 42586457  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  42586456 ccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 4098280 - 4098161
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||||||||||  ||| ||||| || |||| || ||| ||||||| || ||||||||| ||| ||||||| ||||| | || |||||||| ||    
T  4098280 tgttaagagtctcacatcgaatatgagatcgtctgacgatgtgtttataagtgggggcaatcctctcttcacaaaccggttttgtgtgattgtgttaggc 4098181  T
Q  427 ccaaccacgatttttaagat 446  Q
    |||||||| |||| ||||||    
T  4098180 ccaaccacaatttctaagat 4098161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 457
Target Start/End: Original strand, 51588958 - 51589089
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | || ||||||||||| |||||||  | ||||||||||| | |||| || ||||| |  |||||||||| |    
T  51588958 ttgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttagg 51589057  T
Q  426 cccaaccacgatttttaagatggtatcaaagc 457  Q
    ||||||||| |||| ||| |||||||||||||    
T  51589058 cccaaccaccatttctaatatggtatcaaagc 51589089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 3169733 - 3169859
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | || ||||||||||| ||||||| || |||||| |||| | |||| || ||||| |  |||||||||| ||    
T  3169733 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggc 3169832  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  3169833 ccaaccacgatttctaatatggtatca 3169859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 4098519 - 4098394
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| ||||| |||| |||||| ||| ||| ||||||| || ||||||||||| ||||||    ||||| |  |||||||||| ||    
T  4098519 tgttaagagtcgcacatcggataatagatggtttgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgt-gggttgtgttaggc 4098421  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||| ||||||||    
T  4098420 ccaaccacgatttctaagttggtatca 4098394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6883552 - 6883490
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||||||||    
T  6883552 gattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattg 6883490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 453
Target Start/End: Complemental strand, 39348457 - 39348344
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatt 438  Q
    ||||||||||| ||||| | |||||||  ||| ||||||| || ||||||||||| | ||||||| ||||| |  |||||||||| |||||| |||||||    
T  39348457 cacatcagataggagatggcttgacaacgtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaa-cacgatt 39348359  T
Q  439 tttaagatggtatca 453  Q
    | |||||||||||||    
T  39348358 tctaagatggtatca 39348344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 4113090 - 4112998
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatc 452  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||||||||||||    
T  4113090 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatc 4112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 32000269 - 32000329
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||| |||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  32000269 ttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattg 32000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 51589193 - 51589324
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | || ||||||||||| |||||||  | ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  51589193 tgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 51589292  T
Q  427 ccaaccacgatttttaagatggtatcaaagct 458  Q
    | ||||||||||| ||| ||||||||| ||||    
T  51589293 ctaaccacgatttctaatatggtatcagagct 51589324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 451
Target Start/End: Complemental strand, 17452947 - 17452821
Alignment:
Q  325 gttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaa 424  Q
    ||||||||||||| |||||| ||||||| || |  ||||||| | | ||||||| || |||||| |||| | |||| || ||||| |  ||||||||||     
T  17452947 gttgttaagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttag 17452848  T
Q  425 gcccaaccacgatttttaagatggtat 451  Q
    ||| ||||||||||| |||||||||||    
T  17452847 gcctaaccacgatttctaagatggtat 17452821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 25973478 - 25973417
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  25973478 gattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattg 25973417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 30369802 - 30369928
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||  |||||| |||| ||||| ||  |||||| ||| ||||||| || ||||||||||| | ||||   |||||| |  |||||||||| ||    
T  30369802 tgttaagagttccacatcggatatgagatggtccgacaatatgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggc 30369901  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||| ||||||    
T  30369902 ccaaccacgatttctaagattgtatca 30369928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 11924887 - 11925004
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||  |||||| |||| | ||| || ||||||| ||| ||||||| || | | | ||||| ||||||||| ||||| |  |||||||||| |    
T  11924887 ttgttaagagttacacatcggataggtgatggtctgacaatatgtttataagtgggggtatttctcaccttacaaaccggttttgtgaggttgtgttagg 11924986  T
Q  426 cccaaccacgatttttaa 443  Q
    ||||||||||||||||||    
T  11924987 cccaaccacgatttttaa 11925004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 25145602 - 25145483
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | ||| || ||||||| ||| ||| ||| || ||||||||||| | ||||  | ||||| |  ||||||||||  |    
T  25145602 tgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagac 25145503  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  25145502 ccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 35772231 - 35772350
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| ||||| |  ||||||| ||| ||||||| || |||||||| || | | || || ||||| |  |||||||||| ||    
T  35772231 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggc 35772330  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  35772331 ccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 27523255 - 27523328
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttga--tatatagcattgttctataat 83  Q
    |||||||||| ||||||||||||||| |||||||||||||||  || ||||  |||||||||||| ||| ||||    
T  27523255 gattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtatatagcattgctctttaat 27523328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 40273767 - 40273705
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| || |||||||||||| || ||||||||| ||||||||| ||||||| ||||||||    
T  40273767 gattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattg 40273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 44690881 - 44690815
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttct 78  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| || ||||||| || |||| ||||    
T  44690881 gattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttct 44690815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 52064434 - 52064376
Alignment:
Q  15 tattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  52064434 tattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcatt 52064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 439
Target Start/End: Complemental strand, 17452789 - 17452684
Alignment:
Q  334 agtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaacca 433  Q
    |||| |||||||||||||| || |  ||||||| | | ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |||||||||    
T  17452789 agtcccacatcagataagacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 17452690  T
Q  434 cgattt 439  Q
    ||||||    
T  17452689 cgattt 17452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 26177155 - 26177228
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| || ||||||||||| | | ||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  26177155 tataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 40079152 - 40079237
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| |||||    
T  40079152 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 51589806 - 51589899
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| |||||||  | ||||||||||| | |||| ||  |||| |  |||||||||| ||||||||||||||| ||| |||||||||    
T  51589806 tgacaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 51589899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 51590007 - 51590117
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| || ||| | || ||||||||||| |||||||  ||||||||||||| | |||| || ||||| |  | |||||||| ||    
T  51590007 tgttaagagtcccacatcagttaggagtttgtctgacaatttgtttataagt--gagcaatcctcacctcacaagccggttttgtgggattgtgttaggc 51590104  T
Q  427 ccaaccacgattt 439  Q
    |||| ||||||||    
T  51590105 ccaagcacgattt 51590117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 451
Target Start/End: Complemental strand, 2859744 - 2859620
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | ||| || ||||||| ||| ||| ||| || | ||||||||| | |||| || ||||| |  ||||||||||  |    
T  2859744 tgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagcc 2859645  T
Q  427 ccaaccacgatttttaagatggtat 451  Q
    |||||||  |||| |||||||||||    
T  2859644 ccaaccatcatttctaagatggtat 2859620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 33156756 - 33156824
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtat 451  Q
    ||||||||||  | ||||||| ||||| |  |||||||||| ||||||||||||||| |||||||||||    
T  33156756 gcaatcctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtat 33156824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 38080572 - 38080683
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||  ||||| |  ||||||| ||| ||||| |||| ||||||||||| | |||| |||||||| |  |||||||||| ||    
T  38080572 tgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataa-ttggggcaatcctcacctcacaagccagttttgtggggttgtgttaggc 38080670  T
Q  427 ccaaccacgattt 439  Q
    |||||||| ||||    
T  38080671 ccaaccacaattt 38080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 17402636 - 17402675
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  17402636 ggttgtgttaggcccgaccacgatttttaagatggtatca 17402675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 25713360 - 25713479
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| || ||||||| ||| ||||||| || |||||| |||| | |||| |||||||| |   ||||||||| ||    
T  25713360 tgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgttaggc 25713459  T
Q  427 ccaaccacgatttttaagat 446  Q
    | |||||| |||| ||||||    
T  25713460 ctaaccaccatttctaagat 25713479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 26173573 - 26173466
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||||||| ||||| || ||||||| ||| ||||||| || ||||| ||||| ||  || || ||||| |  |||||||||| |     
T  26173573 tgttaagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgttaggt 26173474  T
Q  427 ccaaccac 434  Q
    ||||||||    
T  26173473 ccaaccac 26173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 29266007 - 29266046
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  29266007 ggttgtgttaggcccaaccacgatttctaagatggtatca 29266046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 35772083 - 35772122
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  35772083 ggttgtgttaggcccaaccacgatttctaagatggtatca 35772122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Complemental strand, 23436600 - 23436566
Alignment:
Q  419 tgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||||||||||||||||||| |||||    
T  23436600 tgttaagcccaaccacgatttttaagatgatatca 23436566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 35892258 - 35892384
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||||||  |||| || ||||||| | | ||||||| || ||||| ||||| | |||| || ||||| |  |||| ||||| ||    
T  35892258 tgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgttaggc 35892357  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
     ||||||  |||| |||||||||||||    
T  35892358 tcaaccataatttctaagatggtatca 35892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 18404654 - 18404714
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  18404654 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 18404714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 19015610 - 19015670
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  19015610 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatgtagcatt 19015670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 400
Target Start/End: Original strand, 38668327 - 38668400
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaa 400  Q
    ||||||||||| |||||| |||| | ||| |||||||||| ||| ||||||| || |||||| |||| ||||||    
T  38668327 tgttaagagtcccacatcggatatgtgatggtttgacaatgtgtttataagtgggggcaatcatcaccttacaa 38668400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 51737711 - 51737771
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  51737711 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 51737771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 395
Target Start/End: Complemental strand, 21626452 - 21626388
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactt 395  Q
    ||||||| ||||||||||||||||| |  ||||||| ||| ||||||| || || ||||||||||    
T  21626452 aagagtcccacatcagataagagatggcctgacaatatgtttataagtgggggccatcctcactt 21626388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 34519795 - 34519755
Alignment:
Q  40 tttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    |||||| ||||||||||| |||||||||||||||| |||||    
T  34519795 tttcttaataaaatctttcttgatatatagcattgctctat 34519755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 8e-25; HSPs: 77)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32393923 - 32393861
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32393923 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 32393861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 1645965 - 1646027
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  1645965 gattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattg 1646027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14128929 - 14128867
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  14128929 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattg 14128867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32064810 - 32064748
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  32064810 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 32064748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 34665447 - 34665385
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  34665447 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 34665385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 35353106 - 35353044
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  35353106 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattg 35353044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37132658 - 37132720
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  37132658 gattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattg 37132720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 37986055 - 37986116
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  37986055 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 17841850 - 17841912
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  17841850 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 17841912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 20091801 - 20091863
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  20091801 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattg 20091863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 24211553 - 24211615
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||    
T  24211553 gattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattg 24211615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 40780129 - 40780191
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  40780129 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 40780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 42755042 - 42755104
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||    
T  42755042 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattg 42755104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 15187624 - 15187563
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  15187624 attattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattg 15187563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 38017036 - 38016979
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatag 69  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  38017036 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatag 38016979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 6108233 - 6108295
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||    
T  6108233 gattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattg 6108295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 11232546 - 11232420
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || || ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  11232546 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 11232447  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  11232446 ccaaccaccatttctaagatggtatca 11232420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 26042116 - 26042178
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  26042116 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattg 26042178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 324 - 453
Target Start/End: Complemental strand, 5590488 - 5590359
Alignment:
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    ||||||| |||||| |||||| |||| ||||| || ||||||| ||| || |||| || ||||||||||||| |||| || ||||| |  ||||||||||    
T  5590488 tgttgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtta 5590389  T
Q  424 agcccaaccacgatttttaagatggtatca 453  Q
     |||||||||| |||| ||| |||||||||    
T  5590388 ggcccaaccacaatttctaaaatggtatca 5590359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 8453899 - 8453834
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttc 77  Q
    ||||||| || |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  8453899 gattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgttc 8453834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 41819778 - 41819846
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| |||||||||| ||||| |||||    
T  41819778 gattattctgccatatcattcttaaaacattcttgataaaatctttcttgatatataacattgctctat 41819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 24532539 - 24532412
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| |||| ||||| |  ||||||| ||| ||||||| || |||||| |||| | |||| || ||||| |  |||||||||| |    
T  24532539 ttgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttagg 24532440  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||| ||||| |||||||||||||    
T  24532439 cccaaccatgatttctaagatggtatca 24532412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 11232311 - 11232185
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  11232311 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 11232212  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  11232211 ccaaccaccatttctaagatggtatca 11232185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 20301228 - 20301354
