View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14329_high_4 (Length: 516)
Name: NF14329_high_4
Description: NF14329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14329_high_4 |
 | |
|
| [»] scaffold0811 (1 HSPs) |
| | |
|
| [»] scaffold0153 (1 HSPs) |
| | |
|
| [»] scaffold0535 (1 HSPs) |
| | |
|
| [»] scaffold0206 (1 HSPs) |
| | |
|
| [»] scaffold0186 (1 HSPs) |
| | |
|
| [»] scaffold0482 (1 HSPs) |
| | |
|
| [»] scaffold0053 (2 HSPs) |
| | |
|
| [»] scaffold0764 (1 HSPs) |
| | |
|
| [»] scaffold0313 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 421; Significance: 0; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 16 - 501
Target Start/End: Complemental strand, 15491324 - 15490836
Alignment:
| Q |
16 |
gatggggagatatatgtattatgggagagaaaaatctaaaatggatttaattaacgaagaatgtta-gaattaaccttctacatatgttgaagggg-gtt |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
15491324 |
gatggggagatatatgtattatgggagagaaaaatctaaaatggatttaattaacaaagaatgttaagaattaaccttctacatatgttgaaggggagtt |
15491225 |
T |
|
| Q |
114 |
tacttagtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatcataaaa |
213 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
15491224 |
tatttggtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatatccatgaatattcttacatttattattatatccatcataaaa |
15491125 |
T |
|
| Q |
214 |
cttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatgga |
313 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
15491124 |
cttaagatttattcaaaatgtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaatctcgtgga |
15491025 |
T |
|
| Q |
314 |
a-aaatgataaattttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccaccc |
412 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15491024 |
ataaatgataaattttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaagaataggaatcacataagtggataagctagaagccaccc |
15490925 |
T |
|
| Q |
413 |
acatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
15490924 |
acatcaataagtgcattatatctactcaacaatgaaagaatgaacatatcatcaattgaaacaacaatatcaaatccccataaagattc |
15490836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 13 - 501
Target Start/End: Original strand, 41206619 - 41207102
Alignment:
| Q |
13 |
taggatggggagatatatgtattatgggagagaaaaatctaaaatggatttaattaacgaagaatgtta-gaattaaccttctacatatgttgaaggggg |
111 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||| | |||||||||| | |
|
|
| T |
41206619 |
taggatggggagacatatgtattatgggatagaaaaatctaaaatggatttaattaatgaagaatgtaatgaattaaccttttgcatatgttga-----g |
41206713 |
T |
|
| Q |
112 |
tttacttagtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatcataa |
211 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
41206714 |
ttaact-agtttaataagaattaaactcttgtatgtgtttaggg-gagtttaattccataaacatgaacattcttacatttgttattgtatccatcataa |
41206811 |
T |
|
| Q |
212 |
aacttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatg |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | | |||||| ||||||||| || || |
|
|
| T |
41206812 |
aacttaagatttattcaaaaggtttgtcatcatcaaaaagggggagattgttgaagcaaaaatctttttgataaatgttttaatgataacaaacctcgtg |
41206911 |
T |
|
| Q |
312 |
gaa-aaatgataaattttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccac |
410 |
Q |
| |
|
||| |||| |||| |||||||||||| | || ||||| | |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |
|
|
| T |
41206912 |
gaataaataataagttttatgaatggtaatctactgatggttgcacttgagtttttgttaaaagaacaggaatcacataagtggatgagcttgaagccac |
41207011 |
T |
|
| Q |
411 |
ccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||| |||||||||||| |
|
|
| T |
41207012 |
tcacgtcaataagtgcattatatctactcaacaatgaaagaatgagtttatcatcagttgaaacaccaatatcatatctccatgaagattc |
41207102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 259 - 501
Target Start/End: Original strand, 49331743 - 49331986
Alignment:
| Q |
259 |
ttgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcact |
357 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||| ||||||||| | ||||| ||||||||| ||||||||||| || || ||||||| ||||| |
|
|
| T |
49331743 |
ttgttgaagcaaaaatctttttgatgaatgttttaatgataacaaaccttgtggaataaatgataagttttatgaatgttgatctactgatgtttgcact |
49331842 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
49331843 |
tgagtttttgttaaaagaacaggaatcacataagtggataagctagaagccacccacattgataagtgcactatatctacttaacaatgaaagaatgagt |
49331942 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
49331943 |
atatcatcagttgaaacaacaagatcatatctccatgaagattc |
49331986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 260 - 501
Target Start/End: Complemental strand, 13405325 - 13405084
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
|||||||| || ||| ||||| |||| |||||||| ||||||||| || ||||| ||||||||| |||||||||||| || || ||||| | | |||| |
|
|
| T |
13405325 |
tgttgaagaaataatcatttttatgaatattttaatgataacaaacctcgtggaacaaatgataagttttatgaatggtgatctagtgatgcttgaactt |
13405226 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| | |
|
|
| T |
13405225 |
gagtttttgttaaaagaacatgaatcacataagtggataagctagaagccactcacatcaataagtgcattatatctactcaacactgaaagaatgagta |
