View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14327_low_23 (Length: 246)
Name: NF14327_low_23
Description: NF14327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14327_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 7076800 - 7077030
Alignment:
| Q |
1 |
atcttctagaccaaattgtgccttagcaattcaagcattgtgctctttgcactttactttggataaagccaagtcagttatcaaaatctgttctggctcc |
100 |
Q |
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| T |
7076800 |
atcttctagaccaaattgtgccttagcaattcaagcattgtgctctttgcactttactttggataaagccaagtcagttatcaaaatctgttctggctcc |
7076899 |
T |
|
| Q |
101 |
agtaaactctacctggtaactcaattttatatgcaaagttatctgcatgctataatttaacttatagttgtttcttcttttgatactttcaaatactaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7076900 |
agtaaactctacctggtaactcaattttatatgcaaagttatctgcatgctataatttaacttatagttgtttcttcttttgatactttcaaatactaat |
7076999 |
T |
|
| Q |
201 |
ttgtaagcaactcttataagacacaatattt |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
7077000 |
ttgtaagcaactcttataagacacaatattt |
7077030 |
T |
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