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||  |||||  |||| ||||| | |||||||| ||| ||||||| || |||||||| || | |||| || ||||| |  |||||||||| ||    
T  20301228 tgttaagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggc 20301327  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  20301328 ccaaccacgatttctaagatggtatca 20301354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 21087860 - 21087986
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||  |||||  |||| ||||| | |||||||| ||| ||||||| || |||||||| || | |||| || ||||| |  |||||||||| ||    
T  21087860 tgttaagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggc 21087959  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  21087960 ccaaccacgatttctaagatggtatca 21087986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 31347782 - 31347844
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||||| ||| ||||||||||||||||    
T  31347782 gattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattg 31347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 39772801 - 39772863
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| |||||    
T  39772801 gattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattg 39772863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 39053047 - 39052922
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |    
T  39053047 ttgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 39052948  T
Q  426 cccaaccacgatttttaagatggtat 451  Q
    |||||| ||||||| |||||||||||    
T  39052947 cccaacaacgatttctaagatggtat 39052922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 7017865 - 7017927
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||| | |||||||||  |||||||||||||||    
T  7017865 gattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattg 7017927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 17469785 - 17469911
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  17469785 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 17469884  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
     |||||||||||| ||| |||||||||    
T  17469885 tcaaccacgatttctaatatggtatca 17469911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 19256937 - 19256811
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| |  ||||| |  |||||||||| ||    
T  19256937 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggc 19256838  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  19256837 ccaaccacgatttctaatatggtatca 19256811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 445
Target Start/End: Complemental strand, 22638292 - 22638178
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    |||||||||||||| |||||||||| |  || |||  ||| ||||||| || |||||||||||   |||| || ||||| |  |||||||||||||||||    
T  22638292 aagagtctcacatcggataagagatggcctgtcaaagtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaa 22638193  T
Q  431 ccacgatttttaaga 445  Q
    ||||||||| |||||    
T  22638192 ccacgatttctaaga 22638178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 27782117 - 27782179
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||| || ||  |||||||||||||| ||| ||||||||||||||||    
T  27782117 gattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcattg 27782179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 36917556 - 36917430
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||||||||||||||| |  || |  ||||||| | | ||||||| || | ||||||||| | ||||  ||||||| |  |||||||||||||    
T  36917556 tgttaagagtctcacatcagataggtaatggcctgacaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagc 36917457  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
     ||||||| |||| |||||||||||||    
T  36917456 acaaccaccatttctaagatggtatca 36917430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 19256703 - 19256591
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  19256703 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 19256604  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  19256603 ccaaccacgattt 19256591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 25581239 - 25581299
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcat 72  Q
    ||||||| ||||||||||||||| ||||||||||  ||||| |||| ||||||||||||||    
T  25581239 gattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 39743496 - 39743608
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| |||||||||| ||||||||||| | |||| ||  |||| |  |||||||||| ||    
T  39743496 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggc 39743595  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  39743596 ccaaccacgattt 39743608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 453
Target Start/End: Complemental strand, 5932266 - 5932175
Alignment:
Q  362 acaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||| ||| ||||||| || |||| |||||| | |||| || ||||| |  |||||||||| |||||||||| ||||||||||||||||||    
T  5932266 acaatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatca 5932175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 7022043 - 7021988
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatat 67  Q
    |||||||||||||| |||||||| || ||||||||| ||||||||| |||||||||    
T  7022043 gattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 445
Target Start/End: Original strand, 10449966 - 10450085
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||||||||||| |||| || || |  ||||||| ||| |||||||  | ||||||||||| | | || || ||||| || |||||||||| |    
T  10449966 ttgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttagg 10450065  T
Q  426 cccaaccacgatttttaaga 445  Q
    | |||||||||||| |||||    
T  10450066 ctcaaccacgatttctaaga 10450085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 39960158 - 39960277
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggag-caatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||| |||||| |||| ||||| |  ||| ||||||| ||||||| || | |||||||||| | |||| || ||||| |  |||||||||| |    
T  39960158 tgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 39960257  T
Q  426 cccaaccacgatttttaaga 445  Q
    |||||||||||||| |||||    
T  39960258 cccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 42846723 - 42846604
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttg-gagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||||||||| | || ||| | |  ||||||||||| ||||||| | | ||||||||||| | |||| || ||||| |  |||||||||| |    
T  42846723 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttagg 42846624  T
Q  426 cccaaccacgatttttaaga 445  Q
    |||||||||||||| |||||    
T  42846623 cccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 5932066 - 5931948
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||||||  | || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||| ||||| ||    
T  5932066 tgttaagagtcccacatcagatagtacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggc 5931967  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||||||| ||||||||||    
T  5931966 ccaaccaccatttttaaga 5931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 6462930 - 6463051
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    |||||| ||||||| ||||||||||   |||||||| ||| ||||||| |  |||| |||| ||| ||||||  ||||| |  |||||||||| ||||||    
T  6462930 aagagtttcacatcggataagagatgacttgacaatgtgtttataagtggaggcaa-cctcgcttaacaaacaggttttgtgcggttgtgttatgcccaa 6463028  T
Q  431 ccacgatttttaagatggtatca 453  Q
    |||| |||||||||||| |||||    
T  6463029 ccacaatttttaagatgatatca 6463051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 27835453 - 27835515
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| | ||||||||||||| || ||||||| |||| |||||| ||||||||||||||||    
T  27835453 gattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcattg 27835515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 30835047 - 30835108
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||  |||||| | |||||||||||| |||||||||| |||||    
T  30835047 gattattctgccatgtcattctt-gaattttttcgataaaatctttcttgatatataacattg 30835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 3890474 - 3890413
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    |||||||||||||| |||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  3890474 gattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcatt 3890413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 4828068 - 4828161
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| ||  |||||||||| | |||| || ||||| |  |||||||||| ||||||||||||| | ||| |||||||||    
T  4828068 tgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatca 4828161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 20094916 - 20094786
Alignment:
Q  325 gttgttaagagtctcacatca---gataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgt 421  Q
    ||||||||||||| |||||||   ||||| |||| || | ||||| ||| |||| || || ||||||||||| |||||| || ||||| |  |||||| |    
T  20094916 gttgttaagagtcccacatcatcggataaaagatggtcttacaatatgtttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgt-t 20094818  T
Q  422 taagcccaaccacgatttttaagatggtatca 453  Q
    || ||||||||||||||| |||| ||||||||    
T  20094817 taggcccaaccacgatttataagttggtatca 20094786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 439
Target Start/End: Complemental strand, 24075424 - 24075311
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | |  ||||| ||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |    
T  24075424 ttgttaagagtcccacatcggttaggagttggcctgacactttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 24075325  T
Q  426 cccaaccacgattt 439  Q
    ||||||||||||||    
T  24075324 cccaaccacgattt 24075311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 39984782 - 39984879
Alignment:
Q  328 gttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||||||||   || ||| | || ||||||||||| ||||||| || ||||||||||| | |||| |||||||| |  ||||||||||||    
T  39984782 gttaagagtctcacatcgattaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaag 39984879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 7267582 - 7267470
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | | |||||||||||| ||||||| || |||||| |||| | |||| || ||||| || ||||||||||  |    
T  7267582 tgttaagagtcacacatcggttaggagttggcttgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtagggttgtgttagac 7267483  T
Q  427 ccaaccacgattt 439  Q
    |||||||| ||||    
T  7267482 ccaaccaccattt 7267470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 17477032 - 17477144
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  17477032 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 17477131  T
Q  427 ccaaccacgattt 439  Q
     ||||||||||||    
T  17477132 tcaaccacgattt 17477144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 4828293 - 4828372
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgattt 439  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |||||||||| ||||    
T  4828293 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 4828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 10884118 - 10884157
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  10884118 ggttgtgttaggcccaaccacgatttctaagatggtatca 10884157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 12317012 - 12317139
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| || | || || || ||||||| ||| ||||||| || ||||||||||| | | || |   |||| |  | |||||||| |    
T  12317012 ttgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttagg 12317111  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||| |||||||||||||    
T  12317112 cccaaccacgatttctaagatggtatca 12317139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 434
Target Start/End: Complemental strand, 36907541 - 36907438
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    ||||||| ||| ||||||||||||| || ||||||| |||  | |||| || ||||| ||||| |||||| |||||||  |  |||||||||| ||||||    
T  36907541 aagagtcccacgtcagataagagatggtctgacaatgtgttcaaaagtgggggcaattctcacattacaagccagtttggtggggttgtgttaggcccaa 36907442  T
Q  431 ccac 434  Q
    ||||    
T  36907441 ccac 36907438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 451
Target Start/End: Original strand, 38475759 - 38475838
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtat 451  Q
    ||||||| || ||||||||||| | |||| || ||||| || |||||||||| |||||||||| | || |||||||||||    
T  38475759 tataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaagatggtat 38475838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 41790712 - 41790751
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  41790712 ggttgtgttaggcccaaccacgatttctaagatggtatca 41790751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 438
Target Start/End: Original strand, 8715871 - 8715981
Alignment:
Q  329 ttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctca-ctttacaaaccagttttttatggttgtgttaagcc 427  Q
    |||||||||||||||| ||| |||||||  |||||||| |||||||||||  | ||||| |||| | | ||||  | |||||||  ||||| |||| |||    
T  8715871 ttaagagtctcacatcggatgagagataacttgacaatatgtctataagtgagggcaattctcaccatcacaagtcggttttttgaggttgggttaggcc 8715970  T
Q  428 caaccacgatt 438  Q
    |||||||||||    
T  8715971 caaccacgatt 8715981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 29907839 - 29907777
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcac 393  Q
    ||||||| |||||| ||||||||||||| ||||||| ||| ||||||| ||  ||||||||||    
T  29907839 aagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcctcac 29907777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 34236753 - 34236699
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcac 393  Q
    |||||| |||||||||| || ||||||| ||| ||||||| ||||||||||||||    
T  34236753 cacatcggataagagatggtctgacaatgtgtttataagtgggagcaatcctcac 34236699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 1503702 - 1503642
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  1503702 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 1503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 3596900 - 3596840
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||| ||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  3596900 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 3890616 - 3890653
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgata 49  Q
    ||||||||||||||||||||||| || |||||||||||    
T  3890616 gattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 17841709 - 17841649
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  17841709 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 17841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 24844720 - 24844667
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||| ||||||| ||||||||||  ||||||||||||||| || |||||||    
T  24844720 gattattttgccatgccattcttaaatctttcttgataaaatcattattgatat 24844667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 26041972 - 26041912
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  26041972 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26041912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 32064952 - 32065012
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| || ||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  32064952 gattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 32065012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 35682865 - 35682780
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||| ||||||| || ||||||||||| |  ||| || ||||| |  |||||||||| ||||||||||||||| |||||    
T  35682865 tgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 453
Target Start/End: Complemental strand, 37868611 - 37868574
Alignment:
Q  416 ttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  37868611 ttgtgttaggcctaaccacgatttttaagatggtatca 37868574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 40779988 - 40779928
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  40779988 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 40779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 42754901 - 42754841
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| | |||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  42754901 gattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 42754841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 422334 - 422222
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||| |||| |||||| |||| ||||| || ||||||| ||| || |||| |  ||||||||||| | |||| |||||||| |  |||| ||||| ||    
T  422334 tgttaaaagtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcctcacctcacaagccagttttgtggggttatgttaggc 422235  T
Q  427 ccaaccacgattt 439  Q
    | |||||||||||    
T  422234 caaaccacgattt 422222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 3597042 - 3597078
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgata 49  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  3597042 attattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 423
Target Start/End: Original strand, 34843084 - 34843180
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    ||||||||||| |||||| | || ||| | || | ||||||||| ||||||| |||||||||||||| | |||| || ||||| |  ||||||||||    
T  34843084 tgttaagagtcccacatcggttaggagttggtctaacaatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggggttgtgtta 34843180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 432
Target Start/End: Complemental strand, 45031433 - 45031373
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaacc 432  Q
    ||||||| || ||||||||||| |||||| || ||||| || |||||||||| ||||||||    
T  45031433 tataagtcggggcaatcctcaccttacaagccggttttgtaaggttgtgttaggcccaacc 45031373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6127340 - 6127278
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6127340 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 6127278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 23291084 - 23291146
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23291084 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 23291146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 17705465 - 17705527
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17705465 gattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 17705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 33695327 - 33695389
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  33695327 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 33695389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 33696761 - 33696699
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  33696761 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 33696699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 18365573 - 18365635
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  18365573 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattg 18365635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 18370837 - 18370899
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  18370837 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattg 18370899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 8515725 - 8515789
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgtt 76  Q
    ||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||    
T  8515725 gattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcattgtt 8515789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 325 - 453
Target Start/End: Original strand, 33494504 - 33494632
Alignment:
Q  325 gttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaa 424  Q
