View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14328_high_15 (Length: 329)
Name: NF14328_high_15
Description: NF14328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14328_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 322
Target Start/End: Complemental strand, 35410829 - 35410508
Alignment:
| Q |
1 |
tgatcgggttaatgctcttgatgagcgcaaagcttatgcaacaaccacaattttcttcctcaccaaaatcggaactctgaagcccattgcaattcagctt |
100 |
Q |
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| T |
35410829 |
tgatcgggttaatgctcttgatgagcgcaaagcttatgcaacaaccacaattttcttcctcaccaaaatcggaactctgaagcccattgcaattcagctt |
35410730 |
T |
|
| Q |
101 |
gctctcccaacagacaagcaggttctaacccctgctgtagatgaaacctctaaatggctctggcaattaggcaaagctcacgtttgcgctaatgatgctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35410729 |
gctctcccaacagacaagcaggttctaacccctgctgtagatgaaacctctaaatggctctggcaattaggcaaagctcacgtttgcgctaatgatgctg |
35410630 |
T |
|
| Q |
201 |
gcgttcatacacttgtgcaccattggtatgaattactatttccatgcaaatatatgtatttgagaaaaacttgaccaaaacttttgttttagaaatttag |
300 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
35410629 |
gcgttcatacacttgtgcaccattggtatgaattattatttccatgcaaatatatgtatttgagaaaaacttgcccaaaacttttgttttagaaatttag |
35410530 |
T |
|
| Q |
301 |
taatgacatttgacctatgata |
322 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
35410529 |
taatgacatttgacctatgata |
35410508 |
T |
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