View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14325_low_2 (Length: 611)

Name: NF14325_low_2
Description: NF14325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14325_low_2
NF14325_low_2
[»] chr4 (57 HSPs)
chr4 (247-600)||(29996514-29996860)
chr4 (17-175)||(29996370-29996525)
chr4 (418-468)||(27368191-27368241)
chr4 (420-468)||(9201648-9201696)
chr4 (418-470)||(23297433-23297485)
chr4 (184-243)||(46283182-46283241)
chr4 (327-394)||(48591372-48591439)
chr4 (204-245)||(22525446-22525487)
chr4 (425-461)||(48591470-48591506)
chr4 (204-243)||(11491215-11491254)
chr4 (204-243)||(40406956-40406995)
chr4 (418-468)||(8057127-8057177)
chr4 (201-239)||(17329116-17329154)
chr4 (186-236)||(43084514-43084564)
chr4 (205-243)||(43362165-43362203)
chr4 (418-468)||(43415328-43415378)
chr4 (205-243)||(45847923-45847961)
chr4 (353-394)||(43983356-43983397)
chr4 (418-470)||(212987-213038)
chr4 (418-470)||(948067-948119)
chr4 (418-470)||(3564215-3564267)
chr4 (424-468)||(4603376-4603420)
chr4 (418-470)||(8130483-8130535)
chr4 (326-394)||(11256608-11256676)
chr4 (418-470)||(12495685-12495737)
chr4 (420-468)||(19298175-19298223)
chr4 (326-385)||(897050-897109)
chr4 (418-461)||(7148776-7148819)
chr4 (327-394)||(7148843-7148910)
chr4 (204-243)||(16556511-16556550)
chr4 (327-394)||(23297506-23297573)
chr4 (418-461)||(28074369-28074412)
chr4 (423-470)||(29877634-29877681)
chr4 (327-394)||(31022471-31022538)
chr4 (418-461)||(36740908-36740951)
chr4 (204-243)||(36993101-36993140)
chr4 (417-460)||(55638119-55638162)
chr4 (423-461)||(825686-825724)
chr4 (204-242)||(22096387-22096425)
chr4 (185-239)||(25234835-25234889)
chr4 (185-243)||(29430557-29430615)
chr4 (207-245)||(44251326-44251364)
chr4 (420-470)||(48238177-48238227)
chr4 (205-243)||(48404134-48404172)
chr4 (420-461)||(3966734-3966775)
chr4 (418-470)||(42611906-42611959)
chr4 (424-469)||(43740120-43740165)
chr4 (424-461)||(46176023-46176060)
chr4 (418-470)||(1374402-1374454)
chr4 (208-243)||(10098185-10098221)
chr4 (429-461)||(19414133-19414165)
chr4 (420-468)||(22117351-22117399)
chr4 (424-460)||(22303101-22303137)
chr4 (420-468)||(30956783-30956830)
chr4 (418-454)||(35010222-35010258)
chr4 (201-245)||(35909021-35909065)
chr4 (204-236)||(49811404-49811436)
[»] chr5 (50 HSPs)
chr5 (327-385)||(28357221-28357279)
chr5 (185-243)||(15106864-15106922)
chr5 (418-463)||(7984107-7984152)
chr5 (418-470)||(7111022-7111074)
chr5 (418-461)||(2878715-2878758)
chr5 (204-243)||(31250207-31250246)
chr5 (204-243)||(38503253-38503292)
chr5 (204-243)||(43227926-43227965)
chr5 (418-460)||(26003002-26003044)
chr5 (327-393)||(27805987-27806053)
chr5 (418-460)||(29922228-29922270)
chr5 (418-468)||(36106778-36106828)
chr5 (418-463)||(1473358-1473403)
chr5 (417-470)||(22573648-22573701)
chr5 (420-461)||(33757092-33757133)
chr5 (418-469)||(589145-589197)
chr5 (420-468)||(2531323-2531371)
chr5 (420-468)||(15122542-15122590)
chr5 (420-468)||(15709932-15709980)
chr5 (424-468)||(16722024-16722068)
chr5 (423-463)||(17657244-17657284)
chr5 (184-239)||(930914-930969)
chr5 (327-394)||(13625468-13625535)
chr5 (184-239)||(15470597-15470652)
chr5 (184-243)||(34729531-34729590)
chr5 (418-461)||(40697005-40697048)
chr5 (418-460)||(12467269-12467311)
chr5 (418-468)||(12987053-12987103)
chr5 (418-468)||(13060641-13060691)
chr5 (424-470)||(17128273-17128319)
chr5 (327-385)||(24030294-24030352)
chr5 (418-468)||(25332277-25332327)
chr5 (418-460)||(41534628-41534670)
chr5 (204-242)||(42208977-42209015)
chr5 (204-241)||(5039742-5039779)
chr5 (417-470)||(11991300-11991353)
chr5 (204-241)||(15680897-15680934)
chr5 (420-461)||(33667433-33667474)
chr5 (428-460)||(10274279-10274311)
chr5 (418-470)||(15413987-15414039)
chr5 (207-243)||(17077421-17077457)
chr5 (420-468)||(17668397-17668445)
chr5 (327-371)||(17868152-17868196)
chr5 (353-385)||(19840106-19840138)
chr5 (418-470)||(22201975-22202027)
chr5 (421-468)||(35536945-35536990)
chr5 (326-382)||(41059736-41059792)
chr5 (435-463)||(42478939-42478967)
chr5 (418-470)||(42852017-42852069)
chr5 (418-470)||(43318998-43319050)
[»] chr1 (56 HSPs)
chr1 (327-393)||(36259239-36259305)
chr1 (418-470)||(41003382-41003434)
chr1 (423-470)||(35897667-35897714)
chr1 (327-385)||(50919567-50919625)
chr1 (204-241)||(15417813-15417850)
chr1 (420-468)||(17348877-17348925)
chr1 (417-461)||(51409745-51409789)
chr1 (420-459)||(8410155-8410194)
chr1 (418-469)||(15631900-15631951)
chr1 (204-243)||(24134620-24134659)
chr1 (184-243)||(25800309-25800368)
chr1 (418-461)||(36423020-36423063)
chr1 (327-385)||(10365250-10365308)
chr1 (327-385)||(10850014-10850072)
chr1 (327-393)||(22593355-22593421)
chr1 (204-242)||(25031493-25031531)
chr1 (205-243)||(34702310-34702348)
chr1 (418-470)||(391163-391216)
chr1 (201-238)||(8893925-8893962)
chr1 (418-463)||(10082252-10082297)
chr1 (420-461)||(32497312-32497353)
chr1 (204-241)||(50065072-50065109)
chr1 (418-470)||(4068110-4068162)
chr1 (420-468)||(5347152-5347200)
chr1 (420-468)||(13412493-13412541)
chr1 (420-468)||(15235201-15235249)
chr1 (417-461)||(22593445-22593489)
chr1 (326-394)||(26988219-26988287)
chr1 (187-243)||(35309784-35309840)
chr1 (326-394)||(51162340-51162408)
chr1 (204-243)||(3347699-3347738)
chr1 (204-239)||(12148569-12148604)
chr1 (204-243)||(14262717-14262756)
chr1 (204-243)||(19424106-19424145)
chr1 (204-243)||(29332344-29332383)
chr1 (327-394)||(37329360-37329427)
chr1 (204-243)||(49239843-49239882)
chr1 (204-243)||(49620032-49620071)
chr1 (195-238)||(49895800-49895843)
chr1 (204-238)||(10123049-10123083)
chr1 (204-242)||(40061504-40061542)
chr1 (184-245)||(2017661-2017721)
chr1 (420-461)||(5243444-5243485)
chr1 (205-242)||(7438682-7438719)
chr1 (418-470)||(9572823-9572876)
chr1 (420-461)||(15791388-15791429)
chr1 (420-461)||(17628465-17628506)
chr1 (420-461)||(20169268-20169309)
chr1 (185-238)||(30325020-30325073)
chr1 (184-233)||(39304199-39304248)
chr1 (418-470)||(10850110-10850162)
chr1 (426-458)||(13038954-13038986)
chr1 (429-461)||(31378801-31378833)
chr1 (418-458)||(39941377-39941417)
chr1 (327-367)||(46500948-46500988)
chr1 (327-367)||(47413470-47413510)
[»] chr7 (47 HSPs)
chr7 (417-470)||(12473201-12473254)
chr7 (418-470)||(34922926-34922978)
chr7 (327-394)||(29378716-29378783)
chr7 (418-469)||(41677370-41677421)
chr7 (420-462)||(21249159-21249201)
chr7 (184-240)||(22156160-22156216)
chr7 (184-240)||(22212075-22212131)
chr7 (417-461)||(42083455-42083499)
chr7 (184-243)||(37918740-37918799)
chr7 (204-243)||(40273881-40273920)
chr7 (204-243)||(48433706-48433745)
chr7 (195-243)||(3889787-3889835)
chr7 (204-240)||(4956088-4956124)
chr7 (420-468)||(16932970-16933018)
chr7 (420-468)||(16938353-16938401)
chr7 (326-394)||(29390498-29390566)
chr7 (420-468)||(35246669-35246717)
chr7 (418-470)||(38372553-38372605)
chr7 (418-470)||(44613512-44613564)
chr7 (417-468)||(9546422-9546473)
chr7 (204-239)||(12166146-12166181)
chr7 (204-243)||(20529956-20529995)
chr7 (418-461)||(22575590-22575633)
chr7 (204-243)||(23824588-23824627)
chr7 (204-243)||(31793528-31793567)
chr7 (204-243)||(38378279-38378318)
chr7 (204-239)||(43440753-43440788)
chr7 (418-461)||(47511047-47511090)
chr7 (204-238)||(25775609-25775643)
chr7 (205-243)||(33248799-33248837)
chr7 (204-242)||(37563247-37563285)
chr7 (420-461)||(1312118-1312159)
chr7 (420-468)||(2194084-2194133)
chr7 (204-245)||(5228128-5228169)
chr7 (428-461)||(17944531-17944564)
chr7 (204-245)||(20013639-20013680)
chr7 (423-468)||(22032759-22032804)
chr7 (420-461)||(24371447-24371488)
chr7 (424-461)||(28004588-28004625)
chr7 (418-470)||(7098139-7098191)
chr7 (420-468)||(14676000-14676048)
chr7 (424-468)||(14729970-14730014)
chr7 (420-468)||(16958813-16958861)
chr7 (333-385)||(18251478-18251530)
chr7 (420-468)||(23137203-23137251)
chr7 (204-240)||(24575213-24575249)
chr7 (420-460)||(44799409-44799448)
[»] chr8 (50 HSPs)
chr8 (420-468)||(38195484-38195532)
chr8 (417-470)||(19327862-19327915)
chr8 (418-470)||(13131425-13131477)
chr8 (420-468)||(42363357-42363405)
chr8 (204-243)||(5904370-5904409)
chr8 (418-461)||(32975691-32975734)
chr8 (184-238)||(8349459-8349513)
chr8 (419-461)||(16706140-16706182)
chr8 (327-385)||(24087251-24087309)
chr8 (420-461)||(35453414-35453455)
chr8 (420-461)||(38338891-38338932)
chr8 (420-461)||(42102111-42102152)
chr8 (207-243)||(3311500-3311536)
chr8 (420-460)||(11988202-11988242)
chr8 (204-239)||(1032634-1032669)
chr8 (418-461)||(2289925-2289968)
chr8 (204-243)||(4259919-4259958)
chr8 (420-459)||(12607086-12607125)
chr8 (204-243)||(19957317-19957356)
chr8 (327-394)||(25333649-25333716)
chr8 (327-394)||(25465795-25465862)
chr8 (418-461)||(28879062-28879105)
chr8 (418-461)||(32213061-32213104)
chr8 (204-243)||(36587646-36587685)
chr8 (204-239)||(38064041-38064076)
chr8 (204-243)||(41454823-41454862)
chr8 (418-460)||(1089018-1089060)
chr8 (184-241)||(8350498-8350556)
chr8 (204-238)||(11052580-11052614)
chr8 (418-460)||(13265489-13265531)
chr8 (418-460)||(24350558-24350600)
chr8 (418-460)||(31459051-31459093)
chr8 (327-393)||(31459119-31459185)
chr8 (327-385)||(34338331-34338389)
chr8 (327-385)||(36907592-36907650)
chr8 (204-238)||(38289231-38289265)
chr8 (204-238)||(43413882-43413916)
chr8 (204-241)||(8145835-8145872)
chr8 (327-384)||(24866899-24866956)
chr8 (420-461)||(29243104-29243145)
chr8 (327-384)||(30974070-30974127)
chr8 (184-221)||(37065493-37065530)
chr8 (418-454)||(402127-402163)
chr8 (420-460)||(3664141-3664181)
chr8 (326-362)||(13265594-13265630)
chr8 (330-382)||(14942507-14942559)
chr8 (418-470)||(16972396-16972448)
chr8 (327-367)||(25671838-25671878)
chr8 (418-470)||(32131435-32131487)
chr8 (420-468)||(42666995-42667043)
[»] chr2 (48 HSPs)
chr2 (420-468)||(446449-446497)
chr2 (420-468)||(32366147-32366195)
chr2 (184-239)||(33482618-33482673)
chr2 (327-393)||(23956212-23956278)
chr2 (420-460)||(22422209-22422249)
chr2 (418-470)||(34913429-34913481)
chr2 (204-243)||(3330197-3330236)
chr2 (423-470)||(27703502-27703549)
chr2 (204-243)||(34107554-34107593)
chr2 (204-243)||(42678320-42678359)
chr2 (327-385)||(8832537-8832595)
chr2 (184-233)||(25553122-25553171)
chr2 (202-243)||(29090475-29090516)
chr2 (420-461)||(40301356-40301397)
chr2 (426-470)||(7480949-7480993)
chr2 (418-470)||(21788452-21788504)
chr2 (326-394)||(29774816-29774884)
chr2 (418-470)||(33321442-33321494)
chr2 (327-394)||(887483-887550)
chr2 (417-468)||(1836997-1837048)
chr2 (418-461)||(8441477-8441520)
chr2 (429-460)||(26440096-26440127)
chr2 (204-243)||(33613601-33613640)
chr2 (418-461)||(42839359-42839402)
chr2 (327-385)||(1768775-1768833)
chr2 (208-242)||(1962887-1962921)
chr2 (205-239)||(5207156-5207190)
chr2 (327-393)||(5516148-5516214)
chr2 (205-243)||(5901828-5901866)
chr2 (418-460)||(12683645-12683687)
chr2 (204-242)||(18424148-18424186)
chr2 (420-470)||(27881038-27881088)
chr2 (327-393)||(29133615-29133681)
chr2 (418-460)||(29133706-29133748)
chr2 (420-461)||(10574202-10574243)
chr2 (420-461)||(17531953-17531994)
chr2 (204-241)||(20435843-20435880)
chr2 (435-468)||(21788570-21788603)
chr2 (187-240)||(37886204-37886257)
chr2 (205-245)||(6866566-6866606)
chr2 (420-468)||(19683571-19683619)
chr2 (424-468)||(22898401-22898445)
chr2 (418-470)||(25836751-25836803)
chr2 (429-461)||(27709718-27709750)
chr2 (208-243)||(32891341-32891377)
chr2 (418-470)||(33321351-33321403)
chr2 (326-394)||(35731207-35731275)
chr2 (203-243)||(43684338-43684378)
[»] chr6 (38 HSPs)
chr6 (326-385)||(9764338-9764397)
chr6 (417-470)||(30533975-30534028)
chr6 (417-461)||(10054385-10054429)
chr6 (418-466)||(21891377-21891425)
chr6 (204-243)||(6228256-6228295)
chr6 (204-243)||(18903363-18903402)
chr6 (204-243)||(20415558-20415597)
chr6 (421-468)||(32675829-32675875)
chr6 (204-242)||(17217019-17217057)
chr6 (418-468)||(23239244-23239294)
chr6 (435-468)||(2040121-2040154)
chr6 (326-383)||(10755230-10755287)
chr6 (420-468)||(1468173-1468221)
chr6 (418-470)||(2040225-2040277)
chr6 (420-460)||(22816626-22816666)
chr6 (423-463)||(32675933-32675973)
chr6 (418-461)||(2034268-2034311)
chr6 (204-243)||(4854302-4854341)
chr6 (204-243)||(7954918-7954957)
chr6 (206-245)||(18618538-18618576)
chr6 (204-243)||(24794891-24794930)
chr6 (204-242)||(5641686-5641724)
chr6 (424-466)||(9582501-9582543)
chr6 (429-463)||(17300788-17300822)
chr6 (327-393)||(25779897-25779963)
chr6 (418-468)||(34223564-34223614)
chr6 (204-241)||(3974503-3974540)
chr6 (420-469)||(4272378-4272427)
chr6 (435-468)||(6776921-6776954)
chr6 (420-461)||(10184370-10184411)
chr6 (423-460)||(28758365-28758402)
chr6 (424-461)||(32615459-32615496)
chr6 (418-470)||(6758622-6758674)
chr6 (327-367)||(10874082-10874122)
chr6 (204-240)||(11611432-11611468)
chr6 (327-367)||(12817056-12817096)
chr6 (327-367)||(20776452-20776492)
chr6 (418-470)||(29623516-29623568)
[»] chr3 (54 HSPs)
chr3 (418-468)||(24842146-24842196)
chr3 (326-367)||(10521252-10521293)
chr3 (204-245)||(50381772-50381813)
chr3 (420-468)||(4257342-4257390)
chr3 (327-378)||(27769736-27769787)
chr3 (204-243)||(29645823-29645862)
chr3 (327-394)||(42956127-42956194)
chr3 (204-243)||(47864696-47864735)
chr3 (204-242)||(11483674-11483712)
chr3 (420-470)||(21296761-21296811)
chr3 (185-239)||(33830345-33830399)
chr3 (326-380)||(36266316-36266370)
chr3 (204-245)||(985915-985956)
chr3 (326-367)||(10667496-10667537)
chr3 (418-470)||(22809232-22809285)
chr3 (418-463)||(24841426-24841471)
chr3 (204-245)||(38668186-38668227)
chr3 (330-394)||(22809144-22809208)
chr3 (424-468)||(28623279-28623323)
chr3 (418-470)||(40581116-40581168)
chr3 (418-470)||(53218079-53218131)
chr3 (421-468)||(3876203-3876249)
chr3 (204-243)||(9320955-9320994)
chr3 (327-394)||(20174888-20174955)
chr3 (204-243)||(27394567-27394606)
chr3 (204-243)||(27471564-27471603)
chr3 (204-243)||(27817064-27817103)
chr3 (204-243)||(29226386-29226425)
chr3 (421-460)||(30198998-30199037)
chr3 (184-235)||(32421416-32421467)
chr3 (204-239)||(33528201-33528236)
chr3 (204-243)||(39739334-39739373)
chr3 (327-394)||(48816786-48816853)
chr3 (204-243)||(49429520-49429559)
chr3 (184-243)||(50676843-50676902)
chr3 (418-460)||(5129854-5129896)
chr3 (418-468)||(10667395-10667445)
chr3 (327-385)||(17752079-17752137)
chr3 (327-385)||(19053399-19053457)
chr3 (418-460)||(41601370-41601412)
chr3 (424-458)||(42956224-42956258)
chr3 (418-468)||(51409390-51409440)
