View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14323_low_50 (Length: 247)

Name: NF14323_low_50
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14323_low_50
NF14323_low_50
[»] chr8 (34 HSPs)
chr8 (138-230)||(14747761-14747853)
chr8 (19-138)||(13225067-13225185)
chr8 (16-139)||(41681132-41681254)
chr8 (13-139)||(19176712-19176837)
chr8 (13-144)||(11656448-11656578)
chr8 (69-139)||(33742920-33742990)
chr8 (19-138)||(44831246-44831364)
chr8 (23-139)||(19176288-19176403)
chr8 (13-138)||(9930079-9930203)
chr8 (70-139)||(34541026-34541095)
chr8 (19-137)||(41681562-41681679)
chr8 (19-136)||(31133648-31133764)
chr8 (19-138)||(11656885-11657003)
chr8 (15-139)||(12571861-12571984)
chr8 (18-134)||(33328161-33328276)
chr8 (19-134)||(9928912-9929026)
chr8 (13-139)||(31133218-31133343)
chr8 (69-146)||(11336999-11337076)
chr8 (13-139)||(44831667-44831792)
chr8 (69-137)||(9178112-9178180)
chr8 (19-134)||(12572279-12572393)
chr8 (146-208)||(30686541-30686603)
chr8 (69-133)||(13224645-13224708)
chr8 (13-135)||(33328562-33328683)
chr8 (69-138)||(8074028-8074097)
chr8 (72-140)||(4629794-4629862)
chr8 (104-139)||(9177665-9177700)
chr8 (92-138)||(10919686-10919732)
chr8 (69-134)||(4630263-4630328)
chr8 (113-143)||(10046659-10046689)
chr8 (81-139)||(10918124-10918182)
chr8 (146-187)||(30686728-30686769)
chr8 (13-50)||(33743341-33743378)
chr8 (87-139)||(35427308-35427360)
[»] scaffold0295 (2 HSPs)
scaffold0295 (13-139)||(4791-4916)
scaffold0295 (69-135)||(5268-5334)
[»] chr7 (27 HSPs)
chr7 (13-139)||(19830418-19830543)
chr7 (19-144)||(38859069-38859193)
chr7 (13-137)||(19590525-19590648)
chr7 (19-145)||(19590953-19591078)
chr7 (13-138)||(37786766-37786890)
chr7 (13-134)||(29100273-29100393)
chr7 (13-139)||(35289323-35289448)
chr7 (70-138)||(19830897-19830965)
chr7 (13-137)||(32005036-32005159)
chr7 (69-139)||(34533789-34533859)
chr7 (13-140)||(34534213-34534339)
chr7 (13-138)||(38858642-38858766)
chr7 (72-139)||(2658837-2658904)
chr7 (69-139)||(32004612-32004682)
chr7 (13-139)||(2659262-2659387)
chr7 (20-137)||(35288903-35289019)
chr7 (19-144)||(37787195-37787319)
chr7 (69-139)||(4478177-4478247)
chr7 (13-134)||(4641443-4641563)
chr7 (19-139)||(23952728-23952848)
chr7 (19-124)||(29099863-29099967)
chr7 (13-139)||(28583437-28583562)
chr7 (69-139)||(38160949-38161019)
chr7 (69-134)||(4641921-4641983)
chr7 (13-131)||(23953151-23953268)
chr7 (69-136)||(28584399-28584466)
chr7 (81-138)||(49064033-49064090)
[»] chr2 (37 HSPs)
chr2 (13-139)||(22374318-22374443)
chr2 (13-137)||(28616613-28616736)
chr2 (19-141)||(22374753-22374874)
chr2 (13-139)||(26538501-26538626)
chr2 (13-138)||(40027139-40027263)
chr2 (13-139)||(11090519-11090644)
chr2 (13-138)||(26538096-26538220)
chr2 (69-139)||(11090997-11091067)
chr2 (13-139)||(239351-239475)
chr2 (13-139)||(1978106-1978231)
chr2 (70-135)||(40815347-40815412)
chr2 (13-139)||(40815767-40815892)
chr2 (13-138)||(20444748-20444872)
chr2 (19-139)||(1978537-1978656)
chr2 (19-138)||(18450829-18450947)
chr2 (69-139)||(18451308-18451378)
chr2 (69-139)||(20440508-20440578)
chr2 (13-134)||(14432145-14432265)
chr2 (13-137)||(43058333-43058456)
chr2 (19-134)||(40027568-40027682)
chr2 (69-139)||(43058809-43058879)
chr2 (69-138)||(28617091-28617160)
chr2 (19-148)||(28847123-28847251)
chr2 (13-137)||(35779708-35779831)
chr2 (69-145)||(35781140-35781216)
chr2 (69-136)||(239829-239896)
chr2 (19-139)||(7446774-7446893)
chr2 (16-131)||(3025472-3025586)
chr2 (69-135)||(14432618-14432684)
chr2 (69-138)||(7446341-7446410)
chr2 (69-134)||(8425358-8425423)
chr2 (19-137)||(3025891-3026006)
chr2 (69-135)||(8972239-8972305)
chr2 (70-135)||(15551501-15551566)
chr2 (72-134)||(8425840-8425902)
chr2 (69-135)||(15552531-15552596)
chr2 (86-138)||(42192738-42192790)
[»] scaffold0273 (1 HSPs)
scaffold0273 (13-140)||(4629-4755)
[»] chr6 (34 HSPs)
chr6 (13-139)||(2319670-2319795)
chr6 (13-137)||(10900352-10900475)
chr6 (19-139)||(12935155-12935274)
chr6 (13-139)||(20741098-20741223)
chr6 (13-138)||(15828063-15828187)
chr6 (13-139)||(18257135-18257260)
chr6 (13-137)||(11277004-11277127)
chr6 (19-139)||(11445415-11445534)
chr6 (19-139)||(22219781-22219900)
chr6 (19-139)||(23075556-23075675)
chr6 (69-139)||(1149463-1149533)
chr6 (19-134)||(10899942-10900056)
chr6 (13-139)||(11444985-11445110)
chr6 (72-138)||(23073998-23074064)
chr6 (13-136)||(31470738-31470860)
chr6 (13-139)||(12935579-12935704)
chr6 (13-137)||(1149854-1149977)
chr6 (19-137)||(18257565-18257682)
chr6 (69-134)||(18504922-18504987)
chr6 (69-138)||(20741581-20741650)
chr6 (69-138)||(31470314-31470383)
chr6 (17-134)||(2322644-2322760)
chr6 (13-136)||(18505341-18505463)
chr6 (16-139)||(28472635-28472757)
chr6 (16-139)||(29859824-29859946)
chr6 (70-136)||(15827639-15827705)
chr6 (69-135)||(29033436-29033502)
chr6 (13-137)||(4811372-4811495)
chr6 (69-135)||(29035114-29035180)
chr6 (16-139)||(18296143-18296265)
chr6 (13-134)||(3835148-3835268)
chr6 (69-137)||(4811733-4811801)
chr6 (69-138)||(11276589-11276658)
chr6 (81-137)||(22534214-22534270)
[»] chr5 (40 HSPs)
chr5 (13-139)||(2865177-2865302)
chr5 (17-139)||(18183395-18183516)
chr5 (13-137)||(5819351-5819474)
chr5 (13-140)||(24362258-24362384)
chr5 (13-137)||(8647438-8647561)
chr5 (13-137)||(19359136-19359259)
chr5 (19-139)||(19359564-19359683)
chr5 (13-139)||(164613-164738)
chr5 (13-138)||(29455164-29455288)
chr5 (19-144)||(8647866-8647990)
chr5 (19-139)||(18182968-18183087)
chr5 (69-139)||(5818927-5818997)
chr5 (69-139)||(15372350-15372420)
chr5 (16-139)||(15708969-15709091)
chr5 (69-139)||(24331557-24331627)
chr5 (13-139)||(8460928-8461053)
chr5 (69-138)||(8461408-8461477)
chr5 (70-137)||(164191-164258)
chr5 (69-139)||(14215720-14215790)
chr5 (147-224)||(27056558-27056635)
chr5 (19-135)||(2864756-2864871)
chr5 (69-136)||(4222199-4222266)
chr5 (70-137)||(7349495-7349562)
chr5 (69-135)||(14215243-14215309)
chr5 (19-138)||(29454739-29454857)
chr5 (72-139)||(14464000-14464067)
chr5 (72-138)||(16018588-16018654)
chr5 (16-137)||(4219663-4219783)
chr5 (69-138)||(25000566-25000635)
chr5 (69-137)||(7348559-7348627)
chr5 (69-136)||(6018315-6018382)
chr5 (72-139)||(16019067-16019134)
chr5 (13-131)||(24361843-24361960)
chr5 (13-115)||(25000112-25000213)
chr5 (19-137)||(15709397-15709513)
chr5 (69-137)||(4623148-4623216)
chr5 (69-135)||(15371873-15371938)
chr5 (69-131)||(24325218-24325280)
chr5 (84-148)||(4967264-4967327)
chr5 (69-131)||(6019248-6019309)
[»] chr3 (49 HSPs)
chr3 (13-139)||(31779074-31779199)
chr3 (19-139)||(4275792-4275911)
chr3 (13-139)||(20840558-20840683)
chr3 (16-138)||(27393660-27393781)
chr3 (13-137)||(39555999-39556122)
chr3 (13-139)||(5136978-5137103)
chr3 (13-139)||(48452987-48453112)
chr3 (69-137)||(32535440-32535508)
chr3 (13-134)||(41046703-41046823)
chr3 (19-144)||(43973868-43973992)
chr3 (19-139)||(17464489-17464608)
chr3 (19-138)||(30098191-30098309)
chr3 (16-139)||(30104480-30104602)
chr3 (19-138)||(20840989-20841107)
chr3 (13-139)||(24300978-24301103)
chr3 (15-137)||(29801356-29801477)
chr3 (19-137)||(37727358-37727475)
chr3 (69-138)||(39555577-39555646)
chr3 (13-138)||(23644461-23644585)
chr3 (13-137)||(43973441-43973564)
chr3 (69-139)||(29801893-29801963)
chr3 (19-138)||(31778652-31778770)
chr3 (69-139)||(37222048-37222118)
chr3 (72-137)||(25853234-25853299)
chr3 (13-138)||(37726928-37727052)
chr3 (13-134)||(25612399-25612519)
chr3 (72-139)||(5137461-5137528)
chr3 (13-133)||(22425235-22425354)
chr3 (13-135)||(25853649-25853770)
chr3 (19-134)||(32534962-32535076)
chr3 (13-138)||(17464913-17465038)
chr3 (13-139)||(26837778-26837902)
chr3 (69-138)||(27394054-27394123)
chr3 (69-137)||(23644942-23645010)
chr3 (69-136)||(51473429-51473496)
chr3 (19-146)||(22424805-22424931)
chr3 (71-137)||(23228486-23228552)
chr3 (69-147)||(37220547-37220625)
chr3 (70-139)||(51474812-51474881)
chr3 (19-139)||(26837358-26837477)
chr3 (96-139)||(45965936-45965979)
chr3 (19-134)||(26274570-26274684)
chr3 (76-137)||(50116893-50116954)
chr3 (69-136)||(32697177-32697244)
chr3 (69-139)||(26275043-26275113)
chr3 (69-134)||(24300560-24300624)
chr3 (69-134)||(41047175-41047239)
chr3 (86-139)||(52375826-52375879)
chr3 (106-138)||(25611497-25611529)
[»] chr1 (36 HSPs)
chr1 (13-139)||(18984117-18984242)
chr1 (13-138)||(5540240-5540364)
chr1 (13-138)||(29869619-29869743)
chr1 (13-138)||(50970700-50970824)
chr1 (13-137)||(29306953-29307076)
chr1 (19-136)||(8678542-8678658)
chr1 (16-138)||(15646620-15646741)
chr1 (19-139)||(15173522-15173640)
chr1 (19-135)||(17433643-17433758)
chr1 (19-139)||(50970276-50970395)
chr1 (69-139)||(15646190-15646260)
chr1 (19-138)||(18984547-18984665)
chr1 (69-135)||(33144396-33144462)
chr1 (13-139)||(9018971-9019096)
chr1 (13-139)||(26859481-26859606)
chr1 (19-137)||(29307370-29307487)
chr1 (19-137)||(29870047-29870164)
chr1 (19-136)||(5539817-5539933)
chr1 (69-137)||(8679018-8679086)
chr1 (70-138)||(39154498-39154566)
chr1 (69-136)||(4636448-4636515)
chr1 (19-139)||(9019391-9019510)
chr1 (19-147)||(26859049-26859176)
chr1 (13-134)||(5963000-5963120)
chr1 (13-134)||(15173099-15173219)
chr1 (69-129)||(33143925-33143985)
chr1 (69-135)||(21856044-21856110)
chr1 (13-144)||(39154012-39154142)
chr1 (69-138)||(52268289-52268358)
chr1 (69-137)||(21856520-21856588)
chr1 (13-137)||(17433216-17433339)
chr1 (72-135)||(47826966-47827029)
chr1 (69-139)||(2733434-2733504)
chr1 (69-141)||(5962574-5962646)
chr1 (69-135)||(52269225-52269291)
chr1 (69-129)||(47827065-47827125)
[»] chr4 (53 HSPs)
chr4 (20-139)||(23494872-23494990)
chr4 (19-139)||(15523233-15523352)
chr4 (13-144)||(25937663-25937793)
chr4 (69-138)||(16318253-16318322)
chr4 (19-137)||(25447247-25447364)
chr4 (13-139)||(25447658-25447783)
chr4 (19-137)||(45082852-45082969)
chr4 (13-135)||(46193827-46193948)
chr4 (13-137)||(11153569-11153692)
chr4 (19-138)||(11153145-11153263)
chr4 (19-138)||(25938099-25938217)
chr4 (19-137)||(46193405-46193522)
chr4 (13-139)||(12234327-12234452)
chr4 (19-137)||(12234757-12234874)
chr4 (69-134)||(18751602-18751667)
chr4 (19-137)||(22434179-22434296)
chr4 (13-135)||(23494445-23494566)
chr4 (13-135)||(33109686-33109807)
chr4 (19-139)||(20470939-20471058)
chr4 (69-135)||(18763997-18764063)
chr4 (19-134)||(48526609-48526723)
chr4 (72-142)||(54995547-54995617)
chr4 (13-138)||(15523656-15523780)
chr4 (13-135)||(38962241-38962362)
chr4 (70-139)||(51021273-51021342)
chr4 (19-139)||(33109892-33110011)
chr4 (19-139)||(54995067-54995186)
chr4 (13-135)||(4219559-4219680)
chr4 (69-139)||(4220036-4220106)
chr4 (70-135)||(2118295-2118360)
chr4 (69-138)||(10258364-10258433)
chr4 (16-138)||(48526195-48526316)
chr4 (13-139)||(51020795-51020920)
chr4 (69-136)||(20958336-20958403)
chr4 (73-139)||(22434657-22434723)
chr4 (72-137)||(35363081-35363146)
chr4 (16-139)||(45082430-45082551)
chr4 (13-138)||(22170359-22170482)
chr4 (96-145)||(48293586-48293635)
chr4 (16-119)||(43243705-43243807)
chr4 (69-136)||(44890518-44890585)
chr4 (16-134)||(2118720-2118837)
chr4 (70-139)||(48708293-48708362)
chr4 (69-136)||(44892625-44892692)
chr4 (70-137)||(48295021-48295088)
chr4 (69-119)||(43281267-43281317)
chr4 (69-139)||(48713823-48713893)
chr4 (96-137)||(30598024-30598065)
chr4 (86-139)||(33689827-33689880)
chr4 (72-137)||(55189528-55189593)
chr4 (81-137)||(16691560-16691616)
chr4 (70-130)||(20957196-20957256)
chr4 (86-138)||(55677453-55677505)
[»] scaffold0951 (2 HSPs)
scaffold0951 (13-139)||(1665-1790)
scaffold0951 (19-139)||(2095-2214)
[»] scaffold0417 (2 HSPs)
scaffold0417 (19-148)||(11051-11179)
scaffold0417 (69-118)||(10640-10689)
[»] scaffold0432 (2 HSPs)
scaffold0432 (16-134)||(10297-10414)
scaffold0432 (74-134)||(9935-9995)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-139)||(134095-134220)
[»] scaffold0176 (2 HSPs)
scaffold0176 (69-137)||(19098-19166)
scaffold0176 (70-138)||(18834-18902)
[»] scaffold0007 (2 HSPs)
scaffold0007 (21-134)||(64735-64847)
scaffold0007 (13-138)||(64301-64425)
[»] scaffold1223 (2 HSPs)
scaffold1223 (13-135)||(755-875)
scaffold1223 (19-137)||(1169-1286)
[»] scaffold0113 (1 HSPs)
scaffold0113 (69-138)||(28720-28789)
[»] scaffold1585 (1 HSPs)
scaffold1585 (69-136)||(568-635)
[»] scaffold0057 (2 HSPs)
scaffold0057 (72-139)||(61026-61093)
scaffold0057 (72-134)||(61938-62000)
[»] scaffold0027 (2 HSPs)
scaffold0027 (69-139)||(42635-42705)
scaffold0027 (19-134)||(42172-42286)
[»] scaffold0076 (1 HSPs)
scaffold0076 (70-134)||(8487-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (70-133)||(454-516)


Alignment Details
Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 14747761 - 14747853
Alignment:
Q  138 tacaatataatggggtagaagtgccttttacaccatatttgacgaagaaacaaaagcaacaactcaaaagagcttaccaaacatgttttaaag 230  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  14747761 tacaatataatggggtagaagtgccttttacaccatatttgatgaagaaataaaagcaacaactcaaaagagcttaccaaacatgatttaaag 14747853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 13225067 - 13225185
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13225067 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgagga 13225165  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  13225166 ccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 41681254 - 41681132
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41681254 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacga 41681156  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||    
T  41681155 ggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 19176712 - 19176837
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||  |||||||||||||||||    
T  19176712 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagttacgtgagtaggccaaaaca 19176810  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  19176811 cgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 11656578 - 11656448
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||||||||||  ||||  ||||||||        | |||||||||||||| ||||||||| |||||||||||||||||    
T  11656578 atggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgtt-cagttttaaaagggcatgaccagtttcgtgagtaggccaaaaca 11656480  T
Q  113 cgaggaccaaaagtgtaattaagcctacaata 144  Q
    ||||||||||||||||||||||||||| ||||    
T  11656479 cgaggaccaaaagtgtaattaagcctaaaata 11656448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 33742990 - 33742920
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  33742990 ctgttttaaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 44831364 - 44831246
