View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14326_high_4 (Length: 236)
Name: NF14326_high_4
Description: NF14326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14326_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 3637479 - 3637696
Alignment:
| Q |
3 |
atactagtgaatagatattgattattccaaacctactagcaagatcctcagagcactttgcaggtagtgcctgttaatttgtgatacatctgctaactgg |
102 |
Q |
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| T |
3637479 |
atactagtgaatagatattgattattccaaacctactagcaagatcctcagagcactttgcaggtagtgcctgttaatttgtgatacatctgctaactgg |
3637578 |
T |
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| Q |
103 |
cgtcttgaagaagcatatgtgttggttattagttcaacttccattttgtgtttgatacagtcccagtagtcacattgtcaaaggaacatttgacccaaaa |
202 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3637579 |
tgtcttgaagaagcatatgtgttagttattagttcaacttccattttgtgtttgatacagtcccagtagtcacattgtcaaaggaacatttgacccaaaa |
3637678 |
T |
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| Q |
203 |
gctaaagctggtagtgtt |
220 |
Q |
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|||||||||||||||||| |
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| T |
3637679 |
gctaaagctggtagtgtt |
3637696 |
T |
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