chr3 (418-455)||(3845865-3845902)
chr3 (418-463)||(7292682-7292727)
chr3 (204-241)||(31435497-31435534)
chr3 (429-470)||(33946592-33946633)
chr3 (423-460)||(36182508-36182545)
chr3 (206-243)||(45431687-45431724)
chr3 (185-238)||(48717478-48717531)
chr3 (204-240)||(1102692-1102728)
chr3 (418-470)||(11528886-11528938)
chr3 (420-460)||(24521246-24521286)
chr3 (418-470)||(32901187-32901239)
chr3 (210-242)||(37133912-37133944)
[»] scaffold0001 (1 HSPs)
scaffold0001 (204-243)||(419772-419811)
[»] scaffold0332 (2 HSPs)
scaffold0332 (327-393)||(14694-14760)
scaffold0332 (420-461)||(14787-14828)
[»] scaffold0157 (1 HSPs)
scaffold0157 (418-470)||(24740-24792)
[»] scaffold0006 (1 HSPs)
scaffold0006 (420-468)||(279032-279080)
[»] scaffold1367 (2 HSPs)
scaffold1367 (418-469)||(1054-1105)
scaffold1367 (435-468)||(1171-1204)
[»] scaffold0057 (2 HSPs)
scaffold0057 (326-381)||(24336-24391)
scaffold0057 (418-459)||(43855-43896)
[»] scaffold0012 (1 HSPs)
scaffold0012 (420-463)||(178502-178545)
[»] scaffold0048 (1 HSPs)
scaffold0048 (420-461)||(59272-59313)
[»] scaffold1088 (1 HSPs)
scaffold1088 (418-470)||(1289-1341)
[»] scaffold0100 (1 HSPs)
scaffold0100 (424-460)||(38497-38533)
[»] scaffold0004 (1 HSPs)
scaffold0004 (420-460)||(242680-242720)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 5e-70; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 247 - 600
Target Start/End: Original strand, 29996514 - 29996860
Alignment:
Q  247 tagtgagttgattttatgggtgcattcaaagagcttagtggatctgtttgaattggattattttttacttacnnnnnnntttatgcaaataaataagctt 346  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||   | ||        ||||| ||||||||||| ||    
T  29996514 tagtgagttgactttatgggtgcattcaaagagcttagtagatccgtttgaattggattattttta--taac--------ttatgtaaataaataagttt 29996603  T
Q  347 ttacgataatttataagtttttgttaacgaaaattgtatgtttataagnnnnnnnnnnnnnnn---cataaactacaaacttatgaataatatataaaaa 443  Q
    ||||| |||||||||||||||||||||| |||||||||| |||||||                   |||||| ||||||||||||||||||||||||||     
T  29996604 ttacgttaatttataagtttttgttaacaaaaattgtatctttataaatttttttttttctttttacataaattacaaacttatgaataatatataaaag 29996703  T
Q  444 cttatttatttgcataagttattttgcnnnnnnnnnnnnntaagtcaatccaaacaggctaataatattatatcaaacctacggtagagagtgcggcttc 543  Q
    ||||||||||||||||| || ||||||             |||||||| |||||||||||||||||||| ||||||||||||   |||||||||||||||    
T  29996704 cttatttatttgcataaattgttttgcaaaaactcaaaaataagtcaaaccaaacaggctaataatattgtatcaaacctaccacagagagtgcggcttc 29996803  T
Q  544 tacgattttagcaaggaaaatgataggttgacaagctttatgttgcacactcttcat 600  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29996804 tacgattttagcaaggaaaatgatatgttgacaagctttatgttgcacactcttcat 29996860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 29996370 - 29996525
Alignment:
Q  17 agtttttgtcattaattgatagtaatagtcacaagggcatatgtagtcaaataagacggtcaattattttgtatgttcaaccattttaattatgttacgg 116  Q
    |||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29996370 agtttttgtcattaattgata---atagtcacaagggcatatgtagtaaaataagacggtcaattattttgtatgttcaaccattttaattatgttacgg 29996466  T
Q  117 tatgatttattatttataatataatctagctggtccgagttttgaattagtgatttgac 175  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29996467 tatgatttattatttataatataatctagctggtccgggttttgaattagtgagttgac 29996525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 27368191 - 27368241
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  27368191 acaaacttatgaataatatataaaagcttatttatttgcataagttgtttt 27368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 9201696 - 9201648
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  9201696 aaacttataaataatacataaaaacttatttatttgcataagttatttt 9201648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 23297485 - 23297433
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  23297485 acaaacttatgaataatacataaaagcttatttatttgcataagctattttgc 23297433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 46283241 - 46283182
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| || ||| | |||||||||| |||||||||||||||||||||||||||||    
T  46283241 gtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggg 46283182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 48591372 - 48591439
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||||| ||||| ||||||| |  |||||||||||||||| || |||||    
T  48591372 ttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatcttcataag 48591439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 22525487 - 22525446
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  22525487 gagaaattcatcttaaaggtgaataagtggggtgtccgggat 22525446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 48591470 - 48591506
Alignment:
Q  425 tatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||||||||||||||||||||||||    
T  48591470 tatgaataatatataaaaacttatttatttgcataag 48591506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 11491215 - 11491254
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  11491215 gagaaattcaccttaaagatgaataagtggggtgtccggg 11491254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 40406956 - 40406995
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  40406956 gagaaattcaccttaaagatgaataagtggggtgtccggg 40406995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 8057127 - 8057177
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||||||||| |||||||||||||| ||||||| |||||||||    
T  8057127 acaagcttatgaataataaataaaaacttatttttttgcattagttatttt 8057177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 17329116 - 17329154
Alignment:
Q  201 ttggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  17329116 ttggagaaattcatcttaaagaggaataagtggggtgtc 17329154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 43084564 - 43084514
Alignment:
Q  186 caagtagtttaatgattggagaaattcatcttaaagatgaataagtggggt 236  Q
    ||||||||||||||  | |||||||||| ||||||||||||||||||||||    
T  43084564 caagtagtttaatggctagagaaattcaccttaaagatgaataagtggggt 43084514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 43362165 - 43362203
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  43362165 agaaattcaccttaaagatgaataagtggggtgtccggg 43362203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 43415328 - 43415378
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  43415328 acaaccttatgaataatacataaaaacttatttatttgcagaagttgtttt 43415378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 45847923 - 45847961
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  45847923 agaaattcaccttaaagatgaataagtggggtgtccggg 45847961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 43983356 - 43983397
Alignment:
Q  353 taatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  43983356 taatttataagattttattaacgaaaattgtatgtttataag 43983397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 212987 - 213038
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  212987 acaagcttatgaataataaataaaa-cttatttatttgcataagttgttttgc 213038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 948119 - 948067
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||| |||||||||||| |||||| ||||||||||| |||||| ||||||||    
T  948119 acaaagttatgaataatacataaaagcttatttattttcataagctattttgc 948067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 3564267 - 3564215
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||||||||||  |||||||||| |||||| | ||||||    
T  3564267 acaaacttatgaataatatataaaagtttatttattttcataagctgttttgc 3564215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 468
Target Start/End: Original strand, 4603376 - 4603420
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||    
T  4603376 ttataaataatacataaaaacttatttatttgcataagttgtttt 4603420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 8130535 - 8130483
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||  |||||| |||||||||||||||||| | ||||||    
T  8130535 acaaacttatgaataatgcataaaagcttatttatttgcataagctgttttgc 8130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 11256608 - 11256676
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||||||||||||||||||||||| | ||||| ||||||| | | |||| |||||||||| || |||||    
T  11256608 tttatgcaaataaataagcttttatgttaattcataagttctcgctaactaaaattgtatcttcataag 11256676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 12495685 - 12495737
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  12495685 acaagcttatgaataatacataaaagcttatttatttgcataagctgttttgc 12495737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 19298175 - 19298223
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||| ||||    
T  19298175 aaacttataaataatacataaaaatttatttatttgcataagttgtttt 19298223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 897109 - 897050
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||||||   |||||||||||||||   |||||||||| ||||    
T  897109 tttatgcaaataaataagcttttatattaatttataagttttcactaacgaaaatcgtat 897050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 7148819 - 7148776
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  7148819 acaagcttatgaataatacataaaagcttatttatttgcataag 7148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 7148910 - 7148843
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||| ||||||| |   ||| ||||||||||| ||||||||    
T  7148910 ttatgcaaataaataagcttttatgctaattcataagttctgactaaagaaaattgtatttttataag 7148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 16556550 - 16556511
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  16556550 gagaaattcaccttaaagatgaataagtggggtgttcggg 16556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 23297573 - 23297506
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||| ||||||| | | |||| |||||||||| || |||||    
T  23297573 ttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataag 23297506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 28074412 - 28074369
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  28074412 acaagcttatgaataatacataaaagcttatttatttgcataag 28074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 470
Target Start/End: Complemental strand, 29877681 - 29877634
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||||| |||||| ||||||||||||||||| || ||||||    
T  29877681 cttatgaataatacataaaagcttatttatttgcataaattgttttgc 29877634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 31022538 - 31022471
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||||||||||||||||| |||||  ||||| |||||||||   | ||||||||||||| ||||||||    
T  31022538 ttatgcaaataaataagcatttaccttaattcataagttttcactgacgaaaattgtatctttataag 31022471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 36740951 - 36740908
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||    
T  36740951 acaagcttatgcataatatataaaagcttatttatttgcataag 36740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 36993140 - 36993101
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  36993140 gagaaattcaccttaaagatgaataattggggtgtccggg 36993101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 460
Target Start/End: Original strand, 55638119 - 55638162
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||    
T  55638119 tacaaacttatgaataatacataaaagcttgtttatttgcataa 55638162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 461
Target Start/End: Complemental strand, 825724 - 825686
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  825724 cttatgaataatatagaaaagcttatttatttgcataag 825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 22096387 - 22096425
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  22096387 gagaaattcaccttaaaaatgaataagtggggtgtccgg 22096425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 25234835 - 25234889
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    ||||||||| || || || |||||||||| ||||||||||||||| |||||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtc 25234889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 29430615 - 29430557
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||| ||  | || ||||||| ||||||||||||||||| |||||||||||    
T  29430615 tcaagtagtttattggctagataaattcaccttaaagatgaataagtagggtgtccggg 29430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 44251326 - 44251364
Alignment:
Q  207 aaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  44251326 aaattcaccttaaagatgaataaatggggtgtccgggat 44251364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 48238177 - 48238227
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||| || |||||||| ||||||||||  ||||||||||||||    
T  48238177 aaacttatgaatgatttataaaaatttatttatttatataagttattttgc 48238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 48404134 - 48404172
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  48404134 agaaattcaccttaaagatgaataagtgaggtgtccggg 48404172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 3966775 - 3966734
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||| |||| ||||||| |||||||||||||||||    
T  3966775 aaacttatgaacaatacataaaaatttatttatttgcataag 3966734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 42611906 - 42611959
Alignment:
Q  418 acaaacttatgaataatatataaaaa-cttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  42611906 acaagcttatgaataatacatataaagcttatttatttgcataagttgttttgc 42611959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Original strand, 43740120 - 43740165
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttattttg 469  Q
    ||||||||||||| ||||||||||||||||| ||||| || |||||    
T  43740120 ttatgaataatatgtaaaaacttatttattttcataaattgttttg 43740165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Original strand, 46176023 - 46176060
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  46176023 ttataaataatacataaaaacttatttatttgcataag 46176060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 1374402 - 1374454
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||| ||  |||||||||| |||||||||||||||| ||||||    
T  1374402 acaagcttatgaatcatgcataaaaacttttttatttgcataagtttttttgc 1374454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 10098221 - 10098185
Alignment:
Q  208 aattcatctta-aagatgaataagtggggtgtccggg 243  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10098221 aattcatcttataagatgaataagtggggtgtccggg 10098185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 461
Target Start/End: Complemental strand, 19414165 - 19414133
