View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14329_low_6 (Length: 471)

Name: NF14329_low_6
Description: NF14329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14329_low_6
NF14329_low_6
[»] chr7 (32 HSPs)
chr7 (203-466)||(35352097-35352361)
chr7 (19-188)||(35352612-35352781)
chr7 (70-178)||(11056390-11056498)
chr7 (69-188)||(12856553-12856672)
chr7 (69-188)||(14615194-14615313)
chr7 (69-188)||(26050785-26050904)
chr7 (69-188)||(26060144-26060263)
chr7 (70-188)||(14610129-14610247)
chr7 (203-339)||(12856953-12857089)
chr7 (203-339)||(26051185-26051321)
chr7 (203-339)||(26056298-26056434)
chr7 (203-339)||(26060544-26060680)
chr7 (203-339)||(26065657-26065793)
chr7 (69-188)||(26055898-26056017)
chr7 (69-188)||(26065257-26065376)
chr7 (202-316)||(5440227-5440341)
chr7 (202-316)||(5449237-5449351)
chr7 (70-188)||(12851439-12851557)
chr7 (70-196)||(4181694-4181820)
chr7 (203-339)||(12851840-12851976)
chr7 (207-299)||(4181347-4181439)
chr7 (222-339)||(14610512-14610629)
chr7 (69-183)||(5436857-5436970)
chr7 (70-188)||(37460162-37460279)
chr7 (203-304)||(37459802-37459903)
chr7 (397-442)||(4181276-4181321)
chr7 (393-442)||(12852030-12852079)
chr7 (361-442)||(12857111-12857192)
chr7 (361-442)||(26051343-26051424)
chr7 (361-442)||(26056456-26056537)
chr7 (361-442)||(26060702-26060783)
chr7 (361-442)||(26065815-26065896)
[»] chr1 (36 HSPs)
chr1 (207-442)||(16051353-16051588)
chr1 (203-444)||(3468232-3468473)
chr1 (69-183)||(43358515-43358629)
chr1 (202-339)||(43358906-43359043)
chr1 (75-188)||(10186897-10187010)
chr1 (203-359)||(21431565-21431722)
chr1 (73-188)||(16050974-16051089)
chr1 (69-188)||(28598073-28598192)
chr1 (207-339)||(10186485-10186617)
chr1 (203-339)||(28574461-28574597)
chr1 (203-339)||(28598473-28598609)
chr1 (202-321)||(13654472-13654591)
chr1 (70-188)||(28574062-28574180)
chr1 (207-328)||(19310981-19311102)
chr1 (70-188)||(13654100-13654218)
chr1 (104-196)||(3465272-3465364)
chr1 (93-188)||(19310613-19310708)
chr1 (69-179)||(44524348-44524458)
chr1 (219-316)||(1187991-1188088)
chr1 (81-188)||(35624793-35624900)
chr1 (73-182)||(1187595-1187705)
chr1 (69-183)||(29681355-29681468)
chr1 (221-323)||(35653173-35653275)
chr1 (69-183)||(48366378-48366491)
chr1 (103-188)||(21431987-21432072)
chr1 (70-183)||(17415511-17415624)
chr1 (207-288)||(44523986-44524069)
chr1 (257-323)||(10185907-10185973)
chr1 (203-248)||(3701493-3701538)
chr1 (202-245)||(17414566-17414609)
chr1 (257-339)||(3701369-3701451)
chr1 (257-328)||(21431537-21431608)
chr1 (203-245)||(10185832-10185874)
chr1 (257-323)||(43359020-43359085)
chr1 (361-442)||(28574619-28574700)
chr1 (361-442)||(28598631-28598712)
[»] chr2 (22 HSPs)
chr2 (207-339)||(42780341-42780473)
chr2 (75-188)||(42779953-42780066)
chr2 (70-188)||(14917703-14917821)
chr2 (78-188)||(16284209-16284319)
chr2 (67-188)||(17720847-17720968)
chr2 (203-339)||(20892254-20892389)
chr2 (69-173)||(716125-716229)
chr2 (203-339)||(14917286-14917422)
chr2 (203-339)||(45120551-45120687)
chr2 (69-188)||(39196193-39196312)
chr2 (70-183)||(45120151-45120264)
chr2 (203-339)||(17720430-17720566)
chr2 (202-338)||(30283355-30283491)
chr2 (202-312)||(716417-716527)
chr2 (221-299)||(16286003-16286081)
chr2 (257-323)||(20892211-20892277)
chr2 (397-443)||(30283250-30283296)
chr2 (361-442)||(17720000-17720081)
chr2 (397-442)||(14917183-14917228)
chr2 (69-130)||(30283809-30283869)
chr2 (397-442)||(42780551-42780596)
chr2 (393-442)||(45120741-45120790)
[»] chr4 (39 HSPs)
chr4 (203-433)||(54858987-54859218)
chr4 (208-339)||(3409512-3409643)
chr4 (202-332)||(32429204-32429334)
chr4 (69-188)||(3415473-3415592)
chr4 (69-188)||(18716250-18716369)
chr4 (69-188)||(18736923-18737042)
chr4 (69-188)||(35095792-35095911)
chr4 (203-339)||(35091079-35091215)
chr4 (203-339)||(35096192-35096328)
chr4 (73-188)||(47071176-47071292)
chr4 (69-188)||(18670605-18670724)
chr4 (75-188)||(32429605-32429718)
chr4 (207-373)||(47071553-47071725)
chr4 (207-383)||(14643605-14643781)
chr4 (68-188)||(35090678-35090798)
chr4 (70-188)||(3425021-3425139)
chr4 (202-328)||(30019763-30019888)
chr4 (70-183)||(14646594-14646707)
chr4 (202-339)||(18670993-18671130)
chr4 (80-177)||(30020182-30020279)
chr4 (202-339)||(25618211-25618341)
chr4 (205-331)||(34279425-34279551)
chr4 (70-162)||(34128563-34128655)
chr4 (203-367)||(22118869-22119035)
chr4 (257-442)||(34279254-34279440)
chr4 (69-188)||(34279812-34279932)
chr4 (203-285)||(34128218-34128300)
chr4 (253-339)||(18716694-18716780)
chr4 (253-339)||(18737367-18737453)
chr4 (257-328)||(25618163-25618234)
chr4 (257-339)||(18671107-18671189)
chr4 (140-193)||(54859472-54859525)
chr4 (208-248)||(3424705-3424745)
chr4 (220-314)||(34601967-34602061)
chr4 (257-339)||(18716757-18716839)
chr4 (257-323)||(32429154-32429220)
chr4 (256-339)||(3424217-3424300)
chr4 (257-339)||(18737430-18737512)
chr4 (361-442)||(35091237-35091318)
[»] chr8 (27 HSPs)
chr8 (203-444)||(43956649-43956890)
chr8 (73-188)||(18608949-18609064)
chr8 (202-332)||(10340878-10341008)
chr8 (69-188)||(14315232-14315351)
chr8 (69-188)||(26982197-26982316)
chr8 (202-367)||(18608526-18608690)
chr8 (203-339)||(14314815-14314951)
chr8 (203-339)||(14318519-14318655)
chr8 (203-339)||(26986893-26987029)
chr8 (203-339)||(34108395-34108531)
chr8 (69-188)||(34107993-34108112)
chr8 (89-188)||(14318936-14319035)
chr8 (202-359)||(25953058-25953216)
chr8 (203-339)||(18494081-18494216)
chr8 (207-339)||(26981779-26981911)
chr8 (68-188)||(26987310-26987430)
chr8 (69-178)||(25953490-25953599)
chr8 (80-188)||(43957170-43957278)
chr8 (207-382)||(1781986-1782158)
chr8 (80-176)||(10341289-10341385)
chr8 (70-188)||(18884829-18884947)
chr8 (397-444)||(10340696-10340743)
chr8 (397-442)||(14318416-14318461)
chr8 (397-442)||(18493978-18494023)
chr8 (397-442)||(26981676-26981721)
chr8 (397-442)||(26986790-26986835)
chr8 (361-442)||(34108553-34108634)
[»] chr5 (26 HSPs)
chr5 (203-442)||(13556105-13556344)
chr5 (203-332)||(2023118-2023246)
chr5 (68-188)||(9877860-9877980)
chr5 (69-188)||(9872745-9872864)
chr5 (69-188)||(39908722-39908841)
chr5 (69-183)||(43378201-43378315)
chr5 (207-374)||(43402000-43402169)
chr5 (203-328)||(35368816-35368941)
chr5 (203-339)||(9872328-9872464)
chr5 (203-339)||(9877443-9877579)
chr5 (203-339)||(39904009-39904145)
chr5 (203-339)||(39909122-39909258)
chr5 (70-188)||(39903610-39903728)
chr5 (80-188)||(2022738-2022846)
chr5 (70-177)||(13556637-13556744)
chr5 (202-323)||(43540703-43540821)
chr5 (103-188)||(35369223-35369311)
chr5 (103-188)||(25183892-25183981)
chr5 (203-248)||(4555784-4555829)
chr5 (257-373)||(35368712-35368828)
chr5 (385-442)||(4555961-4556018)
chr5 (257-339)||(2023230-2023312)
chr5 (397-442)||(2024422-2024467)
chr5 (397-442)||(9872225-9872270)
chr5 (397-442)||(9877340-9877385)
chr5 (393-442)||(39909312-39909361)
[»] chr6 (21 HSPs)
chr6 (204-323)||(21936606-21936725)
chr6 (69-188)||(24509149-24509268)
chr6 (70-188)||(21275538-21275656)
chr6 (203-339)||(21275937-21276073)
chr6 (70-197)||(20752430-20752556)
chr6 (69-188)||(24509467-24509586)
chr6 (203-361)||(24509864-24510024)
chr6 (202-328)||(21937729-21937855)
chr6 (202-328)||(24508775-24508901)
chr6 (69-196)||(21936993-21937120)
chr6 (202-359)||(20752022-20752179)
chr6 (75-180)||(21937340-21937445)
chr6 (69-188)||(2887258-2887377)
chr6 (69-188)||(2888980-2889099)
chr6 (77-188)||(12909401-12909512)
chr6 (77-188)||(12934508-12934619)
chr6 (91-158)||(26910702-26910769)
chr6 (218-441)||(11182989-11183212)
chr6 (361-442)||(21276095-21276176)
chr6 (397-442)||(21936408-21936453)
chr6 (406-442)||(21937992-21938028)
[»] chr3 (61 HSPs)
chr3 (203-328)||(49784650-49784775)
chr3 (67-183)||(1302571-1302687)
chr3 (203-339)||(4049972-4050108)
chr3 (203-339)||(8458476-8458612)
chr3 (203-339)||(10584762-10584898)
chr3 (69-188)||(5458333-5458452)
chr3 (69-188)||(6853273-6853392)
chr3 (69-188)||(8458075-8458194)
chr3 (69-188)||(8464514-8464633)
chr3 (69-188)||(10591616-10591735)
chr3 (69-188)||(31076723-31076842)
chr3 (69-188)||(33702921-33703040)
chr3 (70-188)||(5481809-5481927)
chr3 (203-339)||(1302148-1302284)
chr3 (203-339)||(4055106-4055242)
chr3 (203-443)||(8464914-8465154)
chr3 (203-339)||(10672842-10672978)
chr3 (69-188)||(4054705-4054824)
chr3 (69-188)||(6858376-6858495)
chr3 (69-188)||(10586503-10586622)
chr3 (69-188)||(10673259-10673378)
chr3 (69-188)||(31081828-31081947)
chr3 (70-188)||(4049572-4049690)
chr3 (70-188)||(10678374-10678492)
chr3 (203-339)||(5481392-5481528)
chr3 (203-339)||(6852856-6852992)
chr3 (203-339)||(6857959-6858095)
chr3 (203-339)||(10591199-10591335)
chr3 (69-188)||(29827192-29827312)
chr3 (203-339)||(31076306-31076442)
chr3 (203-339)||(31081411-31081547)
chr3 (203-339)||(33702503-33702639)
chr3 (73-188)||(33703068-33703183)
chr3 (202-328)||(29827567-29827692)
chr3 (203-339)||(5457915-5458051)
chr3 (68-178)||(20890824-20890934)
chr3 (203-339)||(10677955-10678093)
chr3 (203-255)||(18024168-18024220)
chr3 (257-316)||(20891281-20891340)
chr3 (257-328)||(29827680-29827751)
chr3 (202-248)||(20891190-20891236)
chr3 (203-245)||(33703464-33703506)
chr3 (257-339)||(49784763-49784845)
chr3 (257-316)||(20891354-20891413)
chr3 (397-442)||(269535-269580)
chr3 (103-188)||(3187773-3187858)
chr3 (121-188)||(49784304-49784369)
chr3 (361-443)||(1302044-1302126)
chr3 (397-443)||(6852752-6852798)
chr3 (397-443)||(10584658-10584704)
chr3 (397-443)||(33702399-33702445)
chr3 (361-442)||(4050130-4050211)
chr3 (361-442)||(4055264-4055345)
chr3 (397-442)||(5481289-5481334)
chr3 (397-442)||(6857856-6857901)
chr3 (397-442)||(10672739-10672784)
chr3 (397-442)||(10677852-10677897)
chr3 (397-442)||(29827840-29827885)
chr3 (397-442)||(31076201-31076246)
chr3 (397-442)||(31081308-31081353)
chr3 (207-255)||(18023560-18023607)
[»] scaffold0223 (2 HSPs)
scaffold0223 (203-339)||(1923-2059)
scaffold0223 (70-188)||(7298-7416)
[»] scaffold0391 (2 HSPs)
scaffold0391 (69-188)||(16371-16490)
