View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14328_high_19 (Length: 304)
Name: NF14328_high_19
Description: NF14328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14328_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 14 - 287
Target Start/End: Complemental strand, 40878213 - 40877940
Alignment:
| Q |
14 |
catagggatcaatgacataactaactcacagtcacagacatattgtataaagtcaaaatttcagaaacaacaacgtactagtacccgatttgtgtaatgc |
113 |
Q |
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| T |
40878213 |
catagggatcaatgacataactaactcacagtcacagacatattgtataaagtcaaaatttcagaaacaacaacgtactagtacccgatttgtgtaatgc |
40878114 |
T |
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| Q |
114 |
caaaatgtccaaataaatactactagtactaacaccattataaaaatgttactaatacgttgaatttctttggttagttcttgccttcttcgtactaact |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40878113 |
caaaatgtccaaataaatactactagtactaacaccattataaaaatgttactaatacgttgaatttctttggttagttcttgccttcttcgtactaact |
40878014 |
T |
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| Q |
214 |
gcgacatgctgaatcacccaaatgtaatacttcaacgtttacgtaatttccagcagatatgtcagtagtacctt |
287 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40878013 |
gcgacatgctgaatcacccaaacgtaatacttcaacgtttacgtaatttccagcagatatgtcagtagtacctt |
40877940 |
T |
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