View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14323_low_48 (Length: 256)
Name: NF14323_low_48
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14323_low_48 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 45130639 - 45130869
Alignment:
| Q |
13 |
atgtaggatgagaaaattgtcgctgttatcaggctattgaaaaaagtatattcatgctgaagagggaattctaccattaaactttatttcacacaagagt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45130639 |
atgtaggatgagaaaattgtcgctgttatcaggctattgaaaaaagtatattcatgctgaagagggaattctaccattaaactttatttcacacaagagt |
45130738 |
T |
|
| Q |
113 |
atgnnnnnnntagtcacagtctcacacaatcagagaaagagacagagagatcaggtatcaaacaaagcatatcatatcctaacaagacatgttctaactt |
212 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45130739 |
atgaaaaaaatagtcacagtctcacacaatcagagaaagagacagagagatcaggtatcaaacaaagcatatcatatcctaacaagacatgttctaactt |
45130838 |
T |
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| Q |
213 |
acttggaagcaaaggttaggcagttctttat |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
45130839 |
acttggaagcaaaggttaggcagttctttat |
45130869 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 47622538 - 47622768
Alignment:
| Q |
13 |
atgtaggatgagaaaattgtcgctgttatcaggctattgaaaaaagtatattcatgctgaagagggaattctaccattaaactttatttcacacaagagt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47622538 |
atgtaggatgagaaaattgtcgctgttatcaggctattgaaaaaagtatattcatgctgaagagggaattctaccattaaactttatttcacacaagagt |
47622637 |
T |
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| Q |
113 |
atgnnnnnnntagtcacagtctcacacaatcagagaaagagacagagagatcaggtatcaaacaaagcatatcatatcctaacaagacatgttctaactt |
212 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
47622638 |
atgaaaaaaatagtcacagtctcacacaatcagagaaagagacagagagatcagttatcaaacaaagcatatcatatcttaacaagacatgttctaactt |
47622737 |
T |
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| Q |
213 |
acttggaagcaaaggttaggcagttctttat |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
47622738 |
acttggaagcaaaggttaggcagttctttat |
47622768 |
T |
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Back To:
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