View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14325_low_13 (Length: 293)
Name: NF14325_low_13
Description: NF14325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14325_low_13 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 40 - 275
Target Start/End: Complemental strand, 25742117 - 25741882
Alignment:
| Q |
40 |
tctgcggcatagtcgccggtaagccctaccaatacatccaatgctaccaaaacaaaaaactcattccaccaatactccccaacgtttcatttcagtccat |
139 |
Q |
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| T |
25742117 |
tctgcggcatagtcgccggtaagccctaccaatacatccaatgctaccaaaacaaaaaactcattccaccaatactccccaacgtttcatttcagtccat |
25742018 |
T |
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| Q |
140 |
atccggtggccggagcttcttctgcggcctccggtctaatggactcagcctacactgttggaacacaaggacacggaagtcttttctcaaacctaaaagg |
239 |
Q |
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| T |
25742017 |
atccggtggccggagcttcttctgcggcctccggtctaatggactcagcctacactgttggaacacaaggacacggaagtcttttctcaaacctaaaagg |
25741918 |
T |
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| Q |
240 |
gtgtatcatagtgaaaatgttgagttgagtgatgta |
275 |
Q |
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| T |
25741917 |
gtgtatcatagtgaaaatgttcagttgaatgatgta |
25741882 |
T |
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