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||| ||||||||        |||||||||||||||| ||||| ||| ||||||||||||||||| |||||    
T  44831364 ggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacatgagga 44831266  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  44831265 ccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 19176403 - 19176288
Alignment:
Q  23 ggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaa 122  Q
    |||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||    
T  19176403 ggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaa 19176305  T
Q  123 aagtgtaattaagccta 139  Q
    |||||||||||||||||    
T  19176304 aagtgtaattaagccta 19176288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 9930079 - 9930203
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  |||||||         || ||||||||||||| ||||||||| ||||||||||||||| |    
T  9930079 atggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc-attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaata 9930177  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  9930178 cgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 34541026 - 34541095
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34541026 tgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 41681562 - 41681679
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||| | ||||||||| |||| ||||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgagga 41681660  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  41681661 ccaaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 31133648 - 31133764
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||| ||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  31133648 ggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-ctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgagga 31133746  T
Q  119 ccaaaagtgtaattaagc 136  Q
    ||||||||||||||||||    
T  31133747 ccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 11656885 - 11657003
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  |||||||         ||||||||||||| |  ||||||||| |||||||||||||||||||||||    
T  11656885 ggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaacacgagga 11656983  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  11656984 ccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 12571984 - 12571861
Alignment:
Q  15 ggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacg 114  Q
    ||||| |||||| ||||||||||||||||| |||||  || |||||        |||||||||||||| |  |||||||| |||||||||||||||||||    
T  12571984 gggggttaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacg 12571886  T
Q  115 aggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||    
T  12571885 aggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 134
Target Start/End: Complemental strand, 33328276 - 33328161
Alignment:
Q  18 gggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagg 117  Q
    ||||||||| ||||||||||||||||| ||| |  ||||||||        |||||||||||||||| || |||||| ||||||||||||||||||||||    
T  33328276 gggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt-ctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgagg 33328178  T
Q  118 accaaaagtgtaattaa 134  Q
    |||||||||||||||||    
T  33328177 accaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 9929026 - 9928912
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||  |||||||||||||    
T  9929026 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgagga 9928928  T
Q  119 ccaaaagtgtaattaa 134  Q
    ||||||||||||||||    
T  9928927 ccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 31133343 - 31133218
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  |||||| |         ||||||||||||||  ||||||||| ||||||||| |||||||    
T  31133343 atggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggactgttttgttt-tgttttaaaagggcgggaccagtttcgtgagtagggcaaaaca 31133245  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  31133244 cgaggaccaaaagtgtaattaagccta 31133218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 11336999 - 11337076
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaatata 146  Q
    |||||||||||||||  ||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  11336999 ctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgtaattaagcctacaatata 11337076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 44831667 - 44831792
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||  ||||        |||||||||||| ||| ||||||||| ||||||| |||||||||    
T  44831667 atggggggtaggaccaaaaatgcaacaaaaatgataattgaataaccgttttgtt-ctgttttaaaagagcaggaccagtttcgtgagtatgccaaaaca 44831765  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||||    
T  44831766 cgaggaccaaaagtgttattaagccta 44831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 9178112 - 9178180
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9178112 ctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 12572279 - 12572393
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||| ||| ||| ||||| |||||||| ||||||||||||||    
T  12572279 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagagcatgactagtttcgtgagtagaccaaaacacgagga 12572377  T
Q  119 ccaaaagtgtaattaa 134  Q
    ||||||||||||||||    
T  12572378 ccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 30686541 - 30686603
Alignment:
Q  146 aatggggtagaagtgccttttacaccatatttgacgaagaaacaaaagcaacaactcaaaaga 208  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  30686541 aatggggcagaagtgccttttacaccatacttgacgaagaaacaaaagaaacaactcaaaaga 30686603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 13224708 - 13224645
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaatta 133  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  13224708 ctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 33328562 - 33328683
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    ||||| ||| |||| ||||||||||||||||| |||||  ||||||||         ||||||||||| ||| ||| ||||| |||||||||| ||||||    
T  33328562 atgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagagcatgactagtttcgtgagtaggctaaaaca 33328660  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||| ||||||||    
T  33328661 cgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 8074028 - 8074097
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| || || || ||| |||| |||||||||||||||||||||||||| ||| |||||||    
T  8074028 ctgttttaaaaggacatgatcattttcgtgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 4629862 - 4629794
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctac 140  Q
    ||||||||||||| ||||||||| |||| || ||||||||||||| |  ||||||| ||||||||||||    
T  4629862 ttttaaaagggcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagcctac 4629794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 139
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  104 gccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 10919686 - 10919732
Alignment:
Q  92 ttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||    
T  10919686 ttttatgagtaggtcaaaacacgaggaccaaaagtataattaagcct 10919732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 4630263 - 4630328
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    |||||||||||  ||| ||||| ||| |||||||| ||||||||||| || |||||||||||||||    
T  4630263 ctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 10046689 - 10046659
Alignment:
Q  113 cgaggaccaaaagtgtaattaagcctacaat 143  Q
    |||||||||||||||||||||||||||||||    
T  10046689 cgaggaccaaaagtgtaattaagcctacaat 10046659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 10918182 - 10918124
Alignment:
Q  81 ggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||| ||| ||||||||  |||||||||||||| |||| ||||||||| ||||    
T  10918182 ggcaagaccaatttcgtgagtagatcaaaacacgaggacaaaaaatgtaattaaaccta 10918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 30686728 - 30686769
Alignment:
Q  146 aatggggtagaagtgccttttacaccatatttgacgaagaaa 187  Q
    ||||||| ||||||||||||||||||||| |||| |||||||    
T  30686728 aatggggcagaagtgccttttacaccatacttgatgaagaaa 30686769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 33743341 - 33743378
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataat 50  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33743341 atggggggtaggacgaaaaatgcaacaaaaatgataat 33743378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 35427308 - 35427360
Alignment:
Q  87 accagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||| ||| |||||| || |||||  |||||||||||||||||||||||||||    
T  35427308 accattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 35427360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 4916 - 4791
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  4916 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaaca 4818  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  4817 cgaggaccaaaagtgtaattaagccta 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 5268 - 5334
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  5268 ctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaaaagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 19830543 - 19830418
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||||||||||||| |||||||||||||||||    
T  19830543 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttcgtgagtaggccaaaaca 19830445  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||| ||||    
T  19830444 cgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 38859069 - 38859193
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||| ||||||||        |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  38859069 ggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 38859167  T
Q  119 ccaaaagtgtaattaagcctacaata 144  Q
    ||||||||||||||||||||| ||||    
T  38859168 ccaaaagtgtaattaagcctaaaata 38859193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 19590648 - 19590525
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||  ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  19590648 atggggggtaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 19590550  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  19590549 cgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 19590953 - 19591078
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||||||||||||||| |    
T  19590953 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagta 19591051  T
Q  119 ccaaaagtgtaattaagcctacaatat 145  Q
    ||||||||||||||||||||| |||||    
T  19591052 ccaaaagtgtaattaagcctaaaatat 19591078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 37786890 - 37786766
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| ||||||||| || ||||||||||||||    
T  37786890 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagggcaggaccagtttcgtaagtaggccaaaaca 37786792  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  37786791 cgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 29100273 - 29100393
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||||||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||| |||||||||||| ||||||||    
T  29100273 atggggggtaggacaaaaaatgcaacaaaaatgataattgaaagaccgttttgtt-ctgttttaaaagggcaggaccaattttgtgagtagaccaaaaca 29100371  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  29100372 cgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 35289323 - 35289448
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||||||| ||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  35289323 atggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 35289421  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||| ||||||||||||||||||||    
T  35289422 cgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 19830897 - 19830965
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19830897 tgttttaaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 32005036 - 32005159
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||| ||||||| ||||||||||||||||| ||||| |||||||||        || ||||||||||||| ||||||||| ||||||| |||||||||    
T  32005036 atggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgtt-ctattttaaaagggcatgaccagtttcgtgagtatgccaaaaca 32005134  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
     ||||||||||||||||||||||||    
T  32005135 tgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 34533859 - 34533789
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34533859 ctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 34534213 - 34534339
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||| ||||| || |||||| |||||||||||||||||    
T  34534213 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaatgggcaggatcagtttcgtgagtaggccaaaaca 34534311  T
Q  113 cgaggaccaaaagtgtaattaagcctac 140  Q
    |||| ||||||||| |||||||||||||    
T  34534312 cgagaaccaaaagtataattaagcctac 34534339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 38858766 - 38858642
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || |||||        |||||||||||| ||| ||||||||| ||||||| |||||||||    
T  38858766 atggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagagcaggaccagtttcgtgagtatgccaaaaca 38858668  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| |||||||||    
T  38858667 cgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 2658904 - 2658837
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  2658904 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 32004682 - 32004612
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| || || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32004682 ctgttttaaaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 2659262 - 2659387
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||  ||||||||||||||||| |||||  || |||||        ||||||||||||||||||||||||||  ||| |||||||||||     
T  2659262 atggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcaagaccagtttcatgaataggccaaaacg 2659360  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||||||||||||||    
T  2659361 cgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 35289019 - 35288903
Alignment:
Q  20 gtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggac 119  Q
    ||||||| ||||||||||||||||| |||||  |||||||         |||||||||||||||| ||||||||| ||||||||||||||| |||| |||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgac 35288921  T
Q  120 caaaagtgtaattaagcc 137  Q
    ||||||||||||||||||    