Alignment:
Q  429 aataatatataaaaacttatttatttgcataag 461  Q
    ||||||| |||||||||||||||||||||||||    
T  19414165 aataatacataaaaacttatttatttgcataag 19414133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 22117399 - 22117351
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||||||  |||||||||||||||||| ||||    
T  22117399 aaacttataaataatacataaaaatgtatttatttgcataagttgtttt 22117351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Complemental strand, 22303137 - 22303101
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  22303137 ttataaataatacataaaaacttatttatttgcataa 22303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 30956783 - 30956830
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||||| | || |||||||||||||||||||||||| ||||||    
T  30956783 aaacttatgaatta-atgtaaaaacttatttatttgcataagctatttt 30956830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 454
Target Start/End: Complemental strand, 35010258 - 35010222
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttattt 454  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  35010258 acaaacttataaataatacataaaaacttatttattt 35010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 35909021 - 35909065
Alignment:
Q  201 ttggagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    ||||| ||||||| ||||||||| ||||||||||||||| |||||    
T  35909021 ttggaaaaattcaccttaaagataaataagtggggtgtctgggat 35909065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 49811404 - 49811436
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggt 236  Q
    |||||||||||||||||| ||||||||||||||    
T  49811404 gagaaattcatcttaaaggtgaataagtggggt 49811436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 28357279 - 28357221
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||    
T  28357279 ttatgcaaataaataagcttttatgttaatttataagttttcgttaacgaaaattgtat 28357221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 15106864 - 15106922
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||| || || |||||||| || ||||||||||||||||||||||||||||    
T  15106864 tcaagtagtttagtggttagagaaatttattttaaagatgaataagtggggtgtccggg 15106922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 7984152 - 7984107
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  7984152 acaaacttatgaataatacataaaaacttagttatttgcataagtt 7984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 7111022 - 7111074
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  7111022 acaatcttatgaataataaataagaacttatttatttgcataggttattttgc 7111074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 2878715 - 2878758
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  2878715 acaaacttatgaataatagataaaagcttatttatttgcataag 2878758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 31250246 - 31250207
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  31250246 gagaaattcaccttaaagatgaataagtggggtgtccggg 31250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 38503253 - 38503292
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  38503253 gagaaattcaccttaaagatgaataagtggggtgtccggg 38503292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 43227965 - 43227926
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  43227965 gagaaattcaccttaaagatgaataagtggggtgtccggg 43227926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 26003044 - 26003002
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  26003044 acaaacttataaataatacataaaaacttatttatttgcataa 26003002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 27806053 - 27805987
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    |||||||||||||||| |||||| | |||||||||||||||   |||| |||||||||| |||||||    
T  27806053 ttatgcaaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctttataa 27805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 29922228 - 29922270
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  29922228 acaagcttatgaataatacataaaaacttatttatttgcataa 29922270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 36106778 - 36106828
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||||||||||    
T  36106778 acaaatttatgaatcatacataaaaacttatttatttgcgtaagttatttt 36106828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 1473403 - 1473358
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||    
T  1473403 acaagcttatgaataatacataaaagcttatttatttgcataagtt 1473358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 22573701 - 22573648
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||| ||||||| | ||||||| ||||||||||||||||| ||||||    
T  22573701 tacaaacttataaataatacaaaaaaactcatttatttgcataagttgttttgc 22573648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 33757133 - 33757092
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  33757133 aaacttataaataatacataaaaacttatttatttgcataag 33757092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 589197 - 589145
Alignment:
Q  418 acaaacttatgaataa-tatataaaaacttatttatttgcataagttattttg 469  Q
    |||||||||||| ||| |||||||||||||||||||||||||||  |||||||    
T  589197 acaaacttatgagtaaatatataaaaacttatttatttgcataaactattttg 589145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 2531371 - 2531323
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||| |||||||||||||||||||||| ||||    
T  2531371 aaacttataaataatacataacaacttatttatttgcataagttgtttt 2531323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 15122590 - 15122542
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||||||||||||| |||||||||||| ||||    
T  15122590 aaacttataaataatacataaaaacttatttctttgcataagttgtttt 15122542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 15709932 - 15709980
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| | ||||||||||||||||||||||||| ||||    
T  15709932 aaacttataaataatacagaaaaacttatttatttgcataagttgtttt 15709980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 468
Target Start/End: Complemental strand, 16722068 - 16722024
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||| |||||||||||||||||||||||| |||||||    
T  16722068 ttataaataatacataaaaacttatttatttgcataaattatttt 16722024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 17657284 - 17657244
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  17657284 cttatgaataatacataaaagcttatttatttgcataagtt 17657244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 930914 - 930969
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    ||||||||||||| ||| | |||||||||| ||| |||||||||||||||| ||||    
T  930914 gtcaagtagtttagtgactagagaaattcacctttaagatgaataagtgggatgtc 930969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 13625468 - 13625535
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||||||||||||||| ||||||   |||||||||||||||   ||||||||||| ||| ||||||||    
T  13625468 ttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataag 13625535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 15470597 - 15470652
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    ||||||||||||| ||  | |||||||||| ||||||||||||||| |||||||||    
T  15470597 gtcaagtagtttagtggctagagaaattcaccttaaagatgaataaatggggtgtc 15470652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 34729590 - 34729531
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||| |  | || |||||||||| ||||||| |||||||||||||||||||||    
T  34729590 gtcaagtagttaagcggttagagaaattcaccttaaaggtgaataagtggggtgtccggg 34729531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 40697048 - 40697005
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||    
T  40697048 acaagcttataaataatacataaaaacttatttatttgcataag 40697005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 12467311 - 12467269
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| |||||| |||||||||||||||||    
T  12467311 acaagcttatgaataatacataaaagcttatttatttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 12987053 - 12987103
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| |||||||| |||| |||||| |||||||||||||||||||| ||||    
T  12987053 acaagcttatgaacaatacataaaagcttatttatttgcataagttctttt 12987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 13060641 - 13060691
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| |||||||| |||| |||||| |||||||||||||||||||| ||||    
T  13060641 acaagcttatgaacaatacataaaagcttatttatttgcataagttctttt 13060691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 17128319 - 17128273
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||| |||||| |||||||||||||||||| | ||||||    
T  17128319 ttatgaataatacataaaagcttatttatttgcataagctgttttgc 17128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 24030352 - 24030294
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||||| | ||||| ||||||| |   |||||||||||||||    
T  24030352 ttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtat 24030294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 25332277 - 25332327
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||| |||||||||| ||  |||||||||||||||||| ||||||    
T  25332277 acaaacttataaataatatattaatgcttatttatttgcataagctatttt 25332327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 41534670 - 41534628
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| |||||| |||||||||||||||||    
T  41534670 acaagcttatgaataatacataaaagcttatttatttgcataa 41534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 42209015 - 42208977
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  42209015 gagaaattcaccttaaagatgaataagtgaggtgtccgg 42208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 5039779 - 5039742
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||| | |||||||||||||||||||||||||||    
T  5039779 gagaaatttaccttaaagatgaataagtggggtgtccg 5039742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 11991353 - 11991300
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||| ||||| ||||||| |||||| ||||||||||| |||||||| ||||||    
T  11991353 tacaagcttataaataatacataaaagcttatttatttacataagttgttttgc 11991300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 15680897 - 15680934
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  15680897 gagaaattcaccttaaaggtgaataagtggggtgtccg 15680934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 33667433 - 33667474
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||| | ||||||| |||||||||||||||||||||||||    
T  33667433 aaacttgtaaataatacataaaaacttatttatttgcataag 33667474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 460
Target Start/End: Complemental strand, 10274311 - 10274279
Alignment:
Q  428 gaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||||| |||||||||||||||||    
T  10274311 gaataatatataaaatcttatttatttgcataa 10274279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 15414039 - 15413987
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||| ||||||| || || ||||||||||||||||||| | ||||||    
T  15414039 acaaacttatcaataatacattaatacttatttatttgcataagctgttttgc 15413987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 17077457 - 17077421
Alignment:
Q  207 aaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  17077457 aaattcacctttaagatgaataagtggggtgtccggg 17077421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 17668445 - 17668397
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||| || |||||||||||||||||| ||||    
T  17668445 aaacttataaataatacataaacacctatttatttgcataagttgtttt 17668397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 371
Target Start/End: Original strand, 17868152 - 17868196
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgtt 371  Q
    |||||||||||||||| |||||| | ||||| |||||||||||||    
T  17868152 ttatgcaaataaataaccttttatgttaattgataagtttttgtt 17868196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 353 - 385
Target Start/End: Complemental strand, 19840138 - 19840106
Alignment:
Q  353 taatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||| |||||||||||||||||    
T  19840138 taatttataagttttcgttaacgaaaattgtat 19840106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 22201975 - 22202027
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| ||||||||||| |||||| | ||||||    
T  22201975 acaagcttatgaataatacataaaagcttatttatttacataagctgttttgc 22202027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 468
Target Start/End: Original strand, 35536945 - 35536990
Alignment:
Q  421 aacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||||||||||  ||| |||||||||||||||||| ||||||    
T  35536945 aacttatgaataatata--aaagcttatttatttgcataagctatttt 35536990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 41059736 - 41059792
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattg 382  Q
    |||||||||||||||||||||||| | ||||| ||||||| |   ||||||||||||    
T  41059736 tttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattg 41059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 463
Target Start/End: Original strand, 42478939 - 42478967
Alignment:
Q  435 atataaaaacttatttatttgcataagtt 463  Q
    |||||||||||||||||||||||||||||    
T  42478939 atataaaaacttatttatttgcataagtt 42478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 42852069 - 42852017
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||| ||||| | ||||||    
T  42852069 acaagcttatgaataatacataaaagcttatttatttgaataagctgttttgc 42852017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 43319050 - 43318998
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||| ||||||| ||||| || |||||||||||||||||| ||||||    
T  43319050 acaagcttataaataatacataaagacatatttatttgcataagttgttttgc 43318998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 36259239 - 36259305
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    |||||||||||||||||||||||   |||||||||||| ||  ||||||||||||||||||||||||    
T  36259239 ttatgcaaataaataagcttttatattaatttataagtcttcattaacgaaaattgtatgtttataa 36259305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 41003434 - 41003382
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| ||||||    
T  41003434 acaaacttataaataatacataaaaacttatttatttgcataagtttttttgc 41003382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 35897667 - 35897714
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35897667 cttatgaataataaataaaaacttatttatttgcataagttgttttgc 35897714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 50919625 - 50919567
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||| | | |||||||| ||||||| ||||||||||||||||    