    ||||||||||||| |||||| |||| ||||| | |||| ||| ||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||     
T  33494504 gttgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 33494603  T
Q  425 gcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| |||| |||||||||||||    
T  33494604 gcccaaccaccatttctaagatggtatca 33494632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 6542825 - 6542707
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| ||||| || ||||||| ||| ||||| | || |||||| |||| | ||||||| ||||| || ||||||||||||     
T  6542825 tgttaagagtctcacatcggataggagatggtctgacaatctgtttataaatggg-gcaatcatcacctcacaaaccggttttgtagggttgtgttaagt 6542727  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  6542726 ccaaccacgatttctaagat 6542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 6031741 - 6031803
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  6031741 gattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattg 6031803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 17176021 - 17176083
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  17176021 gattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattg 17176083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 25986995 - 25986933
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  25986995 gattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattg 25986933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 28675213 - 28675151
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||| | |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  28675213 gattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 28675151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 30256545 - 30256671
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| || || | || |||||||||| ||| ||||| | || ||||||||||  | ||||||| ||||| |  |||||||||| ||    
T  30256545 tgttaagagtctcacatcggacaatacatggtttgacaatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggc 30256644  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||| ||||||||    
T  30256645 ccaaccacgatttctaaggtggtatca 30256671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 18889698 - 18889758
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  18889698 attattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattg 18889758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 33796292 - 33796419
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| |    
T  33796292 ttgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttagg 33796391  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    ||||||||| |||| |||||||||||||    
T  33796392 cccaaccaccatttctaagatggtatca 33796419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 9704987 - 9705113
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| || ||||  ||||||| ||| ||||||| || |||||| |||| | ||||  | ||||| |  |||||||||| ||    
T  9704987 tgttaagagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggc 9705086  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  9705087 ccaaccaccatttctaagatggtatca 9705113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 13353168 - 13353294
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  13353168 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 13353267  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  13353268 ccaaccaccatttctaagatggtatca 13353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 8026389 - 8026482
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||| |||||||||    
T  8026389 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 8026482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 4868932 - 4868804
Alignment:
Q  325 gttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaa 424  Q
    ||||||||||||| |||||| || | || || |  || |||| ||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||     
T  4868932 gttgttaagagtcccacatcggacaggacatggcctggcaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 4868833  T
Q  425 gcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||||| |||||||||||||    
T  4868832 gcccaaccacgatttctaagatggtatca 4868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 29693652 - 29693712
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    |||||||||||||||||||||||||  ||||||||||||||| || ||||||| |||||||    
T  29693652 attattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatt 29693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 11548588 - 11548647
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagca 71  Q
    ||||||||||||||||||||||| || ||||||||| ||||| ||| |||||||||||||    
T  11548588 gattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 6054370 - 6054488
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||  ||||| |||||||||| || ||||||  | | ||||||| || ||||||||||| | |||||||  |||| || ||||||||||  |    
T  6054370 tgttaagagtccaacatcggataagagatggtctgacaaggtatttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgttagac 6054469  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  6054470 ccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 6543060 - 6542934
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||  |||||| |||||||||| || ||||||| ||| ||||||| || |||||| |||| | | || || ||||| |  ||||||||||  |    
T  6543060 tgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagac 6542961  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||  ||||||||||||    
T  6542960 ccaaccacgatttcaaagatggtatca 6542934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 439
Target Start/End: Complemental strand, 8567076 - 8566964
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| ||| || |||| | ||| || ||||||| ||| ||||||| ||| |||||||||| | ||||||| ||||| |  |||||||||| |    
T  8567076 ttgttaagagtcccacctcggataggtgatggtctgacaatgtgtttataagtggga-caatcctcacctcacaaaccggttttgtggggttgtgttagg 8566978  T
Q  426 cccaaccacgattt 439  Q
    ||||||||||||||    
T  8566977 cccaaccacgattt 8566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 447
Target Start/End: Original strand, 11721875 - 11721992
Alignment:
Q  330 taagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagccca 429  Q
    ||||||||||| ||||| || ||| | || | ||||||||| ||||||| || ||||||||||| | | || || ||||| |  |||||||||| |||||    
T  11721875 taagagtctcatatcagttaggagttggtctaacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggccca 11721974  T
Q  430 accacgatttttaagatg 447  Q
    |||||||||| |||||||    
T  11721975 accacgatttctaagatg 11721992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 13740916 - 13741001
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||||||| ||||||| |||||||||||||||| ||||  | ||||| |  |||||||||| |||||||||| |||| |||||    
T  13740916 tgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13741001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 13746416 - 13746501
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||||||| ||||||| |||||||||||||||| ||||  | ||||| |  |||||||||| |||||||||| |||| |||||    
T  13746416 tgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaaga 13746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 457
Target Start/End: Original strand, 21690722 - 21690819
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatcaaagc 457  Q
    ||||||||||| ||||||| || ||||||||||| | |||| ||  |||| |  |||||||||| || |||||||||||| ||| |||||||||||||    
T  21690722 tgacaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagc 21690819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 445
Target Start/End: Complemental strand, 25065209 - 25065093
Alignment:
Q  329 ttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagccc 428  Q
    ||||||||| |||||| |||| || || || ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccc 25065110  T
Q  429 aaccacgatttttaaga 445  Q
    ||| ||||||| |||||    
T  25065109 aactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 3679978 - 3680105
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||||||| || |||||| |||||| ||||||| ||| ||||| | || |||||||||   | ||||  |  |||| |  |||||||||| |    
T  3679978 ttgttaagagtctcacgtcggataagtgatagtctgacaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgttagg 3680077  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    ||||||||| |||| |||||||||||||    
T  3680078 cccaaccacaatttctaagatggtatca 3680105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 2309423 - 2309485
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||| |||||||||||   | |||||||||||||| |||||||||| |||||    
T  2309423 gattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattg 2309485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 4868694 - 4868576
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  4868694 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 4868595  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  4868594 ccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 9705221 - 9705339
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| || || | || ||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||  |    
T  9705221 tgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagac 9705320  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  9705321 ccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 458
Target Start/End: Original strand, 30256813 - 30256910
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  30256813 tgacaatatgtttataagtggg-gcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagct 30256910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 32702270 - 32702216
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatata 66  Q
    |||||||||||||| |||||||| |||||||| ||| ||||||||| ||||||||    
T  32702270 gattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 12330263 - 12330170
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || |||| |||||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||| |||||||||    
T  12330263 tgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatca 12330170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 5572501 - 5572389
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||| ||||||||||| | || ||| | |  ||||||||||| |||||||||| || |||||||| | ||||  | ||||| |  |||||||||| ||    
T  5572501 tgttaaaagtctcacatcggttaggagtttgcctgacaatttgtttataagttggggccatcctcacctcacaagtcggttttgtggggttgtgttaggc 5572402  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  5572401 ccaaccacgattt 5572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 6400873 - 6400841
Alignment:
Q  425 gcccaaccacgatttttaagatggtatcaaagc 457  Q
    |||||||||||||||||||||||||||||||||    
T  6400873 gcccaaccacgatttttaagatggtatcaaagc 6400841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 12330407 - 12330296
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| || || || ||||||| ||| ||||||| || ||||||||||  | |||| || ||||| |  |||||||||| ||    
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtggg-gcaatcctcatctcacaagccggttttgtgaggttgtgttaggc 12330309  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  12330308 ccaaccacgattt 12330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 20373624 - 20373663
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  20373624 ggttgtgttaggcccaaccacgatttataagatggtatca 20373663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 27653184 - 27653310
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || | ||||||||| | ||||  | ||||| |  | |||||||| ||    
T  27653184 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggc 27653283  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  27653284 ccaaccacgatttctaatatggtatca 27653310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 27772714 - 27772804
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggta 450  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |   ||||||||| | ||||||||||||| ||| ||||||    
T  27772714 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatatggta 27772804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 409
Target Start/End: Original strand, 15600900 - 15600985
Alignment:
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagtttt 409  Q
    |||||||||||||| |||||| | || ||| | || ||| ||||||| ||||||| || ||||||||||||| ||||  |||||||    
T  15600900 tgttgttaagagtcccacatcggttaggagttggtctgataatttgtttataagtgggggcaatcctcacttcacaagtcagtttt 15600985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 33696903 - 33696963
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||||||  |||||| |||||||| || ||||||| |||||||    
T  33696903 gattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcatt 33696963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 403
Target Start/End: Original strand, 24554317 - 24554392
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaacc 403  Q
    ||||||||||| ||||||||||| ||||| |||| ||||| | | ||| || ||| ||||||||||| |||||||||    
T  24554317 tgttaagagtcacacatcagatatgagatggtttaacaatgtatttattag-tggggcaatcctcaccttacaaacc 24554392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 27656425 - 27656537
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || | ||||||||| | |||| || ||||| |  |||||||||| ||    
T  27656425 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggc 27656524  T
Q  427 ccaaccacgattt 439  Q
    |||||||| ||||    
T  27656525 ccaaccacaattt 27656537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 8e-25; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2477701 - 2477639
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2477701 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 2477639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 11361131 - 11361193
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11361131 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 11361193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4892267 - 4892205
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  4892267 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattg 4892205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 25398303 - 25398241
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  25398303 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattg 25398241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 33584329 - 33584391
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  33584329 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattg 33584391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 3362841 - 3362774
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctata 81  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||||||    
T  3362841 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctata 3362774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37321793 - 37321856
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttt-tttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  37321793 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattg 37321856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 6043511 - 6043573
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6043511 gattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 6043573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 38899728 - 38899794
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||    
T  38899728 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctctat 38899794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 8145440 - 8145379
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  8145440 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 14138733 - 14138671
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||||    
T  14138733 gattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattg 14138671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 22913054 - 22913116
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  22913054 gattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattg 22913116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 339 - 452
Target Start/End: Original strand, 13296652 - 13296764
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatt 438  Q
    |||||| | |||||| | |||||||||||| | ||||||| || ||||||||||| | |||| |||||||| |  |||||||||| ||||||||||||||    
T  13296652 cacatcggttaagagttggtttgacaatttatttataagtgggggcaatcctcacctcacaagccagttttgtg-ggttgtgttaggcccaaccacgatt 13296750  T
Q  439 tttaagatggtatc 452  Q
    | ||||||||||||    
T  13296751 tctaagatggtatc 13296764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 12850864 - 12850804
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||    
T  12850864 ttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattg 12850804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 457
Target Start/End: Complemental strand, 6413774 - 6413644
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| |||| ||||| | |||||||| ||| ||||||| ||  |||||||||| | | || || |||||||  |||||||||||     
T  6413774 ttgttaagagtcccacatcggatatgagat-gattgacaatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaa 6413676  T
Q  426 cccaaccacgatttttaagatggtatcaaagc 457  Q
    |||||| ||||||| ||| |||||||||||||    
T  6413675 cccaacaacgatttctaatatggtatcaaagc 6413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 457
Target Start/End: Complemental strand, 6919545 - 6919416
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||||||||||  |||| ||||| | |||||||| ||| ||||||| ||  |||| ||||| | |||| | |||||| |  |||||||||| |    
T  6919545 ttgttaagagtctcacataggatatgagat-gattgacaatgtgtttataagtggggacaattctcacctcacaagc-agttttgtgaggttgtgttagg 6919448  T
Q  426 cccaaccacgatttttaagatggtatcaaagc 457  Q
    | ||||||||||||||||||||||||||||||    
T  6919447 ctcaaccacgatttttaagatggtatcaaagc 6919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 8098284 - 8098410
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||||    
T  8098284 ttgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggg-gcaatcctcacctcacaagccggttttgtggggttgtgttaag 8098382  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||| ||| |||||||||    
T  8098383 cccaaccacgatttctaatatggtatca 8098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 1564680 - 1564558
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    ||||||| |||||| |||||||||| || ||||||| ||  ||||||| || ||||||||||| | ||||  ||||||| |  |||||||||| || |||    
T  1564680 aagagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaa 1564581  T
Q  431 ccacgatttttaagatggtatca 453  Q
    ||||||||| ||||||| |||||    
T  1564580 ccacgatttctaagatgatatca 1564558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3522006 - 3522068
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||| || |||||||||||| ||||||||| |||||||||| |||||    
T  3522006 gattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattg 3522068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 4434007 - 4434069
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||| | ||||||||| ||||||||||||||||    
T  4434007 gattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcattg 4434069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 24487762 - 24487636
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| | || ||| | || ||| ||| ||| ||||||| || | ||||||||| | |||| || ||||| |  |||||||||||||    
