View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14327_low_1 (Length: 1005)

Name: NF14327_low_1
Description: NF14327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14327_low_1
NF14327_low_1
[»] chr5 (12 HSPs)
chr5 (273-820)||(29866607-29867151)
chr5 (273-610)||(29846380-29846704)
chr5 (684-820)||(29846821-29846957)
chr5 (26-161)||(29846129-29846265)
chr5 (385-438)||(27488723-27488776)
chr5 (392-446)||(40824079-40824134)
chr5 (588-654)||(40156093-40156159)
chr5 (392-444)||(40693130-40693182)
chr5 (393-444)||(3944990-3945041)
chr5 (392-451)||(35395007-35395065)
chr5 (398-444)||(41863886-41863932)
chr5 (400-429)||(41863143-41863172)
[»] chr2 (9 HSPs)
chr2 (516-663)||(9491566-9491714)
chr2 (392-444)||(40859969-40860021)
chr2 (400-451)||(32217003-32217054)
chr2 (392-444)||(35155936-35155988)
chr2 (392-444)||(35468955-35469007)
chr2 (609-660)||(28646452-28646503)
chr2 (400-451)||(32226306-32226357)
chr2 (387-445)||(33201410-33201468)
chr2 (387-444)||(27171071-27171128)
[»] chr1 (9 HSPs)
chr1 (523-660)||(12685445-12685583)
chr1 (396-448)||(1146648-1146700)
chr1 (404-444)||(12174493-12174533)
chr1 (392-444)||(12294648-12294700)
chr1 (400-451)||(42470278-42470329)
chr1 (398-440)||(33928082-33928124)
chr1 (409-451)||(42561535-42561577)
chr1 (392-442)||(50945866-50945916)
chr1 (387-444)||(8209100-8209157)
[»] chr6 (2 HSPs)
chr6 (543-653)||(32318003-32318114)
chr6 (400-451)||(32570254-32570304)
[»] chr8 (7 HSPs)
chr8 (394-451)||(29283810-29283867)
chr8 (514-660)||(41683172-41683319)
chr8 (397-450)||(11903437-11903490)
chr8 (609-652)||(9067267-9067310)
chr8 (565-660)||(9824858-9824953)
chr8 (407-444)||(34968246-34968283)
chr8 (406-451)||(41372676-41372720)
[»] chr3 (15 HSPs)
chr3 (538-660)||(37743135-37743257)
chr3 (394-444)||(1148941-1148991)
chr3 (386-444)||(8845015-8845073)
chr3 (392-446)||(32797432-32797486)
chr3 (387-444)||(32758171-32758228)
chr3 (399-444)||(34995332-34995377)
chr3 (383-444)||(53995085-53995146)
chr3 (388-444)||(47410326-47410382)
chr3 (397-444)||(51103003-51103050)
chr3 (392-446)||(36643425-36643479)
chr3 (400-442)||(50098306-50098348)
chr3 (545-649)||(11442658-11442759)
chr3 (410-451)||(33091599-33091640)
chr3 (399-444)||(33365301-33365346)
chr3 (402-451)||(35963932-35963981)
[»] chr4 (8 HSPs)
chr4 (530-627)||(27990947-27991047)
chr4 (524-584)||(9021788-9021850)
chr4 (393-444)||(37442681-37442732)
chr4 (383-451)||(7232570-7232638)
chr4 (383-451)||(17616297-17616364)
chr4 (392-444)||(25156444-25156496)
chr4 (392-442)||(42906299-42906349)
chr4 (410-451)||(27376194-27376235)
[»] chr7 (9 HSPs)
chr7 (392-444)||(1441741-1441792)
chr7 (399-451)||(11267216-11267268)
chr7 (392-444)||(19063002-19063054)
chr7 (392-443)||(16840681-16840732)
chr7 (406-449)||(28760682-28760725)
chr7 (401-444)||(45883893-45883936)
chr7 (397-451)||(45883773-45883827)
chr7 (391-444)||(7814390-7814443)
chr7 (382-451)||(32676543-32676612)


Alignment Details
Target: chr5 (Bit Score: 435; Significance: 0; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 273 - 820
Target Start/End: Original strand, 29866607 - 29867151
Alignment:
Q  273 gttctgataggttttgattggttcaacaaaaaggagatgaaaggaaaagaaatgggaggaatttcaattatacacacatacgagcgttcaaacaagcggt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29866607 gttctgataggttttgattggttcaacaaaaaggagatgaaaggaaaagaaatgggaggaatttcaattatacacacatacgagcgttcaaacaagcggt 29866706  T
Q  373 ttccatttgcctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgattacgcattcagacaaatgaaaat 472  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  29866707 ttccatttgtctgtttttatattgtgctaatgcgtgtaaattatgaacaatagtttttaagaaatt--gattttgattacgcatacagacaaatgaaaat 29866804  T
Q  473 tagaaaaatatcactacaaatctgtgagaaagaactaacaaatgttgtgagcaacccaaatatgcaaaacaaaaaagtaatttatatttgttttagaatt 572  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29866805 tagaaaaatatcactacaaatctgtgagaaagaactaacaaatgttgtgagcaacccaaatatgcaaaacaaaaaagtaatttatatttgttttagaatt 29866904  T
Q  573 caattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgttttctacatatattattaatgaaactgaannnnnnnnn 672  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  29866905 caattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgttttctacatatattattaatgaaactgaa-tttttttt 29867003  T
