View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14325_low_9 (Length: 326)

Name: NF14325_low_9
Description: NF14325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14325_low_9
NF14325_low_9
[»] chr6 (21 HSPs)
chr6 (1-110)||(23027233-23027342)
chr6 (6-109)||(16381891-16381994)
chr6 (1-109)||(15077884-15077992)
chr6 (6-109)||(14624875-14624978)
chr6 (6-109)||(16233688-16233791)
chr6 (1-106)||(21927860-21927965)
chr6 (6-109)||(1648332-1648435)
chr6 (6-109)||(16098710-16098813)
chr6 (6-109)||(18572311-18572414)
chr6 (6-109)||(23996908-23997011)
chr6 (6-109)||(18837426-18837529)
chr6 (54-108)||(19865395-19865449)
chr6 (54-94)||(27566513-27566553)
chr6 (54-96)||(16962976-16963018)
chr6 (54-108)||(22078209-22078263)
chr6 (54-106)||(27330954-27331006)
chr6 (54-106)||(27391694-27391746)
chr6 (54-108)||(5838738-5838792)
chr6 (57-107)||(15460047-15460097)
chr6 (54-96)||(18407473-18407515)
chr6 (54-108)||(20636820-20636874)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-109)||(24785-24893)
scaffold0021 (6-106)||(72016-72116)
scaffold0021 (6-100)||(32798-32892)
[»] chr2 (20 HSPs)
chr2 (2-110)||(23816955-23817063)
chr2 (6-109)||(24831100-24831203)
chr2 (7-109)||(24569581-24569683)
chr2 (1-110)||(25129069-25129178)
chr2 (6-109)||(12640146-12640249)
chr2 (7-110)||(22761481-22761584)
chr2 (6-109)||(22276705-22276808)
chr2 (3-106)||(21906085-21906188)
chr2 (54-108)||(23107644-23107698)
chr2 (54-108)||(22756379-22756433)
chr2 (54-94)||(21325194-21325234)
chr2 (54-106)||(24707398-24707450)
chr2 (54-106)||(21890634-21890686)
chr2 (57-108)||(1064229-1064280)
chr2 (54-108)||(23066866-23066920)
chr2 (6-108)||(24642169-24642271)
chr2 (54-106)||(30210832-30210884)
chr2 (111-139)||(35082025-35082053)
chr2 (54-94)||(41608313-41608353)
chr2 (54-106)||(45529986-45530038)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-109)||(24702-24810)
scaffold0008 (1-110)||(232377-232486)
[»] chr8 (22 HSPs)
chr8 (1-109)||(20652149-20652257)
chr8 (1-109)||(22983290-22983398)
chr8 (1-108)||(21196319-21196426)
chr8 (6-109)||(21850153-21850256)
chr8 (1-98)||(23156839-23156936)
chr8 (9-110)||(22316056-22316157)
chr8 (1-110)||(25282987-25283096)
chr8 (1-109)||(25283213-25283321)
chr8 (6-109)||(16876911-16877014)
chr8 (7-87)||(23901138-23901218)
chr8 (7-109)||(22283867-22283969)
chr8 (3-108)||(22366482-22366587)
chr8 (54-108)||(19978877-19978931)
chr8 (54-108)||(30312961-30313015)
chr8 (56-108)||(21166355-21166407)
chr8 (54-88)||(16407883-16407917)
chr8 (54-108)||(21251851-21251905)
chr8 (54-108)||(21393682-21393736)
chr8 (54-108)||(21788176-21788230)
chr8 (54-106)||(21043355-21043407)
chr8 (56-108)||(22040771-22040823)
chr8 (54-94)||(15534290-15534330)
[»] chr7 (18 HSPs)
chr7 (6-110)||(15364725-15364829)
chr7 (6-109)||(27107156-27107259)
chr7 (7-106)||(45147338-45147437)
chr7 (7-109)||(7824686-7824788)
chr7 (6-110)||(14937132-14937236)
chr7 (1-106)||(4440708-4440813)
chr7 (1-106)||(17924431-17924536)
chr7 (1-109)||(13455527-13455635)
chr7 (1-106)||(21673918-21674023)
chr7 (27-110)||(13353956-13354039)
chr7 (11-109)||(17144643-17144741)
chr7 (7-109)||(23642234-23642336)
chr7 (54-108)||(16699-16753)
chr7 (111-159)||(11908044-11908091)
chr7 (57-106)||(13666374-13666423)
chr7 (111-139)||(6350741-6350769)
chr7 (54-94)||(9596890-9596930)
chr7 (56-108)||(15154040-15154092)
[»] scaffold0692 (1 HSPs)
scaffold0692 (6-109)||(3251-3354)
[»] scaffold0225 (1 HSPs)
scaffold0225 (6-109)||(24221-24324)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-109)||(41085-41188)
[»] chr5 (15 HSPs)
chr5 (6-109)||(21936743-21936846)
chr5 (6-109)||(24581920-24582023)
chr5 (1-109)||(23504147-23504255)
chr5 (6-109)||(27011794-27011897)
chr5 (8-109)||(25243905-25244006)
chr5 (8-109)||(25308057-25308158)
chr5 (3-109)||(19566244-19566350)
chr5 (54-108)||(18776546-18776600)
chr5 (54-108)||(23574513-23574567)
chr5 (54-106)||(23440986-23441038)
chr5 (54-108)||(21881725-21881779)
chr5 (54-94)||(23517302-23517342)
chr5 (57-108)||(20343043-20343094)
chr5 (57-108)||(37542937-37542988)
chr5 (54-108)||(25423965-25424019)
[»] chr3 (25 HSPs)
chr3 (6-109)||(30138231-30138334)
chr3 (6-109)||(30147782-30147885)
chr3 (1-110)||(17193514-17193623)
chr3 (7-109)||(16257570-16257672)
chr3 (6-109)||(13966952-13967055)
chr3 (6-109)||(16742315-16742418)
chr3 (1-106)||(6712024-6712129)
chr3 (1-109)||(6152463-6152571)
chr3 (6-109)||(8274011-8274114)
chr3 (1-106)||(18749085-18749190)
chr3 (10-110)||(15095434-15095534)
chr3 (7-109)||(266907-267009)
chr3 (31-109)||(15610554-15610632)
chr3 (54-108)||(15062207-15062261)
chr3 (54-108)||(16371876-16371930)
chr3 (54-106)||(12498711-12498763)
chr3 (54-108)||(16491794-16491848)
chr3 (54-108)||(16692627-16692681)
chr3 (54-108)||(16806539-16806593)
chr3 (3-108)||(9523131-9523236)
chr3 (112-155)||(11658518-11658561)
chr3 (54-93)||(14126222-14126261)
chr3 (54-108)||(14876111-14876165)
chr3 (54-108)||(15209354-15209408)
chr3 (54-108)||(17490313-17490367)
[»] chr1 (8 HSPs)
chr1 (6-109)||(20830837-20830940)
chr1 (1-106)||(22135005-22135110)
chr1 (1-92)||(21201751-21201842)
chr1 (111-158)||(14932074-14932121)
chr1 (54-106)||(21749800-21749852)
chr1 (6-105)||(19855116-19855215)
chr1 (54-108)||(22361690-22361744)
chr1 (55-108)||(16078102-16078155)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-109)||(180752-180854)
[»] chr4 (13 HSPs)
chr4 (3-109)||(14998109-14998215)
chr4 (3-109)||(13248438-13248544)
chr4 (6-109)||(9291631-9291734)
chr4 (6-109)||(15292531-15292634)
chr4 (1-106)||(38811698-38811803)
chr4 (1-100)||(12342247-12342345)
chr4 (4-110)||(16028905-16029010)
chr4 (54-92)||(15147015-15147053)
chr4 (54-108)||(18226560-18226614)
chr4 (57-108)||(15078482-15078533)
chr4 (1-108)||(20891773-20891880)
chr4 (54-88)||(16354579-16354613)
chr4 (54-107)||(12524520-12524573)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-106)||(10116-10221)
[»] scaffold0047 (1 HSPs)
scaffold0047 (3-104)||(473-574)
[»] scaffold0077 (1 HSPs)
scaffold0077 (6-109)||(27642-27745)
[»] scaffold0066 (1 HSPs)
scaffold0066 (6-109)||(46981-47084)
[»] scaffold0162 (1 HSPs)
scaffold0162 (3-109)||(13732-13838)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-109)||(430-538)
[»] scaffold0028 (1 HSPs)
scaffold0028 (9-109)||(105949-106049)
[»] scaffold0554 (1 HSPs)
scaffold0554 (6-109)||(3985-4088)
[»] scaffold0310 (1 HSPs)
scaffold0310 (3-110)||(14112-14219)
[»] scaffold0302 (1 HSPs)
scaffold0302 (6-109)||(6002-6105)
[»] scaffold0266 (1 HSPs)
scaffold0266 (6-109)||(9237-9340)
[»] scaffold0207 (1 HSPs)
scaffold0207 (3-109)||(18871-18977)
[»] scaffold0091 (1 HSPs)
scaffold0091 (6-100)||(45324-45418)
[»] scaffold0132 (2 HSPs)
scaffold0132 (7-108)||(15484-15585)
scaffold0132 (6-49)||(44365-44408)
[»] scaffold0117 (1 HSPs)
scaffold0117 (6-106)||(803-903)
[»] scaffold0243 (1 HSPs)
scaffold0243 (7-110)||(318-421)
[»] scaffold0023 (2 HSPs)
scaffold0023 (6-109)||(55276-55379)
scaffold0023 (54-108)||(28749-28803)
[»] scaffold0876 (1 HSPs)
scaffold0876 (7-109)||(3370-3472)
[»] scaffold0327 (1 HSPs)
scaffold0327 (1-106)||(7991-8096)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-106)||(8087-8192)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-109)||(9808-9916)
[»] scaffold0369 (1 HSPs)
scaffold0369 (6-109)||(289-392)
[»] scaffold0218 (1 HSPs)
scaffold0218 (6-109)||(3320-3423)
[»] scaffold0124 (1 HSPs)
scaffold0124 (10-109)||(7184-7283)
[»] scaffold0610 (1 HSPs)
scaffold0610 (13-109)||(8266-8362)
[»] scaffold0235 (1 HSPs)
scaffold0235 (7-106)||(26634-26733)
[»] scaffold0387 (1 HSPs)
scaffold0387 (8-69)||(14967-15028)
[»] scaffold0058 (1 HSPs)
scaffold0058 (27-108)||(75406-75487)
[»] scaffold0081 (2 HSPs)
scaffold0081 (54-108)||(19477-19531)
scaffold0081 (54-108)||(34901-34955)
[»] scaffold0017 (1 HSPs)
scaffold0017 (54-108)||(196855-196909)
[»] scaffold0205 (1 HSPs)
scaffold0205 (27-108)||(9444-9525)
[»] scaffold0005 (1 HSPs)
scaffold0005 (54-94)||(278221-278261)
[»] scaffold0042 (1 HSPs)
scaffold0042 (3-94)||(39211-39302)
[»] scaffold0501 (1 HSPs)
scaffold0501 (54-108)||(3069-3123)
[»] scaffold0198 (1 HSPs)
scaffold0198 (54-108)||(24373-24427)
[»] scaffold0020 (2 HSPs)
scaffold0020 (54-108)||(181074-181128)
scaffold0020 (57-108)||(100929-100980)
[»] scaffold0324 (1 HSPs)
scaffold0324 (54-107)||(19380-19433)
[»] scaffold0106 (1 HSPs)
scaffold0106 (3-108)||(14863-14968)
[»] scaffold0012 (1 HSPs)
scaffold0012 (54-106)||(229918-229970)
[»] scaffold0676 (1 HSPs)
scaffold0676 (54-108)||(6889-6943)
[»] scaffold0546 (1 HSPs)
scaffold0546 (54-108)||(3782-3836)
[»] scaffold0540 (1 HSPs)
scaffold0540 (54-108)||(7708-7762)
[»] scaffold0375 (1 HSPs)
scaffold0375 (54-96)||(3203-3245)
[»] scaffold0293 (1 HSPs)
scaffold0293 (54-108)||(13343-13397)
[»] scaffold0109 (2 HSPs)
scaffold0109 (54-108)||(9471-9525)
scaffold0109 (54-108)||(32950-33004)
[»] scaffold0044 (1 HSPs)
scaffold0044 (54-108)||(15235-15289)
[»] scaffold0031 (1 HSPs)
scaffold0031 (54-108)||(63408-63462)