T  24487762 tgttaagagtctcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagc 24487663  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  24487662 ccaaccacgatttctaatatggtatca 24487636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 41667110 - 41666984
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  41667110 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 41667011  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  41667010 ccaaccacgatttctaagatggtatca 41666984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 2063851 - 2063725
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| ||||  | || || ||||||| ||| ||||||| || ||||||||||||  ||||  | ||||| |  |||||||||| |    
T  2063851 ttgttaagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcctcactc-acaagtcggttttgtggggttgtgttagg 2063753  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||| |||||||||||||    
T  2063752 cccaaccacgatttctaagatggtatca 2063725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 17545685 - 17545747
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||| | ||| ||||||||||||||||    
T  17545685 gattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattg 17545747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 21210039 - 21209914
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| ||  |||| ||||| | |||| || ||||| |  ||||||||||||    
T  21210039 ttgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaag 21209940  T
Q  426 cccaaccacgatttttaagatggtat 451  Q
    |||||||||||||| ||| |||||||    
T  21209939 cccaaccacgatttctaatatggtat 21209914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 24528540 - 24528633
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||| ||||| |||||||||||||    
T  24528540 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatca 24528633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 24531599 - 24531692
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| ||  |||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  24531599 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatca 24531692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 453
Target Start/End: Original strand, 15480295 - 15480415
Alignment:
Q  333 gagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaacc 432  Q
    ||||| |||||| |||| | ||| || ||||||| ||| ||||||| || ||||||||||| | |||| |  ||||| |  |||| ||||| ||||||||    
T  15480295 gagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaacc 15480394  T
Q  433 acgatttttaagatggtatca 453  Q
    ||||||| |||||||||||||    
T  15480395 acgatttctaagatggtatca 15480415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 27133110 - 27132998
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| | || ||| | |  ||||||||||| |||||||  | ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  27133110 tgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 27133011  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  27133010 ccaaccacgattt 27132998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 24346855 - 24346728
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| ||||||  |||||| || |  ||||||| | | ||||||| || | ||| ||||| | |||| || ||||| |  ||||||||||      
T  24346855 ttgttaagagtcccacatcgaataagacatggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttaga 24346756  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||||||||||||||||||    
T  24346755 cccaaccacgatttttaagatggtatca 24346728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 12614733 - 12614795
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| || |||||||||||| ||  |||||||||||||| ||| ||||||||||||||||    
T  12614733 gattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattg 12614795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 19705870 - 19705988
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || || ||||  ||||||| ||| ||||||| || ||||||||||| ||| || || ||||| |   ||||||||| ||    
T  19705870 tgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggc 19705969  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  19705970 ccaaccacgatttctaaga 19705988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 41666874 - 41666756
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  41666874 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 41666775  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  41666774 ccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 3521866 - 3521806
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  3521866 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 3521806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 6043371 - 6043311
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  6043371 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 6043311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 10458462 - 10458409
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||    
T  10458462 gattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 42295545 - 42295670
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||||| || ||| | |  ||| ||||||| ||||||| |||||||||||||| | |||| || ||||| |   ||||||||| |    
T  42295545 ttgttaagagtcccacatcagttaggagttggcctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttagg 42295644  T
Q  426 cccaaccacgatttttaagatggtat 451  Q
    |||||| || |||| ||| |||||||    
T  42295645 cccaacgacaatttctaatatggtat 42295670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 6637804 - 6637920
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || |||||    ||||||| ||||||||||| || ||||||||||| | ||||||| |||| ||  || |||||||       
T  6637804 tgttaagagtcccacatcggttaggagatgacctgacaatgtgtctataagtgggtgcaatcctcacctcacaaaccggtttattggggctgtgttagat 6637903  T
Q  427 ccaaccacgatttttaa 443  Q
    |||||||||||||||||    
T  6637904 ccaaccacgatttttaa 6637920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 8081231 - 8081104
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggag-caatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||| |||||| |||| || || |  ||||||| ||| ||||||| || | |||||||||  | |||| || ||||| |  |||||||||| |    
T  8081231 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttagg 8081132  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||| ||||| |||||||||||||    
T  8081131 cccaaccatgatttctaagatggtatca 8081104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 13296859 - 13296978
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| | |||| | || ||| | || ||||||||||| ||||||| || |||| |||||| | ||||||| ||||| |  | ||||||||  |    
T  13296859 tgttaagagtcccgcatcggttaggagttggtctgacaatttgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagac 13296958  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  13296959 ccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 447
Target Start/End: Original strand, 15438987 - 15439074
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatg 447  Q
    ||||||| ||||||||||| || |||||| |||| | ||||  ||||||| |  |||||||||| ||| ||||||||||| |||||||    
T  15438987 tgacaatgtgtctataagtgggggcaatcatcacctcacaagtcagttttatggggttgtgttaggcctaaccacgatttataagatg 15439074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 27481881 - 27481830
Alignment:
Q  22 ccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||||||| || ||||||||||||||||||| || ||| ||||||||    
T  27481881 ccatgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 9368562 - 9368688
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||  ||||| |||| ||||| |  ||||||| ||| ||||||| |  ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  9368562 tgttaagagtcatacatcggataggagatggcgtgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 9368661  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||  |||| |||| ||||||||    
T  9368662 ccaaccataatttctaaggtggtatca 9368688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 12034657 - 12034775
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| || ||| |||||||||| |  || |||  ||| ||||| | || | ||||||||| | |||| |||||||| || | |||||||| ||    
T  12034657 tgttaagagtcccatatcggataagagatggcctgccaacgtgtttataaatgggggaaatcctcacctcacaagccagttttgtaggattgtgttaggc 12034756  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  12034757 ccaaccacgatttctaaga 12034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 20510759 - 20510641
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||| | |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | | ||||||||||| |   ||||||||| ||    
T  20510759 tgttaagagccccacatcggataggtgatggcctgacaatatgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggc 20510660  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||| |||||||| |||||    
T  20510659 ccaaacacgatttctaaga 20510641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 4892408 - 4892468
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  4892408 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 4892468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 12614597 - 12614536
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||||||  ||| ||||||||||| |  ||||||| |||||||    
T  12614597 gattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatt 12614536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 16704067 - 16704014
Alignment:
Q  325 gttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagt 378  Q
    ||||||||||||||||||| ||||| ||||| |||| ||||| ||| |||||||    
T  16704067 gttgttaagagtctcacattagataggagatggtttaacaatgtgtttataagt 16704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 33584188 - 33584128
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  33584188 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 33584128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 6637655 - 6637695
Alignment:
Q  414 ggttgtgttaagcccaaccacgattt-ttaagatggtatca 453  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  6637655 ggttgtattaagcccaaccacgatttattaagatggtatca 6637695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 25258331 - 25258287
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||||||| | |||||||||||| ||||||||||||| ||||    
T  25258331 ggttgtgttaaactcaaccacgatttctaagatggtatcagagct 25258287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 458
Target Start/End: Complemental strand, 25322121 - 25322077
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||||||| | |||||||||||| ||||||||||||| ||||    
T  25322121 ggttgtgttaaactcaaccacgatttctaagatggtatcagagct 25322077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 43117905 - 43117969
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatg 447  Q
    ||||||||||  | |||| || ||||| || |||||||||| ||||||| |||||||||||||||    
T  43117905 gcaatcctcatctcacaagccggttttatagggttgtgttaggcccaacaacgatttttaagatg 43117969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 8e-25; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 7745112 - 7745174
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7745112 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 7745174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 31078819 - 31078886
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  31078819 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcta 31078886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 10442789 - 10442851
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  10442789 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 10442851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 22199326 - 22199264
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  22199326 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 22199264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 33530688 - 33530758
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctataa 82  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |||||||    
T  33530688 gattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctctataa 33530758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 49387888 - 49387950
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  49387888 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 49387950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 36073010 - 36072950
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  36073010 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 36072950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2624902 - 2624840
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2624902 gattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattg 2624840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 21802322 - 21802384
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  21802322 gattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattg 21802384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 23964465 - 23964527
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  23964465 gattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattg 23964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24128304 - 24128242
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  24128304 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 24128242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 35788626 - 35788752
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||||||| || || |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggc 35788725  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  35788726 ccaaccacgatttctaagatggtatca 35788752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 47290131 - 47290069
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  47290131 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 47290069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 50156578 - 50156640
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  50156578 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattg 50156640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 36073415 - 36073354
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  36073415 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 458
Target Start/End: Complemental strand, 400683 - 400551
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||||||||||||||| ||||| || ||||||| ||| ||||||| || | ||||||||| | |||| || ||||| |  ||||||||||||    
T  400683 ttgttaagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaag 400584  T
Q  426 cccaaccacgatttttaagatggtatcaaagct 458  Q
    | ||||||| |||| |||  |||||||| ||||    
T  400583 ctcaaccacaatttctaacctggtatcagagct 400551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 4751509 - 4751449
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  4751509 ttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattg 4751449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 42671734 - 42671675
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagca 71  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  42671734 gattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24392732 - 24392670
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||| ||||||||||||||||    
T  24392732 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattg 24392670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 44893491 - 44893429
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  44893491 gattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattg 44893429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 35797061 - 35796968
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||| | ||||||||||||| |  |||||||||||||||||| || |||| |||||||||||||    
T  35797061 tgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatca 35796968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 35819246 - 35819119
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | |  ||||||||||| |||| || || ||||||||| | | |||| |||||||| |  |||||||||| |    
T  35819246 ttgttaagagtcccacatcggttaggagttggcctgacaatttgtttatatgtgggggcaatcctcgcctcacaagccagttttgtgaggttgtgttagg 35819147  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||||||||||||| ||||    
T  35819146 cccaaccacgatttttaagatggcatca 35819119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 37934944 - 37935003
Alignment:
Q  15 tattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||| ||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  37934944 tattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcattg 37935003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 53123096 - 53123033
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttc-ttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||||| ||||||||||||||||    
T  53123096 gattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattg 53123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 46441909 - 46441847
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| ||||||||||||||| |||||||||| | ||||||||| ||||||||||||||||    
T  46441909 gattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattg 46441847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 455
Target Start/End: Original strand, 5846112 - 5846241
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||||||||||| | || ||| | || ||||||||||| ||||||| || ||||||||||| | | || || ||||| |  ||||| |||| |    
T  5846112 ttgttaagagtctcacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttagg 5846211  T
Q  426 cccaaccacgatttttaagatggtatcaaa 455  Q
    | |||||||||||| ||| |||||||||||    
T  5846212 ctcaaccacgatttctaatatggtatcaaa 5846241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 53815013 - 53814920
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || ||||||||||| | ||||  | ||||| |  |||||||||||||||||||||||||| ||| |||||||||    
T  53815013 tgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatca 53814920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 21498321 - 21498452
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||| ||||| ||    
T  21498321 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggc 21498420  T
Q  427 ccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||||||||| ||| ||||||||| ||||    
T  21498421 ccaaccacgatttctaatatggtatcagagct 21498452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 430
Target Start/End: Complemental strand, 35645882 - 35645779
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||  ||| | ||| || ||||||| ||| ||||||| || ||||||||||| | |||| ||||||||||| |||||||||| ||    
T  35645882 tgttaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccagttttttagggttgtgttaggc 35645783  T
Q  427 ccaa 430  Q
    ||||    
T  35645782 ccaa 35645779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 458
Target Start/End: Complemental strand, 50543447 - 50543316
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||| | |||||| |||| | ||| || ||||||| ||| ||||||| || |||||||||||   |||| || ||||| |  |||||||||| ||    
T  50543447 tgttaagagccccacatcggataggtgatggtctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggc 50543348  T
Q  427 ccaaccacgatttttaagatggtatcaaagct 458  Q
    ||||||||||||| ||||||| ||||| ||||    
T  50543347 ccaaccacgatttctaagatgttatcagagct 50543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 22845564 - 22845446
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||||||| || || |  ||||||| ||| ||||||| || | ||||||||| | |||| || ||||| |  |||||||||| ||    
T  22845564 tgttaagagtcccacatcagatatgacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggc 22845465  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  22845464 ccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 50543684 - 50543558