T  50919625 ttatgcaaataaataagctttcatgttaatttattagtttttattaacgaaaattgtat 50919567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 15417813 - 15417850
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15417813 gagaaattcatcttaaagatgaataagtggggtgtccg 15417850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 17348925 - 17348877
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  17348925 aaacttataaataatagataaaaacttatttatttgcataagttgtttt 17348877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 51409745 - 51409789
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  51409745 tacaaacttatgaataatacatacaaacttatttatttgcataag 51409789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 420 - 459
Target Start/End: Complemental strand, 8410194 - 8410155
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcata 459  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8410194 aaacttatgaataatacataaaaacttatttatttgcata 8410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 15631951 - 15631900
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttg 469  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||||| |||||    
T  15631951 acaaacttataaataatacataaaaacttatttatttgtataagttgttttg 15631900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 24134620 - 24134659
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24134620 gagaaattcaccttaaagatgaataagtggggtgtccggg 24134659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 25800309 - 25800368
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| |||||| ||  ||||||||| ||| |||||||||||||||||||||||||    
T  25800309 gtcaagtagcttaatggttaaagaaattcacctttaagatgaataagtggggtgtccggg 25800368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 36423020 - 36423063
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||||| |||||| ||||||||||||||||||    
T  36423020 acaaacttatgaataataaataaaagcttatttatttgcataag 36423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 10365308 - 10365250
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    |||||||||| |||||||||||| | ||||||| ||||||||  |||||||||||||||    
T  10365308 ttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtat 10365250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 10850014 - 10850072
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    |||| |||||||||||||||| | | |||||||||||||||  ||||||||||||||||    
T  10850014 ttatacaaataaataagctttcatgttaatttataagttttcattaacgaaaattgtat 10850072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 22593355 - 22593421
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||||||||| | ||||||||||||| |   |||| |||||||||| |||||||    
T  22593355 ttatgcaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatctttataa 22593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 25031493 - 25031531
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  25031493 gagaaattcaccttaaagatgaataagtggggtgtccgg 25031531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 34702310 - 34702348
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  34702310 agaaattcatcttaaagatgaataagtgaggtgtccggg 34702348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 391216 - 391163
Alignment:
Q  418 acaaacttatgaataatatataaaaa-cttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  391216 acaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgc 391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 8893962 - 8893925
Alignment:
Q  201 ttggagaaattcatcttaaagatgaataagtggggtgt 238  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8893962 ttggagaaattcaccttaaagatgaataagtggggtgt 8893925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 10082297 - 10082252
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||    
T  10082297 acaaacttatcaataacacataaaaacttatttatttgcataagtt 10082252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 32497312 - 32497353
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  32497312 aaacttataaataatacataaaaacttatttatttgcataag 32497353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 50065109 - 50065072
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| |||||||||||||||||||||||||||    
T  50065109 gagaaattcaccttaaagatgaataagtggggtgtccg 50065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 4068162 - 4068110
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||| ||| ||||||||    
T  4068162 acaagcttatgaataatacataaaagcttatttatttgcacaagctattttgc 4068110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 5347200 - 5347152
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||||||  |||||||||||||||||||||||    
T  5347200 aaacttataaataatacataaaaatgtatttatttgcataagttatttt 5347152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 13412493 - 13412541
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  13412493 aaacttataaataatacataaaaatttatgtatttgcataagttatttt 13412541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 15235201 - 15235249
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||||||||||||||||| |||||| ||||||    
T  15235201 aaacttataaataatacataaaaacttatttatttacataagctatttt 15235249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 22593445 - 22593489
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||    
T  22593445 tacaagcttatgaataatacataaaaatttatttatttgcataag 22593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 26988287 - 26988219
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||  |||||| |||||||| || |||||    
T  26988287 tttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttcataag 26988219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 35309840 - 35309784
Alignment:
Q  187 aagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||| || |  ||||||||| |||||||||||||||||||||||| ||||    
T  35309840 aagtagtttaacgactaaagaaattcaccttaaagatgaataagtggggtgttcggg 35309784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 51162408 - 51162340
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||| ||| |||||| | ||||||||||| | || |||||||||||||||| || |||||    
T  51162408 tttatgcaaataattaaacttttatgttaatttataagatcttattaacgaaaattgtatattcataag 51162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 3347699 - 3347738
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  3347699 gagaaattcaccttaaagatgaataagtggggtgtacggg 3347738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 12148569 - 12148604
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  12148569 gagaaattcaccttaaagatgaataagtggggtgtc 12148604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 14262717 - 14262756
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  14262717 gagaaattcaccttaaagatgaataagtagggtgtccggg 14262756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 19424145 - 19424106
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  19424145 gagaaattcaccttaaaggtgaataagtggggtgtccggg 19424106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 29332383 - 29332344
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  29332383 gagaaattcaccttaaaggtgaataagtggggtgtccggg 29332344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 37329360 - 37329427
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||||||||||| |    |||||||||||||| || |||||    
T  37329360 ttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataag 37329427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 49239843 - 49239882
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  49239843 gagaaatttaccttaaagatgaataagtggggtgtccggg 49239882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 49620071 - 49620032
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  49620071 gagaaattcactttaaagatgaataagtggggtgtccggg 49620032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 49895843 - 49895800
Alignment:
Q  195 taatgattggagaaattcatcttaaagatgaataagtggggtgt 238  Q
    ||||| || |||||||||||||||||| ||||||||||||||||    
T  49895843 taatggttagagaaattcatcttaaaggtgaataagtggggtgt 49895800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 10123049 - 10123083
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  10123049 gagaaattcaccttaaagatgaataagtggggtgt 10123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 40061542 - 40061504
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  40061542 gagaaatccaccttaaagatgaataagtggggtgtccgg 40061504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 2017661 - 2017721
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    ||||||||||||| ||  | |||||||||| |||||| ||||| ||||||||||||||||||    
T  2017661 gtcaagtagtttagtggctagagaaattcaccttaaa-atgaacaagtggggtgtccgggat 2017721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 5243444 - 5243485
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| | |||||||||||||||||||||||    
T  5243444 aaacttataaataatacacaaaaacttatttatttgcataag 5243485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 7438719 - 7438682
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  7438719 agaaattcacctttaagatgaataagtggggtgtccgg 7438682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 9572823 - 9572876
Alignment:
Q  418 acaaacttatgaataatatataaaaa-cttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| ||||||| |||||||||||||| ||| | ||||||    
T  9572823 acaaacttatgaataataaataaaaagcttatttatttgcaaaagctgttttgc 9572876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 15791429 - 15791388
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||| ||||||    
T  15791429 aaacttataaataatacataaaaacttatttatttacataag 15791388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 17628465 - 17628506
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| ||||||||||||||||||| |||||    
T  17628465 aaacttataaataatacataaaaacttatttatttgtataag 17628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 20169309 - 20169268
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  20169309 aaacttataaataatacataaaagcttatttatttgcataag 20169268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 30325020 - 30325073
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||||| ||  | |||||||||||||||||||||||||| | ||||||    
T  30325020 tcaagtagtttagtggctagagaaattcatcttaaagatgaataaatagggtgt 30325073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 39304199 - 39304248
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtgg 233  Q
    |||| |||||||| ||||  |||||||||||||||||||| |||||||||    
T  39304199 gtcatgtagtttagtgatcagagaaattcatcttaaagataaataagtgg 39304248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 10850110 - 10850162
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||| ||  ||||||||    
T  10850110 acaaccttatgaataatacataaaagcttatttatttgcaaaaactattttgc 10850162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 13038986 - 13038954
Alignment:
Q  426 atgaataatatataaaaacttatttatttgcat 458  Q
    ||||||||||||||||| |||||||||||||||    
T  13038986 atgaataatatataaaagcttatttatttgcat 13038954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 31378801 - 31378833
Alignment:
Q  429 aataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||| ||||||||||||||||||    
T  31378801 aataatatataaaagcttatttatttgcataag 31378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 458
Target Start/End: Complemental strand, 39941417 - 39941377
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcat 458  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  39941417 acaagcttatgaataatacataaaaactcatttatttgcat 39941377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 46500948 - 46500988
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    ||||||||||||||||||||||| | | |||||||||||||    
T  46500948 ttatgcaaataaataagcttttatgttgatttataagtttt 46500988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 47413510 - 47413470
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    ||||||||||||||||||||||| | |||||||||| ||||    
T  47413510 ttatgcaaataaataagcttttatgttaatttataattttt 47413470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 12473254 - 12473201
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  12473254 tacaaacttatgaataatacataaaaacttatttgtttgcataagttgttttgc 12473201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 34922978 - 34922926
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  34922978 acaaacttatgaataatacataaaagcttatttatttgcataagttgttttgc 34922926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 29378783 - 29378716
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||| || |||||    
T  29378783 ttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaattgtatcttcataag 29378716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 41677421 - 41677370
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttg 469  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  41677421 acaaacttatgaataatacataaaaatttatttatttgcataagttgttttg 41677370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 462
Target Start/End: Complemental strand, 21249201 - 21249159
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagt 462  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  21249201 aaacttatgaataatacataaaaacttatttatttgcataagt 21249159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 22156216 - 22156160
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    |||||||||| || || || ||||||||||||||| |||||||||||||||||||||    
T  22156216 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtcc 22156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 22212131 - 22212075
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    |||||||||| || || || ||||||||||||||| |||||||||||||||||||||    
T  22212131 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtcc 22212075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 461
Target Start/End: Original strand, 42083455 - 42083499
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  42083455 tacaaacttatgaataatacataaaaacttatttatttacataag 42083499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 37918799 - 37918740
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||||| || || |||||||||| || ||||||||||||||| ||||||||||    
T  37918799 gtcaagtagtttagtggttagagaaattcacctaaaagatgaataagtgaggtgtccggg 37918740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 40273920 - 40273881