Q  673 nnnnnnggtcatgcatcaatggagttgagtctaagagacggagttcgactctcacaacttcgcgaatcaatgttcaaactatgactgagaaagatattca 772  Q
          | || |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  29867004 taaaaagttcttgcaccaatggagttgagtctaagaaacggagttcgaccctcacaacttcgcgaatcaatgttcaaactatgacggagaacgatattca 29867103  T
Q  773 tattcagtgtctggcatgcctcaaatcaaactacacatatattaattt 820  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||    
T  29867104 tattcagtatctggcatgtctcaaatcaaactacacatatattaattt 29867151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 273 - 610
Target Start/End: Original strand, 29846380 - 29846704
Alignment:
Q  273 gttctgataggttttgattggttcaacaaaaaggagatgaaaggaaaagaaatgggaggaatttcaattatacacacatacgagcgttcaaacaagcggt 372  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  29846380 gttctgataggttttgattggttaaa--aaaaggagatgaaaggaaaaaaaatggaaggaatttcaattatacacacatacgagcgttcaaacaaacggt 29846477  T
Q  373 ttccatttgcctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgattacgcattcagacaaatgaaaat 472  Q
    ||          | |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  29846478 tt----------gtttttatattgtgctgatgtgtataaattatgaacaatagtttttaagaaattttgattttgattacgcatacacacaaatgaaaat 29846567  T
Q  473 tagaaaaatatcactacaaatctgtgagaaagaactaacaaatgttgtgagcaacccaaatatgcaaaacaaaaaagtaatttatatttgttttagaatt 572  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29846568 tagaaaaatatcactacaaatctgtgagaaagaactaacaaatgttgtgagcaacccaaatatgcaaaacaaaaaagtaatttatatttgttttagaatt 29846667  T
Q  573 caattttgctttgcaatttcaagatttaacaatcacta 610  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29846668 caattttgctttgcaattt-aagatttaacaatcacta 29846704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 684 - 820
Target Start/End: Original strand, 29846821 - 29846957
Alignment:
Q  684 tgcatcaatggagttgagtctaagagacggagttcgactctcacaacttcgcgaatcaatgttcaaactatgactgagaaagatattcatattcagtgtc 783  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29846821 tgcatcaatggagttgagtctaagagacggagttcgactctcacaacttcgcgaatcaatgttcaaactatgactgagaacgatattcatattcagtgtc 29846920  T
Q  784 tggcatgcctcaaatcaaactacacatatattaattt 820  Q
    || ||||||||||||||||||||||||||||||||||    
T  29846921 tgacatgcctcaaatcaaactacacatatattaattt 29846957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 29846129 - 29846265
Alignment:
Q  26 gtgacaagttaataagggtttttggtgtggatcgctggaagcaaagaacgttcgtgaatcatctatttccttcttcttcnnnnnnnnnnnnncgtcaaaa 125  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||             ||||||||    
T  29846129 gtgacaagttaataagggtttttggtgtggatcgctgaaagcatagaacgttcgtgaattatctatttccttcttcttcttcttttttttttcgtcaaaa 29846228  T
Q  126 aaa-cttgtttattgtaataatacaaaaaactttttt 161  Q
    ||| ||||||||||||||||||||||||| |||||||    
T  29846229 aaatcttgtttattgtaataatacaaaaatctttttt 29846265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 27488723 - 27488776
Alignment:
Q  385 gcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaatt 438  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||    
T  27488723 gcttttatattgcactaatgcgtgtaaattatgaacaatagtttttatgaaatt 27488776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 40824134 - 40824079
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagt-ttttaagaaattttgatttt 446  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||||||| ||||    
T  40824134 tattgtgctaatgcgtataaattatgaacaattgtgttttatgaaattttgttttt 40824079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 588 - 654
Target Start/End: Complemental strand, 40156159 - 40156093
Alignment:
Q  588 atttcaagatttaacaatcactaaataatgtctatgttaaatattgttttctacatatattattaat 654  Q
    |||||||| ||| ||||||  |||||||||| ||| ||||||||| ||||| |||||||||||||||    
T  40156159 atttcaaggttttacaatcggtaaataatgtttatattaaatattattttcaacatatattattaat 40156093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 40693130 - 40693182
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||| |||||| ||||||||| |||||||| |||||| ||||||||||||    