13405126 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||| | ||| ||||||||||||||||| ||||||| |||| |
|
|
| T |
13405125 |
catcataagttg-aacaacaatatcaaatctccatgaaaattc |
13405084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 260 - 501
Target Start/End: Complemental strand, 18063864 - 18063622
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||| ||||||||| | ||||| ||||||||| ||||||||||| || || ||||||| |||||| |
|
|
| T |
18063864 |
tgttgaagcaaaaatctttttgatgaatgttttaatgataacaaaccttgtggaataaatgataagttttatgaatgttgatctactgatgtttgcactt |
18063765 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||| || | |
|
|
| T |
18063764 |
gagtttttgttaaaagaacaggaatcacataagtggatatgctagaagtcacccacattgataagtgcattatatctactcaacaataaaagaattagta |
18063665 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|| ||||| ||||||||||||||| | ||| |||||||||||| |
|
|
| T |
18063664 |
taccatcagttgaaacaacaatattatatctccatgaagattc |
18063622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 258 - 501
Target Start/End: Complemental strand, 25825111 - 25824867
Alignment:
| Q |
258 |
attgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcac |
356 |
Q |
| |
|
|||||||||| ||||| ||||||||| | ||||| ||||||||| | ||||| ||||||||| |||||||||| || || ||||||| |||| |
|
|
| T |
25825111 |
attgttgaagaaaaaaactttttgatgaatggtttaatgataacaaaccttgtggaataaatgataagttttatgaatattgatctactgatgtttgcac |
25825012 |
T |
|
| Q |
357 |
ttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgag |
456 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25825011 |
ttgagtttttgttaaaagaacatgaatcacataagtggataagctagaagccacccatattgataagtgcattatatctactcaacaatgaaagaatgag |
25824912 |
T |
|
| Q |
457 |
catatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| | ||||||||| |||| ||| |||||||||||| |
|
|
| T |
25824911 |
tatatcatcagctaaaacaacaagatcatatctccatgaagattc |
25824867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 123 - 266
Target Start/End: Complemental strand, 35756950 - 35756806
Alignment:
| Q |
123 |
tgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatc-ataaaacttaagat |
221 |
Q |
| |
|
||||||||||||||||| | || |||||||||| ||| |||||| |||| |||||||||||||||||| |||||||| |||| ||||||||||||| |
|
|
| T |
35756950 |
tgataagaattaaactcctgcacgtgtttagggggagcttaatttcatacctatgaacattcttacattttttattatacacatctataaaacttaagac |
35756851 |
T |
|
| Q |
222 |
ttattcaaaaggtttgtcatcataaaaaatggggagattgttgaa |
266 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
35756850 |
ttattcaaaaggtttgtcatcatcaaaaggggggagattgttgaa |
35756806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 10751657 - 10751618
Alignment:
| Q |
233 |
gtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
10751657 |
gtttgtcatcataaaaaatggggggattgttgaaacaaaa |
10751618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 1975475 - 1975434
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
1975475 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
1975434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 1982841 - 1982800
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
1982841 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
1982800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 268 - 501
Target Start/End: Complemental strand, 12697774 - 12697540
Alignment:
| Q |
268 |
caaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcacttgagttttt |
366 |
Q |
| |
|
||||||| ||||| ||| | |||||| ||||||||| || ||||| ||||||||| ||||||||||||||| || |||||||| ||||||||||||| |
|
|
| T |
12697774 |
caaaaatatttttgttgaatgttttaatgataacaaacctcgtggaataaatgataagttttatgaatggcgatctattgatgttttcacttgagttttt |
12697675 |
T |
|
| Q |
367 |
gttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatca |
466 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12697674 |
gttaaaagaacaggaattacataagtggataagctagaagccacccacattgataagtgcattatatctactcaacaatgaaagaatgagtgtatcatca |
12697575 |
T |
|
| Q |
467 |
attgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||| |
|
|
| T |
12697574 |
gttgaaacaacaatatcatatctccatgaagattc |
12697540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 260 - 501
Target Start/End: Complemental strand, 15990407 - 15990164
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaa-ctgttgatgttggcact |
357 |
Q |
| |
|
|||||||| |||||| ||||||||| | |||||| ||||| ||| || ||||| |||| |||| |||||||||| | || || ||||| | ||||| |
|
|
| T |
15990407 |
tgttgaagtaaaaatctttttgatgaatgttttaatgataagaaacctcgtggaataaataataagttttatgaattggtaatctactgatggttgcact |
15990308 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||||||||| || | |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15990307 |
tgagtttttgttaaaagaacaggaatcacataagtggatgagctagaagctactcgtgtcaataagtgcattatttctactcaacaatgaaagaatgagt |
15990208 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| | |||||| |||||||| ||| |||||||||||| |
|
|
| T |
15990207 |
atatcatcagtcgaaacaccaatatcatatctccatgaagattc |
15990164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 262 - 493