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |   ||||||||| ||    
T  50543684 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggc 50543585  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||||||| |||||    
T  50543584 ccaaccacgatttctaagatgatatca 50543558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 1518164 - 1518257
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || ||||||||||  | |||| || ||||| |  |||||||||| ||| ||||||||||| |||||||||||||    
T  1518164 tgacaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatca 1518257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 453
Target Start/End: Complemental strand, 22231380 - 22231299
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  22231380 tataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 22231299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 37219837 - 37219890
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||||||||||||||||||||||  ||||||||||||||| || |||||||    
T  37219837 gattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 37219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 44893213 - 44893282
Alignment:
Q  12 gattattctgccatgtcattctt-aaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    ||||||||||||||||||||||| ||| |||| |||| ||||||||| || ||||||||||||| |||||    
T  44893213 gattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctctat 44893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 21498762 - 21498874
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  21498762 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 21498861  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  21498862 ccaaccacgattt 21498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 28245643 - 28245531
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  28245643 tgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 28245544  T
Q  427 ccaaccacgattt 439  Q
    ||||| |||||||    
T  28245543 ccaactacgattt 28245531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 451
Target Start/End: Complemental strand, 30566118 - 30566027
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtat 451  Q
    ||||||| ||| ||||||| |||||||| ||||| | | || |||||||| || | |||||||||||||||||||| ||| | |||||||||    
T  30566118 tgacaatgtgtttataagtgggagcaattctcacatcataagccagttttgtaggtttgtgttaagcccaaccacgttttcttagatggtat 30566027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 52827476 - 52827515
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  52827476 ggttgtgtcaagcccaaccacgatttttaagatggtatca 52827515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 17111586 - 17111656
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||| ||||  ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  17111586 gcaatcctcaccttaaaaactggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 17111656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 21684965 - 21685083
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| || || |  ||||||| ||| ||||||| |||  ||||||||| | |||| ||  |||| |  |||||||||||||    
T  21684965 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagc 21685064  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||||||| |||| |||||    
T  21685065 ccaaccacaatttctaaga 21685083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 445
Target Start/End: Original strand, 22827509 - 22827623
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    ||||||| |||||| |||| ||||| |  ||||||  ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaa 22827608  T
Q  431 ccacgatttttaaga 445  Q
    ||||||||| |||||    
T  22827609 ccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 22863441 - 22863559
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| || |  |||| |  ||||||| ||| ||||||| || |||||||||||   |||| || ||||| |  |||||||||| ||    
T  22863441 tgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggc 22863540  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  22863541 ccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 9088935 - 9088898
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgata 49  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9088935 gattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 439
Target Start/End: Original strand, 9685634 - 9685711
Alignment:
Q  362 acaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgattt 439  Q
    ||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |||||||||||||||    
T  9685634 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgattt 9685711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 25052852 - 25052945
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || | ||||| ||| | |||| || ||||| |  |||||||||| ||||||||||||||| ||| |||||||||    
T  25052852 tgacaatttgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatca 25052945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 25063434 - 25063373
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||| ||||||||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  25063434 gattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 25063373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 453
Target Start/End: Complemental strand, 40717521 - 40717432
Alignment:
Q  364 aatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||||||| || ||||||||||| | | ||  | ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  40717521 aatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 40717432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 44893072 - 44893012
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  44893072 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 44893632 - 44893692
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  44893632 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 44893692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 9685400 - 9685491
Alignment:
Q  362 acaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||| ||||||| ||  |||||||||| | ||||  | ||||| |  |||||||||| ||||||||||||||| ||| |||||||||    
T  9685400 acaatttgtttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatca 9685491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 12869293 - 12869254
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  12869293 ggttgtgttaggcccaaccacgatttctaagatggtatca 12869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 16066065 - 16066144
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgattt 439  Q
    ||||||||||| ||||||| || ||||||||||| | ||||||  ||||| || | |||||||| |||||||||| ||||    
T  16066065 tgacaatttgtttataagtgggggcaatcctcacctcacaaactggttttgtaggattgtgttaggcccaaccaccattt 16066144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 18528334 - 18528215
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||||||||||| ||| ||||| |  || |||| ||| ||||||| |  ||||||||||| | ||||| |  |||| || ||||||||||       
T  18528334 tgttaagagtctcacatcaaatacgagatggcatggcaatgtgtttataagtggcggcaatcctcacctcacaaatcgattttgtagggttgtgttagat 18528235  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  18528234 ccaaccacgatttctaagat 18528215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 458
Target Start/End: Original strand, 33107929 - 33107968
Alignment:
Q  419 tgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  33107929 tgttaaacccaaccacgatttttaatatggtatcaaagct 33107968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 36073159 - 36073217
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  36073159 ttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatatctagcatt 36073217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 453
Target Start/End: Original strand, 6218175 - 6218297
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    |||||||||||||| |||| ||||| | || ||||| ||| ||||||| || |||||| |||| | ||||  | ||||| |   |||||||||  | |||    
T  6218175 aagagtctcacatcggataggagatggcttcacaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaa 6218274  T
Q  431 ccacgatttttaagatggtatca 453  Q
    ||||||||| |||||||||||||    
T  6218275 ccacgatttctaagatggtatca 6218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 14783304 - 14783178
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| |  | ||||||||||| ||||| |  | |||||| |||| | |||| || ||||| |  |||||||||| ||    
T  14783304 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 14783205  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  14783204 ccaaccacgatttctaatatggtatca 14783178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 18528574 - 18528448
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||| ||||||||||| || | |||||||| ||||||| |||  | || | || ||||||||||| | ||||| | ||||| |  | || |||||  |    
T  18528574 tgttaaaagtctcacatcggacaggagatagtgtgacaatgtgttaacaattgggggcaatcctcacctcacaaatcggttttgtgagattttgttagac 18528475  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  18528474 ccaaccacgatttctaagatggtatca 18528448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 31254524 - 31254442
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagtttt 409  Q
    ||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| ||||||||| |||||    
T  31254524 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaaaccggtttt 31254442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 35788861 - 35788979
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| ||||  | || |  ||||||| ||| ||||||| || ||||||||||  | |||| || ||||| |  |||||||||| ||    
T  35788861 tgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggc 35788960  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  35788961 ccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 39902680 - 39902562
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| || || |  ||||||| ||| ||||||| || ||||||||||| | |||| |  ||||| |  |||||||||| ||    
T  39902680 tgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggc 39902581  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||||||| |||| |||||    
T  39902580 ccaaccaccatttctaaga 39902562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 9089076 - 9089136
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  9089076 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 9089136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 45
Target Start/End: Complemental strand, 17655495 - 17655462
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttctt 45  Q
    ||||||||||||||||||||||| ||||||||||    
T  17655495 gattattctgccatgtcattcttgaaattttctt 17655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 24128446 - 24128510
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttct 78  Q
    |||||| || ||||||||||||||| ||||||| |||||||| || ||||||| ||||||| ||||    
T  24128446 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttct 24128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 35796826 - 35796741
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||||| |||||||| |||| |||||    
T  35796826 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccatttctaaga 35796741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 36073555 - 36073615
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  36073555 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 36073615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 37836092 - 37836173
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| || ||||||||| | |||||| || ||||| |  |||||||||| ||| |||||| |||| |||||||||||||    
T  37836092 tataagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaagatggtatca 37836173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 46442050 - 46442110
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  46442050 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 46442110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 53123237 - 53123297
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  53123237 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 53123297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17655637 - 17655697
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    |||||| || |||||||||||||||  ||||||||||||||| || || |||| |||||||    
T  17655637 attattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatt 17655697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 20821940 - 20822052
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||| ||||| | |||| || ||||| |  | |||||||| ||    
T  20821940 tgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggc 20822039  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  20822040 ccaaccacgattt 20822052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 21750324 - 21750268
Alignment:
Q  397 acaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |  ||||||||||  ||||| ||||| ||||||||||||||||    
T  21750324 acaaaccagttttgtgaggttgtgttagacccaatcacgaattttaagatggtatca 21750268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 36073320 - 36073260
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||||| ||| |||||||||||  ||||||||||||||| |||||  ||| |||||||    
T  36073320 attattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcatt 36073260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 36073743 - 36073795
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgata 64  Q
    ||||||| || |||||||||||||||  |||||| ||||||||||| ||||||    
T  36073743 gattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2754782 - 2754720
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2754782 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 2754720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3574527 - 3574589
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3574527 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 3574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37217053 - 37217115
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37217053 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 37217115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11347332 - 11347271
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11347332 attattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattg 11347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3456129 - 3456067
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3456129 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattg 3456067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 48160970 - 48160908
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48160970 gattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattg 48160908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 6041949 - 6041887
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6041949 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 6041887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 19650900 - 19650962
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  19650900 gattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattg 19650962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 453
Target Start/End: Original strand, 22729064 - 22729193
Alignment:
Q  324 tgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    ||||||| |||||| |||||| |||| ||||| || ||||||| ||| || |||| || ||||||||||||| |||| || ||||| |  ||||||||||    
T  22729064 tgttgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtta 22729163  T
Q  424 agcccaaccacgatttttaagatggtatca 453  Q
     |||||||||| |||| |||||||||||||    
T  22729164 ggcccaaccacaatttctaagatggtatca 22729193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 42297407 - 42297350
Alignment:
Q  23 catgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctat 80  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42297407 catgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctctat 42297350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 453
Target Start/End: Original strand, 11589751 - 11589878
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    ||||||||||||||||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |    
T  11589751 ttgttaagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 11589850  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    |||||||||||||| ||| |||||||||    
T  11589851 cccaaccacgatttctaatatggtatca 11589878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 22426344 - 22426411
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttcta 79  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||| ||||    
T  22426344 gattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctcta 22426411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3137414 - 3137476
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  3137414 gattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 3137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8320584 - 8320646
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  8320584 gattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattg 8320646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 30385076 - 30385014
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||||| || |||||||||||||||||||||| |||||| |||||||||    
T  30385076 gattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattg 30385014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 33113858 - 33113796
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||    
T  33113858 gattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattg 33113796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 33145777 - 33145716
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  33145777 gattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattg 33145716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 37522118 - 37522056
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  37522118 gattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattg 37522056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 1723160 - 1723067
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  1723160 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 1723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 451
Target Start/End: Complemental strand, 23708341 - 23708217
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| || ||| |||| ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  | |||||||| |     
T  23708341 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggt 23708242  T
Q  427 ccaaccacgatttttaagatggtat 451  Q
    |||| ||| ||||||||||||||||    
T  23708241 ccaatcacaatttttaagatggtat 23708217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 451
Target Start/End: Complemental strand, 23726797 - 23726673
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| || ||| |||| ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  | |||||||| |     
T  23726797 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggt 23726698  T
Q  427 ccaaccacgatttttaagatggtat 451  Q
    |||| ||| ||||||||||||||||    
T  23726697 ccaatcacaatttttaagatggtat 23726673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 451
Target Start/End: Complemental strand, 23745253 - 23745129
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||| || ||| |||| ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  | |||||||| |     
T  23745253 tgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggt 23745154  T