T  40693130 tattgtgttaatgcatataaattacgaacaatattttttatgaaattttgatt 40693182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 3944990 - 3945041
Alignment:
Q  393 attgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||| ||||||| |||||| ||| ||||||||||||||| ||||||||||||    
T  3944990 attgagctaatgtgtataagttacgaacaatagtttttatgaaattttgatt 3945041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 451
Target Start/End: Original strand, 35395007 - 35395065
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||||  || |||||||||||| ||| |||||| |||||||||||||||||||    
T  35395007 tattgtgctaatttgtgtaaattatgaacgata-tttttatgaaattttgattttgatta 35395065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 444
Target Start/End: Original strand, 41863886 - 41863932
Alignment:
Q  398 gctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||||| ||||||||| |||||||| |||||| ||||||||||||    
T  41863886 gctaatgcttataaattacgaacaataatttttatgaaattttgatt 41863932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 429
Target Start/End: Original strand, 41863143 - 41863172
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttt 429  Q
    ||||||||||||||||||||||||||||||    
T  41863143 taatgcgtataaattatgaacaatagtttt 41863172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 516 - 663
Target Start/End: Complemental strand, 9491714 - 9491566
Alignment:
Q  516 gttgtgagcaacccaaatatgcaaaac-aaaaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaata 614  Q
    |||||| |||||| ||||||||||||  |||||| |||||||||||||| |||||||||||| || |||||  |||||||| ||| | |||   ||||||    
T  9491714 gttgtgtgcaaccaaaatatgcaaaagtaaaaaaataatttatatttgtgttagaattcaatattactttgttatttcaaggttttaaaattggtaaata 9491615  T
Q  615 atgtctatgttaaatattgttttctacatatattattaatgaaactgaa 663  Q
    |||||||  ||||||||| ||||  ||||||||||||||| ||||||||    
T  9491614 atgtctacattaaatattattttaaacatatattattaattaaactgaa 9491566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 40860021 - 40859969
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| |||||||||||||||||| ||||||||||||| | ||||||||||||    
T  40860021 tattgcgctaatgcgtataaattacgaacaatagttttaatgaaattttgatt 40859969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 32217003 - 32217054
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||||||||| ||||||| |||||| | |||||||||||||||||    
T  32217003 taatgcgtataaattataaacaatattttttatgcaattttgattttgatta 32217054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 35155988 - 35155936
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||| |||||||||||||||||||| | || |||||| ||||||||||||    
T  35155988 tattgtgttaatgcgtataaattatgaatattattttttatgaaattttgatt 35155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 35469007 - 35468955
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||||||||||||||||||||||||| ||| |||  | ||||||||||||    
T  35469007 tattgtgctaatgcgtataaattatgaactatattttcaatgaaattttgatt 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 28646452 - 28646503
Alignment:
Q  609 taaataatgtctatgttaaatattgttttctacatatattattaatgaaact 660  Q
    |||||||||| ||| ||||||||| ||||| ||||||||||||||| |||||    
T  28646452 taaataatgtatatattaaatattattttcaacatatattattaattaaact 28646503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 32226306 - 32226357
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||||||||| | ||||| |||||| | |||||||||||||||||    
T  32226306 taatgcgtataaattataagcaatattttttatgcaattttgattttgatta 32226357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 33201468 - 33201410
Alignment:
Q  387 ttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattt 445  Q
    |||| ||||| |||||| | ||||||||| ||||||||||||| | |||||||||||||    
T  33201468 ttttttattgcgctaatacatataaattacgaacaatagttttaatgaaattttgattt 33201410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 27171128 - 27171071
Alignment:
Q  387 ttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||| |||||| ||||| ||||||||||| ||||| ||||||| | ||||||||||||    
T  27171128 ttttttattgtactaatacgtataaattacgaacattagttttcatgaaattttgatt 27171071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 1e-19; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 523 - 660