Target Start/End: Complemental strand, 17221272 - 17221038
Alignment:
| Q |
262 |
ttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcg--aactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||||| ||||||||| ||| ||||| ||||||| | |||| ||||||| | | || ||| | | |||||| |
|
|
| T |
17221272 |
ttgaagcaacaataatttttatgagtattttaaagataacaaacttcgtggaataaatgatgagttttgtgaatggtgtgatctattggtaattgcactt |
17221173 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| |||||||| || ||| ||| ||||||||||||| ||||||| ||||||| ||||||||||| ||| | |
|
|
| T |
17221172 |
gagtttttgttaaatgaacaagaatcacataaatggataagttaaaagtcactcacatcaataagtacattatacctactcatcaatgaaagaacgagga |
17221073 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccat |
493 |
Q |
| |
|
|||||||| ||| ||||||||||| ||||||||| |
|
|
| T |
17221072 |
tatcatcagttgcaacaacaatattgaatccccat |
17221038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 284
Target Start/End: Complemental strand, 25902568 - 25902350
Alignment:
| Q |
71 |
gaagaatgtta-gaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactctttcatgtgt-ttagggagagtttaattg |
167 |
Q |
| |
|
||||||||||| |||||||||| | |||||||| | ||| ||||| |||| ||||| |||||||||| || || |||| |||||| ||| ||||||| |
|
|
| T |
25902568 |
gaagaatgttaagaattaacctattgcatatgtttaggggaagtttaattagaatgatatgaattaaacttttgcacgtgtgttagggggagcttaattg |
25902469 |
T |
|
| Q |
168 |
catattcatgaacattcttacatttatt-attatatccatc-ataaaacttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttga |
265 |
Q |
| |
|
|||| | ||||||| |||||||| || | ||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||| | ||||||||||| |
|
|
| T |
25902468 |
catacataagaacatttttacatttttttactatatttatccataaatcttaagattgattcaaaaagtttgtcatcataaaaaaatgagagattgttga |
25902369 |
T |
|
| Q |
266 |
agcaaaaattattttgatg |
284 |
Q |
| |
|
| ||||||| ||||||||| |
|
|
| T |
25902368 |
aacaaaaatcattttgatg |
25902350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 376
Target Start/End: Original strand, 12103083 - 12103200
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| | ||| || ||||||||| | ||||| ||||||||| ||||||||||| || || |||| || | |||| |
|
|
| T |
12103083 |
tgttgaagcaaaaatctttttgatgaatgtttcaatgataacaaaccttgtggaataaatgataagttttatgaatgttgatctactgatatttgaactt |
12103182 |
T |
|
| Q |
359 |
gagtttttgttaaaagaa |
376 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
12103183 |
gagtttttgttaaaagaa |
12103200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 501
Target Start/End: Original strand, 9005391 - 9005456
Alignment:
| Q |
436 |
actcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||||||||| || |||||| |||||||| |||||| ||| | |||||||||| |
|
|
| T |
9005391 |
actcaacaatgaaagaatgagtatttcatcagttgaaacattgatatcatatctctatgaagattc |
9005456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0811 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold0811
Description:
Target: scaffold0811; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 259 - 501
Target Start/End: Complemental strand, 5170 - 4927
Alignment:
| Q |
259 |
ttgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaaaa-atgataaattttatgaatggcgaactgttgatgttggcact |
357 |
Q |
| |
|
|||||||||||||||| ||||||||| | || ||| ||||||||| || ||||| | ||||||| |||||||||||| || || ||||||| ||||| |
|
|
| T |
5170 |
ttgttgaagcaaaaatctttttgatgaatgttataatgataacaaacctcgtggaatatatgataagttttatgaatggtgatctactgatgtttgcact |
5071 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5070 |
tgagtttttgttaaaagaataggaatcacataagtggataagctagaagccatccacattgataagtgcattatatctacttaacaatgaaagaatgagt |
4971 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| |||||| ||||| |
|
|
| T |
4970 |
gtatcatcagttgaaacaacaatatcatatctccatgacgattc |
4927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 128; Significance: 6e-66; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 259 - 501
Target Start/End: Complemental strand, 792903 - 792660
Alignment:
| Q |
259 |
ttgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcact |
357 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||| ||||||||| |||||||| ||||||||| ||||||||||| || || ||||||| ||||| |
|
|
| T |
792903 |
ttgttgaagcaaaaatctttttgatgaatgttttaatgataacaaacctcatggaataaatgataagttttatgaatgttgatctactgatgtttgcact |
792804 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
792803 |
tgagtttttgtttaaagaacaggaatcacataagtggataagctagaagccacccacattgataagtgcattatatctactcaacaatgaaaaattgagt |
792704 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| |||||||||| | |||| ||| |||||||||||| |
|
|
| T |
792703 |
atatcatcagttgaaacaacgagatcatatctccatgaagattc |
792660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 97 - 272
Target Start/End: Complemental strand, 35169119 - 35168945
Alignment:
| Q |
97 |
atatgttgaagggg-gtttacttagtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttatt |
195 |
Q |
| |
|
||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||||||||| || |
|
|
| T |
35169119 |