T  35288920 caaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 37787195 - 37787319
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||| ||||        ||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  37787195 ggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgtt-ctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgagga 37787293  T
Q  119 ccaaaagtgtaattaagcctacaata 144  Q
    |||||||| |||||||||||| ||||    
T  37787294 ccaaaagtataattaagcctaaaata 37787319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 4478177 - 4478247
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||| ||||    
T  4478177 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4641563 - 4641443
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || |||||         ||||| ||||| ||| ||||||||| ||||||| |||||||||    
T  4641563 atggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtta-tgtttcaaaagagcaggaccagtttcgtgagtaagccaaaaca 4641465  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  4641464 cgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 23952848 - 23952728
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggc-caaaacacgagg 117  Q
    |||||||| ||||||||||| ||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||||||  ||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagg 23952750  T
Q  118 accaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||    
T  23952749 accaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 29099967 - 29099863
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  29099967 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgagga 29099869  T
Q  119 ccaaaa 124  Q
    ||||||    
T  29099868 ccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 28583562 - 28583437
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||| |||||| |||||  |||||| |         |||||||||||||||  |||| | |  ||||||||||||||||    
T  28583562 atggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttatta-tgttttaaaagggcagaaccaatctcatgagtaggccaaaaca 28583464  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  28583463 cgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 38161019 - 38160949
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||  | ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  38161019 ctgttttaaaagggcaggattattttcgtgagtaggccaaaacccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 4641921 - 4641983
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||| || |||||||   |||||||||||||||||||||||||||||||||||||||    
T  4641921 ctgttttaaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 23953151 - 23953268
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||||||||||||| |||||  ||||||||        ||||||| |||||||  ||||||||| ||||||||  |||||||    
T  23953151 atggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttgaaagggcgggaccagtttcgtgagtagatcaaaaca 23953249  T
Q  113 cgaggaccaaaagtgtaat 131  Q
    |||||||||||| ||||||    
T  23953250 cgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 28584399 - 28584466
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    ||||||||||||| || ||||| ||| |||| ||||||||| ||||||||| ||||||||||||||||    
T  28584399 ctgttttaaaaggacatgaccaatttcgtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 49064090 - 49064033
Alignment:
Q  81 ggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||| |||| ||| |||||  || ||||| |||||||||||||||||||||||||||    
T  49064090 ggcaataccattttcgtgagctggtcaaaatacgaggaccaaaagtgtaattaagcct 49064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 22374443 - 22374318
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  22374443 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaaca 22374345  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  22374344 cgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 28616736 - 28616613
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||| |||||||||||| |||||  ||||||||        |||||||||||||||||||||||||| |||||||||||||||||    
T  28616736 atggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttcgtgagtaggccaaaaca 28616638  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  28616637 cgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 22374753 - 22374874
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  22374753 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccaatttcgtgagtaggccaaaacacgagga 22374851  T
Q  119 ccaaaagtgtaattaagcctaca 141  Q
    |||||||||||||||||||||||    
T  22374852 ccaaaagtgtaattaagcctaca 22374874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 26538501 - 26538626
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||| |||||| ||||||||| |||||||||||||||||    
T  26538501 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaagagggcaggaccagtttcgtgagtaggccaaaaca 26538599  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  26538600 cgaggaccaaaagtgtaattaagccta 26538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 40027263 - 40027139
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||| ||||||||||||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  40027263 atggagggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaaca 40027165  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||| ||||||||||||||||||||||    
T  40027164 cgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 11090644 - 11090519
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||| ||||| |||||||||||||||||    
T  11090644 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggacaagtttcgtgagtaggccaaaaca 11090546  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||| ||||    
T  11090545 cgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 26538220 - 26538096
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||||||  |||||||| ||||||| |||||||||    
T  26538220 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgctttgtt-ctgttttaaaagggcagaaccagtttcgtgagtaagccaaaaca 26538122  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  26538121 cgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 11090997 - 11091067
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11090997 ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 239475 - 239351
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||| || ||||||||| |||||||||||||||||    
T  239475 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagg-caggaccagtttcgtgagtaggccaaaaca 239378  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    ||| |||||||||||||||||||||||    
T  239377 cgatgaccaaaagtgtaattaagccta 239351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 1978231 - 1978106
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||  ||||||||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  1978231 atgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 1978133  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    | |||||||||| ||||||||||||||    
T  1978132 caaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 40815412 - 40815347
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40815412 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 40815767 - 40815892
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||| |||        ||||||||||||||||  |||||||| |||||||||||||||||    
T  40815767 atggggggtaggacgaaaaatgcaacaaaaatgataattgaagggccgttttgtt-ctgttttaaaagggcattaccagtttcgtgagtaggccaaaaca 40815865  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||| ||||    
T  40815866 cgaggaccaaaagtgtaattaaaccta 40815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 20444872 - 20444748
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||| |||||||||||| ||||   ||||||||        |||||||||||||||| ||||||||| |||||| ||||||||||    
T  20444872 atggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagttggccaaaaca 20444774  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  20444773 cgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 1978537 - 1978656
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||||||||||||||||||||| |||||  |||||| |        |||||||||||||||| ||||| ||| |||||||||||||||||| ||||    
T  1978537 ggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaagga 1978635  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  1978636 ccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 18450947 - 18450829
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||||||| |||||| |||||  ||||||||        |||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  18450947 ggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggctggaccagtttcgtgagtaggccaaaacacgagga 18450849  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  18450848 ccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 18451308 - 18451378
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  18451308 ctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 20440508 - 20440578
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  20440508 ctgttttaaaagggcaggaccagtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 14432265 - 14432145
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  ||||||||         | |||||||||||||||||||||||  ||||||||||||||||    
T  14432265 atggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgttttgtta-tattttaaaagggcaagaccagtttcatgagtaggccaaaaca 14432167  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  14432166 cgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 43058456 - 43058333
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    ||||||||||| || ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||| |||||| ||||||||||    
T  43058456 atggggggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaaggcaggaccagtttagtgagttggccaaaaca 43058358  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||| ||||||||||||||||||    
T  43058357 cgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 40027568 - 40027682
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  40027568 ggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 40027666  T
Q  119 ccaaaagtgtaattaa 134  Q
    ||||||||||||||||    
T  40027667 ccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 43058809 - 43058879
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  43058809 ctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 28617091 - 28617160
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28617091 ctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 28847123 - 28847251
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttt-tgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgagga 28847221  T
Q  119 ccaaaagtgtaattaagcctacaatataat 148  Q
    |||||| |||||||||||||| | ||||||    
T  28847222 ccaaaaatgtaattaagcctatattataat 28847251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 35779831 - 35779708
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||          ||||||||||| |||| ||||| ||| ||||||| | |||||||    
T  35779831 atggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaca-attttgttctgttttaaaatggcaggaccattttcgtgagtatgtcaaaaca 35779733  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  35779732 cgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 35781140 - 35781216
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaatat 145  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  35781140 ctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcttataatat 35781216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 239829 - 239896
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||||    
T  239829 ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 7446774 - 7446893
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||| | |||||||||||||    
T  7446774 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaaggcaaaacacgagga 7446872  T
Q  119 ccaaaagtgtaattaagccta 139  Q
     ||||| ||||||||||||||    
T  7446873 tcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 3025586 - 3025472
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| ||| |  ||||||||        |||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  3025586 gggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt-ctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacga 3025488  T
Q  116 ggaccaaaagtgtaat 131  Q
    ||||||||| ||||||    
T  3025487 ggaccaaaaatgtaat 3025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14432618 - 14432684
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||| |||| |||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  14432618 ctgttttaaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 7446410 - 7446341
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| ||||| |||  ||||||| |||||||||||||| |||||||||||||||||||    
T  7446410 ctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 8425423 - 8425358
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||| || ||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  8425423 ctgttttaaaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 3025891 - 3026006
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         |||||||||||||||  |||| ||| ||||||| |||||||||||||||    
T  3025891 ggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt--tgttttaaaagggcagaaccaatttcgtgagtaagccaaaacacgagga 3025988  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||| ||||||||||||    
T  3025989 ccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 8972305 - 8972239
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||| |||||||| ||||| ||| ||||| | ||||||||||||||||||||||||||||||||    
T  8972305 ctgttttgaaagggcatgaccattttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 15551566 - 15551501
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||| |||| ||||| ||| |||||||  |||||||||||||||||||||||||||||||    
T  15551566 tgttttaaaaaggcatgaccattttcgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 8425840 - 8425902
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||| ||||| ||| |||||||| ||||||||| || |||||||||||||||||    
T  8425840 ttttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 15552531 - 15552596
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||  || || ||| |||||||||||||||||  | |||||||||||||||||||    
T  15552531 ctgttttaaaagggcg-gatcattttcgtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 42192738 - 42192790
Alignment:
Q  86 gaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||| ||| |||||| || |||||  ||||||||||||||||||||||||||    
