View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14323_low_55 (Length: 237)

Name: NF14323_low_55
Description: NF14323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14323_low_55
NF14323_low_55
[»] chr5 (46 HSPs)
chr5 (13-191)||(2865124-2865302)
chr5 (13-189)||(5819298-5819474)
chr5 (13-192)||(18183338-18183517)
chr5 (13-191)||(8460928-8461106)
chr5 (13-189)||(8647438-8647614)
chr5 (13-189)||(19359136-19359312)
chr5 (13-191)||(24362205-24362383)
chr5 (13-190)||(29455111-29455288)
chr5 (17-193)||(14215616-14215792)
chr5 (13-192)||(15708968-15709146)
chr5 (13-192)||(164560-164739)
chr5 (13-192)||(15372242-15372421)
chr5 (13-190)||(16018588-16018763)
chr5 (29-191)||(19359520-19359683)
chr5 (29-191)||(5818927-5819090)
chr5 (29-191)||(18182968-18183131)
chr5 (29-192)||(8647822-8647986)
chr5 (27-190)||(25000471-25000635)
chr5 (24-191)||(14463901-14464067)
chr5 (13-187)||(24331929-24332107)
chr5 (29-190)||(8461315-8461477)
chr5 (29-183)||(24361843-24361997)
chr5 (13-167)||(25000112-25000266)
chr5 (30-189)||(164191-164350)
chr5 (29-187)||(2864756-2864915)
chr5 (29-183)||(24325218-24325372)
chr5 (29-187)||(14215243-14215402)
chr5 (29-192)||(24331556-24331722)
chr5 (29-190)||(29454739-29454901)
chr5 (49-189)||(7349422-7349562)
chr5 (27-191)||(16018969-16019134)
chr5 (69-188)||(4222147-4222266)
chr5 (29-189)||(15709353-15709513)
chr5 (48-189)||(4623148-4623287)
chr5 (76-187)||(15371873-15371983)
chr5 (51-189)||(4219663-4219800)
chr5 (63-189)||(7348559-7348685)
chr5 (51-183)||(6019177-6019309)
chr5 (50-176)||(4624631-4624757)
chr5 (50-188)||(6018315-6018452)
chr5 (49-138)||(13814133-13814226)
chr5 (29-110)||(14462683-14462769)
chr5 (29-101)||(10721873-10721945)
chr5 (13-72)||(24325580-24325639)
chr5 (29-59)||(14340793-14340823)
chr5 (13-59)||(16752711-16752757)
[»] chr1 (40 HSPs)
chr1 (13-190)||(50970647-50970824)
chr1 (13-191)||(18984117-18984295)
chr1 (20-190)||(5540194-5540364)
chr1 (13-190)||(29869619-29869796)
chr1 (20-190)||(15646571-15646741)
chr1 (13-187)||(33144288-33144462)
chr1 (13-186)||(5962947-5963120)
chr1 (13-186)||(15173099-15173272)
chr1 (20-189)||(29306953-29307122)
chr1 (13-189)||(8678911-8679086)
chr1 (13-192)||(9018970-9019149)
chr1 (13-189)||(21856412-21856588)
chr1 (13-189)||(17433216-17433392)
chr1 (13-187)||(39154021-39154195)
chr1 (15-191)||(26859431-26859606)
chr1 (20-189)||(29307317-29307487)
chr1 (20-192)||(9019338-9019511)
chr1 (27-187)||(17433597-17433758)
chr1 (31-191)||(50970276-50970437)
chr1 (29-189)||(29870003-29870164)
chr1 (49-190)||(52268289-52268430)
chr1 (29-188)||(5539817-5539977)
chr1 (72-188)||(8678542-8678658)
chr1 (29-192)||(21856039-21856203)
chr1 (30-188)||(4636356-4636515)
chr1 (29-191)||(15173478-15173640)
chr1 (63-190)||(18984538-18984665)
chr1 (29-190)||(39154404-39154566)
chr1 (29-181)||(33143925-33144078)
chr1 (29-191)||(15646190-15646353)
chr1 (72-189)||(26859059-26859176)
chr1 (29-188)||(5962579-5962739)
chr1 (15-129)||(4636033-4636146)
chr1 (73-187)||(52269177-52269291)
chr1 (103-192)||(2733416-2733505)
chr1 (89-198)||(47827033-47827141)
chr1 (29-189)||(17112282-17112442)
chr1 (114-187)||(47826966-47827039)
chr1 (109-189)||(50419726-50419806)
chr1 (19-53)||(17088516-17088550)
[»] scaffold0295 (2 HSPs)
scaffold0295 (13-192)||(4790-4969)
scaffold0295 (75-187)||(5222-5334)
[»] chr4 (62 HSPs)
chr4 (13-192)||(12234326-12234505)
chr4 (19-191)||(25447611-25447783)
chr4 (13-187)||(46193774-46193948)
chr4 (13-192)||(51020794-51020973)
chr4 (13-187)||(33109686-33109860)
chr4 (13-190)||(15523603-15523780)
chr4 (13-189)||(11153516-11153692)
chr4 (13-192)||(22434547-22434724)
chr4 (13-192)||(25937667-25937846)
chr4 (20-187)||(38962195-38962362)
chr4 (13-190)||(22170306-22170482)
chr4 (13-187)||(4219559-4219733)
chr4 (13-187)||(23494445-23494619)
chr4 (13-186)||(2118665-2118837)
chr4 (13-190)||(48526195-48526371)
chr4 (13-192)||(45082429-45082606)
chr4 (13-191)||(54995437-54995614)
chr4 (29-195)||(20470895-20471062)
chr4 (27-189)||(46193405-46193568)
chr4 (29-189)||(22434179-22434340)
chr4 (29-189)||(25447247-25447408)
chr4 (73-192)||(23494872-23494991)
chr4 (30-191)||(15523233-15523395)
chr4 (29-189)||(45082808-45082969)
chr4 (29-192)||(4219943-4220107)
chr4 (29-191)||(54995067-54995230)
chr4 (29-189)||(12234713-12234874)
chr4 (29-186)||(48526565-48526723)
chr4 (13-121)||(12503805-12503913)
chr4 (63-191)||(33109883-33110011)
chr4 (63-190)||(25938090-25938217)
chr4 (29-190)||(11153145-11153307)
chr4 (75-192)||(18763951-18764068)
chr4 (29-191)||(51021180-51021342)
chr4 (29-186)||(18751602-18751760)
chr4 (63-187)||(2118295-2118419)
chr4 (49-188)||(20958266-20958403)
chr4 (49-188)||(44892553-44892692)
chr4 (72-189)||(35363028-35363146)
chr4 (49-191)||(48293592-48293734)
chr4 (49-189)||(48294947-48295088)
chr4 (49-167)||(43243686-43243803)
chr4 (53-191)||(48708293-48708431)
chr4 (49-191)||(48713751-48713893)
chr4 (49-188)||(44890518-44890657)
chr4 (53-186)||(16690939-16691072)
chr4 (29-172)||(12503453-12503597)
chr4 (51-167)||(43281198-43281313)
chr4 (63-190)||(10258306-10258433)
chr4 (51-182)||(20957196-20957327)
chr4 (49-131)||(43242328-43242410)
chr4 (53-189)||(16691481-16691616)
chr4 (119-190)||(16318251-16318322)
chr4 (13-80)||(18751971-18752038)
chr4 (13-199)||(17503964-17504149)
chr4 (81-189)||(55189528-55189636)
chr4 (49-128)||(44220782-44220861)
chr4 (13-53)||(17504329-17504369)
chr4 (13-53)||(35193443-35193483)
chr4 (13-46)||(40160236-40160269)
chr4 (49-189)||(30597926-30598065)
chr4 (51-186)||(55191181-55191318)
[»] scaffold0273 (2 HSPs)
scaffold0273 (13-191)||(4576-4754)
scaffold0273 (29-150)||(4242-4364)
[»] chr7 (29 HSPs)
chr7 (13-191)||(19830418-19830596)
chr7 (13-190)||(37786766-37786943)
chr7 (13-189)||(19590525-19590701)
chr7 (15-192)||(2659211-2659388)
chr7 (13-190)||(38858642-38858819)
chr7 (13-186)||(29100220-29100393)
chr7 (15-191)||(35289272-35289448)
chr7 (15-189)||(32004985-32005159)
chr7 (13-186)||(4641443-4641616)
chr7 (15-191)||(34534162-34534338)
chr7 (29-192)||(19590909-19591073)
chr7 (20-183)||(23953105-23953268)
chr7 (20-191)||(4478076-4478247)
chr7 (29-192)||(38859025-38859189)
chr7 (29-191)||(2658837-2659000)
chr7 (29-191)||(34533789-34533952)
chr7 (30-191)||(32004612-32004774)
chr7 (31-192)||(37787153-37787315)
chr7 (29-176)||(29099863-29100011)
chr7 (73-189)||(35288903-35289019)
chr7 (49-192)||(38160948-38161091)
chr7 (51-191)||(28583437-28583577)
chr7 (49-188)||(28584327-28584466)
chr7 (29-190)||(19830804-19830965)
chr7 (72-192)||(23952727-23952848)
chr7 (29-186)||(4641828-4641983)
chr7 (13-186)||(35578902-35579074)
chr7 (13-101)||(35579256-35579344)
chr7 (20-55)||(32427397-32427432)
[»] chr6 (36 HSPs)
chr6 (13-191)||(20741098-20741276)
chr6 (13-189)||(10900299-10900475)
chr6 (13-189)||(11276951-11277127)
chr6 (13-191)||(18257135-18257313)
chr6 (13-190)||(15828010-15828187)
chr6 (13-192)||(28472634-28472812)
chr6 (13-192)||(29859823-29860001)
chr6 (15-191)||(12935528-12935704)
chr6 (13-192)||(11444984-11445163)
chr6 (13-188)||(31470685-31470860)
chr6 (15-189)||(1149802-1149977)
chr6 (29-192)||(2319669-2319832)
chr6 (13-186)||(2322588-2322760)
chr6 (20-186)||(10899942-10900109)
chr6 (13-188)||(18505288-18505463)
chr6 (29-192)||(12935154-12935318)
chr6 (29-192)||(11445371-11445535)
chr6 (29-192)||(22219737-22219901)
chr6 (29-191)||(23075512-23075675)
chr6 (13-190)||(23073998-23074164)
chr6 (26-189)||(4811372-4811535)
chr6 (29-186)||(18504922-18505080)
chr6 (29-190)||(31470314-31470476)
chr6 (29-189)||(18257521-18257682)
chr6 (29-190)||(20741485-20741650)
chr6 (20-190)||(11276589-11276760)
chr6 (49-187)||(29033436-29033575)
chr6 (53-186)||(3835135-3835268)
chr6 (63-188)||(15827639-15827766)
chr6 (49-187)||(29035042-29035180)
chr6 (49-192)||(18296142-18296284)
chr6 (101-191)||(1149463-1149553)
chr6 (63-189)||(4811675-4811801)
chr6 (14-96)||(35163557-35163639)
chr6 (133-189)||(22534214-22534270)
chr6 (13-53)||(32836367-32836407)
[»] chr8 (32 HSPs)
chr8 (13-197)||(12571855-12572040)
chr8 (13-192)||(19176659-19176838)
chr8 (13-198)||(44831614-44831799)
chr8 (16-191)||(41681132-41681306)
chr8 (13-185)||(13224645-13224816)
chr8 (13-196)||(31133213-31133396)
chr8 (13-190)||(9930026-9930203)
chr8 (15-192)||(11656452-11656630)
chr8 (13-186)||(33328161-33328334)
chr8 (13-189)||(9178005-9178180)
chr8 (29-190)||(13225023-13225185)
chr8 (29-192)||(19176287-19176451)
chr8 (29-190)||(44831246-44831408)
chr8 (72-189)||(41681562-41681679)
chr8 (29-192)||(33742919-33743082)
chr8 (15-142)||(33743290-33743417)
chr8 (13-186)||(4630161-4630328)
chr8 (29-186)||(9928912-9929070)
chr8 (29-190)||(11656841-11657003)
chr8 (63-192)||(34540967-34541096)
chr8 (30-188)||(31133605-31133764)
chr8 (29-186)||(12572235-12572393)
chr8 (29-187)||(33328524-33328683)
chr8 (81-191)||(11336959-11337069)
chr8 (35-191)||(4629795-4629952)
chr8 (49-190)||(8073957-8074097)
chr8 (51-192)||(10918123-10918264)
chr8 (49-107)||(43958267-43958325)
chr8 (29-97)||(9177724-9177793)
chr8 (156-191)||(9177665-9177700)
chr8 (14-47)||(18805304-18805337)
chr8 (144-192)||(43958206-43958254)
[»] chr3 (59 HSPs)
chr3 (13-189)||(39555946-39556122)
chr3 (13-191)||(31779021-31779199)
chr3 (13-186)||(41046703-41046876)
chr3 (13-191)||(5136978-5137156)
chr3 (15-193)||(20840556-20840734)
chr3 (13-192)||(24300925-24301104)
chr3 (13-190)||(37726928-37727105)
chr3 (13-190)||(23644461-23644638)
chr3 (34-192)||(48452986-48453144)
chr3 (13-192)||(26837725-26837903)
chr3 (13-192)||(30104479-30104657)
chr3 (15-189)||(32535330-32535508)
chr3 (13-187)||(25853596-25853770)
chr3 (13-190)||(27393946-27394123)
chr3 (20-189)||(43973441-43973610)
chr3 (13-185)||(22425182-22425354)
chr3 (29-192)||(43973824-43973988)
chr3 (29-192)||(17464488-17464652)
chr3 (13-192)||(26274936-26275114)
chr3 (13-190)||(17464860-17465038)
chr3 (29-189)||(37727314-37727475)
chr3 (29-190)||(20840945-20841107)
chr3 (29-190)||(27393660-27393822)
chr3 (27-192)||(29801798-29801964)
chr3 (29-190)||(39555577-39555739)
chr3 (29-191)||(4275748-4275911)
chr3 (29-190)||(31778652-31778814)
chr3 (49-186)||(25612382-25612519)
chr3 (29-189)||(23644849-23645010)
chr3 (29-189)||(25853234-25853395)
chr3 (29-192)||(5137365-5137529)
chr3 (29-190)||(30098147-30098309)
chr3 (68-189)||(29801356-29801477)
chr3 (29-192)||(22424811-22424975)
chr3 (63-186)||(32534962-32535085)
chr3 (49-189)||(50116814-50116954)
chr3 (29-191)||(26837358-26837521)
chr3 (29-186)||(24300560-24300717)
chr3 (50-189)||(23228414-23228552)
chr3 (29-186)||(26274570-26274728)
chr3 (29-186)||(41047083-41047239)
chr3 (48-188)||(32697105-32697244)
chr3 (49-192)||(51474738-51474882)
chr3 (75-188)||(51473429-51473542)
chr3 (49-191)||(37220555-37220697)
chr3 (51-191)||(45965936-45966076)
chr3 (51-187)||(25420548-25420684)
chr3 (61-164)||(18010162-18010265)
chr3 (49-188)||(25419145-25419284)
chr3 (113-191)||(37222040-37222118)
chr3 (49-190)||(23227261-23227396)
chr3 (12-192)||(49407793-49407972)
chr3 (13-84)||(55192222-55192293)
chr3 (13-73)||(29801532-29801592)
chr3 (13-192)||(27200062-27200240)
chr3 (13-96)||(37075781-37075864)
chr3 (62-186)||(32695706-32695830)
chr3 (136-192)||(52375824-52375880)
chr3 (136-192)||(55390090-55390146)
[»] chr2 (38 HSPs)
chr2 (15-191)||(11090519-11090695)
chr2 (13-192)||(239350-239528)
chr2 (13-190)||(40027139-40027316)
chr2 (13-189)||(43058333-43058509)
chr2 (13-192)||(18451200-18451379)
chr2 (13-192)||(40815714-40815893)
chr2 (13-191)||(22374318-22374496)
chr2 (13-191)||(1978106-1978284)
chr2 (13-190)||(26538096-26538273)
chr2 (15-189)||(28616613-28616788)
chr2 (16-186)||(14432145-14432315)
chr2 (20-192)||(26538454-26538627)
chr2 (13-192)||(3025463-3025641)
chr2 (20-186)||(8425736-8425902)
chr2 (15-190)||(7446341-7446519)
chr2 (49-190)||(20444748-20444889)
chr2 (29-192)||(7446730-7446894)
chr2 (49-192)||(20440437-20440579)
chr2 (29-190)||(18450829-18450991)
chr2 (29-196)||(40815338-40815506)
chr2 (29-191)||(22374709-22374872)
chr2 (29-186)||(40027524-40027682)
chr2 (49-188)||(35781068-35781207)
chr2 (49-189)||(35779708-35779848)
chr2 (29-192)||(43058717-43058880)
chr2 (29-191)||(11090904-11091067)
chr2 (29-190)||(28616998-28617160)
chr2 (29-188)||(239736-239896)
chr2 (63-191)||(1978528-1978656)
chr2 (72-191)||(28847123-28847242)
chr2 (49-187)||(8972239-8972377)
chr2 (30-186)||(8425358-8425514)
chr2 (30-189)||(3025848-3026006)
chr2 (48-187)||(15552458-15552596)
chr2 (49-187)||(15551501-15551639)
chr2 (29-192)||(14432525-14432689)
chr2 (13-192)||(28143400-28143578)
chr2 (190-218)||(16195029-16195057)
[»] scaffold0951 (2 HSPs)
scaffold0951 (15-191)||(1665-1841)
scaffold0951 (29-195)||(2051-2218)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-192)||(134042-134221)
[»] scaffold0007 (3 HSPs)
scaffold0007 (13-190)||(64301-64478)
scaffold0007 (74-186)||(64735-64847)
scaffold0007 (13-187)||(205738-205911)
[»] scaffold1223 (2 HSPs)
scaffold1223 (13-187)||(755-928)
scaffold1223 (20-189)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (13-192)||(42528-42706)
scaffold0027 (20-186)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (13-186)||(10242-10414)
scaffold0432 (82-186)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (13-167)||(10643-10797)