atatgttgagggggagtttaattagtttgataagaattaaactcttgcatgtgtttgtggggagtttaattgcatatacatgaacattcttacatttgtt |
35169020 |
T |
|
| Q |
196 |
attatatccatcataaaacttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||| || |||||||| |||||||||||| |||| |
|
|
| T |
35169019 |
attatatccatcataaaacttaagatttattcaaaaagtctgtcat--tacaaaatgggaagattgttgaagaaaaa |
35168945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 42 - 314
Target Start/End: Original strand, 2849427 - 2849704
Alignment:
| Q |
42 |
gagaaaaatctaaaatggatttaattaacgaagaatgtta-gaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactc |
139 |
Q |
| |
|
|||||||||| || ||||||||||| || ||||||||| | |||||||||| | |||||||| | |||| ||||| |||| ||||||||||||||||| |
|
|
| T |
2849427 |
gagaaaaatccaagatggatttaatcaatgaagaatgtaaagaattaacctcttgcatatgtttatggggagtttaattagaatgataagaattaaactc |
2849526 |
T |
|
| Q |
140 |
tttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccat-cataaaacttaagatttattcaaa--aggttt |
236 |
Q |
| |
|
|| || |||||||||| ||| |||||| ||||| |||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||| |||||| |
|
|
| T |
2849527 |
ttgcacgtgtttagggggagcttaatttcatatctatgaacattcttacatttcttattatacacatccataaaacttaagagttattcaaaagaggttt |
2849626 |
T |
|
| Q |
237 |
gtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa |
314 |
Q |
| |
|
|||||||| ||||| ||||||||||| ||| |||||| ||||||||| | |||||| |||||||||| | |||||| |
|
|
| T |
2849627 |
gtcatcatcaaaaagggggagattgtggaaataaaaatctttttgatgaatgttttaatgataacaaatcttatggaa |
2849704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 363 - 501
Target Start/End: Original strand, 10840923 - 10841061
Alignment:
| Q |
363 |
ttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatc |
462 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||| ||||||| ||| ||||||||| | | ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10840923 |
ttttattaaaagaacatgaatcacataattggataaactagaagtcactcacatcaattattacattatatctactcaacaatgaaagaatgagtatatc |
10841022 |
T |
|
| Q |
463 |
atcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||| |||||||||||||||| |||| |||||||||||| |
|
|
| T |
10841023 |
atcagttgaaacaacaatatcgaatctccatgaagattc |
10841061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 22225114 - 22225015
Alignment:
| Q |
402 |
agaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
22225114 |
agaagccacccacattgataagtgcatcatatctacttaacaatgaaagaatgagtatatcatcagttgaaacaacaagatcatatctccatgaagattc |
22225015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 22250942 - 22250843
Alignment:
| Q |
402 |
agaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
22250942 |
agaagccacccacattgataagtgcatcatatctacttaacaatgaaagaatgagtatatcatcagttgaaacaacaagatcatatctccatgaagattc |
22250843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 407
Target Start/End: Complemental strand, 22228143 - 22227995
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||| ||||||||| | ||||| ||||||||| ||||||||||| | || ||||||| || ||| |
|
|
| T |
22228143 |
tgttgaagcaaaaatctttttgatgaatgttttaatgataacaaaccttgtggaataaatgataagttttatgaatgctaatctactgatgtttgccctt |
22228044 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagc |
407 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
22228043 |
gagtttttgttaaaagaacaagaattacataagtggataagctagaagc |
22227995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 2905195 - 2905260
Alignment:
| Q |
380 |
gaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaat |
445 |
Q |
| |
|
||||||| |||||| ||||||||||| |||| | ||||||||||||| ||| |||||||||||| |
|
|
| T |
2905195 |
gaatcacttaagtgaataagctagaaaccacttatatcaataagtgcaatatccctactcaacaat |
2905260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 128; Significance: 6e-66; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 259 - 501
Target Start/End: Original strand, 41524293 - 41524536
Alignment:
| Q |
259 |
ttgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcact |
357 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||| ||||||||| || ||||| |||||| || ||||||||||| || || ||||||| ||||| |
|
|
| T |
41524293 |
ttgttgaagcaaaaatctttttgatgaatgttttaatgataacaaactttgtggaataaatgacaagttttatgaatgttgatctactgatgtttgcact |
41524392 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41524393 |
tgagtttttgttaaaagaacaggaatcacataagtggataagctagaagccacccacattgataagtgcattatatctactcaacaatgaaagaatgagt |
41524492 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| |||||||||||| | || || |||||||||||| |
|
|
| T |
41524493 |
atatcatcagttgaaacaacaaaaacatatttccatgaagattc |
41524536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 259 - 501
Target Start/End: Original strand, 16056606 - 16056849
Alignment:
| Q |
259 |
ttgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcact |
357 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||| ||||||||| | || || ||||||||| ||||||||||| || || ||||||| ||||| |
|
|
| T |
16056606 |
ttgttgaagcaaaaatctttttgatgaatgttttaatgataacaaaccttgtgtaataaatgataagttttatgaatgttgatctactgatgtttgcact |
16056705 |
T |
|
| Q |
358 |
tgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16056706 |
tgagtttttgttaaaagaacacgaatcacataagtggataagctagaagccacccacattgataagtgcatcatatctactcaacaatgaaagaatgagt |
16056805 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||||||||||||| || |||| ||| |||||||||||| |
|
|
| T |
16056806 |
atatcatcaattgaaacaagaagatcatatctccatgaagattc |
16056849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 260 - 501
Target Start/End: Original strand, 10178273 - 10178515
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
|||| |||||||||| ||||||||| || ||||| |||||||| || | ||| ||||||||| |||||||||||| || | |||||||| | || |
|
|
| T |
10178273 |
tgttaaagcaaaaatctttttgatgaataatttaatgataacaagcctcgtagaataaatgataagttttatgaatggtgatatattgatgttttgaatt |
10178372 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||| | |
|
|
| T |
10178373 |
gagtttttgttaaaagaacaggaatcacataagtggataagctagaagccactcacatcaataagtgcactgtatctactcaacaacgaaagaatgagta |
10178472 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
10178473 |
tatcatcagttgaaacaacaatatcaaatatccatgaagattc |
10178515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 260 - 501
Target Start/End: Complemental strand, 53947964 - 53947721
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||| ||||||||| | ||||| ||||||||| ||||||||||| || || ||||||| |||||| |
|
|
| T |
53947964 |
tgttgaagcaaaaatctttttgatgaatgttttaatgataacaaaccttgtggaataaatgataagttttatgaatgttgatctactgatgtttgcactt |
53947865 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataa-gctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagc |
457 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
53947864 |
gagtttttgttaaaagaacaggaatcacataagtaaataaagctagaagccacccacattgataagtgcactatatctactcgacaatgaaagaatgagt |
53947765 |
T |
|
| Q |
458 |
atatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
53947764 |
atatcatcagttgaaacaacaagatcatatctccatgaagattc |
53947721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 325 - 501
Target Start/End: Original strand, 30650020 - 30650196
Alignment:
| Q |
325 |
ttttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagt |
424 |
Q |
| |
|
||||||||||| || || ||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
30650020 |
ttttatgaatgttgatctactgatgtttgcacttgagtttttgttaaaagaacatgaatcacattagtggataagctagaagccacccacattgataagt |
30650119 |
T |
|
| Q |
425 |
gcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| ||| ||||||||||| |
|
|
| T |
30650120 |
gcatcatatctactcaacaatgaaagaatgagtatatcatcagttgaaacaacaagatcatatcttcatgaagattc |
30650196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 129 - 304
Target Start/End: Complemental strand, 50067002 - 50066826
Alignment:
| Q |
129 |
gaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatc-ataaaacttaagatttattc |
227 |
Q |
| |
|
||||||||||||| | |||||||||| ||| |||||| ||||| |||||||||||||||||| || ||||| |||| ||||||||||||| |||||| |
|
|
| T |
50067002 |
gaattaaactcttgaacgtgtttagggggagcttaatttcatatctatgaacattcttacattttttgttatacacatctataaaacttaagacttattc |
50066903 |
T |
|
| Q |
228 |
aaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||| | |||||| ||||||||| |
|
|
| T |
50066902 |
aaaaggtttgtcatcatcaaaaagggggagattgttgaaacaaaaatcttttttatgaatgttttaatgataacaaa |
50066826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 6406584 - 6406543
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
6406584 |
aggtttatcatcttaaaaaatggggagattgttgaggcaaaa |
6406543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 126; Significance: 9e-65; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 277 - 501
Target Start/End: Complemental strand, 73370 - 73145
Alignment:
| Q |
277 |
ttttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaaga |
375 |
Q |
| |
|
||||||||| | |||||| ||||||||| || ||||| |||| |||| |||||||||||| || || ||||| | ||||||||||||||||||||||| |
|
|
| T |
73370 |
ttttgatgaatgttttaatgataacaaacctcgtggaataaataataagttttatgaatggtgatctactgatggttgcacttgagtttttgttaaaaga |
73271 |
T |
|
| Q |
376 |
atgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaaca |
475 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
73270 |
acatgaatcacacaagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagtatatcatcagttgaaaca |
73171 |
T |
|
| Q |
476 |
acaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| ||| |||||||||||| |
|
|
| T |
73170 |
ccaatatcatatctccatgaagattc |
73145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 130 - 358
Target Start/End: Original strand, 35882749 - 35882979
Alignment:
| Q |
130 |
aattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccat-cataaaacttaagatttattca |
228 |
Q |
| |
|
|||||||||||| || |||||||||| ||| |||||| ||||| || ||||||||||||||| |||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
35882749 |
aattaaactcttgcacgtgtttagggggagcttaatttcatatcaataaacattcttacatttcttatcatacacatgcataaaacttaagatttattca |
35882848 |
T |
|
| Q |
229 |
aaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattt |
327 |
Q |
| |
|