[»] scaffold0228 (1 HSPs)
scaffold0228 (54-106)||(571-623)
[»] scaffold0026 (1 HSPs)
scaffold0026 (54-110)||(29820-29876)
[»] scaffold2094 (1 HSPs)
scaffold2094 (57-108)||(439-490)
[»] scaffold1710 (1 HSPs)
scaffold1710 (7-106)||(692-791)
[»] scaffold0403 (1 HSPs)
scaffold0403 (3-106)||(7196-7299)
[»] scaffold1602 (1 HSPs)
scaffold1602 (54-108)||(1444-1498)
[»] scaffold0621 (1 HSPs)
scaffold0621 (54-108)||(2342-2396)
[»] scaffold0358 (1 HSPs)
scaffold0358 (54-108)||(6924-6978)
[»] scaffold0333 (1 HSPs)
scaffold0333 (54-108)||(16530-16584)
[»] scaffold0284 (1 HSPs)
scaffold0284 (54-108)||(22742-22796)
[»] scaffold0079 (1 HSPs)
scaffold0079 (54-88)||(25849-25883)
[»] scaffold0001 (1 HSPs)
scaffold0001 (54-108)||(390577-390631)
[»] scaffold1355 (1 HSPs)
scaffold1355 (54-107)||(1551-1604)
[»] scaffold0507 (1 HSPs)
scaffold0507 (3-108)||(9794-9899)
[»] scaffold0145 (1 HSPs)
scaffold0145 (54-107)||(39389-39442)
[»] scaffold0093 (1 HSPs)
scaffold0093 (57-106)||(27139-27188)
[»] scaffold0220 (1 HSPs)
scaffold0220 (54-94)||(214-254)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23027342 - 23027233
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23027342 agatactatcccacttccactccggcacaaacaacggttgcatcaaacccgacgatttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 23027243  T
Q  101 gacaaactct 110  Q
     |||||||||    
T  23027242 aacaaactct 23027233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 16381994 - 16381891
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16381994 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 16381895  T
Q  106 actc 109  Q
    ||||    
T  16381894 actc 16381891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15077992 - 15077884
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  15077992 agatactatcccacttccactctggcacaaacaacagttgcatcaaacccgacagtttctggtgttcaatcttcgacttttgacaaaccaaacaagcata 15077893  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  15077892 tacaaactc 15077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 14624978 - 14624875
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| ||||    
T  14624978 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgacaaaccaaacaagcataaacaa 14624879  T
Q  106 actc 109  Q
    ||||    
T  14624878 actc 14624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 16233688 - 16233791
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16233688 ctatcccacttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 16233787  T
Q  106 actc 109  Q
    ||||    
T  16233788 actc 16233791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 21927860 - 21927965
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  21927860 agatactatcccacttccactctggcacaaacaacggttgcatcaaactcaacggtctctgatgttcaatcttcgacttttgacaaaccaaacaagcata 21927959  T
Q  101 gacaaa 106  Q
     |||||    
T  21927960 aacaaa 21927965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 1648435 - 1648332
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  1648435 ctatcccatttccactctggcacaaacaacggttgcatcaaacccaacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 1648336  T
Q  106 actc 109  Q
    ||||    
T  1648335 actc 1648332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 16098710 - 16098813
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| | |||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16098710 ctatcccacttccactctagcacgaacaacagttgcatcaaactcgacggtttctgatgttcaatcttcgacttatgacaaaccaaacaagcatagacaa 16098809  T
Q  106 actc 109  Q
    ||||    
T  16098810 actc 16098813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 18572311 - 18572414
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18572311 ctatctcacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 18572410  T
Q  106 actc 109  Q
    ||||    
T  18572411 actc 18572414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 23996908 - 23997011
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||| ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  23996908 ctatcccatttccactctggcacaaacaatggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 23997007  T
Q  106 actc 109  Q
    ||||    
T  23997008 actc 23997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 18837529 - 18837426
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | || ||||||||||||||||||||||| ||||    
T  18837529 ctatcccacgtccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcattgatttctgacaaaccaaacaagcataaacaa 18837430  T
Q  106 actc 109  Q
    ||||    
T  18837429 actc 18837426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 19865395 - 19865449
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19865395 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19865449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 27566553 - 27566513
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  27566553 ggtttctgatgttcaatcttcgacttctgacaaactaaaca 27566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 16963018 - 16962976
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 96  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  16963018 ggtttctgatgctcaatcttcgacttctgacaaatcaaacaag 16962976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 22078263 - 22078209
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  22078263 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 22078209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 27331006 - 27330954
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27331006 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27330954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 27391746 - 27391694
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  27391746 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 27391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 5838792 - 5838738
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| || | ||||||||||||||||| |||||||| ||| |||||||    
T  5838792 ggtttctgatgctcgaccttcgacttctgacaaatcaaacaagaatacacaaact 5838738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 15460047 - 15460097
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||||||||||||||| ||||||||||||  |||||| ||||| ||||||    
T  15460047 ttctgatgttcaatcttagacttctgacaagtcaaacacgcatacacaaac 15460097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 18407515 - 18407473
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 96  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||    
T  18407515 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaag 18407473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 20636874 - 20636820
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  20636874 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 20636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24785 - 24893
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  24785 agatactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttttgacaaaccaatcaagcata 24884  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  24885 tacaaactc 24893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 72016 - 72116
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  72016 ctatcccacttccactctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctaacaaaccaaacaagcatatacaa 72115  T
Q  106 a 106  Q
    |    
T  72116 a 72116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 32892 - 32798
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32892 ctatcccacttccactctggaacaaacaatggttacatcaaacctgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaaccata 32798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 23817063 - 23816955
Alignment:
Q  2 gatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatag 101  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23817063 gatactatcccacttccactctggcacaaacaacggttgtatcaaacctgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataa 23816964  T
Q  102 acaaactct 110  Q
    |||||||||    
T  23816963 acaaactct 23816955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 24831203 - 24831100
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24831203 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 24831104  T
Q  106 actc 109  Q
    ||||    
T  24831103 actc 24831100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 24569683 - 24569581
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||    
T  24569683 tatcccacttccactctggcacaaacaacagttgcatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaacaagcatatacaaa 24569584  T
Q  107 ctc 109  Q
    |||    
T  24569583 ctc 24569581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25129069 - 25129178
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  25129069 agatattatcccatttccactctggcataaacaacggttgcatcaaacccgacggtttatgatattcaatcttcgacttctgacaaaccaaacaagcata 25129168  T
Q  101 gacaaactct 110  Q
     |||||||||    
T  25129169 aacaaactct 25129178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 12640249 - 12640146