T  42192738 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcct 42192790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 4629 - 4755
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||        |||||||||||||||| ||||||||| ||||||| |||||||||    
T  4629 atggggggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtatgccaaaaca 4727  T
Q  113 cgaggaccaaaagtgtaattaagcctac 140  Q
    ||| ||||||||||||||||||||||||    
T  4728 cgaagaccaaaagtgtaattaagcctac 4755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 2319795 - 2319670
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  2319795 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaaca 2319697  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||||||||||||||    
T  2319696 cgaggaccaaaaatgtaattaagccta 2319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 10900352 - 10900475
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||||||||| |    
T  10900352 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaata 10900450  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  10900451 cgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 12935274 - 12935155
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  12935274 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 12935176  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  12935175 ccaaaagtgtaattaagccta 12935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 20741223 - 20741098
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  |||||||         |||||||||||||||| ||||||||| |||||||||||||||||    
T  20741223 atggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc-attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 20741125  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  20741124 cgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 15828063 - 15828187
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||| | ||||||||| |||||||||||||||||    
T  15828063 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttt-tgttttaaaagggtatgaccagtttcgtgagtaggccaaaaca 15828161  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  15828162 cgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 18257260 - 18257135
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||| |||||||||    
T  18257260 atggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtatgccaaaaca 18257162  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  18257161 cgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 11277004 - 11277127
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| ||||        |||||||||||||||| ||||||||| ||||||| |||||||||    
T  11277004 atggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaagccaaaaca 11277102  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  11277103 cgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 11445415 - 11445534
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  11445415 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagga 11445513  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  11445514 ccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 22219781 - 22219900
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    ||||| || ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  22219781 ggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 22219879  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  22219880 ccaaaagtgtaattaagccta 22219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 23075556 - 23075675
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    ||||| || ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  23075556 ggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgagga 23075654  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  23075655 ccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 1149533 - 1149463
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  1149533 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 10900056 - 10899942
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  10900056 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatga 10899958  T
Q  119 ccaaaagtgtaattaa 134  Q
    ||||||||||||||||    
T  10899957 ccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 11445110 - 11444985
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||| ||||||||| ||||||||||||||||| |||||  |||||||         |||||||||| ||||| |||||| || |||||||||||||||||    
T  11445110 atggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaaca 11445012  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  11445011 cgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 23074064 - 23073998
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23074064 ttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 31470738 - 31470860
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||||||  |||||||| |||||||||| ||||||    
T  31470738 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcagaaccagtttcgtgagtaggctaaaaca 31470836  T
Q  113 cgaggaccaaaagtgtaattaagc 136  Q
    | ||||||||||||||||||||||    
T  31470837 caaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 12935579 - 12935704
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||| ||||||||| |||||  ||||||||        |||||||| || |||| ||||||||| ||||||| |||||||||    
T  12935579 atggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgttttgtt-ctgttttataaaggcaggaccagtttcgtgagtacgccaaaaca 12935677  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  12935678 cgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 1149854 - 1149977
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||||||||||  ||||  ||||||||        || ||||||||||||| |||||||||  ||||||||| ||||||    
T  1149854 atggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccgttttgtt-ctattttaaaagggcatgaccagtttcatgagtaggctaaaaca 1149952  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  1149953 cgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 18257565 - 18257682
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||| ||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgagga 18257663  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||| ||||||||||    
T  18257664 ccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 18504987 - 18504922
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18504987 ctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 20741581 - 20741650
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  20741581 ctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 31470383 - 31470314
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  31470383 ctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 2322644 - 2322760
Alignment:
Q  17 ggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgag 116  Q
    |||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||||||| ||||| |||||||| |||||||||||     
T  2322644 ggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaa 2322742  T
Q  117 gaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||    
T  2322743 gaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 18505341 - 18505463
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||| |         ||||||||||||||| || |||||| |||||||| ||||||||    
T  18505341 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgtta-tgttttaaaagggcaggatcagtttcgtgagtagaccaaaaca 18505439  T
Q  113 cgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||| |||||||||    
T  18505440 cgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 28472757 - 28472635
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  || ||||         ||||||||||| |||| ||||| ||| |||||| |||||||||||||    
T  28472757 gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc-attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacga 28472659  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||    
T  28472658 ggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 29859946 - 29859824
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  || ||||         ||||||||||| |||| ||||| ||| |||||| |||||||||||||    
T  29859946 gggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc-attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacga 29859848  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||    
T  29859847 ggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 15827705 - 15827639
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||| ||  |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  15827705 tgttttaaaaggacagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 29033502 - 29033436
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||| ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  29033502 ctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 4811495 - 4811372
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||| ||||||||| |||||  ||||||||        || ||||||||||||| ||||||||| |||||||| |||||| |    
T  4811495 atggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttatt-ctattttaaaagggcatgaccagtttcgtgagtagaccaaaata 4811397  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |  ||||||||||||||||||||||    
T  4811396 ctgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 29035114 - 29035180
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||||||  |||| ||| |||||||||| ||||||||||||| |||||||||||||||    
T  29035114 ctgttttaaaagggcataaccaatttcgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 18296265 - 18296143
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| ||||   |||||| |        ||||||||||||||||| | || ||||||||||| | ||||||||||    
T  18296265 gggggtaggacgaaaaatgcaacaaaaatgataaatgaaggac-ggttttgttctgttttaaaagggcaatatcaattttgtgagtaagtcaaaacacga 18296167  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    |||| |||| | ||||||||||||    
T  18296166 ggactaaaattataattaagccta 18296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 3835148 - 3835268
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||| |||||||| ||||| |||||||          ||||||||||  |||| ||||| ||| ||||||||| |||||||    
T  3835148 atggggggtaggacgaaaaatgccacaaaaatgataattaaaggaca-attttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaaaaca 3835246  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    |  |||||||||||||||||||    
T  3835247 catggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 4811733 - 4811801
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||  ||| || ||||||  |||||||||||||||||||||| ||||||| ||||||||||    
T  4811733 ctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 11276658 - 11276589
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||| | || ||||||  ||||||| |||||||||| |||| ||| ||||||||||||||    
T  11276658 ctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  81 ggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||| ||||| ||| |||||| || ||||| ||||||||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 2865177 - 2865302
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||| ||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  2865177 atggggggtaggacgaaaaatgaaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 2865275  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  2865276 cgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 18183395 - 18183516
Alignment:
Q  17 ggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgag 116  Q
    |||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18183395 ggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgag 18183493  T
Q  117 gaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||    
T  18183494 gaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 5819351 - 5819474
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  5819351 atggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 5819449  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  5819450 cgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 24362258 - 24362384
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  ||||||||        |||||||||||||||| ||||||||| ||||||||||||||| |    
T  24362258 atggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccgttttatt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaata 24362356  T
Q  113 cgaggaccaaaagtgtaattaagcctac 140  Q
    ||||||||||||||||||||||||||||    
T  24362357 cgaggaccaaaagtgtaattaagcctac 24362384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 8647561 - 8647438
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||         ||||||||||| |||| ||||||||| |||||||||||||||||    
T  8647561 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaaca 8647463  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  8647462 cgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 19359259 - 19359136
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        || ||||||||||||| ||||||||| |||||||||||||||||    
T  19359259 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctattttaaaagggcaggaccagtttcgtgagtaggccaaaaca 19359161  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
     ||||||||||||||||||||||||    
T  19359160 agaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 19359564 - 19359683
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||| |||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  19359564 ggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 19359662  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  19359663 ccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 164613 - 164738
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||        |||||||||||||||||||||||||| |||||| ||||||||||    
T  164613 atggggggtaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttagtgagttggccaaaaca 164711  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
     ||||| ||||| | ||||||||||||    
T  164712 tgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 29455164 - 29455288
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||         |||||||||||||||| ||||||||| |||||||| ||||||||    
T  29455164 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaaca 29455262  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||| ||||||||||||||    
T  29455263 cgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 8647866 - 8647990
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||| ||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  8647866 ggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgagga 8647964  T
