View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14325_low_5 (Length: 403)
Name: NF14325_low_5
Description: NF14325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14325_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 22 - 270
Target Start/End: Original strand, 42935650 - 42935901
Alignment:
| Q |
22 |
ctttcaacacattcaacgttgccaacgtagcttcgcggttcttaacaacaccaccaacattttcatgatcaac---atcagtagtattggtctttggctc |
118 |
Q |
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| T |
42935650 |
ctttcaacacattcaacgttgccaacgtagcttcacggttcttaacaacaccaccgacattttcatgatcaaccacatcagaagtattggtctttggctc |
42935749 |
T |
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| Q |
119 |
catcacagttcctgatgctgtaacaacatcatcctcttggatcactttttcttcttcgaaccgaacttgtttcacaacttcatcatctttgctttgatcc |
218 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42935750 |
catcacagttcctgatgctgtaacaacagcatcctcttggatcactttttcttcttcgaaccgaacttgtttcacaacttcatcatctttgctttgatcc |
42935849 |
T |
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| Q |
219 |
tttgggaatacaggcacaagttccaatccatcttcattgaaattccagccac |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42935850 |
tttgggaatacaggcacaagttccaatccatcttcattgaaattccagccac |
42935901 |
T |
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