scaffold0417 (63-189)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (22-190)||(18834-19001)
scaffold0176 (92-189)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (63-190)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (13-121)||(16564-16672)
scaffold0157 (29-172)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (49-188)||(568-707)
[»] scaffold0057 (2 HSPs)
scaffold0057 (49-186)||(61863-62000)
scaffold0057 (115-191)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (49-185)||(454-588)
[»] scaffold0076 (1 HSPs)
scaffold0076 (86-186)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (49-140)||(7693-7784)


Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 2865124 - 2865302
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2865302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 5819298 - 5819474
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 18183338 - 18183517
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18183517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 8461106 - 8460928
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||| |||||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagccta 8460928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 8647614 - 8647438
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
     |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 19359312 - 19359136
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 24362205 - 24362383
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 29455111 - 29455288
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
     |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 14215616 - 14215792
Alignment:
Q  17 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  117 tgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 193  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||||| ||||||||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagcctaag 14215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 15709146 - 15708968
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagcctaa 15708968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 164560 - 164739
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| ||||||||| |||| | |||||||||| || || ||||| | |||||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagcctaa 164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 15372242 - 15372421
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| | |||||||||||||||||||||||||| |||||||||| |||||||||||  |||| || ||||||||||||||||||||| ||||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 15372421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 16018763 - 16018588
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||| ||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||| ||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 19359520 - 19359683
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||||||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgtttt 19359619  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  19359620 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 5819090 - 5818927
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 5818927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 18183131 - 18182968
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| ||| | |||||| | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaaccta 18182968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 8647822 - 8647986
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| |  |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 8647986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 25000471 - 25000635
Alignment:
Q  27 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||||||||||| |||||||||||  | ||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||  || ||||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 14463901 - 14464067
Alignment:
Q  24 taggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| || |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  124 ttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||| ||  |  |||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagccta 14464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 24331929 - 24332107
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacg-aaaaatgcaac-aaaaatgataattgaatga 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| | ||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  111 ccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc-aaaagtgtaattaag 187  Q
    ||||||||||||||||| |||| ||||||| ||||||||||| || ||||||||| || |||| |||||||||||||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaag 24332107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 8461315 - 8461477
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || |||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 24361997 - 24361843
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 183  Q
     ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24361843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 167  Q
     |||| ||||||||||| |||||| |||||  ||||||| |||||||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 30 - 189
Target Start/End: Complemental strand, 164350 - 164191
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    ||||| |||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||||||| || || |||||||| ||||||||||||| | |||||||||||||||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 24325372 - 24325218
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 183  Q
     ||||||| || ||||||||||  |||||||||||| |  |||||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgtaat 24325218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||||| |  ||||||||||||| || |||||||||||| |||||||||||||||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 24331722 - 24331556
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat--gataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | ||||| |||||||||||||||||   |||||||||| |||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagcctaa 24331556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 29454901 - 29454739
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||| ||||| |||||||| ||||||||||||| | ||||||||||| ||||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 7349422 - 7349562
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| | |||||||||||||||| ||||| ||||||||||||||||| |||| ||  |||||||| ||||||||||| ||||||||| |||||    
T  7349422 cgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaatttcg 7349521  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||| ||| ||||||||||| |||||||||||||||||||||    
T  7349522 tgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 16018969 - 16019134
Alignment:
Q  27 gtctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||||||||||| ||||| |||||  ||||| | || ||||||||||||||| ||||||||||||||||||||  ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||| ||||||||| |||||||| || ||||||||| || |||||||||||||||||| ||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaaccta 16019134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  69 gggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaa 168  Q
    |||||||||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||||| ||||| ||||||||  || |||||||||||     
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  169 gaccaaaagtgtaattaagc 188  Q
    ||||||||||||||||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 15709353 - 15709513
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| || || |||||  | ||||| || ||||||||||||||||||||| ||||||||| | || |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
     |||||||| ||| |||||| ||| ||||||||||||| | |||||||||||||||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 189
Target Start/End: Complemental strand, 4623287 - 4623148
Alignment:
Q  48 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    |||||||||||| |||||||||||  ||||||| ||||||| | |||||||||||||||| |||  |||||||||||||||||  |||||||||| ||||    
T  4623287 acgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttc 4623190  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||| || | |||||||||| |||||||||||||||||||||    
T  4623189 gtgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 187
Target Start/End: Complemental strand, 15371983 - 15371873
Alignment:
Q  76 ggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaa 175  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||| ||| |||||| |||| || ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  176 agtgtaattaag 187  Q
    ||||||||||||    
T  15371884 agtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 189
Target Start/End: Complemental strand, 4219800 - 4219663
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||| | || |||   ||||||||||||||||| |||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||| ||||||||||| || ||||||||||||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 189
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    |||||||||||||||||||||| |||||||||||||||||  ||| ||  |||||||||||||||||||||||| ||||| |||||||| ||| | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  163 cacgaagaccaaaagtgtaattaagcc 189  Q
    || || |||||||| ||||||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 183
Target Start/End: Original strand, 6019177 - 6019309
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 149  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  150 gaataggccaaaacacgaagaccaaaagtgtaat 183  Q
    || || ||||||||| || |||||||| ||||||    
T  6019277 gagta-gccaaaacatgatgaccaaaaatgtaat 6019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 4624631 - 4624757
Alignment:
Q  50 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 149  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||  | || ||||| ||||||    
T  4624631 gtttttgaaggataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagagacatgaccaatttcgt 4624730  T
Q  150 gaataggccaaaacacgaagaccaaaa 176  Q
    || ||||  ||||||||| ||| ||||    
T  4624731 gagtaggttaaaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 6018452 - 6018315
Alignment:
Q  50 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 149  Q
    ||||||||||   ||||| | ||||||||| |||| |||||||||||||||||||||| ||   |||||||||||||||||||| || ||||||||||||    
T  6018452 gtttttggaggtgaaaatagagggtaggactaaaactgcaacaaaaatgataattgaa-gataattttgttctgttttaaaaggacatgaccagtttcgt 6018354  T
Q  150 gaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    || |||  ||||||||||  ||||||| |||||||||||    
T  6018353 gagtagaacaaaacacgagaaccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 13814133 - 13814226
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattga-----atgaccgttttgttctgttttaaaagggcagg 138  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||     ||||| ||||||||||| ||||||||||||||    
T  13814133 cgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcagg 13814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 14462769 - 14462683
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttg----gagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatga 110  Q
    ||||||||||||||||||||||||| ||    |||  | ||||| || |||||||||||||||||||||||||||||||||||||||    
T  14462769 ctaaaactgtcatttctctacgtttctgtctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatga 14462683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 10721945 - 10721873
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 101  Q
    ||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| ||||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 10721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 24325580 - 24325639
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggg 72  Q
    |||||||||| || |||||||||||||||||||||    || ||||||||||||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggagaataaaatggggg 24325639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 59
Target Start/End: Original strand, 14340793 - 14340823
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggag 59  Q
    |||||||||||||||||||||||||||||||    
T  14340793 ctaaaactgtcatttctctacgtttttggag 14340823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 16752757 - 16752711
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggag 59  Q
    |||||||||||||||||||||||| |||||||| | ||||| |||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggag 16752711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 50970647 - 50970824
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 18984295 - 18984117
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagccta 18984117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 5540194 - 5540364
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 29869796 - 29869619
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 15646571 - 15646741
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||| ||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 29307122 - 29306953
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 8678911 - 8679086
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
     |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 9019149 - 9018970