Q  119 ccaaaagtgtaattaagcctacaata 144  Q
    ||||||||||||||||||||| ||||    
T  8647965 ccaaaagtgtaattaagcctaaaata 8647990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 18183087 - 18182968
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||| ||    
T  18183087 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatga 18182989  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||    
T  18182988 ccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 5818997 - 5818927
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  5818997 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 15372350 - 15372420
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  15372350 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 15709091 - 15708969
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||| ||||||||||||| |||||  ||||||||        ||||||||||||||||  |||||||| |||||||||||||||||| |    
T  15709091 gggggtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcataaccagtttcgtgagtaggccaaaacacta 15708993  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||    
T  15708992 ggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 24331627 - 24331557
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  24331627 ctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 8461053 - 8460928
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||||||| ||||||||||||||| |    
T  8461053 atggggggtatgacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaata 8460955  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    ||| ||||||||||| |||||||||||    
T  8460954 cgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 8461408 - 8461477
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8461408 ctgttttaaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 164258 - 164191
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  164258 tgttataaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 14215720 - 14215790
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| || |||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  14215720 ctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 27056558 - 27056635
Alignment:
Q  147 atggggtagaagtgccttttacaccatatttgacgaagaaacaaaagcaacaactcaaaagagcttaccaaacatgtt 224  Q
    |||||| |||||| |||||||||||||| ||||| ||||||||| |||||||||| |||||||| |||||||||||||    
T  27056558 atggggcagaagttccttttacaccatacttgacaaagaaacaatagcaacaacttaaaagagcataccaaacatgtt 27056635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 2864871 - 2864756
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| || || ||| |||||||||||||||||| ||||    
T  2864871 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagggcatgatcaatttcgtgagtaggccaaaacacaagga 2864773  T
Q  119 ccaaaagtgtaattaag 135  Q
    |||||||||||||||||    
T  2864772 ccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 4222199 - 4222266
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| ||||| ||| ||||| || ||||||||||||||||||||||||||||||||    
T  4222199 ctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgaggaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 7349495 - 7349562
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||||| ||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  7349495 tgttttaaaagagcaggaccaatttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 14215309 - 14215243
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||| |  |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  14215309 ctgttttaaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 29454857 - 29454739
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||| ||||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||||||||||||||| | ||    
T  29454857 ggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgtt-ctgttttaaaagggcatgaccaatttcgtgagtaggccaaaacacaatga 29454759  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||| ||||||||||    
T  29454758 ccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 14464000 - 14464067
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||| ||| |  ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 16018654 - 16018588
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| || || ||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16018654 ttttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 4219783 - 4219663
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| ||||  |||||||          ||||||||||| |||| ||||| |||||| | ||| |||||||||||    
T  4219783 gggggtaggacgaaaaatgcaacaaaaatgataactaaaggaca-actttgttctgttttaaaaaggcatgaccatttttgtaaatagcccaaaacacga 4219685  T
Q  116 ggaccaaaagtgtaattaagcc 137  Q
    ||| ||||||||||||||||||    
T  4219684 ggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 25000566 - 25000635
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||  || ||||| ||| ||||||||||||||||| || ||||||||||||||||||||||    
T  25000566 ctgttttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 7348627 - 7348559
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||| ||||| ||| |||||||| | |||||| ||||||||||| ||||||||||||    
T  7348627 ctgttttaaaagggcacgaccaatttcgtgagtagactaaaacatgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 6018382 - 6018315
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    ||||||||||||| || ||||||||| ||||||||  ||||||||||| ||||||| |||||||||||    
T  6018382 ctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 16019067 - 16019134
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||| ||| ||||| ||| ||||||| ||||||||| ||||||||||||||||||||| ||||    
T  16019067 ttttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 24361960 - 24361843
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  |||||||         |||||||| ||||||| || |||||| ||| |||||||||||||    
T  24361960 atggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc-attttgttctgttttacaagggcatgatcagtttcgtgggtaggccaaaaca 24361862  T
Q  113 cgaggaccaaaagtgtaat 131  Q
     | ||||||||||||||||    
T  24361861 tggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 25000213 - 25000112
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||||         ||||||||| |||||| |||||  || |||||||||||||||||    
T  25000213 atggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc-attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaaca 25000115  T
Q  113 cga 115  Q
    |||    
T  25000114 cga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 15709397 - 15709513
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||||||||| |||| ||||  |||||||||        |||||||||| ||||| ||| |||||  ||||||||||||||||| | ||    
T  15709397 ggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgtt-ctgttttaaa-gggcatgactagtttcatgagtaggccaaaacacaatga 15709494  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  15709495 ccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 4623216 - 4623148
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||||  |||| ||||| ||| ||||||| | |||||||||| |||||||||||||||||||||    
T  4623216 ctgttttaaagaggcaggaccaatttcgtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 15371938 - 15371873
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||| ||||| ||  |||||||| |||||| ||||||| ||||||||||||||||    
T  15371938 ctgttttaaaagggcaggaccaattc-gtgagtagaccaaaatacgaggatcaaaagtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 24325280 - 24325218
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaat 131  Q
    |||||||| ||||||| || |||||| ||| ||||||||||||| | ||||||||||||||||    
T  24325280 ctgttttacaagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 4967264 - 4967327
Alignment:
Q  84 aagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaatataat 148  Q
    ||||||| |||||||||| || |||||   |||||||||||||||||||||||||| ||||||||    
T  4967264 aagaccatttttgtgagttggtcaaaatgtgaggaccaaaagtgtaattaagccta-aatataat 4967327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 6019248 - 6019309
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaat 131  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||| || |||||||| ||||||    
T  6019248 ctgttttaaaagagcaagatcagtttcgtgagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 31779074 - 31779199
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    ||||||||| |||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  31779074 atggggggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 31779172  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  31779173 cgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 4275792 - 4275911
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| ||||| |||||||||        |||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  4275792 ggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgtt-ctgttttaaaagagcatgaccagtttcgtgagtaggccaaaacacgagga 4275890  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  4275891 ccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 20840683 - 20840558
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        || |||||||| |||| ||||||||| |||||||||||||||||    
T  20840683 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctattttaaaaaggcaggaccagtttcgtgagtaggccaaaaca 20840585  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  20840584 cgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 27393781 - 27393660
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  27393781 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaatggcaggaccagttttgtgagtaggtcaaaacacga 27393683  T
Q  116 ggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||||||||||    
T  27393682 ggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 39555999 - 39556122
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||| ||||| |||||  |||||||         |||||||||||||||| ||||||||| |||||||||||||||||    
T  39555999 atggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc-attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 39556097  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  39556098 cgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 5137103 - 5136978
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||| ||||||||||    
T  5137103 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccaatttcgtgagttggccaaaaca 5137005  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||| ||||    
T  5137004 cgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 48453112 - 48452987
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||| |||||||||||||||||    
T  48453112 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaatggcaggaccagtttcgtgagtaggccaaaaca 48453014  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    ||| ||||||||||||||| |||||||    
T  48453013 cgatgaccaaaagtgtaatcaagccta 48452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 32535440 - 32535508
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32535440 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 41046823 - 41046703
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| || | ||||||||||||    
T  41046823 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtaattaggccaaaaca 41046725  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  41046724 cgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 43973868 - 43973992
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  || |||||        ||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  43973868 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcagaaccagtttcgtgagtaggccaaaacacgagga 43973966  T
Q  119 ccaaaagtgtaattaagcctacaata 144  Q
    ||||||||||||||||||||| ||||    
T  43973967 ccaaaagtgtaattaagcctaaaata 43973992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 17464608 - 17464489
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  17464608 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgcgaataggccaaaacacgagga 17464510  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  17464509 ccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 30098191 - 30098309
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  |||||||         |||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  30098191 ggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaacacgagga 30098289  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  30098290 ccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 30104602 - 30104480
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| ||||| ||| ||||||||| ||||||||||    
T  30104602 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttctattt-tgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacga 30104504  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||||||    
T  30104503 ggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 20840989 - 20841107
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||| ||||||||||||||||||||| |    
T  20840989 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgagca 20841087  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  20841088 ccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 24300978 - 24301103
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  ||||||||         |||||||||| |||| ||||| ||| |||||||||||||||||    
T  24300978 atggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggaccgttttgttt-tgttttaaaatggcaggaccaatttcgtgagtaggccaaaaca 24301076  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  24301077 cgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  15 ggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacg 114  Q
    |||||||| ||| ||||||||||||||||| ||| |  ||||||||        |||||||||||||||| ||||||||||||||||| |||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt-ctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacg 29801379  T
Q  115 aggaccaaaagtgtaattaagcc 137  Q
    | |||||||||||||||||||||    
T  29801378 atgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 37727358 - 37727475
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  37727358 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacatgagga 37727456  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  37727457 ccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 39555646 - 39555577
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39555646 ctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 23644585 - 23644461
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||| |        ||||||||||| |||| ||||| ||| ||||||||||||||| |    