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  40273920 gagaaattcaccttaaagatgaataagtggggtgtccggg 40273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 48433706 - 48433745
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  48433706 gagaaattcaccttaaagatgaataagtggggtgtccggg 48433745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 3889787 - 3889835
Alignment:
Q  195 taatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||| || |||||||||| ||| |||||||||||||||||||||||||    
T  3889787 taatggttagagaaattcacctttaagatgaataagtggggtgtccggg 3889835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 4956088 - 4956124
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    |||||||||| ||||||||||||||||||||||||||    
T  4956088 gagaaattcaccttaaagatgaataagtggggtgtcc 4956124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 16932970 - 16933018
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  16932970 aaacttataaataatacataaaaatttatttagttgcataagttatttt 16933018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 16938353 - 16938401
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| ||||||| ||||||||||||||||    
T  16938353 aaacttataaataatacataaaaatttatttagttgcataagttatttt 16938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 29390498 - 29390566
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||||||||||||||||||||||| | ||||| |||| || | | ||||||||||||||| || |||||    
T  29390498 tttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttcataag 29390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 35246717 - 35246669
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||| | ||||||| ||||||||||||||||||||||||||| ||||    
T  35246717 aaacttttaaataatacataaaaacttatttatttgcataagttgtttt 35246669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 38372605 - 38372553
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||| | |||||||||||||||||| | ||||||    
T  38372605 acaaacttatgaataatacataagagcttatttatttgcataagctgttttgc 38372553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 44613512 - 44613564
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  44613512 acaagcttatgaataataaataaaagcttatttatttgcataagctgttttgc 44613564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 9546422 - 9546473
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||| |||||||||||| ||||||  |||||||||||||||| |||||||    
T  9546422 tacaaatttatgaataatacataaaactttatttatttgcataaattatttt 9546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 12166181 - 12166146
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  12166181 gagaaattcaccttaaagatgaataagtggggtgtc 12166146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 20529995 - 20529956
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  20529995 gagaaattcaccttaaaggtgaataagtggggtgtccggg 20529956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 22575633 - 22575590
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||    
T  22575633 acaaacttataaataatacataaaaacgtatttatttgcataag 22575590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 23824588 - 23824627
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  23824588 gagaaattcaccttaaagatgaataagtagggtgtccggg 23824627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 31793567 - 31793528
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||| || |||||||||||||||||||||||||||||    
T  31793567 gagaaatccaccttaaagatgaataagtggggtgtccggg 31793528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 38378318 - 38378279
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  38378318 gagaaattcaccttaaaaatgaataagtggggtgtccggg 38378279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 43440788 - 43440753
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  43440788 gagaaattcaccttaaagatgaataagtggggtgtc 43440753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 47511090 - 47511047
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  47511090 acaagcttatgaataatacataaaagcttatttatttgcataag 47511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 25775609 - 25775643
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  25775609 gagaaattcaccttaaagatgaataagtggggtgt 25775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 33248799 - 33248837
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  33248799 agaaattcaccttaaagatgaataagtagggtgtccggg 33248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 37563247 - 37563285
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  37563247 gagaaattcatcttaaaaatgaataagtagggtgtccgg 37563285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 1312159 - 1312118
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| |||||||||||||||||||||||| || |||||    
T  1312159 aaacttataaataatatataaaaacttatttatctgtataag 1312118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 2194084 - 2194133
Alignment:
Q  420 aaacttatgaataa-tatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||| || ||||||||||| ||||||||||||||||||||    
T  2194084 aaacttataaataagtacataaaaacttaattatttgcataagttatttt 2194133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 5228169 - 5228128
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||| ||||||| |||||||||||||||||| ||||    
T  5228169 gagaaattcaccttaaaggtgaataagtggggtgtccaggat 5228128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 461
Target Start/End: Complemental strand, 17944564 - 17944531
Alignment:
Q  428 gaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||| ||||||||||||||||||    
T  17944564 gaataatatataaaagcttatttatttgcataag 17944531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 20013680 - 20013639
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||||||||||| || ||||||||| ||||||||||    
T  20013680 gagaaattcatcttaaaggtggataagtgggatgtccgggat 20013639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Complemental strand, 22032804 - 22032759
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||| ||||||| |||||||| |||||||||||||||||| ||||    
T  22032804 cttataaataatacataaaaacatatttatttgcataagttgtttt 22032759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 24371447 - 24371488
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| || ||||||||||||||||||||||    
T  24371447 aaacttataaataatacattaaaacttatttatttgcataag 24371488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 28004625 - 28004588
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  28004625 ttataaataatacataaaaacttatttatttgcataag 28004588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 7098139 - 7098191
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||  |||||| |||||||||||| ||||  ||||||||    
T  7098139 acaaacttatgaataattcataaaatcttatttatttgtataaactattttgc 7098191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 14676000 - 14676048
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||| || |||||||||||||||||| ||||    
T  14676000 aaacttataaataatacataaacacctatttatttgcataagttgtttt 14676048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 468
Target Start/End: Complemental strand, 14730014 - 14729970
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||||| |||||| |||||||||||| ||||||| ||||    
T  14730014 ttatgaataataaataaaatcttatttatttggataagttgtttt 14729970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 16958861 - 16958813
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| ||||||| ||||||||||| ||||    
T  16958861 aaacttataaataatacataaaaatttatttagttgcataagttgtttt 16958813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 18251478 - 18251530
Alignment:
Q  333 aaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||  ||||| | ||||||||||| ||||| |||||||||||||||    
T  18251478 aaataaataaatttttatgttaatttataagattttgctaacgaaaattgtat 18251530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 23137203 - 23137251
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| |||||| |||| ||||||||||||    
T  23137203 aaacttataaataatacataaaaatttatttgtttgtataagttatttt 23137251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 24575249 - 24575213
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  24575249 gagaaattcatcttaaaggtgaataagtagggtgtcc 24575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 44799448 - 44799409
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  44799448 aaacttataaataata-ataaaaacttatttatttgcataa 44799409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 38195532 - 38195484
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  38195532 aaacttataaataatatataaaaacttatttatttgcataagttgtttt 38195484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 19327915 - 19327862
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  19327915 tacaaacttatgaataatacataaaagtttatttatttgcataagttgttttgc 19327862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 13131477 - 13131425
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||||| ||||||||||||||||| || ||||||    
T  13131477 acaaacttatgaataatacataaaagcttatttatttgcataatttgttttgc 13131425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 42363357 - 42363405
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  42363357 aaacttataaataatacataaaaacttatttatttgcataagctatttt 42363405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 5904370 - 5904409
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  5904370 gagaaattcatcttaaagatgaataagtgggatgtccggg 5904409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 32975734 - 32975691
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  32975734 acaagcttatgaataatatataaaagcttatttatttgcataag 32975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 8349459 - 8349513
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| || || || || ||||||||||||||||||||||||||||||||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggtgt 8349513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 461
Target Start/End: Original strand, 16706140 - 16706182
Alignment:
Q  419 caaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||||| |||||||| ||||||||||||||||    
T  16706140 caaacttatgaataatacataaaaacatatttatttgcataag 16706182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 24087309 - 24087251
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    |||||||||||||||||||||||   |||||||||||||||  ||||||||||| ||||    
T  24087309 ttatgcaaataaataagcttttattttaatttataagttttcattaacgaaaatggtat 24087251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 35453455 - 35453414
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  35453455 aaacttatgaataatacataaaagcttatttatttgcataag 35453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 38338891 - 38338932
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  38338891 aaacttataaataatatttaaaaacttatttatttgcataag 38338932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 42102152 - 42102111
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  42102152 aaacttataaataatacataaaaacttatttatttgcataag 42102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 3311536 - 3311500
Alignment:
Q  207 aaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||| |||||||||||||||||||||||||    
T  3311536 aaattcatctttaagatgaataagtggggtgtccggg 3311500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 11988242 - 11988202
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||| ||||||| ||||||||||||||||||||||||    
T  11988242 aaacttataaataatacataaaaacttatttatttgcataa 11988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 1032669 - 1032634
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  1032669 gagaaattcaccttaaagatgaataagtggggtgtc 1032634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 2289925 - 2289968
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| |||||| |||||| |||||||||||||||||||||||||    
T  2289925 acaagcttatggataataaataaaaacttatttatttgcataag 2289968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 4259958 - 4259919
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  4259958 gagaaattcaccttaaagatgaataagtggggagtccggg 4259919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 459
Target Start/End: Complemental strand, 12607125 - 12607086
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcata 459  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  12607125 aaacttataaataatacataaaaacttatttatttgcata 12607086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 19957317 - 19957356
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  19957317 gagaaattcaccttaaaggtgaataagtggggtgtccggg 19957356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 25333649 - 25333716
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||| ||||||||||||||||| | ||||| |||||||||   ||||||||||||||| || |||||    
T  25333649 ttatgtaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatcttcataag 25333716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 25465795 - 25465862
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||| |||||||||   |||| |||||||||| || |||||    
T  25465795 ttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataag 25465862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 28879105 - 28879062
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  28879105 acaagcttatgaataatacataaaagcttatttatttgcataag 28879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 32213061 - 32213104
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||    
T  32213061 acaagcttatgaataatacataaaagcttatttatttgcataag 32213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 36587646 - 36587685
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  36587646 gagaaattcatcttaaagataaataagtggggtgttcggg 36587685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 38064076 - 38064041
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  38064076 gagaaattcaccttaaagatgaataagtggggtgtc 38064041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 41454823 - 41454862
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  41454823 gagaaattcacattaaagatgaataagtggggtgtccggg 41454862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 1089060 - 1089018
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  1089060 acaagcttatgaataatacattaaaacttatttatttgcataa 1089018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 8350556 - 8350498