Target Start/End: Original strand, 12685445 - 12685583
Alignment:
Q  523 gcaacccaaatatgcaaaac-aaaaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaataatgtcta 621  Q
    |||||| ||||||||||||  ||||||  ||||||||||||| ||| ||||||||||| |||||| |||||||  |||||||||   |||||||||||||    
T  12685445 gcaaccaaaatatgcaaaattaaaaaaacaatttatatttgtgttacaattcaattttactttgctatttcaatgtttaacaattcataaataatgtcta 12685544  T
Q  622 tgttaaatattgttttctacatatattattaatgaaact 660  Q
    | ||||| ||| || || | ||||||||||||| |||||    
T  12685545 tattaaacattattctcaatatatattattaattaaact 12685583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 1146700 - 1146648
Alignment:
Q  396 gtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttga 448  Q
    ||||||||||||||||||||  ||| ||||||||||  |||||||||||||||    
T  1146700 gtgctaatgcgtataaattaccaacgatagtttttataaaattttgattttga 1146648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 404 - 444
Target Start/End: Original strand, 12174493 - 12174533
Alignment:
Q  404 gcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  12174493 gcgtataaattatgaacaatagtttttatcaaattttgatt 12174533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 12294700 - 12294648
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| || ||||||||||||||||||||  ||||||||| ||||||||||||    
T  12294700 tattgcgcaaatgcgtataaattatgaacggtagtttttatgaaattttgatt 12294648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 42470278 - 42470329
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||| |||||||  ||||||| |||||| |||||||||||||||||||    
T  42470278 taatgcgtttaaattacaaacaataatttttatgaaattttgattttgatta 42470329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 33928082 - 33928124
Alignment:
Q  398 gctaatgcgtataaattatgaacaatagtttttaagaaatttt 440  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||    
T  33928082 gctaatacgtataaattatgaacaattgtttttatgaaatttt 33928124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 409 - 451
Target Start/End: Original strand, 42561535 - 42561577
Alignment:
Q  409 taaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||||||||||  |||||| |||||||||||||||||||    
T  42561535 taaattatgaacaatgttttttatgaaattttgattttgatta 42561577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 50945916 - 50945866
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttga 442  Q
    ||||||| |||||||||||| ||| |||||||||||||||  |||||||||    
T  50945916 tattgtgttaatgcgtataacttaagaacaatagtttttataaaattttga 50945866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 8209100 - 8209157
Alignment:
Q  387 ttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||| ||||||| ||| || |||||||||| || |||| |||||||||||||||||||    
T  8209100 ttttttattgtgataacgcatataaattatcaataataatttttaagaaattttgatt 8209157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 543 - 653
Target Start/End: Original strand, 32318003 - 32318114
Alignment:
Q  543 aaaaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgt-tttctac 641  Q
    |||||||||||||||||||||||||||||||||| || |||||| |||||||| ||||||  |   |||||||||||||| ||||| ||| | |||  ||    
T  32318003 aaaaaagtaatttatatttgttttagaattcaatattactttgctatttcaagttttaacggttgataaataatgtctatattaaaaattatatttggac 32318102  T
Q  642 atatattattaa 653  Q
    ||||||||||||    
T  32318103 atatattattaa 32318114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 451
Target Start/End: Original strand, 32570254 - 32570304
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||| |||||    
T  32570254 taatgcgtataaattacgaaca-tagtttttatgaaattttgatttagatta 32570304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 1e-16; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 29283810 - 29283867
Alignment:
Q  394 ttgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  29283810 ttgtgctaatgcttataaattatgaactatagtttttatgaaattttgattttgatta 29283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 514 - 660
Target Start/End: Original strand, 41683172 - 41683319
Alignment:
Q  514 atgttgtgagcaacccaaatatgcaaaac-aaaaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaa 612  Q
    |||||||| |||||| | ||||||||||  ||||||||||||| |||  || |||||||||||| || |  | | |||||||| ||||||  | | ||||    
T  41683172 atgttgtgtgcaaccaacatatgcaaaagtaaaaaagtaatttttatccgtgttagaattcaatattacggttctatttcaaggtttaacttttagtaaa 41683271  T
Q  613 taatgtctatgttaaatattgttttctacatatattattaatgaaact 660  Q
    |||||||||| ||||||||| ||||| ||| ||||||||||| |||||    
T  41683272 taatgtctatattaaatattattttcaacaaatattattaattaaact 41683319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 11903490 - 11903437
Alignment:
Q  397 tgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatt 450  Q
    |||||||||||||||||||||||||| ||||||   ||||||||||||||||||    
T  11903490 tgctaatgcgtataaattatgaacaaaagttttcgtgaaattttgattttgatt 11903437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 652
Target Start/End: Original strand, 9067267 - 9067310
Alignment:
Q  609 taaataatgtctatgttaaatattgttttctacatatattatta 652  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||    
T  9067267 taaataatatctatattaaatattgttttcaacatatattatta 9067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 660
Target Start/End: Complemental strand, 9824953 - 9824858
Alignment:
Q  565 ttagaattcaattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgttttctacatatattattaatgaaact 660  Q
    |||||||||| |||  |||||  |||| ||| |||||||||   ||||||||||| || || |||||| ||||| ||||||||||||||| |||||    
T  9824953 ttagaattcagtttaactttgttattttaaggtttaacaattggtaaataatgtcaatatttaatattattttcaacatatattattaattaaact 9824858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 407 - 444
Target Start/End: Original strand, 34968246 - 34968283
Alignment:
Q  407 tataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  34968246 tataaattatatacaatagtttttaagaaattttgatt 34968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 406 - 451
Target Start/End: Complemental strand, 41372720 - 41372676
Alignment:
Q  406 gtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||||||||||||||| || | |||||||||||||||||    
T  41372720 gtataaattatgaacaatagtttatatg-aattttgattttgatta 41372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 538 - 660
Target Start/End: Original strand, 37743135 - 37743257
Alignment:
Q  538 aaaacaaaaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgtttt 637  Q
    |||| ||||| ||||| ||||||||| |||||||||||| ||  ||||| |||||||| ||||| |||   | |||||||||||| |||||| || ||||    
T  37743135 aaaataaaaaggtaatatatatttgtcttagaattcaatattagtttgctatttcaaggtttaataattgattaataatgtctatattaaatgttatttt 37743234  T
Q  638 ctacatatattattaatgaaact 660  Q
      ||||||||||| ||| |||||    
T  37743235 tgacatatattataaattaaact 37743257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 1148991 - 1148941
Alignment:
Q  394 ttgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||||||||||    
T  1148991 ttgtgttaatgcgtataaatcacgaacaatagtttttatgaaattttgatt 1148941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 8845015 - 8845073
Alignment:
Q  386 cttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| |||||  ||||||| |||||||||||||| |||||||||| ||||||||||||    
T  8845015 cttttttattgcactaatgcatataaattatgaacgatagtttttatgaaattttgatt 8845073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 392 - 446
Target Start/End: Complemental strand, 32797486 - 32797432
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatttt 446  Q
    ||||||||||||| |||||||||| |||||||| |||||| |||||||| |||||    
T  32797486 tattgtgctaatgtgtataaattacgaacaataatttttatgaaattttaatttt 32797432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 32758171 - 32758228
Alignment:
Q  387 ttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||| ||||| |||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  32758171 ttttttattgcgctaatgcatataaattataaacaatattttttatgaaattttgatt 32758228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 34995332 - 34995377
Alignment:
Q  399 ctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||| |||||||||||||||||||| ||||| ||||||||||||    
T  34995332 ctaatgggtataaattatgaacaatagcttttatgaaattttgatt 34995377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 53995085 - 53995146
