View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14324_low_13 (Length: 246)
Name: NF14324_low_13
Description: NF14324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14324_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 6138719 - 6138933
Alignment:
| Q |
19 |
acttctgctacttggtctccactttatagtcctcctcgtggtacaataggtctttttgaagatgatcgtccaattccatatcataatgcacctcattctg |
118 |
Q |
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| T |
6138719 |
acttctgctacttggtctccactttatagtcctcctcgtggtacaataggtctttttgaagatgatcgtccaattccatatcataatgcacctcattctg |
6138818 |
T |
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| Q |
119 |
attttctcactgagcctctcgatattcctagcatgttacgtcgtcaagagcatcctaggacaaacttcaatataggaagacacgatccttctcctgcttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
6138819 |
attttctcactgagcctctcgatattcctagcatgttatgtcgtcaagagcatcctaggacaaacttcaacataggaagacacgatccttctcctgcttc |
6138918 |
T |
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| Q |
219 |
tagatccgcctatgc |
233 |
Q |
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||||||||||||||| |
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| T |
6138919 |
tagatccgcctatgc |
6138933 |
T |
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