scaffold0391 (66-151)||(16273-16358)
[»] scaffold0006 (2 HSPs)
scaffold0006 (202-321)||(144233-144352)
scaffold0006 (70-188)||(143861-143979)
[»] scaffold0005 (2 HSPs)
scaffold0005 (207-383)||(173511-173687)
scaffold0005 (70-183)||(170583-170696)
[»] scaffold0756 (1 HSPs)
scaffold0756 (70-171)||(3910-4011)


Alignment Details
Target: chr7 (Bit Score: 137; Significance: 2e-71; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 203 - 466
Target Start/End: Complemental strand, 35352361 - 35352097
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcaca-tgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||| ||| |||||||||||||| ||||| | ||||||||||  |||||||||||||| |||||||| |||||||||||||||| ||||  |||| |    
T  35352361 caagcatatatggtgcattatatgacccttcaaaatgagagaaaatgtctctttgacttgattcaacgatttggttcattaagcacccatttatcaaagg 35352262  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataactt 401  Q
    ||||||| ||||||| |||||| ||||||||  ||||| |||||  |||||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  35352261 ttatgattatatacacttgaatcaatgttatgattcattaaatatccatttgtcaaagattccaatatatataaataattctcataaaaacctataactt 35352162  T
Q  402 ttgattctaaaatgatttcattatttcggaaatcaccaacattcttcaagtactcctttgcttct 466  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| |||| ||| ||| ||||    
T  35352161 ttgattctaaagtaatttcattatttcggaaatcaccaacattcttcgagtagtccattgtttct 35352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 35352781 - 35352612
Alignment:
Q  19 acatcaactaaattcaatgtggtcagaggagggaaacgatttggtgctatttgttatataacttgattgatgggaagaagctgttgcacttgaaacatga 118  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||     
T  35352781 acatcaactaaattcaatgtggtcagaggtggaaaacaatttggtgctatttgttatataacttgattgatgggaagaggttcctgcacttgaaacatgg 35352682  T
Q  119 aaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35352681 aaagtttaatggttaagcatgtaaaactcaaagcgcatggggttaccacactaacctttaggttcaattc 35352612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 11056390 - 11056498
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| | || |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11056390 tgttatatatcttgtttgttgggaagaggttgctgcacttgaaacatgaaatgtttaatgattatgcatgtaaaactcaaagcgcatggggttgccacac 11056489  T
Q  170 taaccttta 178  Q
    |||||||||    
T  11056490 taaccttta 11056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 12856553 - 12856672
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  12856553 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 12856652  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  12856653 ctaacctttaggttcgattc 12856672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 14615194 - 14615313
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  14615194 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggtttccaca 14615293  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  14615294 ctaacctttaggttcgattc 14615313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26050785 - 26050904
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  26050785 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 26050884  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  26050885 ctaacctttaggttcgattc 26050904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26060144 - 26060263
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  26060144 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 26060243  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  26060244 ctaacctttaggttcgattc 26060263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 14610129 - 14610247
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  14610129 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 14610228  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  14610229 taacctttaggttcgattc 14610247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 12856953 - 12857089
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  12856953 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 12857052  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  12857053 tataaccatatatacttgaatcaatgtcatggttcat 12857089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 26051185 - 26051321
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  26051185 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 26051284  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  26051285 tataaccatatatacttgaatcaatgtcatggttcat 26051321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 26056298 - 26056434
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  26056298 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 26056397  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  26056398 tataaccatatatacttgaatcaatgtcatggttcat 26056434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 26060544 - 26060680
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  26060544 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 26060643  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  26060644 tataaccatatatacttgaatcaatgtcatggttcat 26060680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 26065657 - 26065793
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  26065657 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 26065756  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  26065757 tataaccatatatacttgaatcaatgtcatggttcat 26065793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26055898 - 26056017
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||| |||| |||||    
T  26055898 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatgaggttgccaca 26055997  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  26055998 ctaacctttaggttcgattc 26056017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 26065257 - 26065376
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||| |||| |||||    
T  26065257 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatgaggttgccaca 26065356  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  26065357 ctaacctttaggttcgattc 26065376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 5440341 - 5440227
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||| | ||||||||||||| ||||  ||| ||||| |    
T  5440341 ccaagcatttatagtgcattatatgacccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaatcacccctttcccaaaag 5440242  T
Q  302 ttatgatcatataca 316  Q
    |||||| ||||||||    
T  5440241 ttatgaccatataca 5440227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 316
Target Start/End: Complemental strand, 5449351 - 5449237
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |  ||||||||||||||| | ||||||||||||| ||||  ||| ||||| |    
T  5449351 ccaagcatttatagtgcattatatgacccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaatcacccctttcccaaaag 5449252  T
Q  302 ttatgatcatataca 316  Q
    |||||| ||||||||    
T  5449251 ttatgaccatataca 5449237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 12851439 - 12851557
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||  ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  12851439 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaaactgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 12851538  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  12851539 taacctttaggttcgattc 12851557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 4181820 - 4181694
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    |||||||||||||||||| | | |||| | || |||||||||||| |||||||||||||| ||||| |||||||| |||||| | ||||||||  |||||    
T  4181820 tgttatataacttgattgttagaaagaggttgctgcacttgaaacttgaaaagtttaatggttatgtatgtaaaattcaaagcgtatggggttgtcacac 4181721  T
Q  170 taacctttaggttcaattcctccccac 196  Q
    |||||||||||||| |||| |||||||    
T  4181720 taacctttaggttcgattcttccccac 4181694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 12851840 - 12851976
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||| |||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  12851840 caagtatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 12851939  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  12851940 tataaccatatatacttgaatcaatgtcatggttcat 12851976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 207 - 299
Target Start/End: Complemental strand, 4181439 - 4181347
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaa 299  Q
    |||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||| | || |||||||||||||||  |||||||||    
T  4181439 catttatagtgcattatatgactcttcatatgagagaaaacaccattttgacttgaatcaatgttaaggttcattaagcacccctttgccaaa 4181347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 222 - 339
Target Start/End: Original strand, 14610512 - 14610629
Alignment:
Q  222 atatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttga 321  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |  ||| |||||||||||||  ||||||||| ||||| | |||||| | ||||    
T  14610512 atatgactcttcacatgagagaaagcacctctttgacttgaatcaatgccatgattcattaagcacccttttgccaaaggttataaccatatatacttga 14610611  T
Q  322 attaatgttatcgttcat 339  Q
    || ||||| || ||||||    
T  14610612 atcaatgtcatggttcat 14610629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 5436970 - 5436857
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||| | |||||||| |||| |||||||||||| |||||| | ||||| |||||||||| |||||||||| |||||||||| ||| |    
T  5436970 ttgttgtatatcttgatcgttgggaagatgctgctgcacttgaaacttgaaaaatctaatggttatgcatgt-aaactcaaagcgcatggggttgccata 5436872  T
Q  169 ctaacctttaggttc 183  Q
    | |||||||||||||    
T  5436871 ccaacctttaggttc 5436857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 37460279 - 37460162
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    |||||||||||||||||| ||| ||||  |||||| ||||||||| |||||  |||||||||||||||||||||||| |||| |||  ||||| ||| ||    
T  37460279 tgttatataacttgattgctggaaagagactgttggacttgaaacctgaaatttttaatgattatgcatgtaaaacttaaagcgca-cgggttcccatac 37460181  T