Q  427 ccaaccacgatttttaagatggtat 451  Q
    |||| ||| ||||||||||||||||    
T  23745153 ccaatcacaatttttaagatggtat 23745129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 9797029 - 9797091
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||    
T  9797029 gattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattg 9797091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 16239558 - 16239684
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| || || |  ||||||| ||| ||||||| || |||| |||||| | |||| || ||||| |  | |||||||| ||    
T  16239558 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggc 16239657  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  16239658 ccaaccacgatttctaagatggtatca 16239684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 30179821 - 30179699
Alignment:
Q  331 aagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaa 430  Q
    ||||||| |||||||||||||||||    ||||||| ||| ||||||| || | ||||||||| | ||||  ||||||| || | || ||||| ||||||    
T  30179821 aagagtcccacatcagataagagatgacctgacaatgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaa 30179722  T
Q  431 ccacgatttttaagatggtatca 453  Q
    ||||||||| |||||||||||||    
T  30179721 ccacgatttataagatggtatca 30179699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 34482910 - 34482972
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||| |||| |||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  34482910 gattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 34482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 36865027 - 36865089
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||  || |||||||||||||    
T  36865027 gattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattg 36865089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 20327968 - 20327840
Alignment:
Q  325 gttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaa 424  Q
    ||||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||     
T  20327968 gttgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 20327869  T
Q  425 gcccaaccacgatttttaagatggtatca 453  Q
    ||||||||| ||||| ||| |||||||||    
T  20327868 gcccaaccatgatttctaatatggtatca 20327840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 42921197 - 42921154
Alignment:
Q  23 catgtcattcttaaaattttcttgataaaatcttttttgatata 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  42921197 catgtcattcttaaaattttcttgataaaatctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 457
Target Start/End: Complemental strand, 12930245 - 12930115
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||| ||||||||||| ||||||||||    ||||||| |||  ||| || ||  |||| ||||||| |||| || ||||| |  |||||||||| ||    
T  12930245 tgttaaaagtctcacatcggataagagatgacctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggc 12930146  T
Q  427 ccaaccacgatttttaagatggtatcaaagc 457  Q
    |||||||| |||| |||||||||||||||||    
T  12930145 ccaaccaccatttctaagatggtatcaaagc 12930115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 26612848 - 26612794
Alignment:
Q  14 ttattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatata 68  Q
    ||||||||||||||||||||| || |||| || ||||||||||||||||||||||    
T  26612848 ttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatata 26612794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 35038545 - 35038419
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || ||||||||||| | |||| |  ||||| |  |||||||||| ||    
T  35038545 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggc 35038446  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||||| || |||||||||||||    
T  35038445 ccaaccacgacttctaagatggtatca 35038419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 54368483 - 54368609
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| ||||  |||| |  ||| ||| ||| ||||||| || ||||||||||| | |||| || ||||| |  ||||||||||  |    
T  54368483 tgttaagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagac 54368582  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| |||||||||||||    
T  54368583 ccaaccacgatttctaagatggtatca 54368609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 54567892 - 54567985
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || | ||||||||| | |||| || ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  54567892 tgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 54567985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 451
Target Start/End: Complemental strand, 24063766 - 24063654
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatt 438  Q
    |||||||| || ||| |||| ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  | |||||||| | |||| ||| |||    
T  24063766 cacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatt 24063667  T
Q  439 tttaagatggtat 451  Q
    |||||||||||||    
T  24063666 tttaagatggtat 24063654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 453
Target Start/End: Complemental strand, 16927067 - 16926940
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| ||||  | || |  ||||||| ||| ||||||| || | ||||||||  | |||| || ||||| |  ||||||||||||    
T  16927067 ttgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaag 16926968  T
Q  426 cccaaccacgatttttaagatggtatca 453  Q
    | |||||||||||| |||||||||||||    
T  16926967 ctcaaccacgatttctaagatggtatca 16926940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 9272928 - 9273054
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| | || ||  | |  ||| ||||||| ||||||| || |||| |||||| | |||| || ||||| |  |||||||||||||    
T  9272928 tgttaagagtctcacatcggttaggaattggcctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagc 9273027  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| ||| |||||||||    
T  9273028 ccaaccaccatttctaatatggtatca 9273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 449
Target Start/End: Original strand, 31317196 - 31317317
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| ||||||| ||||  || |||| ||| ||||||| || ||||||||||| | |||| || ||||| |  | |||||||| ||    
T  31317196 tgttaagagtcccacatcggataagacatagcatggcaatgtgtttataagtggg-gcaatcctcacctcacaagccggttttgtgggattgtgttaggc 31317294  T
Q  427 ccaaccacgatttttaagatggt 449  Q
     |||||||||||| |||||||||    
T  31317295 tcaaccacgatttctaagatggt 31317317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 33839596 - 33839534
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| ||||| ||||||||| |||| |||||||||||||| || ||||||| |||||    
T  33839596 gattattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattg 33839534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 35038311 - 35038193
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| |||| | ||| |  ||||||| ||| ||||||| || | ||||||||| | |||| || ||||| |  |||||||||| ||    
T  35038311 tgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggc 35038212  T
Q  427 ccaaccacgatttttaaga 445  Q
    ||||||||||||| |||||    
T  35038211 ccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 4155336 - 4155417
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| || ||||||||||| | | || || ||||| |  |||||||||| ||||||||||||||| |||||||||||||    
T  4155336 tataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 4155417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 4155559 - 4155644
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||| ||||||| ||  |||||||||| | | || || |||||||| |||||||||| ||||||||||||||| |||||    
T  4155559 tgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgttaggcccaaccacgatttctaaga 4155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 457
Target Start/End: Complemental strand, 13574993 - 13574908
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatcaaagc 457  Q
    ||||||| || | ||||||||| | |||| |||||||| |  |||||||||| |||||||||| |||| ||| |||||||||||||    
T  13574993 tataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagc 13574908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 423
Target Start/End: Complemental strand, 14839855 - 14839758
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtta 423  Q
    ||||||||||| ||||||||||||   ||| || ||| ||| | | |||||||||| ||||||||||| ||||||  | ||||| |||||||||||||    
T  14839855 ttgttaagagtttcacatcagatagttgatggtctgataatgtatttataagttggggcaatcctcacgttacaagtcggttttgtatggttgtgtta 14839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 37522259 - 37522319
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  37522259 gattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 37522319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 42420836 - 42420909
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||| ||||||||| |||| ||||||||||||||| || |||||||| | ||| | ||||||||| |||||    
T  42420836 tataagtgggagcaatcttcaccttacaaaccagttttgtagggttgtgtcaggcctatccacgatttctaaga 42420909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 45828031 - 45828112
Alignment:
Q  372 tataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||| | |||| || ||||| |  |||||||||| |||| ||||| |||| |||||||||||||    
T  45828031 tataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatca 45828112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Original strand, 9273162 - 9273278
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||  | || ||||||||||| ||||||| || ||||||||||||| |||| |  ||||| |  |||||||||| ||    
T  9273162 tgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtgggggcaatcctcacttcacaagctggttttgtggggttgtgttaggc 9273261  T
Q  427 ccaaccacgatttttaa 443  Q
     ||||||| ||||||||    
T  9273262 tcaaccaccatttttaa 9273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 20303181 - 20303061
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||| || |||||| |||| || || |  ||||||| | | ||||||| || ||||||||||| | ||||||| ||||| |  | |||||||| ||    
T  20303181 tgttaagaatcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggc 20303082  T
Q  427 ccaaccacgatttttaagatg 447  Q
     ||||||||||||||||||||    
T  20303081 tcaaccacgatttttaagatg 20303061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 20327731 - 20327615
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||| || |||||| |||| || || |  ||||||| | | ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  20327731 tgttaagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 20327632  T
Q  427 ccaaccacgatttttaa 443  Q
    |||||||||||||||||    
T  20327631 ccaaccacgatttttaa 20327615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 451
Target Start/End: Complemental strand, 23691529 - 23691417
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatt 438  Q
    |||||||| || ||| |||| ||||||||||| ||||||| || ||||||||||| | |||| || | ||| |  | |||||||| | |||| ||| |||    
T  23691529 cacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatt 23691430  T
Q  439 tttaagatggtat 451  Q
    |||||||||||||    
T  23691429 tttaagatggtat 23691417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 47738169 - 47738117
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||||||||| |||||||| ||  |||||||||||||||||| |||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 451
Target Start/End: Original strand, 17638235 - 17638325
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtat 451  Q
    ||||||||||| ||||||| || ||||||||||| | |||| |  |||||    |||||||||| ||||||||||||||| |||||||||||    
T  17638235 tgacaatttgtttataagtggg-gcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggtat 17638325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 39620293 - 39620412
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    |||||||||||||||||| |||| | |||    ||||||| ||| ||||||| || | || || ||| | | || |||||||| |  |||||||||||||    
T  39620293 tgttaagagtctcacatcggataggtgatgacctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaagc 39620392  T
Q  427 ccaaccacgatttttaagat 446  Q
    ||||||||||||| ||||||    
T  39620393 ccaaccacgatttctaagat 39620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 41224294 - 41224239
Alignment:
Q  16 attctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagca 71  Q
    ||||| ||||||||||||| || ||||||||| ||||||||| || ||||||||||    
T  41224294 attctaccatgtcattcttgaatttttcttgagaaaatctttcttaatatatagca 41224239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 453
Target Start/End: Complemental strand, 45139081 - 45138962
Alignment:
Q  334 agtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaacca 433  Q
    |||| |||||| |||||||||| |  ||||||  |||  |||||| || ||||||||||| | |||| || ||||| |  |||||||| |  ||||||||    
T  45139081 agtcccacatctgataagagatggcctgacaacgtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaacca 45138982  T
Q  434 cgatttttaagatggtatca 453  Q
    |||||| |||||||||||||    
T  45138981 cgatttctaagatggtatca 45138962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 446
Target Start/End: Original strand, 8018972 - 8019054
Alignment:
Q  364 aatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagat 446  Q
    ||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| |||||||||| |||| ||||||    
T  8018972 aatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 8362045 - 8362107
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| || ||||||||| |   | ||| ||||||||||||||||    
T  8362045 gattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattg 8362107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 17638408 - 17638490
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||||||| ||||||| || ||||||||||  | |||| || |||||  |||||||||||| |||||| ||||||||||||||    
T  17638408 tgacaatttgtttataagtggg-gcaatcctcatctcacaagccggtttt--atggttgtgttaggcccaatcacgatttttaaga 17638490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24343612 - 24343550
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||| | | | || || ||||||||||||||||||| || |||||||||||||    
T  24343612 gattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcattg 24343550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  40 tttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 42921339 - 42921397
Alignment:
Q  20 tgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttct 78  Q
    ||||||||||||||||||  ||||||||||||||| || || |||| ||||||| ||||    
T  42921339 tgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttttct 42921397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 3137273 - 3137213
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 3137213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 6487451 - 6487334
Alignment:
Q  326 ttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaag 425  Q
    |||||||||||| |||||| | || ||| | |  ||||||||||| ||||||| |  | ||||||||| | |||| || ||||| |  |||||| ||| |    
T  6487451 ttgttaagagtcccacatcggttaggagttggcctgacaatttgtttataagtggaggtaatcctcacctcacaagccggttttatggggttgttttagg 6487352  T
Q  426 cccaaccacgatttttaa 443  Q
    ||||||||||||||||||    
T  6487351 cccaaccacgatttttaa 6487334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 34482747 - 34482687
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  34482747 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 34482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 453
Target Start/End: Original strand, 39269331 - 39269424
Alignment:
Q  360 tgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    ||||||| ||| ||||||| || ||||||||||| | |||| || |||||    | |||||||| ||| ||| |||||||||||||||||||||    
T  39269331 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagatggtatca 39269424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 40328037 - 40328098
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| || |||||||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  40328037 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 40328098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 41883223 - 41883260
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgata 49  Q
    ||||||||||||||||||||||| || |||||||||||    
T  41883223 gattattctgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 47738317 - 47738370
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||| ||||||||||||||| ||  ||||||||||||||| || |||||||    
T  47738317 gattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatat 47738370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 458
Target Start/End: Original strand, 21833402 - 21833446
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatcaaagct 458  Q
    |||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  21833402 ggttgtgttaggcccaaccacgatttctaacatggtatcagagct 21833446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 33839741 - 33839797
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatata 68  Q
    ||||||| || |||||||||||| ||  ||||||||||||||| || ||||||||||    
T  33839741 gattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 50052600 - 50052544
Alignment:
Q  383 gcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgattt 439  Q
    ||||||||||||| |||| || ||||| |  |||||||||| |||||||||||||||    
T  50052600 gcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgattt 50052544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 4461 - 4390
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttctataat 83  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  4461 gattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctctttaat 4390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 4602 - 4662
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| |||||| ||||||||||| ||||||| |||||||| || ||||||| |||||||    
T  4602 gattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcatt 4662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 3133 - 3071
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  3133 gattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattg 3071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 327 - 439
Target Start/End: Original strand, 6241 - 6353
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||||||||||||||||| ||||||| ||| ||||||| || ||||||||||| | |||| ||  |||| |  |||||||||| ||    
T  6241 tgttaagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggc 6340  T
Q  427 ccaaccacgattt 439  Q
    |||||||||||||    
T  6341 ccaaccacgattt 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 12907 - 12845
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||    
T  12907 gattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattg 12845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 13049 - 13113
Alignment:
Q  13 attattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattgttct 78  Q
    |||||| || ||||||||||||||| ||||||| |||||||| || ||||||| ||||||| ||||    
T  13049 attattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttttct 13113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 11686 - 11624
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  11686 gattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattg 11624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 11827 - 11879
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatat 65  Q
    ||||||| |||||||||||||||||| ||||||| |||||||| || |||||||    
T  11827 gattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 11879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 41076 - 41014
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||    
T  41076 gattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattg 41014  T

