View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14328_low_13 (Length: 333)
Name: NF14328_low_13
Description: NF14328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14328_low_13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 11 - 333
Target Start/End: Complemental strand, 8438196 - 8437874
Alignment:
| Q |
11 |
cagagaaaacaaaagaactctgtaaaagagaaaaggttgataaagtaccacacttcactttctacaagagcaaagaaaaaattcatgaagaagaagctat |
110 |
Q |
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| T |
8438196 |
cagagaaaacaaaagaactctgtaaaagagaaaaggttgataaagtaccacacttcactttctacaagagcaaagaaaaaattcatgaagaagaagctat |
8438097 |
T |
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| Q |
111 |
tggtccagatatgcttgttggtgatgtgttatactacggtgataaccattcaggtgtagtgcaacttcacaacagagaagatgttgagaaacttattgag |
210 |
Q |
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| T |
8438096 |
tggtccagatatgcttgttggtgatgttttatactacggtgataaccattcaggtgtagtgcaacttcacaacagagaagatgttgagaaacttattgag |
8437997 |
T |
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| Q |
211 |
gatcataagattgatcataagcttattgttcttgatgttggtcttaaacattgtgggccatgtgttaaggtttatccgacagtgattaagttgtcgagac |
310 |
Q |
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| T |
8437996 |
gatcataagattgatcataagcttattgttcttgatgttggtcttaaacattgtgggccatgtgttaaggtttatccgacagtgattaagttgtcgagac |
8437897 |
T |
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| Q |
311 |
aaatgaatgatactgttattttt |
333 |
Q |
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| T |
8437896 |
aaatgaatgatactgttattttt |
8437874 |
T |
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