View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14324_low_6 (Length: 359)
Name: NF14324_low_6
Description: NF14324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14324_low_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 19 - 359
Target Start/End: Original strand, 37167875 - 37168215
Alignment:
| Q |
19 |
cgaggaggaggaactgagattcccacatgaannnnnnnatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttca |
118 |
Q |
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| T |
37167875 |
cgaggaggaggaactgagattcccacatgaatttttttatatatgtgttgtcttgatgcagttgttacgttaattaattgtttttattgatgaattttca |
37167974 |
T |
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| Q |
119 |
ttattgtttcatgtattaaattaacttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgcttttgttatctagtttattgtttt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37167975 |
ttattgtttcatgtattaaattaacttataatctaatctaaatacgtaaagaacatgaaagaaattaagatgctgcttttgttatctagtttattgtttt |
37168074 |
T |
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| Q |
219 |
aagttggtagcatgatgtcacagtggtcttcagcagatcgtagtttattgtaaatcaaggttgagttcctgtctaatgtaacatatattgtcctattgtc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
37168075 |
aagttggtagcatgatgtcacagtggtcttcagcagatcgtagtttattgtaaatcaaggttgagttcctgtctaatgtaacatattttgtcctattgtc |
37168174 |
T |
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| Q |
319 |
ggcctatcaaaatagcgggaatattggtcagtgttttcttt |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
37168175 |
ggcctatcaaaatagcgggaatattggtcagtgttttcttt |
37168215 |
T |
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