View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14323_low_47 (Length: 265)
Name: NF14323_low_47
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14323_low_47 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 43602496 - 43602728
Alignment:
| Q |
20 |
tacacatcaaaccattgatcatgaaatgatctttcttttgaagagaaataaaacttactaagaaatatcaatggactctcccaactcacctgattttgct |
119 |
Q |
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| T |
43602496 |
tacacatcaaaccattgatcatgaaatgatctttcttttgaagagaaatacaacttactaagaaatatcaatggactctcccaactcacctgattttgct |
43602595 |
T |
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| Q |
120 |
tttacatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaactttct |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43602596 |
tttacatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaactttct |
43602695 |
T |
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| Q |
220 |
cacgcagtcttcaaaactctccagtttcatctc |
252 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
43602696 |
cacgcagtcttcaaaactctccagtttcatctc |
43602728 |
T |
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