Q  170 taacctttaggttcaattc 188  Q
    |||||| ||| ||||||||    
T  37460180 taacctatagcttcaattc 37460162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 37459903 - 37459802
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||| ||||||||||||||||||| |  ||||||||||||||||||    ||||| ||||||  | | ||||||||||||| |||  |||||||||| ||    
T  37459903 caagtatttatagtgcattatatgtccattcacatgagagaaaacacgcatttgatttgaattgatgttatggttcattaaacactcatttgccaaaggt 37459804  T
Q  303 ta 304  Q
    ||    
T  37459803 ta 37459802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 4181321 - 4181276
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||||||| |||| ||||| |||||||| ||||||||||||||    
T  4181321 aacttttgattttaaagtgattccattattttggaaatcaccaaca 4181276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 12852030 - 12852079
Alignment:
Q  393 ttataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  12852030 ttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 12852079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 12857111 - 12857192
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  12857111 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 12857192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 26051343 - 26051424
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26051343 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26051424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 26056456 - 26056537
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26056456 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26056537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 26060702 - 26060783
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26060702 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26060783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 26065815 - 26065896
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26065815 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 26065896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 207 - 442
Target Start/End: Original strand, 16051353 - 16051588
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    ||||||||||||||||||||||  |||||||||| ||||||| |  ||||||||||||||| |||||||||||||||||||  |||||||||||||||||    
T  16051353 catttatagtgcattatatgaccattcacatgagtgaaaacacccttttgacttgaatcaatgatatggttcattaagcactcatttgccaaatgttatg 16051452  T
Q  307 atcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataacttttgat 406  Q
    |||||||||| |||||| |||| ||| |||||| || ||  |||||  ||||  ||  ||| ||||| ||| ||||| ||||| | |||||||||||| |    
T  16051453 atcatatacacttgaatcaatgctatggttcattaagtatccatttaccaaatgttataatgtatatgaatgattcccataaagagttataacttttggt 16051552  T
Q  407 tctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||| ||||| ||||||||  |||||||||||||    
T  16051553 tctaaagtgattccattattttagaaatcaccaaca 16051588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 203 - 444
Target Start/End: Original strand, 3468232 - 3468473
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  3468232 caagcatttatagtgcattatatgactcttcacatgagagaaagcacatctttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 3468331  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcatca--aatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataact 400  Q
    ||| | |||||| | |||||| ||||| || |||||| |  |||| | | |  |  ||  ||||||| ||||| |||  ||||||| || ||||| ||||    
T  3468332 tataaccatatatacttgaatcaatgtcatggttcattattaataataaataat--aatgttccaatgtatatgaatggttcctatgaagaattacaact 3468429  T
Q  401 tttgattctaaaatgatttcattatttcggaaatcaccaacatt 444  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  3468430 tttgattctaaaatgattccattattttggaaatcaccaacatt 3468473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 43358515 - 43358629
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  43358515 ttgttgtatatcttgattgttgggaagatgctgttgcacttgaaacctgaaaagtttaatgattatgcatgtaaaactcaaagcgcatgaggttgccaca 43358614  T
Q  169 ctaacctttaggttc 183  Q
    ||||| |||||||||    
T  43358615 ctaacatttaggttc 43358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 43358906 - 43359043
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaat 300  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||| | |||| |||||||||||||  |||||||||     
T  43358906 ccaagcatttatagtgcattataggactcttcacatgagagaaagca-ctcatttgacttgaatcaatgctatgattcattaagcacccctttgccaaag 43359004  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    |||||||||||||||| |||||| |||||||| ||||||    
T  43359005 gttatgatcatatacacttgaatcaatgttatggttcat 43359043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 10187010 - 10186897
Alignment:
Q  75 tataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacc 174  Q
    |||| |||||||  || ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  10187010 tatatcttgatttttgagaagatgctgttgcacttgaaacctgaaaagtttaatgattatacatgtaaaactcaaagcgcatggggttgccacactaacc 10186911  T
Q  175 tttaggttcaattc 188  Q
    ||||||||| ||||    
T  10186910 tttaggttcgattc 10186897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 203 - 359
Target Start/End: Complemental strand, 21431722 - 21431565
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||||||||||||||||||||||||| |||||||||||||||| || | | |||||||| |||||| | ||||||||||||||||||  ||||||||| |    
T  21431722 caagcatttatagtgcattatatgacccttcacatgagagaaagcaccccctttgacttaaatcaatgttatggttcattaagcacccttttgccaaagg 21431623  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaag 359  Q
    ||||||||||| ||| |||||| |||||||  |||||||||  || |||||| |||||    
T  21431622 ttatgatcatacacacttgaatcaatgttaaggttcatcaagcacccatttgccaaag 21431565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 73 - 188
Target Start/End: Original strand, 16050974 - 16051089
Alignment:
Q  73 tatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaa 172  Q
    ||||||||||||||| |||||||| |||| |||||||||||| |||||| ||||||| |||||||||||||||||| || ||| |||||| |||||||||    
T  16050974 tatataacttgattgttgggaagatgctgctgcacttgaaacctgaaaaatttaatggttatgcatgtaaaactcagagcgcacggggttgccacactaa 16051073  T
Q  173 cctttaggttcaattc 188  Q
    ||||||||||| ||||    
T  16051074 cctttaggttcgattc 16051089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 28598073 - 28598192
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  28598073 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 28598172  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  28598173 ctaacctttaggttcgattc 28598192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 10186617 - 10186485
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    |||||||||||||||||||||| |||||||||||||||| || |  ||||||||||| ||| | ||||||||||||||||||  |||| |||| ||||||    
T  10186617 catttatagtgcattatatgacccttcacatgagagaaagcacccatttgacttgaaccaatgctatggttcattaagcacccctttgtcaaaggttatg 10186518  T
Q  307 atcatatacagttgaattaatgttatcgttcat 339  Q
    |||||||||| |||||| |||| ||| ||||||    
T  10186517 atcatatacacttgaatcaatgctatggttcat 10186485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 28574461 - 28574597
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  28574461 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 28574560  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  28574561 tataaccatatatacttgaatcaatgtcatggttcat 28574597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 28598473 - 28598609
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  28598473 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 28598572  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  28598573 tataaccatatatacttgaatcaatgtcatggttcat 28598609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 13654472 - 13654591
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | |||||||||||||| |||  ||||||||  |    
T  13654472 ccaagtatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagtacccttttgccaaggg 13654571  T
Q  302 ttatgatcatatacagttga 321  Q
    ||||||||||| ||| ||||    
T  13654572 ttatgatcatacacacttga 13654591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 28574062 - 28574180
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||||| |||| | |||||||| ||||||    
T  28574062 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaacttaaagcgtatggggttgccacac 28574161  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  28574162 taacctttaggttcgattc 28574180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 207 - 328
Target Start/End: Original strand, 19310981 - 19311102
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    |||||||||||||||| ||||| |||||||||||||||| || | |||||||||||||||| | ||| ||||||||||||||  ||| ||||| ||||||    
T  19310981 catttatagtgcattacatgacccttcacatgagagaaagcacccctttgacttgaatcaatgttatagttcattaagcacccttttaccaaaggttatg 19311080  T
Q  307 atcatatacagttgaattaatg 328  Q
    |||||||||| |||||| ||||    
T  19311081 atcatatacacttgaatcaatg 19311102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 13654100 - 13654218
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||| ||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||| ||| |||||||||| |||||| |||||||||| ||||||    
T  13654100 tgttagatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgcttacgcatgtaaaattcaaagcgcatggggttgccacac 13654199  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  13654200 taacctttaggttcgattc 13654218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 104 - 196
Target Start/End: Original strand, 3465272 - 3465364
Alignment:
Q  104 gcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattcctccccac 196  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| |||| |||||||    
T  3465272 gcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacactaacctttaggttcgattcgtccccac 3465364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 19310613 - 19310708
Alignment:
Q  93 aagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    |||| ||||||| ||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||| | |||||||||||||||||| ||||    