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaa-gatgaataagtggggtgtccg 241  Q
    |||||||||| || || || || |||||||||||||| |||||||||||||||||||||    
T  8350556 gtcaagtagtctagtggttagataaattcatcttaaaagatgaataagtggggtgtccg 8350498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 11052580 - 11052614
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  11052580 gagaaattcaccttaaagatgaataagtggggtgt 11052614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 13265531 - 13265489
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| |||||| |||||||||||||||||    
T  13265531 acaagcttatgaataatacataaaagcttatttatttgcataa 13265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 24350558 - 24350600
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| |||||||||||||||||||| |||| ||||||||||||    
T  24350558 acaagcttatgaataatatataaaagcttaattatttgcataa 24350600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Complemental strand, 31459093 - 31459051
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||||| ||||||||||||||| |||||||||| |||||    
T  31459093 acaaacttataaataatatataaaaatttatttatttacataa 31459051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 31459185 - 31459119
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||| ||||| |||||||||||| ||||  ||||  |||||||| | |||||||    
T  31459185 ttatgcaaataaataagtttttatgataatttataaattttaattaataaaaattgtttctttataa 31459119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 34338331 - 34338389
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||| ||||||||||||| | |||| ||||||||||   |||||||||||||||    
T  34338331 ttatgcaaaaaaataagcttttatgttaatctataagttttaactaacgaaaattgtat 34338389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 36907592 - 36907650
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||||| | ||||| ||||| | ||  |||||||||||||||    
T  36907592 ttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtat 36907650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 38289231 - 38289265
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  38289231 gagaaattcaccttaaagatgaataagtggggtgt 38289265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 43413882 - 43413916
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgt 238  Q
    |||||||||| ||||||||||||||||||||||||    
T  43413882 gagaaattcaccttaaagatgaataagtggggtgt 43413916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 8145872 - 8145835
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  8145872 gagaaattcaccttaaaggtgaataagtggggtgtccg 8145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 24866899 - 24866956
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgta 384  Q
    ||||||||||||||||| |||||   ||||||||||||| | | ||||||||||||||    
T  24866899 ttatgcaaataaataagtttttatcttaatttataagttctcgataacgaaaattgta 24866956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 29243104 - 29243145
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  29243104 aaacttataaataatacataaaagcttatttatttgcataag 29243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 30974127 - 30974070
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgta 384  Q
    ||||||||||||||||||||||| | ||||| ||||| | ||  ||||||||||||||    
T  30974127 ttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgta 30974070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 37065530 - 37065493
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaag 221  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  37065530 gtcaagtagtttaatgattagagaaattcaccttaaag 37065493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 454
Target Start/End: Original strand, 402127 - 402163
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttattt 454  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  402127 acaaacttataaataatacataaaaacttatttattt 402163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 460
Target Start/End: Complemental strand, 3664181 - 3664141
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||| ||||||| ||||||| ||||||||||||||||    
T  3664181 aaacttataaataatacataaaaatttatttatttgcataa 3664141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 13265630 - 13265594
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataa 362  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  13265630 tttatgcaaataaataagtttttacgttaatttataa 13265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 14942559 - 14942507
Alignment:
Q  330 tgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattg 382  Q
    |||||||||||||| ||||| | ||||||||||||| ||| |||| |||||||    
T  14942559 tgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattg 14942507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 16972396 - 16972448
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| ||| || |||||||||||||| || || ||||||    
T  16972396 acaaacttatgaataatacatacaagcttatttatttgcaaaaattgttttgc 16972448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 25671838 - 25671878
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    ||||| ||||||||||||||||| | |||||||||||||||    
T  25671838 ttatgtaaataaataagcttttatgttaatttataagtttt 25671878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 32131487 - 32131435
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||| |||||||  |||||| |||||||||||||||||| | ||||||    
T  32131487 acaaacttaggaataatgcataaaagcttatttatttgcataagctgttttgc 32131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 42667043 - 42666995
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| |||| ||||| |||||||||||||||| ||||    
T  42667043 aaacttataaataatacataacaacttgtttatttgcataagttgtttt 42666995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 446497 - 446449
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  446497 aaacttataaataatatataaaaacttatttatttgcataagttgtttt 446449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 32366195 - 32366147
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  32366195 aaacttataaataatacataaaaacttatttatttgcataagttatttt 32366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 33482618 - 33482673
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| | ||| || ||||||||||||||||||||||||||||||||||||    
T  33482618 gtcaagtagtctgatggttagagaaattcatcttaaagatgaataagtggggtgtc 33482673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 23956212 - 23956278
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||| ||||| | ||||||||||||| |  |||||||||||||||| |||||||    
T  23956212 ttatgcaaataaataagtttttatgttaatttataagttctcattaacgaaaattgtatctttataa 23956278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 22422209 - 22422249
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  22422209 aaacttataaataatatataaaaacttatttatttgcataa 22422249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 34913429 - 34913481
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  34913429 acaaacttatgaataatacataaaagcttatttatttgcataagctgttttgc 34913481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 3330197 - 3330236
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  3330197 gagaaattcaccttaaagatgaataagtggggtgtccggg 3330236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 470
Target Start/End: Original strand, 27703502 - 27703549
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||    
T  27703502 cttatgaataatatataaaagcttatttatttgcataagctgttttgc 27703549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 34107593 - 34107554
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  34107593 gagaaattcaccttaaagatgaataagtggggtgtccggg 34107554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 42678320 - 42678359
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  42678320 gagaaattcaccttaaagatgaataagtggggtgtccggg 42678359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 385
Target Start/End: Complemental strand, 8832595 - 8832537
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||||||||| | ||||| |||||||||   |||||||||||||||    
T  8832595 ttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtat 8832537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 25553122 - 25553171
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtgg 233  Q
    |||||||| |||| || || ||||||||||||||||||||||||||||||    
T  25553122 gtcaagtaatttagtggttagagaaattcatcttaaagatgaataagtgg 25553171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 29090516 - 29090475
Alignment:
Q  202 tggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  29090516 tggagaaattcaccttaaagatgaataagtgaggtgtccggg 29090475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 40301397 - 40301356
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||||||||||    
T  40301397 aaacttataaataatacataaaaacttatttatttgcataag 40301356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 7480949 - 7480993
Alignment:
Q  426 atgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||    
T  7480949 atgaataatatataaaatattatttatttgcataagttgttttgc 7480993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 21788504 - 21788452
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  21788504 acaagcttatgaataataaataaaagcttatttatttgcataagatgttttgc 21788452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 29774884 - 29774816
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||| ||||||||||||||||||||| ||||| ||||||| |   ||||||||||||||| || |||||    
T  29774884 tttaagcaaataaataagcttttacgttaattcataagttctcactaacgaaaattgtattttcataag 29774816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 33321442 - 33321494
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||    
T  33321442 acaagcttatgagtaatacataaaaacttaattatttgcataagttgttttgc 33321494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 887550 - 887483
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||| ||||||||||| | ||||| ||||||| ||| ||| ||||||||||| || |||||    
T  887550 ttatgcaaatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatcttcataag 887483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Complemental strand, 1837048 - 1836997
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||| ||||||||||||| |||| |||||||||||||| |||| ||||||    
T  1837048 tacaaatttatgaataatatgtaaatacttatttatttgcttaagctatttt 1836997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Complemental strand, 8441520 - 8441477
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||    
T  8441520 acaaacttataaataatacataaaaacatatttatttgcataag 8441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 460
Target Start/End: Complemental strand, 26440127 - 26440096
Alignment:
Q  429 aataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||||||||||||||||||||||    
T  26440127 aataatatataaaaacttatttatttgcataa 26440096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 33613601 - 33613640
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  33613601 gagaaattcaacttaaaggtgaataagtggggtgtccggg 33613640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 42839359 - 42839402
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||||| |||||||||||||||| | ||||||    
T  42839359 acaaacttatgaataatacataaaaacttatttatctacataag 42839402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 1768775 - 1768833
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||||||||||||||| ||||| | ||||||||||||| |   |||||||||||||||    
T  1768775 ttatgcaaataaataagtttttaggttaatttataagttctgagtaacgaaaattgtat 1768833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 1962921 - 1962887
Alignment:
Q  208 aattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||| ||||||||||||||||||||||||||||    
T  1962921 aattcaccttaaagatgaataagtggggtgtccgg 1962887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 5207190 - 5207156
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtc 239  Q
    ||||||||||||||||| |||||||||||||||||    
T  5207190 agaaattcatcttaaaggtgaataagtggggtgtc 5207156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 5516214 - 5516148
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||||||||  | ||||||||||| | |   ||||||||||||||| |||||||    
T  5516214 ttatgcaaataaataagcttttgtgttaatttataagctctcactaacgaaaattgtatttttataa 5516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 5901828 - 5901866
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  5901828 agaaattcacctttaagatgaataagtggggtgtccggg 5901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 12683645 - 12683687
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  12683645 acaagcttatgaataatacattaaaacttatttatttgcataa 12683687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 18424148 - 18424186
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  18424148 gagaaattcaccttaaagatgaataagtgggatgtccgg 18424186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 470
Target Start/End: Original strand, 27881038 - 27881088
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||| ||||||| |||| ||| |||||||||||||||| ||||||||    
T  27881038 aaacttataaataatacataataacatatttatttgcataagctattttgc 27881088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 29133615 - 29133681
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||  ||||  |  ||||||||||||||  |||||||||||||||| |||||||    
T  29133615 ttatgcaaataaataaatttttgtgtcaatttataagttttcattaacgaaaattgtatctttataa 29133681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 29133706 - 29133748
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||||||||||||||| ||||||  ||||||||||||||||    
T  29133706 acaaacttatgaataatacataaaagattatttatttgcataa 29133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 10574202 - 10574243
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||| ||||||||||||    
T  10574202 aaacttataaataatagataaaaacttatgtatttgcataag 10574243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 17531994 - 17531953
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||  |||||| |||||||||||||||||||||||||    
T  17531994 aaacttatagataatacataaaaacttatttatttgcataag 17531953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 20435880 - 20435843
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  20435880 gagaaattcaccttaaagatgaataagtgggatgtccg 20435843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Original strand, 21788570 - 21788603
Alignment:
Q  435 atataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| |||||||||||||||||||||||||    