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||| ||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 9018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 21856412 - 21856588
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 17433392 - 17433216
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||||||| |  ||||||| ||| |||||||||||| || |||||||||||||||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 39154195 - 39154021
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| | |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||||||||||||||||| || ||||||||||| || ||||||||| || |||||||||||||||||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaag 39154021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 26859431 - 26859606
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    |||||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
     ||||||||||||||||||||||||  |||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagccta 26859606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 29307317 - 29307487
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||||||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 9019338 - 9019511
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||| |||||||||||||| |||||||| ||||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||| ||||| |||||||| |||| |||| |||||||||| ||||||||||||||||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 9019511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 17433597 - 17433758
Alignment:
Q  27 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||||||||||| ||||| || ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaag 17433758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 31 - 191
Target Start/End: Complemental strand, 50970437 - 50970276
Alignment:
Q  31 aaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaa 129  Q
    ||||||||||||||||| ||||| |||||  | ||||| |  |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  130 aagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 50970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 29870003 - 29870164
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |  ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||| ||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 52268430 - 52268289
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||  ||||||||| |||| ||||||||||||||||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 5539977 - 5539817
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||| | ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5539977 ctaaaactgccatttctatgcgtttatggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 5539878  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  5539877 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 5539817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 8678658 - 8678542
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 8678559  T
Q  172 caaaagtgtaattaagc 188  Q
    |||||||||||||||||    
T  8678558 caaaagtgtaattaagc 8678542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 21856203 - 21856039
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||| ||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagtctaa 21856039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    ||||| |||||||||||| ||||| |||||  | ||||| || ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 15173478 - 15173640
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  15173578 aaaa-ggcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 18984538 - 18984665
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 18984637  T
Q  163 cacgaagaccaaaagtgtaattaagcct 190  Q
    ||| | ||||||||||||||||||||||    
T  18984638 cacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 39154404 - 39154566
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||||||| ||||| || ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgtttt 39154503  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39154504 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 33144078 - 33143925
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgta 181  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgta 33143925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 15646353 - 15646190
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | ||| |||||  | |||||  | ||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgtttt 15646254  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  15646253 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 72 - 189
Target Start/End: Complemental strand, 26859176 - 26859059
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 171  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| | |||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  172 caaaagtgtaattaagcc 189  Q
    ||||||||||||||||||    
T  26859076 caaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 5962739 - 5962579
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||||||| ||||  |||| |||||  | ||||| || ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgtttt 5962640  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    |||||||| ||||||||||||||||||| ||| ||||||| |||||||| |||||||||||    
T  5962639 aaaagggccggaccagtttcgtgaatagaccataacacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  115 tttgttctgttttaa 129  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  73 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 172  Q
    |||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||| |||  |||| ||| || | |||||||||| ||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  173 aaaagtgtaattaag 187  Q
    |||||||||||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 103 - 192
Target Start/End: Original strand, 2733416 - 2733505
Alignment:
Q  103 ttgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| |||||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagcctaa 2733505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 47827033 - 47827141
Alignment:
Q  89 aacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    |||||||||||||||| || |||  ||||||||||||||||||||||| ||||| |||||||| |||||||||||| | ||| ||||||||| |||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtgt-attaagc 47827131  T
Q  189 ctaagtttaa 198  Q
    | || |||||    
T  47827132 caaaatttaa 47827141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 17112442 - 17112282
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||| ||| ||||| |||||  | ||||| || ||||||||||||||||||| |||||||||||||||| |||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||   |||| |||| ||| |||  ||||||| ||  ||||||||||||||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  114 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||||| | ||||||||||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 50419726 - 50419806
Alignment:
Q  109 gaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||  |||||||| |||||||||| |||||||| | || | |||  ||| ||||||||||| |||||||||    
T  50419726 gaccgttttgttcaattttaaaaaggcaggaccaatttcgtgagttggtctaaatgcgatgaccaaaagtgcaattaagcc 50419806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  19 gggggtaggtctaaaactgtcatttctctacgttt 53  Q
    ||||||||||||||||||||||||||||| |||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 156; Significance: 5e-83; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 4969 - 4790
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 4790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 75 - 187
Target Start/End: Original strand, 5222 - 5334
Alignment:
Q  75 aggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaa 174  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  175 aagtgtaattaag 187  Q
    |||||||||||||    
T  5322 aagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 5e-83; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 12234505 - 12234326
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagcctaa 12234326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 25447611 - 25447783
Alignment:
Q  19 gggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 51020973 - 51020794
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||||||| || || |||||||||||||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagcctaa 51020794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||| ||||||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 15523603 - 15523780
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
     ||||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 11153516 - 11153692
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 22434547 - 22434724
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaacctaa 22434724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 25937846 - 25937667
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagcctaa 25937667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 38962195 - 38962362
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaag 38962362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 22170306 - 22170482
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||| |||||||||| ||||||| || |||||| | |||| |||||||||| ||||||||||||||||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||| | |||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| | |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    | |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||| ||||||||||||  |||||||||||| |||  |||||||||||||||||||||||||||||||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 48526371 - 48526195
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||||||||  |||||||| ||| |||| ||||||||||  |||||||||||||||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 45082606 - 45082429
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||| |||||||||||||  ||||| ||||||| ||| ||||||||||| ||||||||| |||||||| |||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaacctaa 45082429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 54995437 - 54995614
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||| ||||||||||||||| |||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||| ||||||||||||| || ||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 20470895 - 20471062
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 195  Q
    ||||||| | |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 20471062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 27 - 189
Target Start/End: Complemental strand, 46193568 - 46193405
Alignment:
Q  27 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 22434340 - 22434179
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 25447408 - 25447247
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 23494872 - 23494991
Alignment:
Q  73 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 172  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  173 aaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||    
T  23494972 aaaagtgtaattaagcctaa 23494991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 15523395 - 15523233
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||||||||||||| ||||| | |||  | ||||| || ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 15523233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 45082808 - 45082969
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 4219943 - 4220107
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||| |||||||| |||||||| ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 4220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 54995230 - 54995067
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||||| ||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 54995131  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||| ||||| |||||||||| |||||||| |||||| |||||||||||||||||| ||||    
T  54995130 aaaagggtaggactagtttcgtgagtaggccaatacacgaggaccaaaagtgtaattaaaccta 54995067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 12234713 - 12234874
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | ||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12234812  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  12234813 aaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 48526565 - 48526723
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||||||||||||  |||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||| |||||||||||||| ||| ||||||||||| |||||||||| |||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaa 48526723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  113 gttttgttc 121  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 33109883 - 33110011
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||  |||||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  163 cacgaagaccaaaagtgtaattaagccta 191  Q
    || || |||||||||||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagccta 33110011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 25938090 - 25938217
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 25938189  T
Q  163 cacgaagaccaaaagtgtaattaagcct 190  Q
    ||| | ||||||||||||||||||||||    
T  25938190 cacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 11153307 - 11153145
