View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14328_high_7 (Length: 488)
Name: NF14328_high_7
Description: NF14328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14328_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 437; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 18 - 478
Target Start/End: Original strand, 49300939 - 49301399
Alignment:
| Q |
18 |
aacagaataccttgttgtacataaccgttggaaatttactgaagattcaaaaccaattttaatgaattaaccgaagttttatttttactaccatctacca |
117 |
Q |
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| T |
49300939 |
aacagaataccttgttgtacataaccattggaaatttactgaagattcaaaaccaattttaatgaattaaccgaagttttatttttactaccatctacca |
49301038 |
T |
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| Q |
118 |
agtatcataatttatcatggcataaataacataataactagtacacacttaacatgtgacaggggagaggtacttgaaattgacacatgggttggagcat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49301039 |
agtatcataatttatcatggcataaataacataataacaagtacagacttaacatgtgacaggggagaggtacttgaaattgacacatgggttggagcat |
49301138 |
T |
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| Q |
218 |
cgggaaagaatggtatgcgacgagactggctcataaggagtcaagccacgggccaaatttttgctcgtgcaacaaggtattgtatacatatatactacct |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
49301139 |
cgggaaagaatggtatgcgacgagactggctcataaggagtcaagccacgggccatatttttgctcgtgcaacaaggtattgtatacatatataatacct |
49301238 |
T |
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| Q |
318 |
atgtccctttttataagcacttttttgttctcgcaaaaatgtacttgcaaaaaaggacagaggtaatactagtctagcacaatttcgcaaacattcttta |
417 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49301239 |
atgtccctttttataagcacctttttgttctcgcaaaaatgtacttgcaaaaaaggacagaggtaatactagtctagcacaatttcgcaaacattcttta |
49301338 |
T |
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| Q |
418 |
aacccttttcataagtattttgactgatattgacacataaaacagcacatgggtgatgatg |
478 |
Q |
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| T |
49301339 |
aacccttttcataagtattttgactgatattgacacataaaacagcacatgggtgatgatg |
49301399 |
T |
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