View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14329_high_5 (Length: 514)
Name: NF14329_high_5
Description: NF14329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14329_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 270 - 498
Target Start/End: Original strand, 53538378 - 53538606
Alignment:
| Q |
270 |
tccatcatttgaacaacaattactgcaagtcactcgcaagcaaaagaatgatagtgagaggagaagcactgattataaagaatgatagtgctgattttca |
369 |
Q |
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| T |
53538378 |
tccatcatatgaacaacaattactgcaagtcactcgcaagcaaaagaatgatagtgagaggagaagcactgattataaagaatgatagtgctgattttca |
53538477 |
T |
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| Q |
370 |
atagtgagctctgccatctaattctaaccctcatcatatgattgttgaagcctttgatcaagtgaggacatggagcctacatggtcacctaaccttcctt |
469 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53538478 |
atagtgagctctgccatctaattctaaccctcatcatatgattgttgaagcctttgatcaagtgaggacatggagcctacatggtcacctaaccttcctt |
53538577 |
T |
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| Q |
470 |
ctataattcattcaatcagctgctgtttg |
498 |
Q |
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| T |
53538578 |
ctataattcattcaatcagctgctgtttg |
53538606 |
T |
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