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Target: scaffold0085 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 47915 - 47853
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcattg 74  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  47915 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattg 47853  T

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Target: scaffold0692 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 453
Target Start/End: Complemental strand, 5870 - 5745
Alignment:
Q  328 gttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcc 427  Q
    |||||||||| |||||| ||||||| ||||| ||||||| ||| ||||||| || ||||||||||  | |||| || |||||    |||||||||| |||    
T  5870 gttaagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcc 5771  T
Q  428 caaccacgatttttaagatggtatca 453  Q
    |||||||||||| |||||||||||||    
T  5770 caaccacgatttctaagatggtatca 5745  T

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Target: scaffold0692; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 433
Target Start/End: Complemental strand, 5631 - 5555
Alignment:
Q  357 gtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaacca 433  Q
    |||||||||| ||| ||||||| || ||||||||||||| |||| || |||||    |||||||||| |||||||||    
T  5631 gtttgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaacca 5555  T

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Target: scaffold0519 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 1883 - 2009
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || || ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  1883 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 1982  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    |||||||| |||| |||||||||||||    
T  1983 ccaaccaccatttctaagatggtatca 2009  T

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Target: scaffold0519; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 2118 - 2236
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| || | || || |  ||||||| ||| ||||||| || ||||||||||| |||||| || ||||| |  |||||||||| ||    
T  2118 tgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 2217  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||||||| |||| |||||    
T  2218 ccaaccaccatttctaaga 2236  T