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||| ||||| ||| |||| ||||||||||||||| |||||||||| |||||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 18763951 - 18764068
Alignment:
Q  75 aggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaa 174  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  175 aagtgtaattaagcctaa 192  Q
    ||||||||||||| ||||    
T  18764051 aagtgtaattaagtctaa 18764068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 51021180 - 51021342
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| || ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| |||||||| || |||||||||||| ||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgtttt 51021278  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||| |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  51021279 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 51021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||| ||| ||||| |||||  | ||||| || ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 2118419 - 2118295
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 2118320  T
Q  163 cacgaagaccaaaagtgtaattaag 187  Q
    ||| | |||||||||||||||||||    
T  2118319 cacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 20958266 - 20958403
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||| |||||    
T  20958266 cgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccattttcg 20958363  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||| |||||||||| |||| ||| ||||||||||||||||    
T  20958364 tgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 44892553 - 44892692
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||||||||| ||||| |||| |||||    
T  44892553 cgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaaccattttcg 44892652  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||| |||| |||||||||| |||||||| | |||||||||    
T  44892653 tgagtaggtcaaaacacgaggaccaaaaatataattaagc 44892692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt-aaaagggcaggaccagtttcgtgaataggccaaaacacgaaga 170  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||||||||| ||||||||||||||| ||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  171 ccaaaagtgtaattaagcc 189  Q
     ||||||||||||||||||    
T  35363128 tcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 48293734 - 48293592
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||  ||  ||||||| |||||||||  | ||||| || |||||    
T  48293734 cgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagagacaggatcaatttcg 48293635  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||| || |||||||||||| |||||||||||||||||||||||    
T  48293634 tgagtaagccaaaacacgaggaccaaaagtgtaattaagccta 48293592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 48294947 - 48295088
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacg-aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||||  |||| ||||| ||||    
T  48294947 cgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaatttc 48295046  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||| |||  |||||||||| |||||||| ||||||||||||    
T  48295047 gtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 43243686 - 43243803
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||| |||||    
T  43243686 cgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttcg 43243784  T
Q  149 tgaataggccaaaacacga 167  Q
    ||| |||||||||||||||    
T  43243785 tgagtaggccaaaacacga 43243803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 48708431 - 48708293
Alignment:
Q  53 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 152  Q
    ||||||| |||||||| | |||||||  | ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| || |||||||      
T  48708431 tttggaggataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggt 48708332  T
Q  153 taggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||   |||||||||||||||||||||||    
T  48708331 taggccaaaacacatggaccaaaagtgtaattaagccta 48708293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 191
Target Start/End: Original strand, 48713751 - 48713893
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||| ||| ||||| ||||     
T  48713751 cgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccattttca 48713850  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||| ||||| |||||||||  |  |||||||||||||| ||||    
T  48713851 tgagtaggctaaaacacgagaattaaaagtgtaattaaaccta 48713893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 44890657 - 44890518
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||| ||| ||||||||||||||| || |||||||||||||||||  |||||| || ||   ||||||||||||||||||||||| ||||| |||||    
T  44890657 cgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgaccattttcg 44890558  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    |||||||| |||||||| | |||||||| |||||||||||    
T  44890557 tgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 186
Target Start/End: Complemental strand, 16691072 - 16690939
Alignment:
Q  53 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 152  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||   ||||||| |||||||||  |||||||||| ||||||||     
T  16691072 tttggaggataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgag 16690973  T
Q  153 taggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||  |||||||| | |||||||| |||||||||    
T  16690972 tagatcaaaacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 172  Q
    |||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 43281198 - 43281313
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||  ||  |||||||||||||||||| |||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  151 aataggccaaaacacga 167  Q
    | |||||||||||||||    
T  43281297 agtaggccaaaacacga 43281313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 10258306 - 10258433
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||  ||  ||||  ||||||||||||||||||||||| |||| ||| ||||||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  163 cacgaagaccaaaagtgtaattaagcct 190  Q
    ||||| ||||||||||||||||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 20957327 - 20957196
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||  ||||||| ||||||||||| | | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaa 182  Q
    | || |||||||| ||| |||||||| |||||    
T  20957227 agtaagccaaaactcgaggaccaaaaatgtaa 20957196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 43242410 - 43242328
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaa 131  Q
    ||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43242410 cgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 16691481 - 16691616
Alignment:
Q  53 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 152  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||| |||||| || |||  ||||||| || ||||||  |||||||||| ||||||||     
T  16691481 tttggaggataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatg-tttaaagaggcaggaccattttcgtgag 16691579  T
Q  153 taggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||| ||||||||   || ||||||||||||||||||    
T  16691580 taggtcaaaacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 18751971 - 18752038
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacg 80  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggacg 18752038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 17504149 - 17503964
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||| |||| ||||| ||| |||||| ||  | |||     
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtt-taggacg 17504051  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaat 199  Q
    ||| |||||  ||| |||  |||||||||| ||||||||   || |||||  ||| |||||| ||| ||||||||||| | ||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaacagtataattaagccttaatttaat 17503964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 55189636 - 55189528
Alignment:
Q  81 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgt 180  Q
    ||||||| | ||||||||||||||||| |||  ||||||||| |||||||||||||  |||| |||  |||||||| |||||||||| || ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  181 aattaagcc 189  Q
    |||||||||    
T  55189536 aattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 44220782 - 44220861
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    ||||||||||| |||||||  ||||||| |||||||||| |||||||||||||| |||| |||  |||||||||||||||    
T  44220782 cgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgttt 53  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgttt 53  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 40160269 - 40160236
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcatttctc 40160236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 30597926 - 30598065
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaaggg-caggaccagtttc 147  Q
    ||||||||||   |||||| |||| |||||| |||| |||||||||||| |||||| |  |||  |||||||| | |||||||| | ||| |||| || |    
T  30597926 cgtttttggatgttaaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattcc 30598023  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||| | || |||||||||| ||||||||||||||| |||||    
T  30598024 gtgagttggtcaaaacacgaggaccaaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 55191181 - 55191318
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatga---taattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    ||||| ||| ||||||||  || ||| ||||||| ||||||||||||||   ||||| || |||  |||| |||| |||||||| |||| ||||| ||||    
T  55191181 tttttagaggataaaatgatggttagaacgaaaagtgcaacaaaaatgatagtaattaaaagacaattttattctattttaaaa-ggcatgaccattttc 55191279  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
     ||| || | ||||||||||| ||||||| | |||||||    
T  55191280 atgagtatgtcaaaacacgaaaaccaaaattataattaa 55191318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 4576 - 4754
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | ||||| |||  | ||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  128 aaaagggcaggaccagtttcgtg 150  Q
    |||||||||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 19830596 - 19830418
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 19830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 37786943 - 37786766
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 2659211 - 2659388
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagcctaa 2659388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 38858819 - 38858642
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| |||||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||||||||||| ||| |||| ||| ||||||||||| ||||||||||||||||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 35289272 - 35289448
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    |||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 35289448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 32004985 - 32005159
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||| ||||||||||||| |||||||||||||| || ||||||||| || |||||||||||||||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||| ||||| ||||| |||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 34534162 - 34534338
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 19590909 - 19591073
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagcctaa 19591073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 183
Target Start/End: Original strand, 23953105 - 23953268
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaat 183  Q
    |||||||| ||||||| ||||||||||||||| |||  |||||||||| |||||||| ||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatgtaat 23953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 191
Target Start/End: Original strand, 4478076 - 4478247
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||| |||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||| ||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaaccta 4478247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 38859025 - 38859189
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 38859189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 2659000 - 2658837
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| |||||||||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 34533952 - 34533789
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||||||| |||||||||||  | ||||| || ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34533789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 32004774 - 32004612
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||||||||||||| ||||| |||||  | ||||| || |||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 32004612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 31 - 192
Target Start/End: Original strand, 37787153 - 37787315
Alignment:
Q  31 aaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaa 129  Q
    ||||||||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  130 aagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||| |||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcctaa 37787315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 29100011 - 29099863