|| ||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||| | |||||| ||||||||| | |||||| ||| | ||| ||| |
|
|
| T |
35882849 |
aagggtttgtcatcatcaaaaagggggagattgttgaaccaaaaatctttttgatgaatgttttaatgataacaaacattatggaataaacgctaagttt |
35882948 |
T |
|
| Q |
328 |
tatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||| || || ||||||| |||||| |
|
|
| T |
35882949 |
tatgaatggtgatctactgatgtttgcactt |
35882979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 27160702 - 27160661
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
27160702 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
27160661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0153 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0153
Description:
Target: scaffold0153; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 258 - 501
Target Start/End: Complemental strand, 756 - 512
Alignment:
| Q |
258 |
attgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcac |
356 |
Q |
| |
|
||||||||||||||||| ||||||| | | |||||| ||||||||| || ||||| |||| |||| |||||||||||| | || ||||| | |||| |
|
|
| T |
756 |
attgttgaagcaaaaatctttttgataaatgttttaatgataacaaacctcgtggaataaataataagttttatgaatggtaatctactgatggttgcac |
657 |
T |
|
| Q |
357 |
ttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgag |
456 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
656 |
ttgagtttttgttaaaagaacaggaatcacataagtggatgagcttgaagccactcacgtcaataagtgcattatatctactcaacaatgaaagaatgag |
557 |
T |
|
| Q |
457 |
catatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| |||||||| |||||||| ||| |||||||||||| |
|
|
| T |
556 |
tttatcatcagttgaaacaccaatatcatatctccatgaagattc |
512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 260 - 501
Target Start/End: Complemental strand, 11432359 - 11432118
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| || ||||||||| | |||| ||||||||| ||||||||||| || || | ||||| |||||| |
|
|
| T |
11432359 |
tgttgaagcaaaaatctttttgatgaatattt-aatgataacaaaccttgtggattaaatgataagttttatgaatgttgatctactaatgtttgcactt |
11432261 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
11432260 |
gagtttttgttaaaagaacaggaatcgcataagtggataagctagaagccacccacattgataagtgcactatatctactcaacaatgaaagaatgagta |
11432161 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| |||||||||||| |||| ||| |||||||||||| |
|
|
| T |
11432160 |
tatcatcagttgaaacaacaagatcatatctccatgaagattc |
11432118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 46 - 304
Target Start/End: Original strand, 20035656 - 20035918
Alignment:
| Q |
46 |
aaaatctaaaatggatttaattaacgaagaatgtta-gaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactctttc |
143 |
Q |
| |
|
|||||| ||||| |||||||| || ||| ||||| | |||||||||| | |||||||| | |||| ||||| |||| ||||||||||||||||||| | |
|
|
| T |
20035656 |
aaaatccaaaattgatttaatcaatgaacaatgtaaagaattaacctcttgcatatgtttagggggagtttaattagaatgataagaattaaactcttgc |
20035755 |
T |
|
| Q |
144 |
atgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccat-cataaaacttaagatttattcaaaa-ggtttgtcat |
241 |
Q |
| |
|
| |||||||||| ||| |||||| ||||| |||||||||||||||| | |||||||| ||| ||||||||||| |||||||||||| |||||||||| |
|
|
| T |
20035756 |
acgtgtttagggggagcttaatttcatatctatgaacattcttacatatcttattatacacatccataaaacttacaatttattcaaaagggtttgtcat |
20035855 |
T |
|
| Q |
242 |
cataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
||| |||| ||||||||||||||| ||||||| || ||| || | |||||| ||||||||| |
|
|
| T |
20035856 |
catcaaaaggggggagattgttgaaccaaaaatctttctgacgattgttttaatgataacaaa |
20035918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 303
Target Start/End: Original strand, 7835815 - 7835995
Alignment:
| Q |
123 |
tgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatca-taaaacttaagat |
221 |
Q |
| |
|
||||||||||||||||||| || ||||||| || ||| |||||| ||||| |||||||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
7835815 |
tgataagaattaaactcttgcacgtgtttaagg-gagcttaatttcatatctatgaacattcttacattttttattatacacatctgtaaaacttaagac |
7835913 |
T |
|
| Q |
222 |
ttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaa |
303 |
Q |
| |
|
||||||||||||||| ||||||||||||| || ||||||||||| ||||||| |||| |||| | ||||| |||||||| |
|
|
| T |
7835914 |
ttattcaaaaggtttttcatcataaaaaagggaaagattgttgaaacaaaaatcttttttatgaatgatttaatgataacaa |
7835995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 152 - 304
Target Start/End: Original strand, 996495 - 996648
Alignment:
| Q |
152 |
agggagagtttaattgcatattcatgaacattcttacatttattattatatccatc-ataaaacttaagatttattcaaaaggtttgtcatcataaaaaa |
250 |
Q |
| |
|
|||| ||| |||||| ||||| |||||||||||||||||| || ||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
996495 |
agggggagcttaatttcatatctatgaacattcttacattttttgttatacatatctataaaacttaagacttattcaaaaggtttgtcatcatcaaaaa |
996594 |
T |
|
| Q |
251 |
tggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
||||||||||||||| ||||||| |||| |||| | |||||| ||||||||| |
|
|
| T |
996595 |
aggggagattgttgaaacaaaaatcttttttatgaatgttttaatgataacaaa |
996648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 7806392 - 7806543
Alignment:
