View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14325_high_14 (Length: 240)
Name: NF14325_high_14
Description: NF14325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14325_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 40459943 - 40459720
Alignment:
| Q |
1 |
cccaatgcctagtggagtgattccttttcctttcagaagtcctttcttccatgcctttgatttgcttttcagcgttgctttatgctccctttaagtaaca |
100 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40459943 |
cccaatgcctaggggagtgattccttttcctttcagaagtcctttcttccatgccttggatttgcttttcagcgttgctttatgctccctttaagtaaca |
40459844 |
T |
|
| Q |
101 |
ctcggcccgcgggcatgacctcttgcattgagattgccgacttatgagctaaagactcattgaagtgtcatgcttttcaagccgttctgaaaagctccca |
200 |
Q |
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|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40459843 |
ctcggctcgcgagcatgacctcttgcattgagattgccgacttatgagctaaagactcattgaagtgtcatgcttttcaagccgttctgaaaagctccca |
40459744 |
T |
|
| Q |
201 |
atatttcttaatttgggttggata |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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|
| T |
40459743 |
atatttcttaatttgggttggata |
40459720 |
T |
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