T  23644585 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgtt-ctgttttaaaatggcaggaccaatttcgtgagtaggccaaaata 23644487  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  23644486 cgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 43973564 - 43973441
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||||||  | || ||| ||||||||| |||||||    
T  43973564 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcataatcattttcgtgagtaggacaaaaca 43973466  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  43973465 cgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 29801893 - 29801963
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  29801893 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 31778770 - 31778652
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| ||||   ||||||||        |||||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  31778770 ggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcatgagtagaccaaaacacgagga 31778672  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  31778671 ccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 37222048 - 37222118
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37222048 ctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 25853299 - 25853234
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  25853299 ttttaaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 37727052 - 37726928
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||         |||||||||||||||  |||||||| || || || ||||||||    
T  37727052 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagggcagaaccagtttcgtaagcagaccaaaaca 37726954  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  37726953 cgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 25612399 - 25612519
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||||| ||| ||| |        || ||||||||||||| ||||| ||| ||||||||| |||||||    
T  25612399 atggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgtt-ctattttaaaagggcaggaccaatttcgtgagtaggtcaaaaca 25612497  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  25612498 cgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 5137461 - 5137528
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  5137461 ttttaaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 22425235 - 22425354
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| ||||        |||||||| ||||||| |||||| || ||||||||||| |||||    
T  22425235 atggggggtaggacgaaaaatgcaacaaaaatgataattgaagtaccgttttgtt-ctgttttacaagggcatgaccagattcgtgagtaggccgaaaca 22425333  T
Q  113 cgaggaccaaaagtgtaatta 133  Q
    |||||||||||||||||||||    
T  22425334 cgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 25853649 - 25853770
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||||         ||||||||||| | |||||||||||| ||||||||  |||||||    
T  25853649 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaaca 25853747  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||| ||||||||||||||||    
T  25853748 cgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 32535076 - 32534962
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||| ||| ||||||| |||||||||||||||    
T  32535076 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaacacgagga 32534978  T
Q  119 ccaaaagtgtaattaa 134  Q
    ||||||||||||||||    
T  32534977 ccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 17464913 - 17465038
Alignment:
Q  13 atggggggtaggacaaaaaa-tgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaac 111  Q
    |||||||||||||||||||| |||||||||||| |||||  ||||||||        || |||||||||||  ||||||||||  || ||||||||||||    
T  17464913 atggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctattttaaaagggtcagaccagtttcatgcgtaggccaaaac 17465011  T
Q  112 acgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| |||||||||||||    
T  17465012 acgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 26837778 - 26837902
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||||||||||||||||||||| ||| |  || |||||        || ||||||| |||||  |||||||| || ||||||||||||||    
T  26837778 atggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgaccgttttgtt-ctattttaaa-gggcagaaccagtttcgtaagtaggccaaaaca 26837875  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  26837876 cgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 27394054 - 27394123
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||| |||| ||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27394054 ctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 23644942 - 23645010
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||| | ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  23644942 ctgttttaaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 51473496 - 51473429
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| ||||| ||| |||| ||| ||||||||||||||||||||||||||||||||    
T  51473496 ctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaaaagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 22424931 - 22424805
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||| ||  |||||||| || |||||||  ||||||||| |    
T  22424931 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaggacagaaccagtttcgtaagtaggcttaaacacgagaa 22424833  T
Q  119 ccaaaagtgtaattaagcctacaatata 146  Q
    ||||||||||||||||||||| ||||||    
T  22424832 ccaaaagtgtaattaagcctaaaatata 22424805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 23228486 - 23228552
Alignment:
Q  71 gttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||| || || ||| ||||||||||||||||||| ||||||||||||||||||||||    
T  23228486 gttttaaaagggcatgatcattttcgtgagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 37220625 - 37220547
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaatataa 147  Q
    |||||||||||| ||| || |  | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37220625 ctgttttaaaagagcatgatcgatattgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctataatataa 37220547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 51474812 - 51474881
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||| ||||| ||| ||||||| ||||||||||| | ||||||||||||||||||||||    
T  51474812 tgttttaaaagggcatgaccaatttcgtgagtatgccaaaacacgggaaccaaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 26837477 - 26837358
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         |||| |||||||||| ||||| ||| ||||||||||||||| || ||||    
T  26837477 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgtta-tgttataaaagggcaggaccaatttcgtgagtaggccaaaatacaagga 26837379  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||| ||||||||| ||||    
T  26837378 ccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 45965979 - 45965936
Alignment:
Q  96 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  45965979 gtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 26274684 - 26274570
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||| ||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||| |||||| || ||||    
T  26274684 ggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtagtccaaaatacaagga 26274586  T
Q  119 ccaaaagtgtaattaa 134  Q
     ||||| |||||||||    
T  26274585 tcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 50116893 - 50116954
Alignment:
Q  76 aaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||| ||||| ||| ||||||| | ||||||||||||| ||||||||||||||||||    
T  50116893 aaaagggcatgaccaatttcgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 32697177 - 32697244
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||  ||| | ||| |||||||||| |||||||||||||||||| | |||||||||    
T  32697177 ctgttttaaaagggcgtgactaatttcgtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 26275043 - 26275113
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||| ||| |||||| | ||||||| ||||    
T  26275043 ctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaaccta 26275113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 24300624 - 24300560
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||| || ||||||||| |||| || |||||||||||| |||||||| |||||||||    
T  24300624 ctgttttaaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 41047175 - 41047239
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||| ||  |||||||| ||||||||||||||||| || || | |||||||||||||    
T  41047175 ctgttttaaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 52375826 - 52375879
Alignment:
Q  86 gaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||| ||| |||||| || |||||  |||||||||||||||||||||||||||    
T  52375826 gaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagccta 52375879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 25611529 - 25611497
Alignment:
Q  106 caaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||| |||||||||||||||||||    
T  25611529 caaaacacgaggatcaaaagtgtaattaagcct 25611497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 18984242 - 18984117
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||| ||||||||    
T  18984242 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtagaccaaaaca 18984144  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  18984143 cgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 5540240 - 5540364
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||| || ||||||||| |||||||||||||||||    
T  5540240 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttctt-ctgttttaaaaggacaggaccagtttcgtgagtaggccaaaaca 5540338  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  5540339 cgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 29869743 - 29869619
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||| ||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||||||||||||| ||||||| |||||||||    
T  29869743 atggggtgtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttcgtgagtatgccaaaaca 29869645  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  29869644 cgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 50970700 - 50970824
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| || ||||||||||||||    
T  50970700 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtaagtaggccaaaaca 50970798  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  50970799 cgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 29307076 - 29306953
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||| || ||||||||| |||||||||||||||||    
T  29307076 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaggacatgaccagtttcgtgagtaggccaaaaca 29306978  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||| ||||||||||||||||||    
T  29306977 cgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 8678658 - 8678542
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttt-tgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 8678560  T
Q  119 ccaaaagtgtaattaagc 136  Q
    ||||||||||||||||||    
T  8678559 ccaaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 138
Target Start/End: Original strand, 15646620 - 15646741
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||| | || |||||| ||||||||||||||||||||    
T  15646620 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacga 15646718  T
Q  116 ggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||||||||||    
T  15646719 ggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 15173522 - 15173640
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  |||||||         ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  15173522 ggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-attttgttctgttttaaaagg-caggaccagttttgtgagtaggccaaaacacgagga 15173619  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  15173620 ccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 17433643 - 17433758
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  17433643 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaggccagaacacgagga 17433741  T
Q  119 ccaaaagtgtaattaag 135  Q
    |||||||||||||||||    
T  17433742 ccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 50970395 - 50970276
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  50970395 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgatttaaaagagcaggaccagtttcgtgagtaggccaaaacacgagga 50970297  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  50970296 ccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 15646260 - 15646190
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  15646260 ctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 18984547 - 18984665
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||||||||||||||| ||||    
T  18984547 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaagga 18984645  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  18984646 ccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 33144396 - 33144462
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33144396 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 9019096 - 9018971
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  || |||||        ||||||||||||||||  |||||||| || ||||||||||||||    
T  9019096 atggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgaccgttttgtt-ctgttttaaaagggcagaaccagtttcgttagtaggccaaaaca 9018998  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  9018997 cgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 26859481 - 26859606
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||  ||||| |||||||| ||||||||    
T  26859481 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtattgtt-ctgttttaaaagggcaggattagtttcgtgagtagcccaaaaca 26859579  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||| ||||||||||||||||||||    
T  26859580 cgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 29307370 - 29307487
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  29307370 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgagga 29307468  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    ||||||||| |||||||||    
T  29307469 ccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 29870047 - 29870164
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  29870047 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaatggcaggaccagtttcatgagtaggccaaaacacgagga 29870145  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  29870146 ccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 5539933 - 5539817