| Q |
123 |
tgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatca-taaaacttaagat |
221 |
Q |
| |
|
||||||||||| ||||||| || ||||||| || ||| |||||| ||||| |||||||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
7806392 |
tgataagaattcaactcttgcacgtgtttaagg-gagcttaatttcatatctatgaacattcttacattttttattatacacatctgtaaaacttaagac |
7806490 |
T |
|
| Q |
222 |
ttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaat |
274 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
7806491 |
ttattcaaaaggtttgtcatcataaaaaagggaaggattgttgaaacaaaaat |
7806543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 18803808 - 18803747
Alignment:
| Q |
123 |
tgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattc |
184 |
Q |
| |
|
||||||||||||||||||| || ||||||||| |||||||||| ||||| |||||||||| |
|
|
| T |
18803808 |
tgataagaattaaactcttgcacatgtttagggggagtttaatttcatatatatgaacattc |
18803747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 277 - 501
Target Start/End: Original strand, 31103832 - 31104057
Alignment:
| Q |
277 |
ttttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcacttgagtttttgttaaaaga |
375 |
Q |
| |
|
||||||||| | |||||| |||||||||||| | ||| ||||||||| ||||||||||| || | ||||||| ||||||||||||||||||||||| |
|
|
| T |
31103832 |
ttttgatgaatgttttaatgataacaaattttgtagaataaatgataagttttatgaatgttgatttactgatgtttgcacttgagtttttgttaaaaga |
31103931 |
T |
|
| Q |
376 |
atgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcatatcatcaattgaaaca |
475 |
Q |
| |
|
| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
31103932 |
acatgaatcacataagtggacaagctacaagccacccacattgataagtgcattatatctactcaacaatgaaagaatgagtatatcatcagttgaaaca |
31104031 |
T |
|
| Q |
476 |
acaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||||||| ||| ||| |||||||| |
|
|
| T |
31104032 |
acaatatcatatctccaagaagattc |
31104057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 260 - 501
Target Start/End: Original strand, 36312609 - 36312851
Alignment:
| Q |
260 |
tgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcactt |
358 |
Q |
| |
|
||||||||||||||| ||||||||| | |||||| ||||||||| || || || |||| |||| |||||||||||| | || ||||| | |||||| |
|
|
| T |
36312609 |
tgttgaagcaaaaatctttttgatgaatgttttaatgataacaaacctcgtgaaataaataataagttttatgaatggtaatctactgatggttgcactt |
36312708 |
T |
|
| Q |
359 |
gagtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagca |
458 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36312709 |
gagtttttgttaaaagaacaggaatcacataagtggatgagcttgaagccactcacgtcaataagtgcattatatctactcaacaatgaaagaatgaatt |
36312808 |
T |
|
| Q |
459 |
tatcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
|||||||| |||||||| |||||||| ||| |||| ||||||| |
|
|
| T |
36312809 |
tatcatcagttgaaacaccaatatcatatctccataaagattc |
36312851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 20957480 - 20957521
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
20957480 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
20957521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0535 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0535
Description:
Target: scaffold0535; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 261 - 501
Target Start/End: Complemental strand, 2611 - 2370
Alignment:
| Q |
261 |
gttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcacttg |
359 |
Q |
| |
|
||||||| |||||| |||||||||| | |||||| ||||| ||| || ||||| |||| |||| |||||||||||| | || ||||| | ||||||| |
|
|
| T |
2611 |
gttgaagtaaaaatcattttgatgaatgttttaatgataaaaaacctcgtggaataaataataagttttatgaatggtaatctactgatggttgcacttg |
2512 |
T |
|
| Q |
360 |
agtttttgttaaaagaatgggaatcacataagtggataagctagaagccacccacatcaataagtgcattatatctactcaacaatgaaagaatgagcat |
459 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||| |||||| || |
|
|
| T |
2511 |
agtttttgttaaaagaacaggaatcacataagtggatgagctagaagccaatcatgtcaataagtgcattatatctactcaacaatgaaataatgagtat |
2412 |
T |
|
| Q |
460 |
atcatcaattgaaacaacaatatcaaatccccatgaagattc |
501 |
Q |
| |
|
||||| | |||||||| |||||||||||| |||||||||||| |
|
|
| T |
2411 |
atcattagttgaaacaccaatatcaaatctccatgaagattc |
2370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 81 - 304
Target Start/End: Complemental strand, 9295243 - 9295018
Alignment:
| Q |
81 |
agaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaa |
179 |
Q |
| |
|
||||||||||| | |||||||| | |||| ||||| |||| |||||||||||||||| || || |||||||||| || |||||| ||| | ||||| |
|
|
| T |
9295243 |
agaattaacctcttgcatatgtttagggggagtttaattagaatgataagaattaaacttttgcacgtgtttagggggaacttaatttcatgtctatgaa |
9295144 |
T |
|
| Q |
180 |
cattcttacatttattattatatccatc-ataaaacttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattatt |
278 |
Q |
| |
|
||||||||| ||| |||||||| |||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| || |
|
|
| T |
9295143 |
cattcttacgttttttattatacacatccataaaacttaagacttattcaaaaggtttgtcatcatcaaaaagggggagattgttgaaacaaaaatcttt |
9295044 |
T |
|
| Q |
279 |
ttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
||||| | | |||||| ||||||||| |