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||| ||| ||||    
T  12640249 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaaccaagcaagaataaacaa 12640150  T
Q  106 actc 109  Q
    ||||    
T  12640149 actc 12640146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 22761584 - 22761481
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| |||||    
T  22761584 tatcccacttccactctggcacaaacaacggttacatcaaacccgacggtttctgatgttcaatcttcgatttctaacaaaccaaagaagcataaacaaa 22761485  T
Q  107 ctct 110  Q
    ||||    
T  22761484 ctct 22761481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 22276705 - 22276808
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  22276705 ctatcccatttccattttggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttctatttctgacaaaccaaacaagcataaacaa 22276804  T
Q  106 actc 109  Q
    ||||    
T  22276805 actc 22276808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 21906188 - 21906085
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    |||||||| ||||||||||  || |||||||||||||||||||| |  ||||||||||||||| ||||||| |||||||||||||||| ||||||||| |    
T  21906188 atactatcacacttccactccggtacaaacaacggttgcatcaagcttgacggtttctgatgtccaatcttagacttctgacaaaccacacaagcataca 21906089  T
Q  103 caaa 106  Q
    ||||    
T  21906088 caaa 21906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 23107698 - 23107644
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  23107698 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 23107644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 22756433 - 22756379
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||||||||||||| |||||||||||| | ||| |||||||    
T  22756433 ggtttctgatgttcaatcttcgacttcttacaaaccaaacaggaatacacaaact 22756379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 21325234 - 21325194
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  21325234 ggtttctgatgttcaatcttcgacttctgacaaactaaaca 21325194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 24707450 - 24707398
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||    
T  24707450 ggtttctaatgttcaatcttcgacttctgacaaactaaacaagaatacacaaa 24707398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 21890686 - 21890634
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||    
T  21890686 ggtttctaatgttcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21890634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 1064229 - 1064280
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||| |||||||    
T  1064229 ttctgatgctcaaccttggacttctgacaaaccaaacaggcataaacaaact 1064280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 23066866 - 23066920
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||||||||||| |||||||  ||| |||||||    
T  23066866 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaataatacacaaact 23066920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 24642169 - 24642271
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||||||||||  ||||||  |||||||  || ||| || |  || |||||||| |||| ||| ||||||||||||  |||||| ||||||||||    
T  24642169 ctatcccacttccactccggcacatccaacggtgccaacaaccctgcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatagacaa 24642268  T
Q  106 act 108  Q
    |||    
T  24642269 act 24642271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 30210884 - 30210832
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  30210884 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 30210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 139
Target Start/End: Original strand, 35082025 - 35082053
Alignment:
Q  111 catagctctaactaacttgccacataagc 139  Q
    |||||||||||||||||||||||||||||    
T  35082025 catagctctaactaacttgccacataagc 35082053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 41608353 - 41608313
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||||||||  ||||||||||||||||| |||||    
T  41608353 ggtttctgatgttcaactttcgacttctgacaaactaaaca 41608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 45529986 - 45530038
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||||  ||||||||||||||||  ||||| ||||| |||||    
T  45529986 ggtttctgatgttcaactttcgacttctgacaaattaaacacgcatacacaaa 45530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24702 - 24810
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| ||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24702 agatattatcccacttccactctggtacaaacaacgattgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 24801  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  24802 cacaaactc 24810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 232377 - 232486
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||||||||  | ||||||||| ||||||||||||| |||||  || |||||||||||||| ||||||| ||||||||||||||||||    
T  232377 agatactatcccacttccactccgacacaaacaatggttgcatcaaactcgacgacttttgatgttcaatctttgacttctaacaaaccaaacaagcata 232476  T
Q  101 gacaaactct 110  Q
     |||||||||    
T  232477 cacaaactct 232486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20652257 - 20652149
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20652257 agatactatcccacttccactctagcacaaacaatggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaagcaagcata 20652158  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  20652157 cacaaactc 20652149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 22983290 - 22983398
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22983290 agatactatcccaattccactctggcacaaacaacggttgcatcaaaccctgcggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 22983389  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  22983390 tacaaactc 22983398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21196426 - 21196319
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  21196426 agatactatcccacctccactatggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatttttgacttctgacaaaccaaacaagcata 21196327  T
Q  101 gacaaact 108  Q
     |||||||    
T  21196326 aacaaact 21196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 21850256 - 21850153
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21850256 ctatcccatttccactatggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 21850157  T
Q  106 actc 109  Q
    ||||    
T  21850156 actc 21850153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23156936 - 23156839
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagca 98  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23156936 agatactatcccacttccaatctggtacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgacaaaccaaacaagca 23156839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 22316056 - 22316157
Alignment:
Q  9 tcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  22316056 tcccacttccactctggcacaaacaacggttgcatcaaactcgatgatttctaatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaact 22316155  T
Q  109 ct 110  Q
    ||    
T  22316156 ct 22316157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25282987 - 25283096
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||    
T  25282987 agatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaaccaaacaagcata 25283086  T
Q  101 gacaaactct 110  Q
     |||||||||    
T  25283087 cacaaactct 25283096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25283213 - 25283321
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||    
T  25283213 agatactatcctacttccactcaggcacaaacaacggttgcatcaaaccctacatcttctgatgttcaatcttagacttctgacaaaccaaacaagcata 25283312  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  25283313 cacaaactc 25283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 16877014 - 16876911
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  ||| ||| ||||    
T  16877014 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaaccaagtaagaataaacaa 16876915  T
Q  106 actc 109  Q
    ||||    
T  16876914 actc 16876911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 23901138 - 23901218
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaa 87  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  23901138 tatcccacttccaatctagcacaaacaacggttgcatcaaacccgacgatttatgatgttcaatcttcgacttctgacaaa 23901218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 22283867 - 22283969
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    |||| ||||||||||  || | ||||||||||||| |||||||||| |  ||||||||||||||||| ||||||||||| | |||||||||||| |||||    
T  22283867 tatctcacttccactcaggaataaacaacggttgcgtcaaacccgaagacttctgatgttcaatcttagacttctgacagatcaaacaagcatacacaaa 22283966  T
Q  107 ctc 109  Q
    |||    
T  22283967 ctc 22283969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 22366587 - 22366482
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    |||||||||||||||||||  |||||||| || ||||||||||  || |||||  ||||||| || ||||| || ||||||||||||||||||||| | |    
T  22366587 atactatcccacttccactccggcacaaaaaatggttgcatcactcctgacggcatctgatgctcgatcttagatttctgacaaaccaaacaagcaaaca 22366488  T