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||| |||||||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  5539933 ggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 5539835  T
Q  119 ccaaaagtgtaattaagc 136  Q
    ||||||||||||||||||    
T  5539834 ccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 8679018 - 8679086
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  8679018 ctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 39154498 - 39154566
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39154498 tgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 4636448 - 4636515
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4636448 ctgttttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 9019391 - 9019510
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  || |||||        ||||||||||| ||||  |||||||||||||||||| |||||||||||||    
T  9019391 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgagga 9019489  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  9019490 ccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 26859176 - 26859049
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||| |||| ||||||||| || ||||||||||||||| ||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaagga 26859078  T
Q  119 ccaaaagtgtaattaagcctacaatataa 147  Q
    ||||||||||||||||||| | |||||||    
T  26859077 ccaaaagtgtaattaagccaaaaatataa 26859049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 5963000 - 5963120
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || ||| |        || ||||||||||||| || |||||| |||||||||||||||||    
T  5963000 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaagactgttttgtt-ctattttaaaagggcatgatcagtttcgtgagtaggccaaaaca 5963098  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  5963099 cgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 15173219 - 15173099
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||| ||||        |  ||||||||||||| ||| ||||| |||||||||||||||||    
T  15173219 atggggggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgtt-caattttaaaagggcaggactagtttcgtgagtaggccaaaaca 15173121  T
Q  113 cgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||||||||||||    
T  15173120 cgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 33143985 - 33143925
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgta 129  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  33143985 ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 21856110 - 21856044
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  21856110 ctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 39154142 - 39154012
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||   |||||||        |||||||||||||||| || |||||| ||||||| |||||||||    
T  39154142 atggggggtaggacgaaaaatgcaacaaaaatgataattgcaggaccgttttgtt-ctgttttaaaagggcatgatcagtttcgtgagtatgccaaaaca 39154044  T
Q  113 cgaggaccaaaagtgtaattaagcctacaata 144  Q
     || ||||||||||||||||||| ||| ||||    
T  39154043 tgatgaccaaaagtgtaattaagtctataata 39154012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 52268358 - 52268289
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| ||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||    
T  52268358 ctgttttaaaagggcaggaccaatttcgtgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 21856520 - 21856588
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||||| |||| || ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21856520 ctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 17433339 - 17433216
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||  ||||||||||||||||| ||| |  ||||||||        |||||||||||||||| |  ||||||  ||||||||||||||||    
T  17433339 atggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggaccgttttgtt-ctgttttaaaagggcatggtcagtttcatgagtaggccaaaaca 17433241  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
     ||||||||||||||||||||||||    
T  17433240 tgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 47827029 - 47826966
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  47827029 ttttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 2733434 - 2733504
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||| ||| | || ||||||||||||| |||||||||||| ||||||||||||    
T  2733434 ctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 5962646 - 5962574
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaca 141  Q
    |||||||||||||||  ||||||||| |||| ||| ||| |||||||||||||||| ||||||||||| ||||    
T  5962646 ctgttttaaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagcttaca 5962574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 52269225 - 52269291
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||||||  |||  |||  |||||| | ||||||||||||||||||||||||||||||    
T  52269225 ctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggaccaaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 47827065 - 47827125
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgta 129  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||| |  || ||||||||||    
T  47827065 ctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgta 47827125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 23494872 - 23494990
Alignment:
Q  20 gtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggac 119  Q
    ||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 23494970  T
Q  120 caaaagtgtaattaagccta 139  Q
    ||||||||||||||||||||    
T  23494971 caaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 15523352 - 15523233
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||||||| |||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  15523352 ggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgagga 15523254  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  15523253 ccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 144
Target Start/End: Complemental strand, 25937793 - 25937663
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||  ||||||||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| |||||||||| ||||||    
T  25937793 atgggggacaggacaaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggctaaaaca 25937695  T
Q  113 cgaggaccaaaagtgtaattaagcctacaata 144  Q
    |||||||||||| |||||||||||||| ||||    
T  25937694 cgaggaccaaaaatgtaattaagcctaaaata 25937663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 16318253 - 16318322
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16318253 ctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 25447364 - 25447247
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  25447364 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 25447266  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  25447265 ccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 25447658 - 25447783
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||| ||||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||||||| |||||||||||||||||    
T  25447658 atggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 25447756  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    ||| |||||||||||||||||||||||    
T  25447757 cgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 45082852 - 45082969
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  45082852 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgaccagtttcgtgagtaagccaaaacacgagga 45082950  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  45082951 ccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 46193827 - 46193948
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||| |||||| |||||  ||||||||        |||||||||||||||| ||||| ||| |||||||||||||||||    
T  46193827 atggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaaca 46193925  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||||||||||||||    
T  46193926 cgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 11153569 - 11153692
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||| ||||||||| ||||||||||||||||| |||||  ||||| ||        ||||||||||| |||| ||||||||| |||||||||||||||||    
T  11153569 atggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaacgttttgtt-ctgttttaaaatggcaggaccagtttcgtgagtaggccaaaaca 11153667  T
Q  113 cgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||||||||    
T  11153668 cgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 11153263 - 11153145
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        || ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  11153263 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttatt-ctattttaaaagggcatgaccaattttgtgagtaggccaaaacacgagga 11153165  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    |||||||| |||||||||||    
T  11153164 ccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 25938099 - 25938217
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||||||||||||||||||||| |||||  |||||| |        |||||||||||||||| ||||| ||| |||||||||||||||||| ||||    
T  25938099 ggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgtt-ctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaagga 25938197  T
Q  119 ccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||    
T  25938198 ccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 46193522 - 46193405
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  |||||||         |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  46193522 ggtaggacgaaaaatgcaacaaaaatgataattgaaggacc-tttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgagga 46193424  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  46193423 ccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 12234452 - 12234327
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||||||| |||| || |||||||||    
T  12234452 atggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgaataagccaaaaca 12234354  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
     ||||||||||||||||||||||||||    
T  12234353 agaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 12234757 - 12234874
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||| || |||||| |||||||||||||||||||||||    
T  12234757 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgagga 12234855  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||| ||||||||||    
T  12234856 ccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 18751667 - 18751602
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18751667 ctgttttaaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 22434296 - 22434179
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| |||||| |||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  22434296 ggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgagga 22434198  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    |||||||||||||||||||    
T  22434197 ccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 23494566 - 23494445
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||| |||||| |||||  ||||||||        |||||||||||||||| ||| ||||| |||||||||||||||||    
T  23494566 atggggggtaggacgaaaaatgcaataaaaatgataattgaaggaccgctttgtt-ctgttttaaaagggcaggactagtttcgtgagtaggccaaaaca 23494468  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||| ||||||||||    
T  23494467 cgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 33109807 - 33109686
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||| ||| ||||||||| ||||||| |||||||||    
T  33109807 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagagcaggaccagtttcgtgagtatgccaaaaca 33109709  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||| ||||||||||    
T  33109708 cgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 20470939 - 20471058
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||| | ||||||||| || ||||||||||||||||||||    
T  20470939 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggaatgaccagtttcgtaagtaggccaaaacacgagga 20471037  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  20471038 ccaaaagtgtaattaagccta 20471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 18763997 - 18764063
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18763997 ctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 48526609 - 48526723
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||| | |||||  ||||||||        |||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  48526609 ggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgtt-ctgttttaaaagggcaagaccagtttcgtgagtagaccaaaacacgagga 48526707  T
Q  119 ccaaaagtgtaattaa 134  Q
    |||||||| |||||||    
T  48526708 ccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 54995547 - 54995617
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaa 142  Q
    ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  54995547 ttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctacaa 54995617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 15523656 - 15523780
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| ||| |  |||||||          ||||||||||||||| ||||||||| |||||||| ||||||||    
T  15523656 atggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttt-tgttttaaaagggcaggaccagtttcgtgagtagcccaaaaca 15523754  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||| ||||||||||||||||||||||    
T  15523755 cgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 38962241 - 38962362
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||||  ||||||||| |||| ||| ||||||||    
T  38962241 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggccggaccagtttcgtgaatagaccaaaaca 38962339  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||| ||||||||||    
T  38962340 cgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 51021273 - 51021342
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  51021273 tgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 33109892 - 33110011
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| ||||| ||| ||||| ||||||||||| |||||    
T  33109892 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagggcaggaccaatttcgtgagcaggccaaaacatgagga 33109990  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  33109991 ccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 54995186 - 54995067
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||| | ||| ||||| ||||||||||||| |||||||||    
T  54995186 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggtaggactagtttcgtgagtaggccaatacacgagga 54995088  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||| ||||    