T  19310613 aagaggctgttgtacttgaaacctgaaaagtttaatggttatgcatgtgaaactcaaagcgcatggggttgcaacactaacctttaggttcgattc 19310708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 44524458 - 44524348
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| |||| |||||||||||| |||||||| ||||| ||||||||| ||||||||||| ||||||||||  ||||    
T  44524458 ttgttgtatatcttgattgttgggaagatgctgctgcacttgaaacctgaaaagtgtaatggttatgcatgcaaaactcaaagcgcatggggttgtcaca 44524359  T
Q  169 ctaacctttag 179  Q
    ||||| |||||    
T  44524358 ctaacatttag 44524348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 219 - 316
Target Start/End: Original strand, 1187991 - 1188088
Alignment:
Q  219 attatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatataca 316  Q
    ||||||||||||| |||||||||| ||||| | ||||||||||||| || | ||||||||||||| |||| |||||||||| ||||||||||||||||    
T  1187991 attatatgactctacacatgagagtaaacacccctttgacttgaattaatgttatggttcattaaacacccatttgccaaaggttatgatcatataca 1188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 35624793 - 35624900
Alignment:
Q  81 ttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttagg 180  Q
    ||||||| | |||||| |||  ||||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||  || |||||||||||||    
T  35624793 ttgattgttcggaagatgctactgcacttgaaacatgaaaaatttaatggttatgcatgtaaaactcaaagcgcgtggggttgtcatactaacctttagg 35624892  T
Q  181 ttcaattc 188  Q
    ||| ||||    
T  35624893 ttcgattc 35624900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 1187595 - 1187705
Alignment:
Q  73 tatataacttgattgatgggaagaagctgttgcacttgaaacat-gaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacacta 171  Q
    |||||||||| |||| ||| || |  ||| |||||||||||| | ||||| ||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  1187595 tatataactttattgttggaaatagactgctgcacttgaaacctagaaaaatttaatagttatgcatgtaaaactcaaagtgcatggggttgccacacta 1187694  T
Q  172 acctttaggtt 182  Q
    |||||||||||    
T  1187695 acctttaggtt 1187705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 29681355 - 29681468
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||| | |||||||| ||||||||||||||||| |||||| | ||||| |||||||||| |||||||||| |||||||||| ||| |    
T  29681355 ttgttgtatatcttgatcgttgggaagatgctgttgcacttgaaacctgaaaaatctaatggttatgcatgt-aaactcaaagcgcatggggttgccata 29681453  T
Q  169 ctaacctttaggttc 183  Q
    | |||||||||||||    
T  29681454 ccaacctttaggttc 29681468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 323
Target Start/End: Complemental strand, 35653275 - 35653173
Alignment:
Q  221 tatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagtt 319  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||   |||| |||| |||||||||||||||| ||    
T  35653275 tatatgacccttcacatgagagaaaaca-ctcatttgaattgaatcaatgatatggttcattaagcactcctttgtcaaaggttatgatcatatacactt 35653177  T
Q  320 gaat 323  Q
    ||||    
T  35653176 gaat 35653173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 69 - 183
Target Start/End: Complemental strand, 48366491 - 48366378
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||| | |||||||| | ||||||||||||||| |||||| | ||||| |||||||||| |||||||||| |||||||||| ||| |    
T  48366491 ttgttgtatatcttgatcgttgggaagatgttgttgcacttgaaacctgaaaaatctaatggttatgcatgt-aaactcaaagcgcatggggttgccata 48366393  T
Q  169 ctaacctttaggttc 183  Q
    | |||||||||||||    
T  48366392 ccaacctttaggttc 48366378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 21432072 - 21431987
Alignment:
Q  103 tgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||  ||||| |||| |||||||||| ||||| ||| ||||    
T  21432072 tgcacttgaaacctgaaaagtttaatggttatgcatgtaaaactcaaatcgcatgaggttgccacactaacttttagattcgattc 21431987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 183
Target Start/End: Complemental strand, 17415624 - 17415511
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||| |||||||||||| || ||||| | |||||| |||| ||  | |||||||||||| ||||||| |||||| |||||||| ||||||||  |||||    
T  17415624 tgttaaataacttgattgttgagaagaggttgttgcgcttgcaatgtaaaaagtttaatggttatgcacgtaaaaatcaaagtgtatggggttgtcacac 17415525  T
Q  170 taacctttaggttc 183  Q
    |||| |||||||||    
T  17415524 taacatttaggttc 17415511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 288
Target Start/End: Complemental strand, 44524069 - 44523986
Alignment:
Q  207 catttatagtgcattatatgactcttcacat--gagagaaaacatctctttgacttgaatcaacgatatggttcattaagcacc 288  Q
    |||||||||||||||||||||| ||||||||  ||| ||||||| |  ||||||||||||||| | ||||||||||||||||||    
T  44524069 catttatagtgcattatatgacccttcacatatgagggaaaacacccatttgacttgaatcaatgttatggttcattaagcacc 44523986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 10185907 - 10185973
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaat 323  Q
    ||||||||||| ||||||||||||||||||||  ||||||||| ||||| | |||||||| ||||||    
T  10185907 acttgaatcaatgatatggttcattaagcacctttttgccaaaggttataaccatatacacttgaat 10185973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 3701538 - 3701493
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaaca 248  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  3701538 caagtatttatagtgcattatgtgactcttcacatgagagaaaaca 3701493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 17414609 - 17414566
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaa 245  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  17414609 ccaagcatttatagtgcattatatgaccattcacatgagagaaa 17414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 3701451 - 3701369
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    |||||||||||   |||||||||||||||| |||||| ||||| ||| |||||| ||||| |||||| |||| ||| ||||||    
T  3701451 acttgaatcaatattatggttcattaagcatcaatttaccaaaggttgtgatcagatacacttgaatcaatgctatggttcat 3701369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 21431608 - 21431537
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatg 328  Q
    ||||||||||| | || ||||||| ||||||| |||||||||| ||||| || ||||||| |||||| ||||    
T  21431608 acttgaatcaatgttaaggttcatcaagcacccatttgccaaaggttataattatatacacttgaatcaatg 21431537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 10185832 - 10185874
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaa 245  Q
    ||||||||||||||||||||||||||  |||| ||||||||||    
T  10185832 caagcatttatagtgcattatatgaccattcatatgagagaaa 10185874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 323
Target Start/End: Original strand, 43359020 - 43359085
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaat 323  Q
    ||||||||||| | |||||||||||| |||||  ||||||||||||||| | |||||||| ||||||    
T  43359020 acttgaatcaatgttatggttcatta-gcacccttttgccaaatgttataaccatatacacttgaat 43359085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 28574619 - 28574700
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  28574619 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 28574700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 28598631 - 28598712
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  28598631 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaattgattccattattttggaaatcaccaaca 28598712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 42780341 - 42780473
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| | |||||||||||||||  | |||||||||| ||||||    
T  42780341 catttatagtgcattatatgactcttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagccaccatttgccaaaggttatg 42780440  T
Q  307 atcatatacagttgaattaatgttatcgttcat 339  Q
    |||||||||| |||||| |||||||| ||||||    
T  42780441 atcatatacacttgaatcaatgttatggttcat 42780473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 75 - 188
Target Start/End: Original strand, 42779953 - 42780066
Alignment:
Q  75 tataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacc 174  Q
    |||| |||| ||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  42779953 tatatcttgtttgttgggaagatgctgctgcacttgaaacctgaaaagtttaatgattatgcatgtaaaactcaaagcatatggggttaccacactaacc 42780052  T
Q  175 tttaggttcaattc 188  Q
    ||||||||| ||||    
T  42780053 tttaggttcgattc 42780066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 14917821 - 14917703
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  14917821 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 14917722  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  14917721 taacctttaggttcgattc 14917703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 188
Target Start/End: Original strand, 16284209 - 16284319
Alignment:
Q  78 aacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaaccttt 177  Q
    ||||| |||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | |||    
T  16284209 aacttaattgttgggaagatgctgctgcacttgaaacctgaaaagtttaatgattatgcatgtaaaactcaaagcgcatggggttgccacactacctttt 16284308  T
Q  178 aggttcaattc 188  Q
    |||||| ||||    
T  16284309 aggttcgattc 16284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 17720968 - 17720847
Alignment:
Q  67 atttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttacca 166  Q
    |||||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||    
T  17720968 atttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgcca 17720869  T
Q  167 cactaacctttaggttcaattc 188  Q
    || |||||||||||||| ||||    
T  17720868 cattaacctttaggttcgattc 17720847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 20892389 - 20892254
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||| | | ||||||||||||||||  |||| ||||||    
T  20892389 caagtatttatagtgcattatatgactcttcacacgagagaaaaca-ctcatttgatttgaatcaatgtt-tggttcattaagcacctttttggcaaatg 20892292  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||||||| |||||| |||||||| ||||||    
T  20892291 ttatgatcatatacacttgaatcaatgttatggttcat 20892254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 69 - 173
Target Start/End: Original strand, 716125 - 716229