T  21788570 atataaaagcttatttatttgcataagttatttt 21788603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 37886204 - 37886257
Alignment:
Q  187 aagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    ||||||| ||| | || |||||||||| ||||||| ||||||||||||||||||    
T  37886204 aagtagtctaacggttagagaaattcaccttaaaggtgaataagtggggtgtcc 37886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 6866606 - 6866566
Alignment:
Q  205 agaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    ||||||||| ||||||||| |||||||| ||||||||||||    
T  6866606 agaaattcaccttaaagataaataagtgaggtgtccgggat 6866566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 19683619 - 19683571
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||  |||||| ||||||||| |||||||| |||||||||||||    
T  19683619 aaacttatatataatacataaaaactcatttatttacataagttatttt 19683571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 468
Target Start/End: Original strand, 22898401 - 22898445
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||| |||||||  |||||||||||||||||||||||    
T  22898401 ttataaataatacataaaaatgtatttatttgcataagttatttt 22898445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 25836751 - 25836803
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| | |||||||||||||||| | ||||||    
T  25836751 acaagcttatgaataatacataaaagcatatttatttgcataagctgttttgc 25836803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 429 - 461
Target Start/End: Original strand, 27709718 - 27709750
Alignment:
Q  429 aataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||| ||||||||||||||||||    
T  27709718 aataatatataaaagcttatttatttgcataag 27709750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 32891377 - 32891341
Alignment:
Q  208 aattcatctta-aagatgaataagtggggtgtccggg 243  Q
    ||||||||||| |||||||||||||||||||||||||    
T  32891377 aattcatcttataagatgaataagtggggtgtccggg 32891341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 33321351 - 33321403
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||| | |||||| |||||||||||||| ||||| ||||||    
T  33321351 acaagcttatgaataagacataaaagcttatttatttgcacaagttgttttgc 33321403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 35731275 - 35731207
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||| |||||||||||| ||||||| ||||| ||||| |||  |||| ||||||| ||| ||||||||    
T  35731275 tttatacaaataaataagattttacgttaattcataagatttcattaatgaaaattttatttttataag 35731207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 43684378 - 43684338
Alignment:
Q  203 ggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  43684378 ggagaaattcaccttaaaggtgaataagtggggtgttcggg 43684338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 9764338 - 9764397
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    |||||||||||||||||||||||| | |||||||||||| ||  ||||||||||||||||    
T  9764338 tttatgcaaataaataagcttttatgttaatttataagtgttcattaacgaaaattgtat 9764397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 417 - 470
Target Start/End: Complemental strand, 30534028 - 30533975
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  30534028 tacaaacttatgaataatacataaaagcttatttatttgcataagctgttttgc 30533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 461
Target Start/End: Complemental strand, 10054429 - 10054385
Alignment:
Q  417 tacaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  10054429 tacaaacttatgaataatacataaaagcttatttatttgcataag 10054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 21891377 - 21891425
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatt 466  Q
    |||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  21891377 acaagcttatgaataatatatcaaaacttatttatttgcataagctatt 21891425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 6228256 - 6228295
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  6228256 gagaaattcaccttaaagatgaataagtggggtgtccggg 6228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 18903363 - 18903402
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  18903363 gagaaattcaccttaaagatgaataagtggggtgtccggg 18903402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 20415558 - 20415597
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20415558 gagaaattcaccttaaagatgaataagtggggtgtccggg 20415597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 421 - 468
Target Start/End: Complemental strand, 32675875 - 32675829
Alignment:
Q  421 aacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  32675875 aacttatgaatta-atataaaaacttatttatttgcataagttatttt 32675829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 17217057 - 17217019
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  17217057 gagaaattcaccttaaagatgaataagtggggtgtccgg 17217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 23239294 - 23239244
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||||||||| |||||| |||||||||||| ||||||||||||    
T  23239294 acaagcttatgaataataaataaaagcttatttatttgtataagttatttt 23239244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 468
Target Start/End: Complemental strand, 2040154 - 2040121
Alignment:
Q  435 atataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||||||||||||||||||||||||||||    
T  2040154 atataaaaacttatttatttgcataagttatttt 2040121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 10755230 - 10755287
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgt 383  Q
    |||||||||||||||||||||||| | ||||| ||||||| ||  |||||||||||||    
T  10755230 tttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaattgt 10755287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Complemental strand, 1468221 - 1468173
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||| ||||||| ||||||||||||||||||||||||| ||||||    
T  1468221 aaacctataaataatacataaaaacttatttatttgcataagctatttt 1468173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 2040225 - 2040277
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||||||||||| |||||| |||||||||||  ||||||| ||||||    
T  2040225 acaaacttatgaataataaataaaagcttatttatttatataagttgttttgc 2040277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 22816626 - 22816666
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  22816626 aaacttatgaatattacataaaaacttatttatttgcataa 22816666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 32675933 - 32675973
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  32675933 cttatgaataataaataaaagcttatttatttgcataagtt 32675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 2034268 - 2034311
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||    
T  2034268 acaaacttataaataatacataaaagcttatttatttgcataag 2034311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 4854302 - 4854341
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  4854302 gagaaatttaccttaaagatgaataagtggggtgtccggg 4854341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 7954918 - 7954957
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  7954918 gagaaattcatcttaaagatgaataagtgggatgttcggg 7954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 245
Target Start/End: Original strand, 18618538 - 18618576
Alignment:
Q  206 gaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18618538 gaaattca-cttaaagatgaataagtggggtgtccgggat 18618576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 24794891 - 24794930
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  24794891 gagaaattcatcttaaatatgaataagtgggatgtccggg 24794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 5641686 - 5641724
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  5641686 gagaaattcaccttaaaggtgaataagtggggtgtccgg 5641724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9582501 - 9582543
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatt 466  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||    
T  9582501 ttataaataatacataaaaatttatttatttgcataagttatt 9582543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 463
Target Start/End: Original strand, 17300788 - 17300822
Alignment:
Q  429 aataatatataaaaacttatttatttgcataagtt 463  Q
    ||||||| |||||||||||||||||||||||||||    
T  17300788 aataatacataaaaacttatttatttgcataagtt 17300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 25779963 - 25779897
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    |||||||||||||| | |||||| | | |||||||| ||||| |||| ||||||||||| |||||||    
T  25779963 ttatgcaaataaattaacttttatgtttatttataaatttttattaaagaaaattgtatatttataa 25779897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 34223564 - 34223614
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||| ||||| | |||||||||||||||||| |||||||| ||||    
T  34223564 acaaacttataaataacacataaaaacttatttattttcataagttgtttt 34223614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 3974540 - 3974503
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  3974540 gagaaattcaccttaaagatgaataagtggggagtccg 3974503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Complemental strand, 4272427 - 4272378
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttattttg 469  Q
    ||||||||| |||||| ||||||| |||||||||||||||| || |||||    
T  4272427 aaacttatgtataatacataaaaagttatttatttgcataaattgttttg 4272378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Original strand, 6776921 - 6776954
Alignment:
Q  435 atataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||||||||||||||||||||| ||||||    
T  6776921 atataaaaacttatttatttgcataagctatttt 6776954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 10184370 - 10184411
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| ||||||| |||||||||||||||||| ||||||    
T  10184370 aaacttataaataatagataaaaacttatttatttacataag 10184411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Original strand, 28758365 - 28758402
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  28758365 cttatgaataatacataaaaatttatttatttgcataa 28758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 461
Target Start/End: Original strand, 32615459 - 32615496
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  32615459 ttataaataatacataaaaacttatttatttgcataag 32615496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 6758674 - 6758622
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| |||||| |||||| | |||| |||||||||||||||||||| ||||||    
T  6758674 acaagcttatggataataaacaaaagcttatttatttgcataagttgttttgc 6758622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 10874122 - 10874082
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    ||||||||||||||||||||||| | ||||| |||||||||    
T  10874122 ttatgcaaataaataagcttttatgttaattcataagtttt 10874082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 11611468 - 11611432
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    ||||||||||  |||||||||||||||||||||||||    
T  11611468 gagaaattcacattaaagatgaataagtggggtgtcc 11611432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 12817056 - 12817096
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    ||||||||||||||||||||||| | ||||||||| |||||    
T  12817056 ttatgcaaataaataagcttttatgttaatttatatgtttt 12817096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 367
Target Start/End: Complemental strand, 20776492 - 20776452
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  20776492 ttatgcaaataaataaacttttatgataatttagaagtttt 20776452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 29623516 - 29623568
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||| || ||||||| ||||||  ||||||||||||||||||| ||||||    
T  29623516 acaaactcataaataataaataaaaggttatttatttgcataagttgttttgc 29623568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 24842146 - 24842196
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  24842146 acaaacttatgaataatacataaaaatttatttatttgcataagttgtttt 24842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 10521293 - 10521252
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  10521293 tttatgcaaataaacaagcttttacgataatttataagtttt 10521252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 50381813 - 50381772
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  50381813 gagaaattcaccttaaagatgaataagtggggtgtccgggat 50381772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 4257342 - 4257390
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  4257342 aaacttataaataatacataaaaacttatttatttgcataagttgtttt 4257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 27769787 - 27769736
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaa 378  Q
    ||||||||||||||||||||||| | |||||||||||||||  |||||||||    
T  27769787 ttatgcaaataaataagcttttatgttaatttataagttttcattaacgaaa 27769736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 29645823 - 29645862
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29645823 gagaaattcaccttaaagatgaataagtggggtgtccggg 29645862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 42956127 - 42956194
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||| ||||| | ||||||||||||| |   ||||||||||||||| ||||||||    
T  42956127 ttatgcaaataaataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataag 42956194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 47864735 - 47864696
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  47864735 gagaaattcaccttaaagatgaataagtggggtgtccggg 47864696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 11483712 - 11483674
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11483712 gagaaattcaccttaaagatgaataagtggggtgtccgg 11483674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 470
Target Start/End: Complemental strand, 21296811 - 21296761
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||| |||||||||||||||||||||||| || ||||||    
T  21296811 aaacgtatgaataatagataaaaacttatttatttgcataaattgttttgc 21296761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 33830345 - 33830399
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||||| || || |||||||||| |||||| ||||||||||||||||||    
T  33830345 tcaagtagtttattggttagagaaattcaccttaaaaatgaataagtggggtgtc 33830399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 36266370 - 36266316
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaat 380  Q
    |||||||||||||||||| |||||   |||||||||||||||| |||||||||||    
T  36266370 tttatgcaaataaataagtttttattttaatttataagtttttattaacgaaaat 36266316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 985915 - 985956