Q  103 caaact 108  Q
    ||||||    
T  22366487 caaact 22366482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 19978877 - 19978931
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19978877 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19978931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 30313015 - 30312961
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||    
T  30313015 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatagacaaact 30312961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 21166407 - 21166355
Alignment:
Q  56 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||||||||||||| |||||||||| | ||| |||||||    
T  21166407 tttctgatgttcaatcttcgacttctgataaaccaaacaggaatacacaaact 21166355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 16407917 - 16407883
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaac 88  Q
    |||||||||||||||||||||||||||||||||||    
T  16407917 ggtttctgatgttcaatcttcgacttctgacaaac 16407883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 21251851 - 21251905
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  21251851 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatatacaaact 21251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 21393736 - 21393682
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||||| |||||||    
T  21393736 ggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaact 21393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 21788230 - 21788176
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||||| |||||||    
T  21788230 ggtttctgatgctcaaccttcgacttctggcaaatcaaacaagcatacacaaact 21788176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 21043355 - 21043407
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| |||| |||||| ||||||||||||||||||| ||| |||||    
T  21043355 ggtttctgatgctcaaccttcgatttctgacaaaccaaacaagaatacacaaa 21043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 22040771 - 22040823
Alignment:
Q  56 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  22040771 tttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 22040823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 15534290 - 15534330
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||| |||||||| |||||||||||||| |||||    
T  15534290 ggtttctgatgctcaatctttgacttctgacaaactaaaca 15534330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 15364725 - 15364829
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  15364725 ctatcccacttccactttggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgacaaaccaaactagcataaacaa 15364824  T
Q  106 actct 110  Q
    |||||    
T  15364825 actct 15364829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 27107259 - 27107156
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27107259 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 27107160  T
Q  106 actc 109  Q
    ||||    
T  27107159 actc 27107156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 45147338 - 45147437
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45147338 tatcccatttccactctggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaaa 45147437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 7824686 - 7824788
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  7824686 tatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaaa 7824785  T
Q  107 ctc 109  Q
    |||    
T  7824786 ctc 7824788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 14937132 - 14937236
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  14937132 ctatcccacttccactgtggcacaaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttatgacaaaccaaactagcataaacaa 14937231  T
Q  106 actct 110  Q
    |||||    
T  14937232 actct 14937236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4440708 - 4440813
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||    
T  4440708 agatattatcccacttccactctggcacaaataacggttgcatcaaaccgtacggtttctgatgttcaatcgtcgacttctgacaaaccatacaagcata 4440807  T
Q  101 gacaaa 106  Q
     |||||    
T  4440808 tacaaa 4440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17924431 - 17924536
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  17924431 agatactatctcactttcactctggctcaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgacttctgacaaacaaagcaagcata 17924530  T
Q  101 gacaaa 106  Q
     |||||    
T  17924531 aacaaa 17924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13455527 - 13455635
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||| || ||||| | ||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  13455527 agatactatctcatttccattctggaacaaacaacggttgcatcaaacctaacggtttctgatgttcaaccttcgacttctgacaaaccaagcaagcata 13455626  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  13455627 aacaaactc 13455635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21674023 - 21673918
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||| |||||||||| | |||||| |||||||||||||||||| |||||| | ||||||||||||||||| |||||||||||||| ||||||||    
T  21674023 agatactatctcacttccactctagcacaatcaacggttgcatcaaacctgacggtctttgatgttcaatcttcgatttctgacaaaccaagcaagcata 21673924  T
Q  101 gacaaa 106  Q
     |||||    
T  21673923 aacaaa 21673918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 13353956 - 13354039
Alignment:
Q  27 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactct 110  Q
    ||||||||||||||||||||||| || | |||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  13353956 acaaacaacggttgcatcaaacctgatgatttctgatgttcaatcttagacttctaacaaaccaaacaagcataaacaaactct 13354039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 17144741 - 17144643
Alignment:
Q  11 ccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 109  Q
    |||||||||||  || |||||||||| ||||||||||||||| || |||||||||| |||||| ||||| ||||||| |||||||||||| ||||||||    
T  17144741 ccacttccactccggtacaaacaacgattgcatcaaacccgatggcttctgatgttaaatcttagacttttgacaaatcaaacaagcatacacaaactc 17144643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 23642234 - 23642336
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgac-aaaccaaacaagcatagacaa 105  Q
    |||||||||||||||  || |||||||||||||| |||||||| ||||  |||||||||||||| || ||||| |||| ||| |||||||||||| ||||    
T  23642234 tatcccacttccactcagggacaaacaacggttgaatcaaacctgacgacttctgatgttcaatgttagactt-tgacaaaatcaaacaagcatacacaa 23642332  T
Q  106 actc 109  Q
    ||||    
T  23642333 actc 23642336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 16753 - 16699
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16753 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 11908044 - 11908091
Alignment:
Q  111 catagctctaactaacttgccacataagcatgtaaaactgttatgacag 159  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||||    
T  11908044 catagctctaactaacttgccacgtaagcatgtaata-tgttatgacag 11908091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 13666374 - 13666423
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||| ||||||||||||||||  |||||| ||||| |||||    
T  13666374 ttctgatgttcaaccttcgacttctgacaagtcaaacatgcatacacaaa 13666423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 139
Target Start/End: Original strand, 6350741 - 6350769
Alignment:
Q  111 catagctctaactaacttgccacataagc 139  Q
    |||||||||||||||||||||||||||||    
T  6350741 catagctctaactaacttgccacataagc 6350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 9596890 - 9596930
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||| ||| ||||||||||||||||||||||| |||||    
T  9596890 ggtttctaatgctcaatcttcgacttctgacaaactaaaca 9596930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 15154092 - 15154040
Alignment:
Q  56 tttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  15154092 tttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 15154040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 3354 - 3251
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  3354 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 3255  T
Q  106 actc 109  Q
    ||||    
T  3254 actc 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 24221 - 24324
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  24221 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 24320  T
Q  106 actc 109  Q
    ||||    
T  24321 actc 24324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 41085 - 41188
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  41085 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 41184  T
Q  106 actc 109  Q
    ||||    
T  41185 actc 41188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 21936846 - 21936743
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  21936846 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 21936747  T
Q  106 actc 109  Q
    ||||    
T  21936746 actc 21936743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 24581920 - 24582023
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  24581920 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaaccaaacaagcataaacaa 24582019  T
Q  106 actc 109  Q
    ||||    
T  24582020 actc 24582023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 23504147 - 23504255
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||    
T  23504147 agatactatcccaattccactctggcacaaacaacagttgcatcaaacccgacggtctctgatgttcaatcttcgatttttgacaaaccaaacaagcata 23504246  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  23504247 aacaaactc 23504255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 27011794 - 27011897
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  27011794 ctatctcacttccactctggcacaaacaacggttgcatcaaacccgacgttctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 27011893  T
Q  106 actc 109  Q
    ||||    
T  27011894 actc 27011897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 25244006 - 25243905
Alignment:
Q  8 atcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25244006 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25243907  T
Q  108 tc 109  Q
    ||    
T  25243906 tc 25243905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 25308158 - 25308057
Alignment:
Q  8 atcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||    
T  25308158 atcccgcttccactctagcacaaacaacggttgcatcaaacccgatgacttctgatgttcaatcttagacttctgacaaatcaaacaagcatgcacaaac 25308059  T
Q  108 tc 109  Q
    ||    
T  25308058 tc 25308057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 19566350 - 19566244
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||| ||||||| |||||||||||||||||||||||   | ||||| |||||||| |||||||| || ||||||||||| |||||| |||| |    
T  19566350 atactatcccaattccactctggcacaaacaacggttgcatcatttcagacggcttctgatgctcaatcttagatttctgacaaacgaaacaatcataca 19566251  T
Q  103 caaactc 109  Q
     ||||||    
T  19566250 aaaactc 19566244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 18776546 - 18776600
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  18776546 ggtttctgatgctcaatcttcgacttctgacaaactaaacaagaatacacaaact 18776600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 23574513 - 23574567
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||    
T  23574513 ggtttctgatgttcaatcttcgacttctgacaaactaaacaggaatacacaaact 23574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 23440986 - 23441038
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||| |||||    
T  23440986 ggtttctgatgttcaatcttcgacttatgacaaactaaacaagaatacacaaa 23441038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 21881725 - 21881779
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||||| |||||||||||||| ||||| | ||| |||||||    
T  21881725 ggtttctgatgttcaatctttgacttctgacaaactaaacaggaatacacaaact 21881779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 23517302 - 23517342
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  23517302 ggtttctgatgttcaatcttcaacttctgacaaactaaaca 23517342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 20343043 - 20343094
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  20343043 ttctgatgttcaaccttggacttctgacaaatcaaacaggcataaacaaact 20343094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 37542988 - 37542937
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||| |||| ||| |||||||||||||||||||| ||||| |||||||    
T  37542988 ttctgatgctcaaccttggacttctgacaaaccaaacaggcataaacaaact 37542937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 25423965 - 25424019
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  25423965 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 25424019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 30138231 - 30138334
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  30138231 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 30138330  T
Q  106 actc 109  Q
    ||||    
T  30138331 actc 30138334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 30147782 - 30147885
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  30147782 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 30147881  T
Q  106 actc 109  Q
    ||||    
T  30147882 actc 30147885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17193514 - 17193623
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  17193514 agatactatcccacttccactctggcacaaacaacatttgcatcaaacccgatggtttctgatgttcaatcttcgacttctgacaaatcaaacaagcata 17193613  T
Q  101 gacaaactct 110  Q
     |||||||||    
T  17193614 aacaaactct 17193623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 16257570 - 16257672
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  16257570 tatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgatcaatcttcgatttctgacaaaccaaacaagcataaacaaa 16257669  T
Q  107 ctc 109  Q
    |||    
T  16257670 ctc 16257672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 13967055 - 13966952
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  13967055 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 13966956  T
Q  106 actc 109  Q
    ||||    
T  13966955 actc 13966952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 16742418 - 16742315
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16742418 ctattccacttccactctggcacaaacaacggttgcatcaaacctgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 16742319  T
Q  106 actc 109  Q
    ||||    
T  16742318 actc 16742315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6712129 - 6712024
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  6712129 agatattatcccacttccactctggcacaaacaacaattgcatcaaacccgacgatttctgatgttcaatcttagacttctgacaaaccaaacaagcata 6712030  T
Q  101 gacaaa 106  Q
     |||||    
T  6712029 aacaaa 6712024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6152571 - 6152463
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| ||||    
T  6152571 agatactatcccacttccactcaagcacaaacaacggttgcatcaaacccgacggtctttgatgttcaatcttcgacttctgacaaactaaacaaacata 6152472  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  6152471 aacaaactc 6152463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 8274114 - 8274011
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||| ||| ||||    
T  8274114 ctatcccacttccactctggcacaaagaatggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaaccaagcaagaataaacaa 8274015  T
Q  106 actc 109  Q
    ||||    
T  8274014 actc 8274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18749085 - 18749190
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||| || ||||||| ||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||| |||    
T  18749085 agatactatctcatttccactctggcaaaaacaacggttgcatcaaaaccgacggtttatgttgttcaatcttcgacttctaacaaaccaaacaagaata 18749184  T
Q  101 gacaaa 106  Q
     |||||    
T  18749185 aacaaa 18749190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 15095434 - 15095534
Alignment:
Q  10 cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 109  Q
    |||||||||||   |||||||||||||||||||||||||||||||  || |||||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  15095434 cccacttccacgcaggcacaaacaacggttgcatcaaacccgacgacttttgatgttcaatcttcgacttttgaaaaaccaaacaagcatacacaaactc 15095533  T
Q  110 t 110  Q
    |    
T  15095534 t 15095534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 267009 - 266907
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    |||||||||||||||  || |||||||| ||||||||||||||| | |  || || |||||||||||||||||||||||||||||||||||||| |||||    
T  267009 tatcccacttccactccggtacaaacaatggttgcatcaaacccaatgacttttggtgttcaatcttcgacttctgacaaaccaaacaagcatacacaaa 266910  T
Q  107 ctc 109  Q
    |||    
T  266909 ctc 266907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 15610554 - 15610632
Alignment:
Q  31 acaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 109  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  15610554 acaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacagactc 15610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 15062207 - 15062261
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  15062207 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 15062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 16371876 - 16371930
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||    
T  16371876 ggtttctgatgttcaatcttcgacttctgacaaactaaacaagaatacacaaact 16371930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 12498711 - 12498763
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||    
T  12498711 ggtttctgatgtttaatcttcgacttctgacaaactaaacaagaatacacaaa 12498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 16491848 - 16491794
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||    
T  16491848 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaact 16491794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 16692627 - 16692681
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16692627 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16692681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 16806593 - 16806539