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  716125 ttgttgtatatcttgattgttgggaagatgttgttgcacttgaaacctgaaaagtttaatggttatgcatgtaaaactcaaagcgcatggggttgccaca 716224  T
Q  169 ctaac 173  Q
    |||||    
T  716225 ctaac 716229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 14917422 - 14917286
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  14917422 caagcatttatagtgcattatatgactcttcacatgagagaaaacagctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 14917323  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  14917322 tataaccatatatacttgaatcaatgtcatggttcat 14917286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 45120551 - 45120687
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  45120551 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 45120650  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  45120651 tataaccatatatacttgaatcaatgtcatggttcat 45120687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 39196312 - 39196193
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| | || |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  39196312 ttgttatatatcttgtttgttgggaagaggatgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 39196213  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  39196212 ctaacctttaggttcgattc 39196193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 45120151 - 45120264
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    |||||||||  ||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  45120151 tgttatatatattgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 45120250  T
Q  170 taacctttaggttc 183  Q
    ||||||||||||||    
T  45120251 taacctttaggttc 45120264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 17720566 - 17720430
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  17720566 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 17720467  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | || ||| ||||| || ||||||    
T  17720466 tataaccatatatacttcaatcaatgtcatggttcat 17720430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 202 - 338
Target Start/End: Complemental strand, 30283491 - 30283355
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||   ||||||||||||||||||  |||||||||      
T  30283491 ccaaacatttatagtgcattatatgactcttcacatgaaagaaaacacccctttaacttgaatcaatattatggttcattaagcacccttttgccaaaga 30283392  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttca 338  Q
    |||| | |||||| | |||||| ||||| || |||||    
T  30283391 ttataaccatatatacttgaatcaatgtcatggttca 30283355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 202 - 312
Target Start/End: Original strand, 716417 - 716527
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| ||||||||||||||||||||||  |||| ||||||||||||||| |||||||||||||||| | || ||| |||||| ||||  ||||||||| |    
T  716417 ccaaacatttatagtgcattatatgacctttcatatgagagaaaacatccctttgacttgaatcaatgttacggtccattaaacacctttttgccaaagg 716516  T
Q  302 ttatgatcata 312  Q
    |||||||||||    
T  716517 ttatgatcata 716527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 16286003 - 16286081
Alignment:
Q  221 tatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaa 299  Q
    |||||||| ||||||||||||||||||| |  ||| |||| |||||||| ||| ||||||||| ||||| ||| |||||    
T  16286003 tatatgacccttcacatgagagaaaacacccatttaacttcaatcaacgttatagttcattaaacaccattttaccaaa 16286081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 20892277 - 20892211
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaat 323  Q
    ||||||||||| | ||||||||||||| |||  | ||||||||||| ||||||||||||| ||||||    
T  20892277 acttgaatcaatgttatggttcattaatcactcacttgccaaatgtcatgatcatatacacttgaat 20892211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 30283296 - 30283250
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||    
T  30283296 aacttttggttctaaaatgattccattattttggaaatcaccaacat 30283250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 442
Target Start/End: Complemental strand, 17720081 - 17720000
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||| |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  17720081 ttccaatgtatatgaatagttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 17720000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 14917228 - 14917183
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  14917228 aacttttggttctaaagtgattccattattttggaaatcaccaaca 14917183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 30283869 - 30283809
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatga 130  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||    
T  30283869 ttgttatatatcttgtttgttgggaaga-gctgctgcacttgaaacctgaaatgtttaatga 30283809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 42780551 - 42780596
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  42780551 aacttttggttctaaagtgattccattattttggaaatcaccaaca 42780596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 45120741 - 45120790
Alignment:
Q  393 ttataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||| ||||||| |||||||| ||||| |||||||| ||||||||||||||    
T  45120741 ttacaacttttaattctaaagtgattccattattttggaaatcaccaaca 45120790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 203 - 433
Target Start/End: Complemental strand, 54859218 - 54858987
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||||| | |||||||||||||||| | |||||||||| |    
T  54859218 caagcatttatagtgcattatatgacccttcacatgagagaaaacaccccctttgacttgaatcaatgttatggttcattaagcatccatttgccaaagg 54859119  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataactt 401  Q
    ||||||||||||||| |||||| ||||||||  ||||| ||  || | |||| ||||| ||||||| ||||| ||| ||||| || || | ||| || ||    
T  54859118 ttatgatcatatacacttgaatcaatgttatgtttcattaagcacccttttgccaaaggttccaatgtatatgaatgattccaatgaagagttacaattt 54859019  T
Q  402 ttgattctaaaatgatttcattatttcggaaa 433  Q
    ||| || |||| |||||  ||||||| |||||    
T  54859018 ttggttgtaaagtgattctattattttggaaa 54858987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 208 - 339
Target Start/End: Complemental strand, 3409643 - 3409512
Alignment:
Q  208 atttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatga 307  Q
    ||||||||||||||||||||| |||||||||||||||||||   |||||||||||||||| | |||| |||||||||||||  ||||||||| |||||||    
T  3409643 atttatagtgcattatatgacccttcacatgagagaaaacactcctttgacttgaatcaatgctatgattcattaagcacccctttgccaaaggttatga 3409544  T
Q  308 tcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||| |||||| |||||||| ||||||    
T  3409543 tcatatacacttgaatcaatgttatggttcat 3409512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 202 - 332
Target Start/End: Complemental strand, 32429334 - 32429204
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| |  ||| |||||||||||||  |||| |||| |    
T  32429334 ccaagcatttatagtgcattatatgactcttcaaatgagagaaaacacccctttgacttgaatcaatgccatgattcattaagcacccctttgtcaaagg 32429235  T
Q  302 ttatgatcatatacagttgaattaatgttat 332  Q
    ||||||||||||||| |||||| ||||||||    
T  32429234 ttatgatcatatacacttgaatcaatgttat 32429204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 3415592 - 3415473
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| | ||||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||| || |||||    
T  3415592 ttgttgtatatcttgattgttgggaagatgttgttgcacttgaaacctgaaaagtttaattatcatgcatgtaaaactcaaagcgcatgggattgccaca 3415493  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||||||||    
T  3415492 ctaacctttaggttcaattc 3415473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 18716250 - 18716369
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| |||| |||||||||||| |||||||||||||| | ||||||||||||||||||| |||||||||| |||||    
T  18716250 ttgttgtatatcttgattgttgggaagatgctgctgcacttgaaacctgaaaagtttaatggtaatgcatgtaaaactcaaagcgcatggggttgccaca 18716349  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  18716350 ctaacctttaggttcgattc 18716369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 18736923 - 18737042
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||  ||| |    
T  18736923 ttgttgtatatcttgattgttgggaagatgctgctgcacttgaaacttgaaaagtttaatggttatgcatgtaaaactcaaagcgcatgaggtagccaaa 18737022  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||||||||    
T  18737023 ctaacctttaggttcaattc 18737042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 35095792 - 35095911
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  35095792 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 35095891  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  35095892 ctaacctttaggttcgattc 35095911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 35091079 - 35091215
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  35091079 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 35091178  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  35091179 tataaccatatatacttgaatcaatgtcatggttcat 35091215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 35096192 - 35096328
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  35096192 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 35096291  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  35096292 tataaccatatatacttgaatcaatgtcatggttcat 35096328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 73 - 188
Target Start/End: Original strand, 47071176 - 47071292
Alignment:
Q  73 tatataacttgattgatgggaagaagctgttgcactt-gaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacacta 171  Q
    ||||||||||||||| | | |||| | |||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  47071176 tatataacttgattgttagaaagatgttgttgcactttgaaacctgaaaagtttaatggttatgcatgtaaaactcaaagcgcatggggttgccacacta 47071275  T
Q  172 acctttaggttcaattc 188  Q
    |||||||||||| ||||    
T  47071276 acctttaggttcgattc 47071292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 18670605 - 18670724
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||  |||| |||||||||||| |||||||||||||| |||||||||||||| |||||| |||||| ||| |||||    