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  985915 gagaaattcacctttaagatgaataagtggggtgtccgggat 985956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 10667537 - 10667496
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttt 367  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  10667537 tttatgcaaataaacaagcttttacgataatatataagtttt 10667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 22809232 - 22809285
Alignment:
Q  418 acaaacttatgaataatatataaaaa-cttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  22809232 acaagcttatgaataatatataaaaagcttatttatttgcataagctgttttgc 22809285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 463
Target Start/End: Original strand, 24841426 - 24841471
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||    
T  24841426 acaaacttataaataatatatacaaacttatttatttgcttaagtt 24841471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 38668227 - 38668186
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccgggat 245  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  38668227 gagaaattcaccttaaagatgaataagtggggtgtcagggat 38668186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 394
Target Start/End: Original strand, 22809144 - 22809208
Alignment:
Q  330 tgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    |||||||||||||| ||||| | ||||| ||||||| || |||||||||||||||| || |||||    
T  22809144 tgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttcataag 22809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 468
Target Start/End: Original strand, 28623279 - 28623323
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||    
T  28623279 ttataaataatacataaaaacttatttatttgcataagttgtttt 28623323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 40581116 - 40581168
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||| ||||||| |||||| |||||||||||||||||||| ||||||    
T  40581116 acaagcttattaataatacataaaagcttatttatttgcataagttgttttgc 40581168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 53218079 - 53218131
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||| ||||||||| ||||||    
T  53218079 acaagcttatgaataatacataaaatcttatttattcgcataagttgttttgc 53218131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 468
Target Start/End: Complemental strand, 3876249 - 3876203
Alignment:
Q  421 aacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  3876249 aacttatgaatta-atataaaaacttatttatttgcataagctatttt 3876203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 9320955 - 9320994
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  9320955 gagaaattcatctttaagatgaataagtggggtgttcggg 9320994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Original strand, 20174888 - 20174955
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||| ||||| | ||  ||||||||||||||| || |||||    
T  20174888 ttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataag 20174955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 27394606 - 27394567
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  27394606 gagaaattcaccttaaaggtgaataagtggggtgtccggg 27394567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 27471603 - 27471564
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  27471603 gagaaatttaccttaaagatgaataagtggggtgtccggg 27471564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 27817064 - 27817103
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  27817064 gagaaattcaacttaaagatgaataaatggggtgtccggg 27817103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 29226425 - 29226386
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  29226425 gagaaattcaccttaaagatgaataagtggggtgtacggg 29226386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 460
Target Start/End: Original strand, 30198998 - 30199037
Alignment:
Q  421 aacttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  30198998 aacttatgaataacacataaaaacttatttatttgcataa 30199037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 32421467 - 32421416
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtgggg 235  Q
    ||||||||||||| ||  | || |||||||||||||||||||||||||||||    
T  32421467 gtcaagtagtttagtggctagaaaaattcatcttaaagatgaataagtgggg 32421416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 33528201 - 33528236
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||    
T  33528201 gagaaattcaccttaaagatgaataagtggggtgtc 33528236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 39739373 - 39739334
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  39739373 gagaaattcaccttaaagatgaataagtgaggtgtccggg 39739334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 48816853 - 48816786
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataag 394  Q
    ||||||||||||||||||||||| | ||||||||||| | ||   |||||||||||||| || |||||    
T  48816853 ttatgcaaataaataagcttttaagttaatttataagatcttaccaacgaaaattgtatattcataag 48816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 49429559 - 49429520
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  49429559 gagaaattcaccttaaaggtgaataagtggggtgtccggg 49429520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 50676843 - 50676902
Alignment:
Q  184 gtcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| || || || |||||||||| ||||||| |||||||||||||||| ||||    
T  50676843 gtcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggg 50676902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 5129854 - 5129896
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  5129854 acaagcttatgaataatacattaaaacttatttatttgcataa 5129896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 10667445 - 10667395
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||| ||||||||||||| ||| || ||||||||||||| |||||||||||    
T  10667445 acaagcttatgaataatacatataagcttatttatttgcgtaagttatttt 10667395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 17752079 - 17752137
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||| |||||||||| |||||| | ||||||||||||| ||  |||||||||||||||    
T  17752079 ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtat 17752137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 385
Target Start/End: Original strand, 19053399 - 19053457
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtat 385  Q
    ||||| |||||||||| |||||| | ||||||||||||| ||  |||||||||||||||    
T  19053399 ttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtat 19053457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 460
Target Start/End: Original strand, 41601370 - 41601412
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||    
T  41601370 acaaacttaagaataatacataaaaactgatttatttgcataa 41601412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 458
Target Start/End: Original strand, 42956224 - 42956258
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcat 458  Q
    |||||||||||| ||||||||||||||||||||||    
T  42956224 ttatgaataatacataaaaacttatttatttgcat 42956258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Complemental strand, 51409440 - 51409390
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    ||||||| |||||||||| ||||||  ||||||||||||||||| ||||||    
T  51409440 acaaactcatgaataataaataaaagattatttatttgcataagctatttt 51409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 455
Target Start/End: Complemental strand, 3845902 - 3845865
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttg 455  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  3845902 acaagcttatgaataatatataaaagcttatttatttg 3845865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 463
Target Start/End: Complemental strand, 7292727 - 7292682
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||||||||||||||||| |||| | ||||| ||||||||||||||    
T  7292727 acaaacttatgaataatacataagagcttatgtatttgcataagtt 7292682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 31435497 - 31435534
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccg 241  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  31435497 gagaaattcaccttaaagatgaataagtgggatgtccg 31435534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 470
Target Start/End: Original strand, 33946592 - 33946633
Alignment:
Q  429 aataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||||| |||||| |||||||||||||||||| ||||||||    
T  33946592 aataataaataaaagcttatttatttgcataagctattttgc 33946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 36182545 - 36182508
Alignment:
Q  423 cttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  36182545 cttatgaataataaataaaaacttatttatttacataa 36182508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 45431724 - 45431687
Alignment:
Q  206 gaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  45431724 gaaattcaccttaaaggtgaataagtggggtgtccggg 45431687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 48717531 - 48717478
Alignment:
Q  185 tcaagtagtttaatgattggagaaattcatcttaaagatgaataagtggggtgt 238  Q
    ||||||||||||  |  |||||||||||| |||||||||||| |||||||||||    
T  48717531 tcaagtagtttagcggctggagaaattcaccttaaagatgaaaaagtggggtgt 48717478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 1102692 - 1102728
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtcc 240  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  1102692 gagaaattcaccttaaaggtgaataagtggggtgtcc 1102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 11528938 - 11528886
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||| |||||||||||| |||||| |||||||| || |||||||| ||||||    
T  11528938 acaaatttatgaataatacataaaagcttatttacttacataagttgttttgc 11528886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 24521246 - 24521286
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  24521246 aaacttgtgaataatacataaaatcttatttatttgcataa 24521286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 32901187 - 32901239
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    ||||| || ||||||||| |||||| ||||||||||| |||||||| ||||||    
T  32901187 acaaatttgtgaataataaataaaagcttatttatttacataagttgttttgc 32901239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 210 - 242
Target Start/End: Original strand, 37133912 - 37133944
Alignment:
Q  210 ttcatcttaaagatgaataagtggggtgtccgg 242  Q
    |||| ||||||||||||||||||||||||||||    
T  37133912 ttcaccttaaagatgaataagtggggtgtccgg 37133944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 419811 - 419772
Alignment:
Q  204 gagaaattcatcttaaagatgaataagtggggtgtccggg 243  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  419811 gagaaattcaccttaaagatgaataagtggggtgtccggg 419772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 14694 - 14760
Alignment:
Q  327 ttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaattgtatgtttataa 393  Q
    ||||||||||||||||||||| | | ||||||||||||| |   ||||||||||||||| |||||||    
T  14694 ttatgcaaataaataagctttcatgttaatttataagttctcactaacgaaaattgtatatttataa 14760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Original strand, 14787 - 14828
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||||||||||| |||||| |||||||||||| |||||    
T  14787 aaacttatgaataatacataaaagcttatttatttgtataag 14828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 24792 - 24740
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| | ||||||    
T  24792 acaagcttatgaataatacataaaagcttatttatttgcataagctgttttgc 24740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 420 - 468
Target Start/End: Original strand, 279032 - 279080
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| ||||||| ||||||| |||| |||||||||||||||||||    
T  279032 aaacttataaataatacataaaaatttatgtatttgcataagttatttt 279080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 1105 - 1054
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttg 469  Q
    |||| |||||| |||||| |||||| |||||||||||||||||||| |||||    
T  1105 acaatcttatggataataaataaaagcttatttatttgcataagttgttttg 1054  T

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Target: scaffold1367; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Original strand, 1171 - 1204
Alignment:
Q  435 atataaaaacttatttatttgcataagttatttt 468  Q
    |||||||| |||||||||||||||||||||||||    
T  1171 atataaaagcttatttatttgcataagttatttt 1204  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 381
Target Start/End: Original strand, 24336 - 24391
Alignment:
Q  326 tttatgcaaataaataagcttttacgataatttataagtttttgttaacgaaaatt 381  Q
    |||||||||||||||| ||||||| ||||||| | ||||||||  |||||||||||    
T  24336 tttatgcaaataaataggcttttatgataattcacaagtttttactaacgaaaatt 24391  T

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Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 459
Target Start/End: Original strand, 43855 - 43896
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcata 459  Q
    |||| ||| ||||||||| |||||||||||||||||||||||    
T  43855 acaagcttttgaataatacataaaaacttatttatttgcata 43896  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 463
Target Start/End: Complemental strand, 178545 - 178502
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataagtt 463  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||    
T  178545 aaacttataaataatacataaaagcttatttatttgcataagtt 178502  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 59313 - 59272
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataag 461  Q
    |||||||| |||||||  ||||||||||||||||||||||||    
T  59313 aaacttataaataatacttaaaaacttatttatttgcataag 59272  T

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Target: scaffold1088 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 1341 - 1289
Alignment:
Q  418 acaaacttatgaataatatataaaaacttatttatttgcataagttattttgc 470  Q
    |||||||||| |||||||||| ||  |||||| ||||||||||||| ||||||    
T  1341 acaaacttataaataatatattaatccttattcatttgcataagttgttttgc 1289  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 38497 - 38533
Alignment:
Q  424 ttatgaataatatataaaaacttatttatttgcataa 460  Q
    |||| ||||||| ||||||||||||||||||||||||    
T  38497 ttataaataatacataaaaacttatttatttgcataa 38533  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 242680 - 242720
Alignment:
Q  420 aaacttatgaataatatataaaaacttatttatttgcataa 460  Q
    ||||||||  |||||| ||||||||||||||||||||||||    
T  242680 aaacttatatataatacataaaaacttatttatttgcataa 242720  T

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