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  16806593 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 16806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 9523131 - 9523236
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||| ||||||| |||||||   || |||  ||||| ||| |  ||||||||||| ||||  |||||||||||||||| |||||||| ||| |    
T  9523131 atactatcccatttccactctggcacatctaatggtatcatcataccagcaggtttctgatgctcaactttcgacttctgacaaatcaaacaagaataca 9523230  T
Q  103 caaact 108  Q
    ||||||    
T  9523231 caaact 9523236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 11658561 - 11658518
Alignment:
Q  112 atagctctaactaacttgccacataagcatgtaaaactgttatg 155  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||    
T  11658561 atagctctaactaacttgccacataaaaatgtacaactgttatg 11658518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 93
Target Start/End: Complemental strand, 14126261 - 14126222
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaac 93  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  14126261 ggtttctgatgctcaatcttcgacttctgacaaactaaac 14126222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 14876165 - 14876111
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||| |||||||| |||| ||||| | ||| |||||||    
T  14876165 ggtttctgatgttcaatcttcaacttctgataaactaaacaggaatacacaaact 14876111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 15209354 - 15209408
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||| |||||||||||||||| |||||| | ||| |||||||    
T  15209354 ggtttctgatgctcaattttcgacttctgacaaatcaaacaggaatacacaaact 15209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 17490313 - 17490367
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  17490313 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 17490367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 20830940 - 20830837
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  20830940 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 20830841  T
Q  106 actc 109  Q
    ||||    
T  20830840 actc 20830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22135110 - 22135005
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  22135110 agatactatcccacttctactgtggcacaaacaacagttgcatcaaacccgacggttttttatgttcaatcttcaacttctgacaaaccaaacaagcata 22135011  T
Q  101 gacaaa 106  Q
     |||||    
T  22135010 aacaaa 22135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21201842 - 21201751
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaa 92  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||||||||||||| |||||||||| ||||| ||||    
T  21201842 agatactatcccacttccactctggcacaaacaatggttgcatcaaactcgatggcttctgatgttcaattttcgacttctaacaaatcaaa 21201751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 14932121 - 14932074
Alignment:
Q  111 catagctctaactaacttgccacataagcatgtaaaactgttatgaca 158  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  14932121 cataactcgaactaacttgccacataagcatgtacaactgttatgaca 14932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 21749800 - 21749852
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  21749800 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 21749852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 19855116 - 19855215
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||  |||||||  || ||| ||||  || |||||||| |||| ||| ||||||||||||  |||||| ||||| ||||    
T  19855116 ctatcccacttccactctggcacatccaacggtgtcaacaaccccgcaggcttctgatgctcaaccttagacttctgacaagtcaaacatgcatacacaa 19855215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 22361744 - 22361690
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||    
T  22361744 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaact 22361690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 16078155 - 16078102
Alignment:
Q  55 gtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||| |||||||||||||||||||| || ||||| | ||| |||||||    
T  16078155 gtttctgatgctcaatcttcgacttctgacagactaaacaggaatacacaaact 16078102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 180752 - 180854
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  180752 tatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaaa 180851  T
Q  107 ctc 109  Q
    |||    
T  180852 ctc 180854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 14998109 - 14998215
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  14998109 atactatctcacttccactttggcacaaacaacggttgcatccaacccgacggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaa 14998208  T
Q  103 caaactc 109  Q
    |||||||    
T  14998209 caaactc 14998215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 13248438 - 13248544
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| |    
T  13248438 atacaatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatattcaatcttcgatttctgacaaaccaaacaagcataaa 13248537  T
Q  103 caaactc 109  Q
    |||||||    
T  13248538 caaactc 13248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 9291631 - 9291734
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || |||| |||||||||||||||||| ||||    
T  9291631 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttcttacaaaccaaacaagcataaacaa 9291730  T
Q  106 actc 109  Q
    ||||    
T  9291731 actc 9291734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 15292634 - 15292531
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| |||     
T  15292634 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacat 15292535  T
Q  106 actc 109  Q
    ||||    
T  15292534 actc 15292531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38811698 - 38811803
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||| ||||  |||||||||| |||| |||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||    
T  38811698 agatactatcccactttcactcaggcacaaacagcggtcgcatcaaacccagcggcttctgatgttcaatcttcgatttctgacaaaccaaacaagtata 38811797  T
Q  101 gacaaa 106  Q
     |||||    
T  38811798 cacaaa 38811803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 12342345 - 12342247
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||| ||||||||||||||||  |||||||| |||| ||||||||||| ||| |  ||||||||||||||||||||||||||||||| ||||||||||||    
T  12342345 agatgctatcccacttccactccggcacaaaaaacgattgcatcaaactcga-gacttctgatgttcaatcttcgacttctgacaaatcaaacaagcata 12342247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 16028905 - 16029010
Alignment:
Q  4 tactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagac 103  Q
    |||||||| ||||||| |  |||||||| || ||||||| ||||||||||   |||||||||| ||| ||||||||||||||||||||||||||||| |     
T  16028905 tactatcctacttccagtcaggcacaaa-aatggttgcaacaaacccgacaacttctgatgttaaattttcgacttctgacaaaccaaacaagcatacat 16029003  T
Q  104 aaactct 110  Q
    |||||||    
T  16029004 aaactct 16029010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 15147053 - 15147015
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 92  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15147053 ggtttctgatgttcaatcttcgacttctgacaaaccaaa 15147015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 18226614 - 18226560
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  18226614 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 18226560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 15078482 - 15078533
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  15078482 ttctgatgttcaaccttagacttctgacaaatcaaacatgcataaacaaact 15078533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20891773 - 20891880
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||| |||||||||||||  || |||  |||||||  |||||| || |  || |||||||| |||| ||| ||||||||||||| ||| ||||||||    
T  20891773 agatactgtcccacttccactccggtacatccaacggtgtcatcaaccctgtaggcttctgatgctcaaccttggacttctgacaaatcaagcaagcata 20891872  T
Q  101 gacaaact 108  Q
     |||||||    
T  20891873 aacaaact 20891880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 88
Target Start/End: Complemental strand, 16354613 - 16354579
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaac 88  Q
    |||||||||||||||||||||||||| ||||||||    
T  16354613 ggtttctgatgttcaatcttcgacttgtgacaaac 16354579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 12524520 - 12524573
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | ||| ||||||    
T  12524520 ggtttctgatgctcaactttcgacttctgacaaaccaaacaggaatacacaaac 12524573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10116 - 10221
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10116 agatactatcccacttccacactggcacaaacaacggttgcatcaaaccctacggtttctgatgttcaatcttcgatttctgacaaaccaaacaagcata 10215  T
Q  101 gacaaa 106  Q
     |||||    
T  10216 aacaaa 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 473 - 574
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  473 atactatcccacttccactctggcacaaacaacggttgcatcaaactcgacggtctctgatgttcaatcttcgacttttgacaaaccaaacaagcataga 572  T
Q  103 ca 104  Q
    ||    
T  573 ca 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 27745 - 27642