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Target: scaffold0228 (Bit Score: 47; Significance: 1e-17; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 8467 - 8413
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatata 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  8467 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

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Target: scaffold0228; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 16049 - 15995
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatata 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  16049 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

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Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26001 - 25947
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatata 66  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  26001 gattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

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Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 16190 - 16250
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  16190 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 16250  T

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Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 26142 - 26202
Alignment:
Q  12 gattattctgccatgtcattcttaaaattttcttgataaaatcttttttgatatatagcatt 73  Q
    ||||||| ||||||||||||||| || ||||||| |||||||| || ||||||| |||||||    
T  26142 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 26202  T

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Target: scaffold0092 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 453
Target Start/End: Original strand, 5616 - 5748
Alignment:
Q  321 aattgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtg 420  Q
    |||| |||||||||||| |||||||||||  |||| |  ||||||| ||| ||||||| || | ||||||||  |||||| || ||||| |  |||||||    
T  5616 aattattgttaagagtcccacatcagatagaagatggcatgacaatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtg 5715  T
Q  421 ttaagcccaaccacgatttttaagatggtatca 453  Q
    |||  |||||||||||||| |||||||||||||    
T  5716 ttagacccaaccacgatttctaagatggtatca 5748  T

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Target: scaffold0181 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 445
Target Start/End: Original strand, 20902 - 21024
Alignment:
Q  323 ttgttgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgtt 422  Q
    |||||||||||||||| |||||||  | ||||| || ||||||| | | |||||||    | ||||||||| | |||| || ||||| |  |||||||||    
T  20902 ttgttgttaagagtctgacatcagtaaggagatggtctgacaatgtatttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgtt 21001  T
Q  423 aagcccaaccacgatttttaaga 445  Q
    ||||||||||||||||| |||||    
T  21002 aagcccaaccacgatttctaaga 21024  T

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Target: scaffold0083 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 453
Target Start/End: Original strand, 51233 - 51329
Alignment:
Q  357 gtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||| ||||||| || ||||||||||| | ||||  ||||||| |  |||||||||| || ||| ||| |||| |||||||||||||    
T  51233 gtttgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgttatgctcaatcacaatttctaagatggtatca 51329  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Original strand, 81896 - 81935
Alignment:
Q  414 ggttgtgttaagcccaaccacgatttttaagatggtatca 453  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  81896 ggttgtgttaggcccaaccacgatttctaagatggtatca 81935  T

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Target: scaffold0048; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 82043 - 82161
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| ||||||||| | || || |  ||||||| ||| ||||| | || | ||||||||  ||||||||| ||||| |  |||||||||| ||    
T  82043 tgttaagagtcccacatcagacatgacatggcctgacaatgtgtatataaatgggggaaatcctcaaattacaaaccggttttgtggggttgtgttaggc 82142  T
Q  427 ccaaccacgatttttaaga 445  Q
    |||||||| |||| |||||    
T  82143 ccaaccacaatttctaaga 82161  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 12615 - 12738
Alignment:
Q  328 gttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcc 427  Q
    |||||||||| ||  || |||| | ||| |||||||||| | | |||| || || ||||||||||| | ||||  |  |||| | ||||||||||| |||    
T  12615 gttaagagtcccatgtcggataggtgatggtttgacaatgtatttatatgtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcc 12714  T
Q  428 caaccacgatttttaagatggtat 451  Q
    ||||||| ||||||||||||||||    
T  12715 caaccacaatttttaagatggtat 12738  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 453
Target Start/End: Original strand, 14282 - 14396
Alignment:
Q  339 cacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagcccaaccacgatt 438  Q
    |||||| |||| | ||| || ||||||| ||| ||||||| ||  ||||| |||| | |||| || ||||| |  |||||||||| ||||||||||| ||    
T  14282 cacatcggataggtgatggtctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttt 14381  T
Q  439 tttaagatggtatca 453  Q
    | |||||||||||||    
T  14382 tctaagatggtatca 14396  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 453
Target Start/End: Original strand, 56426 - 56552
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||| |||||| | || ||| |  | ||||||||||| ||||| |  | |||||| |||| | |||| || ||||| |  |||||||||| ||    
T  56426 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 56525  T
Q  427 ccaaccacgatttttaagatggtatca 453  Q
    ||||||||||||| ||| |||||||||    
T  56526 ccaaccacgatttctaatatggtatca 56552  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 121610 - 121639
Alignment:
Q  416 ttgtgttaagcccaaccacgatttttaaga 445  Q
    ||||||||||||||||||||||||||||||    
T  121610 ttgtgttaagcccaaccacgatttttaaga 121639  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 439
Target Start/End: Complemental strand, 4546 - 4434
Alignment:
Q  327 tgttaagagtctcacatcagataagagatagtttgacaatttgtctataagttggagcaatcctcactttacaaaccagttttttatggttgtgttaagc 426  Q
    ||||||||||  |||||||| || ||| | |  ||||||||||| ||||||| || ||||||||||| | |||| || ||||| |  |||||||||| ||    
T  4546 tgttaagagtgccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 4447  T
Q  427 ccaaccacgattt 439  Q
     |||||| |||||    
T  4446 tcaaccatgattt 4434  T

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