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||| ||||||||| ||| |  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaa 176  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaa 29099863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 35289019 - 35288903
Alignment:
Q  73 gtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 172  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  173 aaaagtgtaattaagcc 189  Q
    |||||||||||||||||    
T  35288919 aaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 38161091 - 38160948
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||  | |||||    
T  38161091 cgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattattttcg 38160992  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||    
T  38160991 tgagtaggccaaaacccgaggaccaaaagtgtaattaagcctaa 38160948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 28583577 - 28583437
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || |||||||||||||||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    | ||||||||||||||| |||||||||||||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagccta 28583437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 28584327 - 28584466
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||  |||||||||||||||||||| || ||||| |||||    
T  28584327 cgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttcg 28584426  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||||| ||||| ||| ||||||||||||||||    
T  28584427 tgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 19830804 - 19830965
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||||||||||||  |||| |||||  | ||||| || |||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 23952848 - 23952727
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaata-ggccaaaacacgaaga 170  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| || || |||||||||| ||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagga 23952749  T
Q  171 ccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||    
T  23952748 ccaaaagtgtaattaagcctaa 23952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| ||  ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||| ||||||||||   |||| ||||||||||||||| ||||||||||||||||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 35579074 - 35578902
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| ||||||||||| |||||||||||| ||||| |||||   ||||| ||  ||||||  |||| ||||| ||| |||||| ||  |||||     
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtt-tatgacg 35578976  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||  ||| |||  |||||||||| ||| ||||   || |||||  | | ||||||||||||||||||    
T  35578975 gttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaagtgtaattaa 35578902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 35579256 - 35579344
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgata 101  Q
    |||||||||||||||||||||||||| ||||| || ||||||| |||   ||||| || |||| ||| |||| ||||| ||| ||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgata 35579344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgttttt 55  Q
    |||||||||||||||||||||||||||| |||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 2e-82; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 20741276 - 20741098
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 10900299 - 10900475
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||| |||||||||||||||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 11276951 - 11277127
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 18257313 - 18257135
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagccta 18257135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 15828010 - 15828187
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||| ||||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 28472812 - 28472634
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     |||||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 28472634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 29860001 - 29859823
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     |||||||||||||||||| |||||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 29859823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 12935528 - 12935704
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||| || ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagccta 12935704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 11445163 - 11444984
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     |||| |||||||||||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11444984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 1149802 - 1149977
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttt-tggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccg 113  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  114 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||| ||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||||||||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 2319832 - 2319669
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagcctaa 2319669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgtttt-ggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||||||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 13 - 188
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| ||| | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    |||||||| |||||||||||||||||| ||||||||||| ||| ||||||||||| |||||||||| |||||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 12935318 - 12935154
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 12935154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 11445371 - 11445535
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11445535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 22219737 - 22219901
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||||||||||||  |||| |||||  | ||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 22219901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 23075512 - 23075675
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | |||||||||  ||||| | || ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 23075675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 23074164 - 23073998
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||           ||||||||| ||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 4811535 - 4811372
Alignment:
Q  26 ggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    ||||||||||||| |||| ||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||| |||||||||||||| ||| |||||| ||   |||||||||||||||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 18505080 - 18504922
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||||| ||| | |||  | ||||| || |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  18505080 ctaaaactgtcatttctctacatttctagagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgtttt 18504981  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  18504980 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 31470476 - 31470314
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||| ||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 18257521 - 18257682
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||||||| | |||||    |||||  | |||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  18257521 ctaaaactgtcatttctctacgtgtatggagttggaaaatatgaggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgtttt 18257620  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||    
T  18257621 aaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 20741485 - 20741650
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaa---atgataattgaatgaccgttttgttctgt 124  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || ||||||||||||||||||| ||||   |||||||||||| ||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  125 tttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 11276760 - 11276589
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||| ||||||||||||||||||| |||||||||||  | ||||| || |||||||||||||||| ||||||||||| ||||||| |||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||| |||| ||||||| ||| ||| ||||||||||  ||| ||| ||||||||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 29033575 - 29033436
Alignment:
Q  49 cgtttttggag-aataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    ||||||||||| || |||||||||||||||| ||||  ||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| ||||    
T  29033575 cgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatttc 29033476  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||  ||||||||| |||| |||||||||||||||||||    
T  29033475 gtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 186
Target Start/End: Original strand, 3835135 - 3835268
Alignment:
Q  53 tttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaa 152  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| || |||  |||||||||||||||||  |||||||||| ||||||||     
T  3835135 tttggaggataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgag 3835234  T
Q  153 taggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||| ||||||||   ||||||||||||||||||    
T  3835235 taggtcaaaacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 15827766 - 15827639
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt--tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaa 160  Q
    ||||| || |||||||||||||||||||||||||||||| ||||| ||||||  |||||| |||||||||||| ||| ||||||||||||| || |||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaa 15827667  T
Q  161 aacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||| ||||||||||||||||||||    
T  15827666 aacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 29035042 - 29035180
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| | ||||||| |||| ||||||||||||||||||||||||||| | || |||  |||||||||||||||||||||||  |||| |||||    
T  29035042 cgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaatttcg 29035141  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||| ||||| ||||||||| ||| |||||||||||||||    
T  29035142 tgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 18296284 - 18296142
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||  | || ||| |    
T  18296284 cgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaattttg 18296186  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||| || | |||||||||| ||| |||| | |||||||||||||    
T  18296185 tgagtaagtcaaaacacgaggactaaaattataattaagcctaa 18296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 1149553 - 1149463
Alignment:
Q  101 aattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 1149463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 4811675 - 4811801
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||| ||| ||||||||||    
T  4811675 aaaataggaggtatgatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaa 4811774  T
Q  163 cacgaagaccaaaagtgtaattaagcc 189  Q
    ||||| || ||||||| ||||||||||    
T  4811775 cacgaggatcaaaagtataattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  14 gcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 96  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 22534214 - 22534270
Alignment:
Q  133 ggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||| |||||||| | || ||||| |||| |||||||||||||||||||||    
T  22534214 ggcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 32836367 - 32836407
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgttt 53  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgttt 32836407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 8e-82; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 12572040 - 12571855
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggt-aggacgaaaaatgcaacaaaaatgataattgaatgac 111  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  112 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttta 197  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaaattta 12571855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 19176659 - 19176838
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 44831614 - 44831799
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtttaa 198  Q
    |||||||||||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||| ||||||||||| |||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctaattttaa 44831799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 41681306 - 41681132
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgtt 115  Q
    |||||||||| || |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  116 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 41681132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 185  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 31133396 - 31133213
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 196  Q
    |||||||| |||||||||||||| ||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| ||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctatgttt 31133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 9930026 - 9930203
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
     ||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 11656630 - 11656452