T  18670605 ttgttgtatatcttgattgttgggaagttgctgctgcacttgaaacctgaaaagtttaatggttatgcatgtaaaattcaaagcgcatggagttgccaca 18670704  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  18670705 ctaacctttaggttcgattc 18670724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 75 - 188
Target Start/End: Complemental strand, 32429718 - 32429605
Alignment:
Q  75 tataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacc 174  Q
    |||| |||||||| |||||||| |  | |||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  32429718 tatatcttgattgttgggaagatgtggctgcacttgaaacctgaaaattttaatggttatgcatgtaaaactcaaagcgcatggggttgccacactaacc 32429619  T
Q  175 tttaggttcaattc 188  Q
    ||||||||| ||||    
T  32429618 tttaggttcgattc 32429605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 207 - 373
Target Start/End: Original strand, 47071553 - 47071725
Alignment:
Q  207 catttatagtgcattatatgactcttcacat------gagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaat 300  Q
    |||||||||| ||||||||||| ||||||||      |||||||||||  | ||||||||||||||| |  ||||||||||||||| | ||||||||||     
T  47071553 catttatagtacattatatgacccttcacatgaacatgagagaaaacacttttttgacttgaatcaatgcaatggttcattaagcatccatttgccaaag 47071652  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatat 373  Q
    |||||||||||||||| |||||| |||||||| |||||| ||  || |||||| ||||| ||||||| |||||    
T  47071653 gttatgatcatatacacttgaatcaatgttatggttcattaagcacccatttgccaaaggttccaatgtatat 47071725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 383
Target Start/End: Complemental strand, 14643781 - 14643605
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |  ||||||||||||||| | || |||||||||| |||   |||| |||||||||||    
T  14643781 catttatagcgcattatatgacccttcacatgatagaaaacacccatttgacttgaatcaatgctaaggttcattaaacactcctttgtcaaatgttatg 14643682  T
Q  307 atcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcc 383  Q
    |||||||||| |||||| |||||||  |||||| ||  || | |||| ||||| ||||||| ||||| ||| |||||    
T  14643681 atcatatacacttgaatcaatgttaaggttcattaagcacccttttgccaaaggttccaatgtatatgaatgattcc 14643605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 35090678 - 35090798
Alignment:
Q  68 tttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccac 167  Q
    ||||||||| | |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||| | |||||| |||||||| ||||    
T  35090678 tttgttataaatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaatttaaagtgtatggggttgccac 35090777  T
Q  168 actaacctttaggttcaattc 188  Q
    |||||||||||||||| ||||    
T  35090778 actaacctttaggttcgattc 35090798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 3425139 - 3425021
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    |||| |||| |||||||| ||||||||   ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| ||||||| ||  |||||    
T  3425139 tgttgtatatcttgattgttgggaagattgtgttgcacttgaaacctgaaaagtttaattattatgcatgcaaaactcaaagcgcatgggattgtcacac 3425040  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  3425039 taacctttaggttcgattc 3425021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 30019888 - 30019763
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || |  ||||||||||||| | | ||||||||||||||||||  ||||||||| |    
T  30019888 ccaaacatttatagtgcattatatgacccttcacatgagagaaagcacccatttgacttgaatc-atgttatggttcattaagcacctttttgccaaagg 30019790  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    ||||||||||| ||| |||||| ||||    
T  30019789 ttatgatcatacacacttgaatcaatg 30019763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 183
Target Start/End: Complemental strand, 14646707 - 14646594
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||||||| | ||| ||||||| |||||||||||  |||||||||||||| |||||||||||||||| ||||  ||||||||| ||||||    
T  14646707 tgttatatatcttgattgttaggatgaagctgctgcacttgaaatctgaaaagtttaatggttatgcatgtaaaacttaaagctcatggggtttccacac 14646608  T
Q  170 taacctttaggttc 183  Q
    | ||||||||||||    
T  14646607 tgacctttaggttc 14646594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 18670993 - 18671130
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| || |  ||||||||||||||| | ||||||||||||||| |   ||| ||||| |    
T  18670993 ccaagcatttatagtccattatatgacccttcacatgagagaaagcacccatttgacttgaatcaatgctatggttcattaagccctcttttaccaaagg 18671092  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||  ||||||||| |||||| |||||||| ||||||    
T  18671093 ttatcttcatatacacttgaatcaatgttatggttcat 18671130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 80 - 177
Target Start/End: Complemental strand, 30020279 - 30020182
Alignment:
Q  80 cttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaaccttt 177  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||| |||||||||||||| | ||||||||    
T  30020279 cttgattgttgagaagatgctgttgcacttgaaacctgaaaagttcaatggttatgcatgtaaaactcaaagcgcatggggttaccatattaaccttt 30020182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 202 - 339
Target Start/End: Complemental strand, 25618341 - 25618211
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||||||||||||||||||||||||||       ||||||||||||| |||| ||||||||||||| | |||| ||||||||||| | | |||| ||| |    
T  25618341 ccaagcatttatagtgcattatatgac-------atgagagaaaacacctctgtgacttgaatcaatgttatgattcattaagcatccagttgcgaaagg 25618249  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||||||| |||||| |||||||| ||||||    
T  25618248 ttatgatcatatacacttgaatcaatgttatggttcat 25618211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 34279551 - 34279425
Alignment:
Q  205 agcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgtt 303  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| | ||||||| ||| | ||||  ||| ||||| |||    
T  34279551 agcatttatagtgcattatatgacccttcacatgagagaaaaca-ctcatttgacttgaatcaatgttatggttaattgaacacccttttaccaaaggtt 34279453  T
Q  304 atgatcatatacagttgaattaatgtta 331  Q
    ||||||||||||| || ||| |||||||    
T  34279452 atgatcatatacacttaaatcaatgtta 34279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 34128655 - 34128563
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggtt 162  Q
    ||||||||| |||||||| ||||||||  ||| |||||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||    
T  34128655 tgttatatatcttgattgttgggaagagactgctgcacttgaaaccttaaaagtttaatggttatgcatgtaaaactcaaagtgcatagggtt 34128563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 203 - 367
Target Start/End: Original strand, 22118869 - 22119035
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaa--catctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaat 300  Q
    ||||||||||||||  |||||||||| |||||||||||||||||  || | ||||||||||||| ||  |||||||||||||||||||  |||||| ||     
T  22118869 caagcatttatagtatattatatgacccttcacatgagagaaaatacacccctttgacttgaatgaataatatggttcattaagcacccctttgccgaag 22118968  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaat 367  Q
    |||  ||||||||||| |||||| |||| ||  |||||| ||  || |||||| ||||| |||||||    
T  22118969 gttgcgatcatatacacttgaatcaatgctaaggttcattaagcacccatttgccaaaggttccaat 22119035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 442
Target Start/End: Complemental strand, 34279440 - 34279254
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtca 356  Q
    |||| |||||| | || |||| |||||||||  |||||||||| ||||| |||||||||| |||||| |||| ||  |||||| ||  || |||||||||    
T  34279440 acttaaatcaatgttaaggtttattaagcactcatttgccaaaggttataatcatatacacttgaatcaatgctaaggttcattaagcacccatttgtca 34279341  T
Q  357 aa-gattccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    || ||||| ||| ||||| ||| ||||| || || ||||  |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  34279340 aaagattctaatgtatatgaatgattcccatgaagaattgaaacttttggttctaaagtgattccattattttggaaatcaccaaca 34279254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 34279932 - 34279812
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagttt-aatgattatgcatgtaaaactcaaagtgcatggggttaccac 167  Q
    |||||||||| |||| |||  ||||||| || | |||||||||||| ||||| |||| |||| ||||||||||||||||||||| ||||||| ||  |||    
T  34279932 ttgttatatatcttgtttgtagggaagaggcggctgcacttgaaacctgaaacgttttaatggttatgcatgtaaaactcaaagcgcatgggattgtcac 34279833  T
Q  168 actaacctttaggttcaattc 188  Q
    |||||||||||| ||| ||||    
T  34279832 actaacctttagcttcgattc 34279812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 34128300 - 34128218
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagc 285  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||| ||||||||||||||| | ||| |||||||||||    
T  34128300 caagcatttatagtgcattatatgacccttcacattagagaaaaca-ctcatttgacttgaatcaatgttatagttcattaagc 34128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 18716694 - 18716780
Alignment:
Q  253 tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||||||| ||||||||||||||||| |   ||| ||||| |||||||||||||||| |||||| |||||||| ||||||    
T  18716694 tttgacttgaatcaatgatatggttcattaagctctcttttaccaaaagttatgatcatatacacttgaatcaatgttatggttcat 18716780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 18737367 - 18737453
Alignment:
Q  253 tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||||||| ||||||||||||||||| |   ||| ||||| |||||||||||||||| |||||| |||||||| ||||||    
T  18737367 tttgacttgaatcaatgatatggttcattaagctctcttttaccaaaagttatgatcatatacacttgaatcaatgttatggttcat 18737453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 25618234 - 25618163
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatg 328  Q
    ||||||||||| | ||||||||||||||||||  ||||||||||||||| | |||||||| |||||| ||||    
T  25618234 acttgaatcaatgttatggttcattaagcacccttttgccaaatgttataaccatatacacttgaatcaatg 25618163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 18671107 - 18671189
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||| | ||||||||||||||||||| ||||||||| ||||| | |||||||| || ||| ||||| || ||||||    
T  18671107 acttgaatcaatgttatggttcattaagcaccattttgccaaaggttataaccatatacacttaaatcaatgtcatggttcat 18671189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 54859525 - 54859472