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  27745 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttctgacaaaccaaacaagcataaacaa 27646  T
Q  106 actc 109  Q
    ||||    
T  27645 actc 27642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 46981 - 47084
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46981 ctatcccacttccactcaggcacaaacaacggttgcatgaaacccgacggtctctgatgttcaatcttcgacttctgacaaaccaaacaagcataaacaa 47080  T
Q  106 actc 109  Q
    ||||    
T  47081 actc 47084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 13732 - 13838
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||||||||| |    
T  13732 atactatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgttattcaatcttcgatttctgacaaaccaaacaagcataaa 13831  T
Q  103 caaactc 109  Q
    |||||||    
T  13832 caaactc 13838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 538 - 430
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||    
T  538 agatactatcccactttcactctggcacaaacaagggttgcatcaaacccgacggtttctgatgttcaatcttcgattttttacaaaccaaacaagcata 439  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  438 tacaaactc 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 106049 - 105949
Alignment:
Q  9 tcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  106049 tcccacttccactctggcacaaacaacggttgcatcaaacccgacagtctctgatgttcaatcttcgatttctgacaaaccaaacaagcatatacaaact 105950  T
Q  109 c 109  Q
    |    
T  105949 c 105949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 3985 - 4088
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  3985 ctatcccacttccactctggcacgaacaacggttgcatcaaacctgacggtttctgatgttcaatcttcgacttcggacaaaccagacaagcatatacaa 4084  T
Q  106 actc 109  Q
    ||||    
T  4085 actc 4088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 14219 - 14112
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| || |||| |||||||||||||||||| |    
T  14219 atactatcccacttccactctggcacaaacaacgtttgcatcaaacccgacggtctctgatgttcaatctttgatttctaacaaaccaaacaagcataaa 14120  T
Q  103 caaactct 110  Q
    ||||||||    
T  14119 caaactct 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 6002 - 6105
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  6002 ctatcccacttccactctggaacaaacaacggttgcatcaaacccgacggtctctaatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 6101  T
Q  106 actc 109  Q
    ||||    
T  6102 actc 6105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 9340 - 9237
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  9340 ctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcgatttctaacaaaccaaacaagcataaacaa 9241  T
Q  106 actc 109  Q
    ||||    
T  9240 actc 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 18871 - 18977
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| | | ||| ||||||||||||||||||| ||||||||||||||||||||||| |    
T  18871 atactatcccacttccactctggcacaaacaacggttgcatcaaacacaaaggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaa 18970  T
Q  103 caaactc 109  Q
    |||||||    
T  18971 caaactc 18977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 45324 - 45418
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  45324 ctatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttaaatcttcgatttctgacaaaccaaacaagcata 45418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 15484 - 15585
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||||| |||||    
T  15484 tatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgataaatcttcgatttctgacaaaccaaacaagcataaacaaa 15583  T
Q  107 ct 108  Q
    ||    
T  15584 ct 15585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 44365 - 44408
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacc 49  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  44365 ctatcccacttccactctggcacaaacaacggttgcatcaaacc 44408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 903 - 803
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  903 ctatcccacttccactctggtacaaacaacaattgcatcaaacccgacggtttctgatgttcattcttcgacttctgacaaaccaaacaagcataaacaa 804  T
Q  106 a 106  Q
    |    
T  803 a 803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 318 - 421
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  318 tatcccacttccgttctagcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttccaacaaaccaaacaagcataaacaaa 417  T
Q  107 ctct 110  Q
    ||||    
T  418 ctct 421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 55379 - 55276
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| | ||    
T  55379 ctatcccacttccattctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatcttcaatttctgacaaaccaaacaagcataaaaaa 55280  T
Q  106 actc 109  Q
    ||||    
T  55279 actc 55276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 28803 - 28749
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  28803 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 28749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 3370 - 3472
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||| |||||||||||| |||||    
T  3370 tatcccacttccactctggcacaaacaacggttgcatcaaacccgacggtctctgatgttcaatctttgatttttgacaaagcaaacaagcataaacaaa 3469  T
Q  107 ctc 109  Q
    |||    
T  3470 ctc 3472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7991 - 8096
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  7991 agatattatcccacttccactctggcacaaacaacgattgcatcaaacctgacggtctatgatgttcaatcttcgacttatgacaaaccaaacaagcata 8090  T
Q  101 gacaaa 106  Q
     |||||    
T  8091 aacaaa 8096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 8087 - 8192
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||| || |||||||| |||||||||||    
T  8087 agatactatcccacttccactttggcacaaacaacggttgcatcaaacctaacggtttctgatatttaatcttcgatttttgacaaacaaaacaagcata 8186  T
Q  101 gacaaa 106  Q
     |||||    
T  8187 aacaaa 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 9808 - 9916
Alignment:
Q  1 agatactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcata 100  Q
    ||||| |||| |||||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||    
T  9808 agatattatctcacttccactctggcacaaacaatggttgcatcaaacccgacggttttttatgttcaatcttcgatttctaacaaaccaaacaagcata 9907  T
Q  101 gacaaactc 109  Q
     ||||||||    
T  9908 aacaaactc 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 289 - 392
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||  |||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  289 ctatcccaaatccactctggaacaaacaacggttgcatcaaacccgatggtctctgatgttcaatcttcgatttctgacaaaccaaacaagcataaacaa 388  T
Q  106 actc 109  Q
    ||||    
T  389 actc 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 3423 - 3320
Alignment:
Q  6 ctatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaa 105  Q
    ||||||||||||||||  ||||||||||||||||||||||||| || |||| |||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  3423 ctatcccacttccactccggcacaaacaacggttgcatcaaactcgtcggtctctgattttcaatcttcgatttctgacaaaccaaacaagcataaacaa 3324  T
Q  106 actc 109  Q
    ||||    
T  3323 actc 3320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 109
Target Start/End: Complemental strand, 7283 - 7184
Alignment:
Q  10 cccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 109  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||| ||| |||| ||||||||    
T  7283 cccatttccactttggcacaaacaacggttgcatcaaacccgatggtctttgatgttcaatcttcgatttctgacaaaccaagcaaacataaacaaactc 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 8362 - 8266
Alignment:
Q  13 acttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactc 109  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  8362 acttccactctagcacaaacaacggttgtatcaaacccggcggtttctaatgttcaatctttgacttctgacgaaccaaacaagcataaacaaactc 8266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 26634 - 26733
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||| |||||||||| ||||||| |||||    
T  26634 tatcccacttccattctggcacaaacaacggttgcatcaaacccgatagtctctgatgttcaatcttcgatttcttacaaaccaaataagcataaacaaa 26733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 14967 - 15028
Alignment:
Q  8 atcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaa 69  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  14967 atcccacttccactttggcacaaacaatggttgcatcaaacctgacggtttctgatgttcaa 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 75406 - 75487
Alignment:
Q  27 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||    
T  75406 acaaacaacggttgcatccaacccgatggcttctgatgttcaatcttagacttttgacaaagcaaacaagcatatacaaact 75487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 19477 - 19531
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  19477 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 34901 - 34955
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  34901 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaggaatacacaaact 34955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 196909 - 196855
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  196909 ggtttctgatgctcaatcttcgacttctgacaaaccaaacaagaatacacaaact 196855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 9525 - 9444