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccg 113  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  114 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 11656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 9178005 - 9178180
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||| || || |||||||||||||||||||||| ||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 13225023 - 13225185
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 19176451 - 19176287
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||||||| ||||| |||||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 19176287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 44831408 - 44831246
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 41681562 - 41681679
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggac 41681661  T
Q  172 caaaagtgtaattaagcc 189  Q
    ||||||||||||||||||    
T  41681662 caaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 33743082 - 33742919
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| ||| | || ||||| || |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 33742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 142
Target Start/End: Original strand, 33743290 - 33743417
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  115 tttgttctgttttaaaagggcaggacca 142  Q
    ||||||||||||||||| ||||| ||||    
T  33743390 tttgttctgttttaaaaaggcagaacca 33743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||      ||||||||| ||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||| | |||||||||||||  ||||||||| |||||||| ||| ||||||||||| || |||||||||||||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 9929070 - 9928912
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||  || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 9928971  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  9928970 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 11656841 - 11657003
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 11656940  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||| | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11656941 aaaaggccgggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 34540967 - 34541096
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  34540967 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 34541066  T
Q  163 cacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||| ||||||||||||||||||||||||    
T  34541067 cacgaggaccaaaagtgtaattaagcctaa 34541096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 30 - 188
Target Start/End: Original strand, 31133605 - 31133764
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||| ||||||||||| | ||| |||||  | ||||| || |||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  31133605 taaaaccgtcatttctctgcatttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgtttta 31133704  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31133705 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 12572235 - 12572393
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12572334  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||| ||| ||| |||||||||| ||| ||||||||||| ||||||||||||||||||    
T  12572335 aaaagagcatgactagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 187
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||||| ||| ||| |||||||||| ||||| ||||||||| |||||||||| ||||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  81 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgt 180  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  181 aattaagccta 191  Q
    |||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 4629952 - 4629795
Alignment:
Q  35 ctgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 133  Q
    ||||||||||| | ||||| |||||  | ||||| || |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  4629952 ctgtcatttctttgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagg 4629853  T
Q  134 gcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||| ||||||||||||  |  ||||||| |||||||||||    
T  4629852 gcaggaccagtttcgtgaatatgccaaaacacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 190
Target Start/End: Original strand, 8073957 - 8074097
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    |||||||||||  ||||||||||| |  |||| |||||||||||||| ||||||||||| ||   |||||||||||||||||||| || || || |||||    
T  8073957 cgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatcattttcg 8074055  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  8074056 tgaataggccaaaacacgaggaccaaaagtataactaagcct 8074097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 10918264 - 10918123
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||||||| ||||| |||  ||||| ||||||||||   |||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    | |||  |||||||||| ||| |||| ||||||||| |||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaaacctaa 10918123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 43958325 - 43958267
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaa 107  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  43958325 cgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaa 43958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 9177793 - 9177724
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaat 97  Q
    ||||||||||||||||||| ||||| |||||  | |||||||| ||| ||| ||||||||||||||||||    
T  9177793 ctaaaactgtcatttctcttcgtttctggagtttgaaaatgggaggtgggatgaaaaatgcaacaaaaat 9177724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 191
Target Start/End: Complemental strand, 9177700 - 9177665
Alignment:
Q  156 gccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||| |||||||||||||||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagccta 9177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Complemental strand, 18805337 - 18805304
Alignment:
Q  14 gcatagggggtaggtctaaaactgtcatttctct 47  Q
    |||||||||||| |||||||||||||||||||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctct 18805304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 43958254 - 43958206
Alignment:
Q  144 tttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||| |||  ||||||||||||||||||||| |||||||| ||||    
T  43958254 tttcgtgagtagatcaaaacacgaagaccaaaagtataattaagtctaa 43958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 39555946 - 39556122
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 31779021 - 31779199
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 31779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 5137156 - 5136978
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| ||||| |||||||| | ||||||||||||| |||||||||||||||||| ||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaaccta 5136978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 20840734 - 20840556
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaag 193  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaag 20840556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 24300925 - 24301104
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||| |||||||||| |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 24301104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 37727105 - 37726928
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||| |||||||||||||||| ||||||||||| |  || ||||||||||| ||||||||||||||||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 23644638 - 23644461
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||| |||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 34 - 192
Target Start/End: Complemental strand, 48453144 - 48452986
Alignment:
Q  34 actgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagg 133  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  134 gcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagcctaa 48452986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 26837725 - 26837903
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||| |||| ||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 30104657 - 30104479
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||| | || ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcctaa 30104479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 32535330 - 32535508
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaat-----gataattgaatg 109  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     |||||||||| |    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  110 accgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 25853596 - 25853770
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
     |||||||||||||||||| | || |||||||||||||| |||  |||||||||| || ||||||||||||||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaag 25853770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 27393946 - 27394123
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||| || |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 20 - 189
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||||  | || |||||||| |||| |||||||||| |||||||||||||||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||| ||||||| | | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 185  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 43973824 - 43973988
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| ||| | || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 43973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 17464652 - 17464488
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||| ||||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 17464553  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17464552 aaaagggcatgaccagtttcgcgaataggccaaaacacgaggaccaaaagtgtaattaagcctaa 17464488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 26274936 - 26275114
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| |||||||| | | |||||| | ||||||| |||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaattataattaaacctaa 26275114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 17464860 - 17465038
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaa-atgcaacaaaaatgataattgaatgac 111  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  112 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||| |||||||||||   |||||||||| ||  ||||||||||||||| |||||||| |||||||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 37727314 - 37727475
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 20840945 - 20841107
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 27393822 - 27393660
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| ||| |  | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||| |||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 29801798 - 29801964
Alignment:
Q  27 gtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 125  Q
    |||||||| |||||||||||| ||||| |||||  | ||||| || ||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  126 ttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagcctaa 29801964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 39555739 - 39555577
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 4275748 - 4275911
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4275911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 31778814 - 31778652
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 25612382 - 25612519
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||| |||||    
T  25612382 cgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttcg 25612481  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||| |||| |||||||||| ||||||||||||||||||    
T  25612482 tgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 189
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||  | |||  | ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||| ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 25853395 - 25853234
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 5137365 - 5137529
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || | |||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||| ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 5137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 30098147 - 30098309
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||| ||||| ||||| || ||  | ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 30098246  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||| |||||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  30098247 aaaagggcaagaccagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  68 ggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 167  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  168 agaccaaaagtgtaattaagcc 189  Q
     |||||||||||||||||||||    
T  29801377 tgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 22424975 - 22424811
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | ||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||| ||| ||||||||||| | |||||  ||||||||  |||||||||||||||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagcctaa 22424811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 32535085 - 32534962
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| || |||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaa 32534986  T
