View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14328_high_22 (Length: 242)
Name: NF14328_high_22
Description: NF14328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14328_high_22 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 1608672 - 1608431
Alignment:
| Q |
1 |
ttccaatgcataaaggttcaacattttagctcattttgcttatgatagtttgcgatgattcaaattaaattctagggtaaagggcttatgtggtttagtt |
100 |
Q |
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| T |
1608672 |
ttccaatgcataaaggttcaacattttagctcattttgcttatgatagtttgtgatgattcaaattaaattctagggtaaagggcttatgtggtttagtt |
1608573 |
T |
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| Q |
101 |
gatttagacatgtatgtttgtcacaaatgtattttctttactactcaagattggagtttgatgaagtcagaaagaatatatctgtgcaaaatttgatatt |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1608572 |
gatttaggcatgtatgtttgtcacaaatgtattttctttactactcaaaattggagtttgatgaagtcagaaagaatatatctgtgcaaaatttgatatt |
1608473 |
T |
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| Q |
201 |
ttgttgcaaaaatgttaaacttctcctgttctttgcattgac |
242 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||| |
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| T |
1608472 |
ttgttgcaaaaaagttaaacttctcctgttctttgcattgac |
1608431 |
T |
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