Alignment:
Q  27 acaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||| ||| |||||||   ||||| ||||| || |||||||||||||| |||||||||||||||||||| |||||||    
T  9525 acaaacaacagttacatcaaatatgacggcttctgctgctcaatcttcgacttttgacaaaccaaacaagcatacacaaact 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 278261 - 278221
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  278261 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 278221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 39302 - 39211
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||||||||| ||||||| |||||||   || | |  ||||||||| |  ||||||||||||||||||||||||||||||||||| |||||    
T  39302 atactatcccatttccactctggcacatctaaggataccatcaaaccagcgggtttctgatgttcaatcttcgacttctgacaaactaaaca 39211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 3069 - 3123
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  3069 ggtttctgatgttcaatcgtcgacttctgacaaaccaaacaggaatacacaaact 3123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 24373 - 24427
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  24373 ggtttctgatgttcaatcatcgacttctgacaaaccaaacaggaatacacaaact 24427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 181074 - 181128
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||| |||||||||||||||||||||||||| | ||| |||||||    
T  181074 ggtttctgatgttcgatcttcgacttctgacaaaccaaacaggaatacacaaact 181128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 100980 - 100929
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  100980 ttctgatgttcaaccttagacttctgacaaatcaaacacgcatacacaaact 100929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 19433 - 19380
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||||||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  19433 ggtttctgatgctcaatcttcgacttctggcaaatcaaacaagcatacacaaac 19380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 14863 - 14968
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||||||||| |||| ||||||||||| ||||| |||||||||||| |    
T  14863 atactatcccatttccactctggcacatctaacgataccatcataccagcaggtttctgatgctcaaccttcgacttctaacaaatcaaacaagcataca 14962  T
Q  103 caaact 108  Q
    ||||||    
T  14963 caaact 14968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 229918 - 229970
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  229918 ggtttctgatgctcaattttcgacttctgacaaaccaaacaagaatacacaaa 229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 6889 - 6943
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||| ||||||||| ||||||| |||||||| ||| |||||||    
T  6889 ggtttctgatgttcaaccttcgacttatgacaaatcaaacaagaatacacaaact 6943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 3836 - 3782
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  3836 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 3782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 7762 - 7708
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||| |||||||    
T  7762 ggtttctgatgttcaaccttcgacttctaacaaatcaaacaagaatacacaaact 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 3245 - 3203
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaag 96  Q
    ||||||||| ||||| |||||||||||||||||||||||||||    
T  3245 ggtttctgacgttcagtcttcgacttctgacaaaccaaacaag 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 13343 - 13397
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  13343 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 13397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 9471 - 9525
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||    
T  9471 ggtttctgatgctcaatctttgacttctgacaaaccaaacaggaatacacaaact 9525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 33004 - 32950
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||||||| ||| |||||||||||||||| | ||| |||||||    
T  33004 ggtttctgatgctcaatctttgacctctgacaaaccaaacaggaatacacaaact 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 15235 - 15289
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||||||||||||||||||||| ||||| | ||| |||||||    
T  15235 ggtttctgatgctcaatcttcgacttctgacaaactaaacaggaatacacaaact 15289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 63462 - 63408
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||| |||||||||||||||||||||||||||| |||| | ||| |||||||    
T  63462 ggtttcttatgttcaatcttcgacttctgacaaacctaacaggaatacacaaact 63408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 571 - 623
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    ||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||    
T  571 ggtttctgatgctcaaccttcgacttctgacaaatcaaacaagaatacacaaa 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 29820 - 29876
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaactct 110  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| |||||||||    
T  29820 ggtttctgatggtcaaccttcgatttctgacaaatcaaacaagaatacacaaactct 29876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 490 - 439
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||    
T  490 ttctgatgttcaaccttagacttctgacaaatcaaacatgcatatacaaact 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 106
Target Start/End: Original strand, 692 - 791
Alignment:
Q  7 tatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    |||||||||||||||| ||||||  |||||||  || ||| || |  || ||||||||||||| ||| ||||||||||||  |||||| ||||| |||||    
T  692 tatcccacttccacttcggcacatccaacggtgacaacaaccctgcaggcttctgatgttcaaccttagacttctgacaagtcaaacatgcatacacaaa 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 7196 - 7299
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||||| ||||||| |||||||   |||| |  ||||| ||| |  ||||| ||||| |||| ||||||||||||||||| |||||||| ||| |    
T  7196 atactatcccatttccactctggcacatctaacgataccatcataccagcaggtttttgatgctcaaccttcgacttctgacaaatcaaacaagaataca 7295  T
Q  103 caaa 106  Q
    ||||    
T  7296 caaa 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 1498 - 1444
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  1498 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 2342 - 2396
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||| ||||||| |||||||| ||| |||||||    
T  2342 ggtttctgatgctcaaccttcgacttttgacaaatcaaacaagaatacacaaact 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 6924 - 6978
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||| ||||||||||||||||| ||| |||| ||| |||||||    
T  6924 ggtttctgatgctcaaccttcgacttctgacaaatcaagcaagaatacacaaact 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 16530 - 16584
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  16530 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 22742 - 22796
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| |||||||| |||||||||||||| ||||| | ||| |||||||    
T  22742 ggtttctgatgctcaatctttgacttctgacaaactaaacaggaatatacaaact 22796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 88
Target Start/End: Original strand, 25849 - 25883
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaac 88  Q
    |||||||||||||||||||||||||| ||||||||    
T  25849 ggtttctgatgttcaatcttcgacttgtgacaaac 25883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 390631 - 390577
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaact 108  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| |||||||    
T  390631 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaact 390577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 1551 - 1604
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||||||||| ||||  |||||||||||||||| |||||||| ||| ||||||    
T  1551 ggtttctgatgctcaactttcgacttctgacaaatcaaacaagaatacacaaac 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 9794 - 9899
Alignment:
Q  3 atactatcccacttccactttggcacaaacaacggttgcatcaaacccgacggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcataga 102  Q
    ||||||||| | ||||||| |||||||   ||||||  |||||| || |  ||||| ||||| |||| ||| ||||||||||||| |||||||| ||| |    
T  9794 atactatcctatttccactctggcacatctaacggtgtcatcaaccctgcaggtttttgatgctcaacctttgacttctgacaaatcaaacaagaataca 9893  T
Q  103 caaact 108  Q
    ||||||    
T  9894 caaact 9899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 39442 - 39389
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaac 107  Q
    ||||||||||| |||| |||||| |||||||||| |||||||| ||| ||||||    
T  39442 ggtttctgatgctcaaccttcgatttctgacaaatcaaacaagaatacacaaac 39389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 27139 - 27188
Alignment:
Q  57 ttctgatgttcaatcttcgacttctgacaaaccaaacaagcatagacaaa 106  Q
    |||||||| |||| ||| ||||||||||||| |||||||||||| |||||    
T  27139 ttctgatgctcaaccttggacttctgacaaatcaaacaagcataaacaaa 27188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 254 - 214
Alignment:
Q  54 ggtttctgatgttcaatcttcgacttctgacaaaccaaaca 94  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    
T  254 ggtttgtgatgttcaatcttcgatttctgacaaactaaaca 214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University