Q  163 cacgaagaccaaaagtgtaattaa 186  Q
    ||||| ||||||||||||||||||    
T  32534985 cacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 50116814 - 50116954
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||| |||||    
T  50116814 cgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaatttcg 50116913  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||| || | |||||||||| || ||||||||||||||||||    
T  50116914 tgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 26837521 - 26837358
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||| |||||||| |||||||||| || | |||||||| ||||||||| ||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaaccta 26837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || ||| ||||||||| ||||||||||||||||||||||  |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacg-agaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 23228414 - 23228552
Alignment:
Q  50 gtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgt 149  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| |||  |||||||| |||||||||||||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  150 gaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    || ||||||||||||||  |||||||||||||||||||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagcc 23228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 186
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||||||||  || ||||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 41047083 - 41047239
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggac-gttttattctgtttt 41047181  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||| ||| ||||||||||||| |||||||||||| ||||| | |||||||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaacatgaaga-cgaaagtgtaattaa 41047239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 32697105 - 32697244
Alignment:
Q  48 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||  ||  ||||||||||||||||||||||  ||| | ||||    
T  32697105 acgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttc 32697203  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    |||| ||||| ||||||||| |||||||| | |||||||||    
T  32697204 gtgagtaggctaaaacacgaggaccaaaaatataattaagc 32697244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 51474738 - 51474882
Alignment:
Q  49 cgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    ||||||||||| |||||| | |||||||||||||||||||||||||||||||||| | || |||  ||||||| ||||||||||||||| ||||| ||||    
T  51474738 cgtttttggaggataaaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttc 51474837  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||| || |||||||||||   |||||||||||||||||||||||    
T  51474838 gtgagtatgccaaaacacgggaaccaaaagtgtaattaagcctaa 51474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  75 aggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaa 174  Q
    ||||| |||| |||||||||||||||||  ||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  175 aagtgtaattaagc 188  Q
    ||||||||||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 37220697 - 37220555
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||||||||||||| |||| |||  |||| |||||||||||||| ||| || |  | | |    
T  37220697 cgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatattg 37220598  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||| |||||||||| |||| |||||||||||||||||||||||    
T  37220597 tgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 37220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 45966076 - 45965936
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    ||||||||| | |||||||||| ||| ||||||||||||||| |||||||||| ||| |||  ||||||| ||||||||||| ||||||  |  ||||||    
T  45966076 tttttggaggagaaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtg 45965977  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    | || |||||||||||| |||||||||||||||||||||||    
T  45965976 agtatgccaaaacacgaggaccaaaagtgtaattaagccta 45965936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 187
Target Start/End: Original strand, 25420548 - 25420684
Alignment:
Q  51 tttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtg 150  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| ||||||||| |||  |||| |||| ||||||||||||  || || |||||||    
T  25420548 tttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaatttcgtg 25420647  T
Q  151 aataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    | |||| ||||| |||| || ||||||||||||||||    
T  25420648 agtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 18010162 - 18010265
Alignment:
Q  61 ataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaa 160  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| | |||| |||||||| ||| | ||    
T  18010162 ataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagtagacgaa 18010261  T
Q  161 aaca 164  Q
    ||||    
T  18010262 aaca 18010265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 25419284 - 25419145
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa-tgataattgaatg-accgttttgttctgttttaaaagggcaggaccagttt 146  Q
    |||||||||||  |||||||||||  ||||| |||| ||||| ||||| ||||||||||| | || ||||||||||||||||||||||||| || | |||    
T  25419284 cgtttttggag--taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaattt 25419187  T
Q  147 cgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||| || || |||||||||||||||||||| |||| ||||    
T  25419186 cgtgagtaagctaaaacacgaagaccaaaagtataatcaagc 25419145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 37222040 - 37222118
Alignment:
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||| |||||||||||||||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagccta 37222118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 23227396 - 23227261
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||||||| ||||| | |||   |||||||||||| |       ||||||| |||||    
T  23227396 cgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccattttcg 23227303  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||| || ||||||||||  ||||||||||| ||||| |||||    
T  23227302 tgagtaagccaaaacacagagaccaaaagtctaattgagcct 23227261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 49407972 - 49407793
Alignment:
Q  12 tagcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgac 111  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||   ||||| || |||| ||| |||| ||  ||||||   | | || |  |||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaataggaggtatgactaaaactg-tacaaaacataaagtttagggac 49407874  T
Q  112 cgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     |||||||||| ||| |||  |||| ||||| ||||||||   || |||||  ||| ||||||||||||||||||||||||    
T  49407873 ggttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 49407793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 55192293 - 55192222
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaa 84  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| || |||||||| ||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaa 55192222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggg 73  Q
    |||||| | |||| ||||||||||||||||||||| | |||||| ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 27200062 - 27200240
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| |||||||||||||| ||||||||||||| ||||| |||||   ||||| || |||| ||| |||| ||||| ||| |||||| ||  | |||     
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtt-taggacg 27200160  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    || ||||||  ||| |||  ||||| |||| ||||||||   || |||||  | | ||||||||||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatgcaaggaccaaaagtgtaattaagcctaa 27200240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 37075864 - 37075781
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaa 96  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||   |||||  | |||||||| |||| ||||| |||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaa 37075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 32695830 - 32695706
Alignment:
Q  62 taaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaa 161  Q
    ||||||| |||  ||||| |||| |||||||||||| ||||| | | |||  |||||||||||||||||| | ||  | || |||||| | |||||||||    
T  32695830 taaaatgagggtaaggactaaaattgcaacaaaaataataatcgtaggacaattttgttctgttttaaaaagacataatcaatttcgtaagtaggccaaa 32695731  T
Q  162 acacgaagaccaaaagtgtaattaa 186  Q
    | | || |||||||| |||||||||    
T  32695730 atatgaggaccaaaaatgtaattaa 32695706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 52375824 - 52375880
Alignment:
Q  136 aggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||| |||||||| | || |||||  ||| ||||||||||||||||||||||||    
T  52375824 aggaccattttcgtgagttggtcaaaatgcgaggaccaaaagtgtaattaagcctaa 52375880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 55390090 - 55390146
Alignment:
Q  136 aggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||| |||||||||| ||  ||||  ||| ||||||||||||||||||||||||    
T  55390090 aggaccattttcgtgaattggttaaaatgcgaggaccaaaagtgtaattaagcctaa 55390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 11090695 - 11090519
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 11090519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 239528 - 239350
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  239428 gttttgttctgttttaaaa-ggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcctaa 239350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 40027316 - 40027139
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 43058509 - 43058333
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||| |||||||||||||| |||| | ||||||||||||| || ||||||||||||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 18451200 - 18451379
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 18451379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 40815714 - 40815893
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctaa 40815893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 22374496 - 22374318
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| || ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 1978284 - 1978106
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 26538273 - 26538096
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    | ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 28616788 - 28616613
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgttttt-ggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccg 113  Q
    |||||||||||||||||||||||  |||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  114 ttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  16 atagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgtt 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  116 ttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||| | ||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 26538454 - 26538627
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||||||||||||||||||||||| ||||| ||| |  | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 26538627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 3025641 - 3025463
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||| || |||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaatcaaacctaa 3025463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgt 119  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  120 tctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||| ||||||||||||||||||| |||||||| ||| ||||||||| |  |||||||||||||||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 7446519 - 7446341
Alignment:
Q  15 catagggggtaggtctaaaa----ctgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatga 110  Q
    ||||||||||| ||||||||    ||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  111 ccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||| || |||||||||||||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 49 - 190
Target Start/End: Complemental strand, 20444889 - 20444748
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  20444889 cgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttcg 20444790  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||| | ||||||||||||| ||||||||||||||||||||||    
T  20444789 tgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 7446730 - 7446894
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| |||||||||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||||||||||||||| || | |||||||||| || ||||| |||||||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagcctaa 7446894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 49 - 192
Target Start/End: Original strand, 20440437 - 20440579
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20440437 cgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 20440535  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||| | ||||||||||||| ||||||||||||||||||||||||    
T  20440536 tgagttggccaaaacacgaggaccaaaagtgtaattaagcctaa 20440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 29 - 190
Target Start/End: Complemental strand, 18450991 - 18450829
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  | ||||| || |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 40815506 - 40815338