T  54995087 ccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 4219680 - 4219559
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  |||||| |         | |||||||| |||| ||||||||| |||||||||||||||||    
T  4219680 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggactgttttgttt-tattttaaaatggcaggaccagtttcgtgagtaggccaaaaca 4219582  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    |||||||||||| ||||||||||    
T  4219581 cgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 4220036 - 4220106
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  4220036 ctgttttaaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 2118360 - 2118295
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 135  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||    
T  2118360 tgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 10258364 - 10258433
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| ||||| |||  ||||||||||| ||||||||||||||||||||||||||||||    
T  10258364 ctgttttaaaagggcaggaccaatttcctgagtaggccacaacacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 48526316 - 48526195
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        ||||||||||||||||   |||||||  |||||||| ||||||||||    
T  48526316 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacga 48526218  T
Q  116 ggaccaaaagtgtaattaagcct 138  Q
    | |||||||||||||||||||||    
T  48526217 gaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 51020920 - 51020795
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||| ||        |||||||||||||||| ||||||||| |||| |  |||||||||    
T  51020920 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgtt-ctgttttaaaagggcaggaccagtttagtgaattagccaaaaca 51020822  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
     ||||| ||||||||||||||||||||    
T  51020821 tgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 20958336 - 20958403
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| ||||| ||| ||||||||||||||| |||||||| ||||||||||||||||    
T  20958336 ctgttttaaaagggcaggaccattttcgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 22434657 - 22434723
Alignment:
Q  73 tttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  22434657 tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 35363081 - 35363146
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    ||||||||| |||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  35363081 ttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 45082551 - 45082430
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        || |||||||||||||| |||||||  |||||||| |||||||||||    
T  45082551 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctattttaaaagggcaaaaccagttc-gtgagtagaccaaaacacga 45082454  T
Q  116 ggaccaaaagtgtaattaagccta 139  Q
     ||||||||| |||||||| ||||    
T  45082453 tgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 138
Target Start/End: Original strand, 22170359 - 22170482
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  || |||||         |||||||||| |||| ||| | ||| || |||||| |||||||    
T  22170359 atggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttt-tgttttaaaaaggcaggacaa-tttcgtcagtaggtcaaaaca 22170456  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  22170457 cgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 48293635 - 48293586
Alignment:
Q  96 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctacaatat 145  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  48293635 gtgagtaagccaaaacacgaggaccaaaagtgtaattaagcctataatat 48293586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 43243705 - 43243807
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||||||||||||||||||||| |||||  ||| ||          |||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  43243705 gggggtaggacaaaaaatgcaacaaaaatgataattgaagaaca-attttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacacga 43243803  T
Q  116 ggac 119  Q
    ||||    
T  43243804 ggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 44890585 - 44890518
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| ||||| ||| |||| |||| |||||||| |||||||||| |||||||||||    
T  44890585 ctgttttaaaagggcatgaccattttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 2118720 - 2118837
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  || |||||         ||||||||||||  | |||||||||  |||| ||||||||||||||    
T  2118720 gggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtta-tgttttaaaaggataggaccagtttcatgagcaggccaaaacacga 2118818  T
Q  116 ggaccaaaagtgtaattaa 134  Q
     ||||||||||||||||||    
T  2118819 agaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 48708362 - 48708293
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||| || || ||| |||  |||||||||||||  ||||||||||||||||||||||||    
T  48708362 tgttttaaaagggcaggatcattttcgtggttaggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 44892625 - 44892692
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    ||||||||||| ||||  |||| ||| ||||||||| ||||||||||||||||||| | |||||||||    
T  44892625 ctgttttaaaatggcagaaccattttcgtgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 48295021 - 48295088
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||  |||||||||| ||| ||||||||  |||||||||| |||||||| ||||||||||||    
T  48295021 tgttttaaagaggcaagaccaatttcgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 43281267 - 43281317
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggac 119  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  43281267 ctgttttaaaatggcatgaccattttcgtgagtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 48713823 - 48713893
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||| ||| ||||| |||  ||||||||| |||||||||| |  |||||||||||||| ||||    
T  48713823 ctgttttaaaagagcatgaccattttcatgagtaggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 30598024 - 30598065
Alignment:
Q  96 gtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||| || |||||||||||||||||||||||||| |||||    
T  30598024 gtgagttggtcaaaacacgaggaccaaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 33689880 - 33689827
Alignment:
Q  86 gaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||| |||||||||| || |||||  | |||||||||||||||||||||||||    
T  33689880 gaccaattttgtgagttggtcaaaatgcaaggaccaaaagtgtaattaagccta 33689827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 55189593 - 55189528
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||  |||| |||| ||| |||| ||||||||||||| ||||| | ||||||||||    
T  55189593 ttttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatataattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 16691560 - 16691616
Alignment:
Q  81 ggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||| ||||| ||| ||||||||| ||||||||  ||| ||||||||||||||||||    
T  16691560 ggcaggaccattttcgtgagtaggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 20957256 - 20957196
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaa 130  Q
    ||||||||||| | | ||||| ||| ||||||| |||||||| |||||||||||| |||||    
T  20957256 tgttttaaaagagtatgaccattttcgtgagtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 55677453 - 55677505
Alignment:
Q  86 gaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||| ||| |||||| || ||||| || ||||||||||||||||||||||||    
T  55677453 gaccaatttcgtgagttggtcaaaatacaaggaccaaaagtgtaattaagcct 55677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 139
Target Start/End: Complemental strand, 1790 - 1665
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||||| |||||  ||||| |         |||||||||||||||| ||||||||| |||||||||||||||||    
T  1790 atggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaac-attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaaca 1692  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
     ||||||||||||||||||||||||||    
T  1691 ggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 2095 - 2214
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  || |||||        |||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  2095 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgagga 2193  T
Q  119 ccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||    
T  2194 ccaaaagtgtaattaagccta 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 11051 - 11179
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||||||||||||||||| |||||  ||||||||         ||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  11051 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtta-tgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgagga 11149  T
Q  119 ccaaaagtgtaattaagcctacaatataat 148  Q
    |||||||||||||||||||  |||||||||    
T  11150 ccaaaagtgtaattaagccatcaatataat 11179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 10689 - 10640
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||||||    
T  10689 ctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 10297 - 10414
Alignment:
Q  16 gggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacga 115  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||||        |||||||||||||| || |||||||| |||||||| |||||||||||    
T  10297 gggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacga 10395  T
Q  116 ggaccaaaagtgtaattaa 134  Q
    |||||||||||||||||||    
T  10396 ggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 9995 - 9935
Alignment:
Q  74 ttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    |||||||||||||| |||||| |||| ||||| |||||||||||||||||| |||||||||    
T  9995 ttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgtaattaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 134095 - 134220
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| |||||||||||||||||  ||||  ||||| ||        |||| ||||||||||| ||| ||||| |||||||||||||||||    
T  134095 atggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatcgttttgtt-ctgtattaaaagggcatgactagtttcgtgagtaggccaaaaca 134193  T
Q  113 cgaggaccaaaagtgtaattaagccta 139  Q
    |||||||||||||||||||||||||||    
T  134194 cgaggaccaaaagtgtaattaagccta 134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 19098 - 19166
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 137  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19098 ctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 18902 - 18834
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||| ||||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  21 taggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggacc 120  Q
    |||||| ||||||||||||||||| ||||| |||||||||        |||||||||||||||  ||||||||| ||||||| |||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgtt-ctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacc 64833  T
Q  121 aaaagtgtaattaa 134  Q
    ||||||||||||||    
T  64834 aaaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 138
Target Start/End: Complemental strand, 64425 - 64301
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||| ||| ||||||||||||||||| |||||  ||||||||        ||||||||||||| || || |||||| ||||||| | |||||||    
T  64425 atggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaaca 64327  T
Q  113 cgaggaccaaaagtgtaattaagcct 138  Q
    ||||||||||||||||||||||||||    
T  64326 cgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 875 - 755
Alignment:
Q  13 atggggggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaaca 112  Q
    |||||||||||||| ||||||||||||||| | |||||  ||||||||        |||||||||||||||| ||||||| | |||||||||||||||||    
T  875 atggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtatcgtgagtaggccaaaaca 778  T
Q  113 cgaggaccaaaagtgtaattaag 135  Q
    ||| |||||||||||||||||||    
T  777 cgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 1169 - 1286
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||        |||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  1169 ggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttgtt-ctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgagga 1267  T
Q  119 ccaaaagtgtaattaagcc 137  Q
    | |||||||||||||||||    
T  1268 ctaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 28720 - 28789
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 138  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||| ||||    
T  28720 ctgttttaaaagggcatgaccagtttcgtaagtaggccaaaacacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 635 - 568
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 136  Q
    |||||||||||||||| || || ||| ||||||||||||||||||||||| |||||||||||||||||    
T  635 ctgttttaaaagggcatgatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 61093 - 61026
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    |||||||| |||| || || ||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  61093 ttttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 61938 - 62000
Alignment:
Q  72 ttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||| | ||||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  61938 ttttaaaagggtaggaccattttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 42635 - 42705
Alignment:
Q  69 ctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 139  Q
    ||||||||||||||||  | ||||||  ||||||| ||||||||||||| |||||||| ||||||||||||    
T  42635 ctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagccta 42705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 42286 - 42172
Alignment:
Q  19 ggtaggacaaaaaatgcaacaaaaattataatgaaaggaccgnnnnnnnnctgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgagga 118  Q
    |||| ||||||||||||||||||||| |||||  || |||||        ||||||||||| |||| || |||||| |||| ||| |||||||||||| |    
T  42286 ggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttgtt-ctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaa 42188  T
Q  119 ccaaaagtgtaattaa 134  Q
    | ||||||||||||||    
T  42187 ctaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 8487 - 8551
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 134  Q
    ||||||||||||| | ||||||||| || ||||| |||||||| || ||||||||||||||||||    
T  8487 tgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaattaa 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 516 - 454
Alignment:
Q  70 tgttttaaaagggcaagaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaatta 133  Q
    |||||||||||  || ||||| ||| |||||||||||||||||||| |||||||| ||||||||    
T  516 tgttttaaaagatcatgaccattttcgtgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University