Alignment:
Q  383 ctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| || ||||| ||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  53995085 ctgctcttctattgcgctaatgcgtataaattacaaacagtagtttttatgaaattttgatt 53995146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 388 - 444
Target Start/End: Original strand, 47410326 - 47410382
Alignment:
Q  388 tttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||||| | ||||| |||||||||| |||||||| |||||| ||||||||||||    
T  47410326 tttatattgcgttaatgtgtataaattacgaacaataatttttatgaaattttgatt 47410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 444
Target Start/End: Original strand, 51103003 - 51103050
Alignment:
Q  397 tgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||||| ||||||||||||||||||| ||||||  |||||||||||    
T  51103003 tgctaatgtgtataaattatgaacaataatttttataaaattttgatt 51103050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 446
Target Start/End: Original strand, 36643425 - 36643479
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatttt 446  Q
    |||||||||||| |||||||||||  || |||| |||||| ||||||||||||||    
T  36643425 tattgtgctaattcgtataaattaataataatattttttatgaaattttgatttt 36643479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 50098306 - 50098348
Alignment:
Q  400 taatgcgtataaattatgaacaatagtttttaagaaattttga 442  Q
    ||||||||||||||||| ||||||||||| || ||||||||||    
T  50098306 taatgcgtataaattataaacaatagtttatatgaaattttga 50098348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 649
Target Start/End: Complemental strand, 11442759 - 11442658
Alignment:
Q  545 aaaagtaatttatatttgttttagaattcaattttgctttgcaatttcaagatttaacaatcactaaataatgtctatgttaaatattgttttctacata 644  Q
    |||| |||||||||||||||| ||| |||||| ||  ||||  |||| ||||| ||| ||| | ||||||||||||||  |||||||| ||||| |||||    
T  11442759 aaaaataatttatatttgtttcagagttcaatattattttg--attttaagatctaataat-agtaaataatgtctatactaaatattattttcaacata 11442663  T
Q  645 tatta 649  Q
    |||||    
T  11442662 tatta 11442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 410 - 451
Target Start/End: Complemental strand, 33091640 - 33091599
Alignment:
Q  410 aaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||||||  ||||||||||||||| ||||||||||    
T  33091640 aaattatgaacaatgttttttaagaaattttaattttgatta 33091599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 33365301 - 33365346
Alignment:
Q  399 ctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  33365301 ctaatgcttataaattacgaacattagtttttatgaaattttgatt 33365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 35963981 - 35963932
Alignment:
Q  402 atgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||| ||||||||| ||| ||||||||| | |||||||||||||||||||    
T  35963981 atgcatataaattacgaataatagttttaatgaaattttgattttgatta 35963932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 530 - 627
Target Start/End: Complemental strand, 27991047 - 27990947
Alignment:
Q  530 aaatatgcaaaac-aaaaaagtaatttatatttgttttagaattca--attttgctttgcaatttcaagatttaacaatcactaaataatgtctatgtta 626  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||  ||| | ||| || |||||||| ||||| ||| | |||||||||||||| |||    
T  27991047 aaatatgcaaaagtaaaaaagtaatttatatttgtgttagaattcaatattatacttggctatttcaaggtttaagaataagtaaataatgtctatatta 27990948  T
Q  627 a 627  Q
    |    
T  27990947 a 27990947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 524 - 584
Target Start/End: Original strand, 9021788 - 9021850
Alignment:
Q  524 caacccaaatatgcaaaac--aaaaaagtaatttatatttgttttagaattcaattttgcttt 584  Q
    ||||| ||||||||||||   ||||||||||||||||||||| |||||||||||| |||||||    
T  9021788 caaccaaaatatgcaaaagtaaaaaaagtaatttatatttgtgttagaattcaatattgcttt 9021850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 37442681 - 37442732
Alignment:
Q  393 attgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||||    
T  37442681 attgtgctaatgcgtataaattttgaacaataatttttctgaaattttgatt 37442732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 383 - 451
Target Start/End: Complemental strand, 7232638 - 7232570
Alignment:
Q  383 ctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||| ||||| | |||||||||||||||||||||  ||||||||  ||||||| ||||| |||||    
T  7232638 ctgcttttttattgcggtaatgcgtataaattatgaacggtagtttttgtgaaatttagatttagatta 7232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 17616297 - 17616364
Alignment:
Q  383 ctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||||| |||||| |||||||||||| ||||||||  ||| ||||  ||||||||||||||||||||    
T  17616297 ctgcttttttattgtcctaatgcgtatatattatgaaagata-ttttatagaaattttgattttgatta 17616364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 25156444 - 25156496
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||| ||||||||| |||||||||||||||||||||||||   ||||||||||    
T  25156444 tattatgctaatgcatataaattatgaacaatagtttttatagaattttgatt 25156496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 42906299 - 42906349
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttga 442  Q
    ||||| |||||||| |||||||||  |||||||||||||| ||||||||||    
T  42906299 tattgcgctaatgcatataaattacaaacaatagtttttatgaaattttga 42906349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 410 - 451
Target Start/End: Original strand, 27376194 - 27376235
Alignment:
Q  410 aaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||| ||| |||||| |||||||||||||||||||    
T  27376194 aaattatgaacgatattttttatgaaattttgattttgatta 27376235  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000006; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 1441792 - 1441741
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  1441792 tattgcgctaatgcgtataaattacgaacaatag-ttttatgaaattttgatt 1441741  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 11267216 - 11267268
Alignment:
Q  399 ctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    ||||||||||| ||||||||| ||||||||||  ||||||| |||||||||||    
T  11267216 ctaatgcgtatgaattatgaagaatagtttttgtgaaatttagattttgatta 11267268  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 19063054 - 19063002
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||||||||||| ||||||||||||| | || |||||| ||||||||||||    
T  19063054 tattgtgctaatgcatataaattatgaagagtaatttttatgaaattttgatt 19063002  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 16840732 - 16840681
Alignment:
Q  392 tattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgat 443  Q
    ||||| ||||||  |||||||||| ||||||||||||||| |||||||||||    
T  16840732 tattgcgctaatatgtataaattacgaacaatagtttttatgaaattttgat 16840681  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 449
Target Start/End: Complemental strand, 28760725 - 28760682
Alignment:
Q  406 gtataaattatgaacaatagtttttaagaaattttgattttgat 449  Q
    ||||||||||||||| |||||||||| | |||||||||||||||    
T  28760725 gtataaattatgaacgatagtttttatgcaattttgattttgat 28760682  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 45883893 - 45883936
Alignment:
Q  401 aatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    ||||||||||||| |||||||||| |||||| ||||||||||||    
T  45883893 aatgcgtataaatcatgaacaatattttttatgaaattttgatt 45883936  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 45883773 - 45883827
Alignment:
Q  397 tgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||||| | |||||||||||||||| ||||||||| | |||||||||||| ||||    
T  45883773 tgctaaagtgtataaattatgaacagtagtttttatgcaattttgatttttatta 45883827  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 391 - 444
Target Start/End: Complemental strand, 7814443 - 7814390
Alignment:
Q  391 atattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgatt 444  Q
    |||||| | |||||||||||||| |||||||||| | |||| ||||||||||||    
T  7814443 atattgcggtaatgcgtataaatcatgaacaataatatttatgaaattttgatt 7814390  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 382 - 451
Target Start/End: Complemental strand, 32676612 - 32676543
Alignment:
Q  382 cctgcttttatattgtgctaatgcgtataaattatgaacaatagtttttaagaaattttgattttgatta 451  Q
    |||| |||||||||||| |||||  ||||||||||||| | || | ||||  ||||||||||||||||||    
T  32676612 cctgtttttatattgtgttaatgtatataaattatgaatagtaatatttataaaattttgattttgatta 32676543  T

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