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaataaaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| |||||  ||||| | || ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagttt 196  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagacaaagttt 40815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 22374709 - 22374872
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| | ||| | |||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 186
Target Start/End: Original strand, 40027524 - 40027682
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| |||||| || ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 40027623  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  40027624 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 49 - 188
Target Start/End: Original strand, 35781068 - 35781207
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||| |||||    
T  35781068 cgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttcg 35781167  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||| ||||||||||||||| || |||||||||||||||||    
T  35781168 tgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 35779848 - 35779708
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||| |||||||||| |||||    
T  35779848 cgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggaccattttcg 35779749  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||| || | |||||||||| |||||||||||||||||||||    
T  35779748 tgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 43058717 - 43058880
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctaa 43058880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 11090904 - 11091067
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||| |||||||| ||| ||||| |||||  | ||||| || | ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11091067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 190
Target Start/End: Original strand, 28616998 - 28617160
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||  |||||||| ||||| |||||  | ||||| || |||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 28617097  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  28617098 aaaaggacagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 239736 - 239896
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||| ||||||||| ||||| |||||  | ||||| || |||| ||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||| |||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaactaagc 239896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 63 - 191
Target Start/End: Original strand, 1978528 - 1978656
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  163 cacgaagaccaaaagtgtaattaagccta 191  Q
    ||| | |||||||||||||||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagccta 1978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 28847123 - 28847242
Alignment:
Q  72 ggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagac 171  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||| |||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  172 caaaagtgtaattaagccta 191  Q
    ||||| ||||||||||||||    
T  28847223 caaaaatgtaattaagccta 28847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 8972377 - 8972239
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||| ||||| |||||    
T  8972377 cgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgaccattttcg 8972278  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||  | |||||||||||| |||||||||||||||||||    
T  8972277 tgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||||||||||||| | ||| |||||  | ||||| || ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgtttta 8425416  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||| || | ||||| |||||||| ||||||||||||| | ||||||||||||||||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 189
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  30 taaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 128  Q
    |||||||||||||||||| | ||| |||||  | ||||| || |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  129 aaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||| |||| |||||||| || |||||||||||| |||||||| ||||||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 187
Target Start/End: Original strand, 15552458 - 15552596
Alignment:
Q  48 acgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttc 147  Q
    ||||||||||||   ||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||| || ||||    
T  15552458 acgtttttggagggcaaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttc 15552556  T
Q  148 gtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||| ||||||||||||  | |||||||||||||||||||    
T  15552557 gtgagtaggccaaaacattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 15551639 - 15551501
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||| |||  ||||||| |||||||||| |||| ||||| |||||    
T  15551639 cgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccattttcg 15551540  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    ||| ||  ||||||||||| |||||||||||||||||||    
T  15551539 tgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 14432525 - 14432689
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    ||||||||||||||||||| ||||| | |||  | ||||| || ||||||| |||||||||||||||||| |||||||||  ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||| |||| |||||||||| ||| ||||||||||||||| |||||||| |||||||||| ||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaaggctaa 14432689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 28143400 - 28143578
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || |  |||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
     ||||||||  ||| |||  |||||||||| ||||||||   || |||||  ||| ||||||||||| ||||||||||||    
T  28143499 attttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagcctaa 28143578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 16195057 - 16195029
Alignment:
Q  190 taagtttaatacatgttacacttacatga 218  Q
    |||||||||||||||||||||||||||||    
T  16195057 taagtttaatacatgttacacttacatga 16195029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 1841 - 1665
Alignment:
Q  15 catagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgt 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagccta 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 2051 - 2218
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||| |||||||||| ||||| |||||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaagtt 195  Q
    |||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcctaagtt 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 134042 - 134221
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    |||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctaa 134221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 64478 - 64301
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||||||||| ||||| ||||||||||| || | |||||||||| ||||||||||||||||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  74 taggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagacca 173  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  174 aaagtgtaattaa 186  Q
    |||||||||||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||   ||||| ||  ||||||| |||| ||||| ||| |||||| || |  |||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||  ||| |||  |||||||||| |||||||| | || |||||   || ||| |||||||||||||||    
T  205837 gttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 139; Significance: 7e-73; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 928 - 755
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaag 187  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 1116 - 1286
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    ||||| |||||||||||| ||||| ||| ||||| ||| |  | ||||| || |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 192
Target Start/End: Original strand, 42528 - 42706
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| ||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcctaa 192  Q
    ||||||||||||||||||||||||| | ||||||| ||| ||| ||||||||||| | |||||||| |||||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagcctaa 42706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  20 ggggtaggtctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 118  Q
    |||||||||||||||||||||||||||| ||||| || ||  | ||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  119 ttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||||||||||||| ||||||| ||||||||||| ||| |||||||||||  || ||||||||||||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    |||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    |||||||||||||||||||||| |  ||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 10039 - 9935
Alignment:
Q  82 aaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgta 181  Q
    |||||| ||||||| ||||||||||| |||| ||||||||| | ||||||||||| || ||||||||||||||||| ||||||||| |||||||| ||||    
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  182 attaa 186  Q
    |||||    
T  9939 attaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 10797 - 10643
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  113 gttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacga 167  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacga 10643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 11042 - 11168
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 11141  T
Q  163 cacgaagaccaaaagtgtaattaagcc 189  Q
    ||||| |||||||||||||||||||||    
T  11142 cacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 22 - 190
Target Start/End: Complemental strand, 19001 - 18834
Alignment:
Q  22 ggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttc 121  Q
    |||| |||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  122 tgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 190  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  | ||||||||||||||| ||||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  92 aaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcc 189  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 190
Target Start/End: Original strand, 28662 - 28789
Alignment:
Q  63 aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaa 162  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  163 cacgaagaccaaaagtgtaattaagcct 190  Q
    ||||| ||||||||||||||||| ||||    
T  28762 cacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  13 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 112  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  113 gttttgttc 121  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  29 ctaaaactgtcatttctctacgtttttggagaat-aaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 127  Q
    |||||||||| |||||||| ||||| |||||  | ||||| || |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  128 aaaagggcaggaccagtttcgtgaataggccaaaacacgaagacc 172  Q
    |||| ||| ||| ||||||||||| || | |||||||||| ||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 49 - 188
Target Start/End: Complemental strand, 707 - 568
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| || ||||||| |||  |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| || || |||||    
T  707 cgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcattttcg 608  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaagc 188  Q
    ||| ||||||||||||||| || |||||||||||||||||    
T  607 tgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 186
Target Start/End: Original strand, 61863 - 62000
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||||||| | ||||||||||||||||||||||||  ||||||||||||| ||||||||   ||||||||| ||||||||||| ||||||| |||||    
T  61863 cgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggaccattttcg 61962  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaattaa 186  Q
    ||| ||| ||||||||||| || |||||||||||||||    
T  61963 tgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 61102 - 61026
Alignment:
Q  115 tttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagccta 191  Q
    |||||||| |||||||| ||||||| || |||||||| ||||||||||||||| || |||||||||| |||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagccta 61026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 588 - 454
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcg 148  Q
    ||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||| |||  || |||| |||||||||||  || ||||| |||||    
T  588 cgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttcg 490  T
Q  149 tgaataggccaaaacacgaagaccaaaagtgtaatta 185  Q
    ||| |||||||||||||||||||||||| ||||||||    
T  489 tgagtaggccaaaacacgaagaccaaaa-tgtaatta 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  86 tgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggaccagtttcgtgaataggccaaaacacgaagaccaaaagtgtaatta 185  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  186 a 186  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 7693 - 7784
Alignment:
Q  49 cgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcaggac 140  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||    
T  7693 cgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaagggaaggac 7784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University