|
|
| T |
9295043 |
ttgattaatgttttaatgataacaaa |
9295018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 201
Target Start/End: Original strand, 9307604 - 9307725
Alignment:
| Q |
81 |
agaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaa |
179 |
Q |
| |
|
||||||||||| | |||||||| | |||| ||||| |||| ||||||||||||||||||| || |||||||||| ||| |||||| ||||| ||||| |
|
|
| T |
9307604 |
agaattaacctcttgcatatgtttagggggagtttaattagaatgataagaattaaactcttgcacgtgtttagggggagcttaatttcatatctatgaa |
9307703 |
T |
|
| Q |
180 |
cattcttacatttattattata |
201 |
Q |
| |
|
||||||||||||| || ||||| |
|
|
| T |
9307704 |
cattcttacattttttgttata |
9307725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0206
Description:
Target: scaffold0206; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 46 - 304
Target Start/End: Original strand, 7586 - 7848
Alignment:
| Q |
46 |
aaaatctaaaatggatttaattaacgaagaatgtta-gaattaaccttctacatatgttgaagggg-gtttacttagtttgataagaattaaactctttc |
143 |
Q |
| |
|
|||||| ||||| |||||||| || ||| ||||| | |||||||||| | |||||||| | |||| ||||| |||| ||||||||||||||||||| | |
|
|
| T |
7586 |
aaaatccaaaattgatttaatcaatgaacaatgtaaagaattaacctcttgcatatgtttagggggagtttaattagaatgataagaattaaactcttgc |
7685 |
T |
|
| Q |
144 |
atgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccat-cataaaacttaagatttattcaaaa-ggtttgtcat |
241 |
Q |
| |
|
| |||||||||| ||| |||||| ||||| |||||||||||||||| | |||||||| ||| ||||||||||| |||||||||||| |||||||||| |
|
|
| T |
7686 |
acgtgtttagggggagcttaatttcatatctatgaacattcttacatatcttattatacacatccataaaacttacaatttattcaaaagggtttgtcat |
7785 |
T |
|
| Q |
242 |
cataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
||| |||| ||||||||||||||| ||||||| || ||| || | |||||| ||||||||| |
|
|
| T |
7786 |
catcaaaaggggggagattgttgaaccaaaaatctttctgacgattgttttaatgataacaaa |
7848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0186 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0186
Description:
Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 304
Target Start/End: Original strand, 2848 - 2945
Alignment:
| Q |
207 |
cataaaacttaagatttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaattattttgatgagtattttaacgataacaaa |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| | |||||| ||||||||| |
|
|
| T |
2848 |
cataaaacttaagatttattcaaaaggtttgtcatcataaaaaagatggagattgttgaaccaaaaatcattttgatgaatgttttaatgataacaaa |
2945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 274
Target Start/End: Complemental strand, 12297 - 12146
Alignment:
| Q |
123 |
tgataagaattaaactctttcatgtgtttagggagagtttaattgcatattcatgaacattcttacatttattattatatccatca-taaaacttaagat |
221 |
Q |
| |
|
||||||||||| ||||||| || ||||||| || ||| |||||| ||||| |||||||||||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
12297 |
tgataagaattcaactcttgcacgtgtttaagg-gagcttaatttcatatctatgaacattcttacattttttattatacacatctgtaaaacttaagac |
12199 |
T |
|
| Q |
222 |
ttattcaaaaggtttgtcatcataaaaaatggggagattgttgaagcaaaaat |
274 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
12198 |
ttattcaaaaggtttgtcatcataaaaaagggaaggattgttgaaacaaaaat |
12146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 258 - 407
Target Start/End: Complemental strand, 4065 - 3915
Alignment:
| Q |
258 |
attgttgaagcaaaaattattttgatgagtattttaacgataacaaatttcatggaa-aaatgataaattttatgaatggcgaactgttgatgttggcac |
356 |
Q |
| |
|
||||||||||||||||| ||||||| | | ||||| ||||||||| || ||||| |||| |||| |||||||||||| || || ||||| | |||| |
|
|
| T |
4065 |
attgttgaagcaaaaatctttttgataaatgttttattgataacaaacctcgtggaataaataataagttttatgaatggtgatctactgatggttgcac |
3966 |
T |
|
| Q |
357 |
ttgagtttttgttaaaagaatgggaatcacataagtggataagctagaagc |
407 |
Q |
| |
|
|||||||||||||||||||| | |||| || ||||||||||||||||||| |
|
|
| T |
3965 |
ttgagtttttgttaaaagaacagtaatcgcacaagtggataagctagaagc |
3915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 3915 - 3849
Alignment:
| Q |
434 |
ctactcaacaatgaaagaatgagcatatcatcaattgaaacaacaatatcaaatccccatgaagatt |
500 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||| |||||| | ||| ||||||||||| |
|
|
| T |
3915 |
ctactcaacaatgaaagaatgaatatatcatcagttgaaacatcaatattatatctccatgaagatt |
3849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0764 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0764
Description:
Target: scaffold0764; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 1570 - 1529
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
1570 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
1529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 5039 - 5080
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
5039 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
5080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 19196 - 19237
Alignment:
| Q |
231 |
aggtttgtcatcataaaaaatggggagattgttgaagcaaaa |
272 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
19196 |
aggtttgtcatcatcaaaaagggggagattgttgaggcaaaa |
19237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University