Alignment:
Q  140 taaaactcaaagtgcatggggttaccacactaacctttaggttcaattcctccc 193  Q
    |||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||    
T  54859525 taaaactcaaagcgcatggggttgccacactaacctttatgttcaattcgtccc 54859472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 3424745 - 3424705
Alignment:
Q  208 atttatagtgcattatatgactcttcacatgagagaaaaca 248  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  3424745 atttatagtgcattatatgacccttcacatgagagaaaaca 3424705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 34602061 - 34601967
Alignment:
Q  220 ttatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatata 314  Q
    |||||||||  ||||||||||| |||||| ||| ||||||||||||||| | ||| ||||||||| || | ||||| |||| ||||||||||||||    
T  34602061 ttatatgaccattcacatgagaaaaaaca-ctcatttgacttgaatcaatgctatagttcattaaacatccatttgtcaaaggttatgatcatata 34601967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 18716757 - 18716839
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||| | ||||||||||||||||| | || |||||| ||||| | |||||||| |||||| ||||| || ||||||    
T  18716757 acttgaatcaatgttatggttcattaagcactatttggccaaaggttataaccatatacacttgaatcaatgtcatggttcat 18716839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 32429220 - 32429154
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaat 323  Q
    ||||||||||| | |||| |||||||||||||  ||||||||||||||| | |||||||| ||||||    
T  32429220 acttgaatcaatgttatgattcattaagcacccttttgccaaatgttataaccatatacacttgaat 32429154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Complemental strand, 3424300 - 3424217
Alignment:
Q  256 gacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||| |||||| | ||||||||||||||||||  ||||||||| ||||| | |||| ||| |||||| ||||| || ||||||    
T  3424300 gacttaaatcaatgttatggttcattaagcacccttttgccaaaggttataaccatacacatttgaatcaatgtcatggttcat 3424217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 18737430 - 18737512
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||| | ||||||||||||||||| | || |||||| ||||| |  ||||||| |||||| ||||| || ||||||    
T  18737430 acttgaatcaatgttatggttcattaagcacaatttagccaaaggttataacaatatacacttgaatcaatgtcatggttcat 18737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 35091237 - 35091318
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  35091237 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 35091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 2e-41; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 203 - 444
Target Start/End: Complemental strand, 43956890 - 43956649
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||| | |||| |||||||||||||  ||||||||| |    
T  43956890 caagcatttatagtgcattatatgactcttcacatgagagaaagca-ctcatttgacttgaatcaatgctatgattcattaagcacctttttgccaaagg 43956792  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataactt 401  Q
    |||| |||||||||| |||||| ||||| |  |||||| ||  ||  ||||| ||||||||||||| ||||| ||  ||| | || || | ||| ||||     
T  43956791 ttataatcatatacatttgaatcaatgtaaatgttcattaagcacctatttgccaaagattccaatgtatatgaaagatttccatgaagagttacaactc 43956692  T
Q  402 ttgattctaaaatgatttcattatttcggaaatcaccaacatt 444  Q
    ||||||||||| ||||| ||||||||   ||||||||||||||    
T  43956691 ttgattctaaagtgattccattattttaaaaatcaccaacatt 43956649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 188
Target Start/End: Complemental strand, 18609064 - 18608949
Alignment:
Q  73 tatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaa 172  Q
    ||||||||||||||| |||||||| |||| |||||||||||| |||||||||| ||| |||||||||||||||||||||  ||||||||| |||||||||    
T  18609064 tatataacttgattgttgggaagatgctgctgcacttgaaacctgaaaagtttgatggttatgcatgtaaaactcaaagcacatggggttgccacactaa 18608965  T
Q  173 cctttaggttcaattc 188  Q
    ||||||||||||||||    
T  18608964 cctttaggttcaattc 18608949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 202 - 332
Target Start/End: Complemental strand, 10341008 - 10340878
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||| | |||| |||||||||||||  |||| |||| |    
T  10341008 ccaagcatttatggtgcattatatgactcttcacatgagaaaaagcacctctttgacttgaatcaatgctatgattcattaagcacccttttgtcaaagg 10340909  T
Q  302 ttatgatcatatacagttgaattaatgttat 332  Q
    ||||||||||||||| |||||| ||||||||    
T  10340908 ttatgatcatatacacttgaatcaatgttat 10340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 14315351 - 14315232
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||||||||  ||| ||| ||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  14315351 ttgttatatattttgtttgttgggaagaagctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 14315252  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  14315251 ctaacctttaggttcgattc 14315232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 26982316 - 26982197
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  26982316 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 26982217  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  26982216 ctaacctttaggttcgattc 26982197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 202 - 367
Target Start/End: Complemental strand, 18608690 - 18608526
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| | ||||||||||||||||||  ||||||||| |    
T  18608690 ccaaacatttgtagtgcattatatgac-cttcacatgagagaaaacacccctttaacttgaatcaatgttatggttcattaagcacccctttgccaaagg 18608592  T
Q  302 ttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaat 367  Q
    |||||| |||||||| |||||| | || ||| |||||||||  || | |||| ||||||| |||||    
T  18608591 ttatgaacatatacacttgaatcactgctatggttcatcaagcacccctttgccaaagatcccaat 18608526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 14314951 - 14314815
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  14314951 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 14314852  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  14314851 tataaccatatatacttgaatcaatgtcatggttcat 14314815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 14318655 - 14318519
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  14318655 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 14318556  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  14318555 tataaccatatatacttgaatcaatgtcatggttcat 14318519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 26987029 - 26986893
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  26987029 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 26986930  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  26986929 tataaccatatatacttgaatcaatgtcatggttcat 26986893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 34108395 - 34108531
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  34108395 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 34108494  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  34108495 tataaccatatatacttgaatcaatgtcatggttcat 34108531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 34107993 - 34108112
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||| |||||| | |||||||| |||||    
T  34107993 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaaatcaaagcgtatggggttgccaca 34108092  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  34108093 ctaacctttaggttcgattc 34108112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 14319035 - 14318936
Alignment:
Q  89 tgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| ||||    
T  14319035 tgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacactaacctttaggttcgattc 14318936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 359
Target Start/End: Complemental strand, 25953216 - 25953058
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgcc-aaat 300  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| |  |||||||| ||||||   |||||||||||||||| |  |||||| ||||    
T  25953216 ccaaacatttatagtgcattatatgaccattcacatgagagaaaacacccatttgacttaaatcaattttatggttcattaagcatccttttgccaaaat 25953117  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaag 359  Q
    |||||||||||||||| |||||| ||| |||  |||||||||  ||||| ||| |||||    
T  25953116 gttatgatcatatacacttgaatcaatattaaggttcatcaagcactcaattgccaaag 25953058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 18494216 - 18494081
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  18494216 caagcatttatagtgcattatatgactcttcacatgagagaaagcacct-tttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 18494118  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  18494117 tataaccatatatacttgaatcaatgtcatggttcat 18494081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 207 - 339
Target Start/End: Complemental strand, 26981911 - 26981779
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| |||||     
T  26981911 catttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggttata 26981812  T
Q  307 atcatatacagttgaattaatgttatcgttcat 339  Q
    | | |||| | |||||| ||||| || ||||||    
T  26981811 accgtatatacttgaatcaatgtcatggttcat 26981779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 26987430 - 26987310
Alignment:
Q  68 tttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccac 167  Q
    ||||||||||| |||| |||  ||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||||| |||| | ||| |||| ||||    
T  26987430 tttgttatatatcttgtttgtagggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaacttaaagcgtatgtggttgccac 26987331  T
Q  168 actaacctttaggttcaattc 188  Q
    |||||||||||||||| ||||    
T  26987330 actaacctttaggttcgattc 26987310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 25953599 - 25953490
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| ||| |||| ||||||||  ||  |||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||| |||||    
T  25953599 ttgttgtatatcttaattgttgggaagagactactgcacttgaaacctgaaaagtttgatggttaagcatgtaaaactcaaagtgcatggggttgccaca 25953500  T
Q  169 ctaaccttta 178  Q
    ||||||||||    
T  25953499 ctaaccttta 25953490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 43957278 - 43957170
Alignment:
Q  80 cttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttag 179  Q
    |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||| |||||| | ||||||||  |||||||||||||||    
T  43957278 cttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaattcaaagcgtatggggttgtcacactaacctttag 43957179  T
Q  180 gttcaattc 188  Q
    |||| ||||    
T  43957178 gttcgattc 43957170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 207 - 382
Target Start/End: Original strand, 1781986 - 1782158
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    ||||||||||||| |||| |||  |||||||||||||||| |    ||||||||||||||| | |||||||||||||||||  |||| | |||||||       
T  1781986 catttatagtgcagtatacgacctttcacatgagagaaaatactattttgacttgaatcaatgttatggttcattaagcacgcattttctaaatgtt--- 1782082  T
Q  307 atcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattc 382  Q
    |||||||||| |||||| |||||||| |||||| ||  ||| ||||| ||||| |||||||| |||| ||| ||||    
T  1782083 atcatatacacttgaatcaatgttatggttcattaatcactgatttgccaaaggttccaatacatatgaatgattc 1782158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 10341385 - 10341289
Alignment:
Q  80 cttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctt 176  Q
    |||||||| |||||||| |||  |||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || ||| |||||||||    
T  10341385 cttgattgttgggaagatgctactgcatttgaaacttgaaaagttcaatgattatgcatgtaaaactcaaagcgcatgggattgccatactaacctt 10341289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 18884829 - 18884947
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||||||| | | || | | ||||||||||| ||  |||||||||||| | |||||||  |||||||||||  | |||||||| ||||||    
T  18884829 tgttatatatcttgattgtttgaaaaaggatgttgcacttggaatctgaaaagtttaacggttatgcacataaaactcaaaacgtatggggttgccacac 18884928  T
Q  170 taacctttaggttcaattc 188  Q
    |||| ||||||||| ||||    
T  18884929 taacatttaggttcgattc 18884947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 10340743 - 10340696
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaacatt 444  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  10340743 aacttttggttctaaagtgattccattatttgggaaatcaccaacatt 10340696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 14318461 - 14318416
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  14318461 aacttttggttctaaagtgattccattattttggaaatcaccaaca 14318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 18494023 - 18493978
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  18494023 aacttttggttctaaattgattccattattttggaaatcaccaaca 18493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 26981721 - 26981676
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26981721 aacttttggttctaaagtgattccattattttggaaatcaccaaca 26981676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 26986835 - 26986790
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  26986835 aacttttggttctaaagtgattccattattttggaaatcaccaaca 26986790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 34108553 - 34108634
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  34108553 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 34108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 203 - 442
Target Start/End: Complemental strand, 13556344 - 13556105
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||| | |||| |||||||||||||  ||||||||| ||    
T  13556344 caagcatttatagtgcattatatgactcttcacatgagagaaagcacccatttgacttgaatcaatgctatgattcattaagcacctttttgccaaaggt 13556245  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataacttt 402  Q
    ||| |||||||||| |||||| ||||  |  |||||| ||  ||  ||||| ||||| ||||||| ||||| ||  ||||| || || | ||| |||| |    
T  13556244 tataatcatatacacttgaatcaatgcaaatgttcattaagcacctatttgccaaaggttccaatgtatatgaaagattcccatgaagagttacaactct 13556145  T
Q  403 tgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    || || |||| ||||| |||||||| ||||||||||||||    
T  13556144 tggttttaaagtgattccattattttggaaatcaccaaca 13556105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 332
Target Start/End: Original strand, 2023118 - 2023246
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| | |||| |||||||| |||| ||||| |||| ||    
T  2023118 caagcatttatagtgcattatatgactcttcacatgagagaaagcacc-ctttgacttgaatcaatgttatgattcattaaacacccatttgtcaaaggt 2023216  T
Q  303 tatgatcatatacagttgaattaatgttat 332  Q
    |||||||||||||| |||||| ||||||||    
T  2023217 tatgatcatatacacttgaatcaatgttat 2023246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 9877980 - 9877860
Alignment:
Q  68 tttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccac 167  Q
    ||||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||| ||||    
T  9877980 tttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagtgtatggggttgccac 9877881  T
Q  168 actaacctttaggttcaattc 188  Q
    |||||||||||||||| ||||    
T  9877880 actaacctttaggttcgattc 9877860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 9872864 - 9872745
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||||| |||||||| |||||    
T  9872864 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagtgtatggggttgccaca 9872765  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  9872764 ctaacctttaggttcgattc 9872745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 39908722 - 39908841
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  39908722 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 39908821  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  39908822 ctaacctttaggttcgattc 39908841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 69 - 183
Target Start/End: Original strand, 43378201 - 43378315
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||||| || |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||  ||||    
T  43378201 ttgttgtatatcttgattgttgggaagaagttgctgcacttgaaacttgaaaagtttaatggttatgcatgtaaaactcaaagcgcatggggttgtcaca 43378300  T
Q  169 ctaacctttaggttc 183  Q
    ||||| |||||||||    
T  43378301 ctaacatttaggttc 43378315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 207 - 374
Target Start/End: Complemental strand, 43402169 - 43402000
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    |||||||||||||||||||||  ||||| |||| ||||||||||  ||||| | ||||||| | |||||||||||||| | ||||||| |||| |||||     
T  43402169 catttatagtgcattatatgatccttcatatgaaagaaaacatcaatttgattcgaatcaatgttatggttcattaagtatcaatttgtcaaaagttata 43402070  T
Q  307 atcatata--cagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatata 374  Q
    ||||||||  | ||||||| ||||||| ||||||| ||| ||||||||||||||  ||||||||||||||    
T  43402069 atcatatacgctgttgaatcaatgttaacgttcattaaacactcatttgtcaaatgttccaatatatata 43402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 328
Target Start/End: Complemental strand, 35368941 - 35368816
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| | |||| |||||||| ||||  |||  ||||||    
T  35368941 caagcatttatagtgcattatatgacttttcacatgagagaaaaca-ctcatttgacttgaatcaatgttatgattcattaaacacctttttatcaaatg 35368843  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    ||||||||||||||| |||||| ||||    
T  35368842 ttatgatcatatacacttgaatcaatg 35368816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 9872464 - 9872328
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  9872464 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 9872365  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  9872364 tataaccatatatacttgaatcaatgtcatggttcat 9872328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 9877579 - 9877443
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  9877579 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 9877480  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  9877479 tataaccatatatacttgaatcaatgtcatggttcat 9877443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 39904009 - 39904145
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||| | ||||||||| ||    
T  39904009 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagcactattttgccaaaggt 39904108  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  39904109 tataaccatatatacttgaatcaatgtcatggttcat 39904145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 39909122 - 39909258
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  39909122 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 39909221  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  39909222 tataaccatatatacttgaatcaatgtcatggttcat 39909258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 39903610 - 39903728
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| ||| |||| |||| ||||||||||||  |||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  39903610 tgttatatatcttgtttgttggaaagaggctgctgcacttgaaacccgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 39903709  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  39903710 taacctttaggttcgattc 39903728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 2022738 - 2022846
Alignment:
Q  80 cttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttag 179  Q
    |||||||| ||  |||| |||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||| ||| ||||||||||||    
T  2022738 cttgattgttgtaaagatgctgctgcacttgaaacctgaaaagtttaatggttatgcatgtaaaactcaaagcgcatgaggttgccatactaacctttag 2022837  T
Q  180 gttcaattc 188  Q
    |||| ||||    
T  2022838 gttccattc 2022846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 13556744 - 13556637
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| | |  |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  13556744 tgttatatatcttgtttgttgggaagaggttactgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 13556645  T
Q  170 taaccttt 177  Q
    ||||||||    
T  13556644 taaccttt 13556637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 202 - 323
Target Start/End: Complemental strand, 43540821 - 43540703
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| || ||  |||||||||| |||| | ||||||||||||||||||  |||| |||| |    
T  43540821 ccaagtatttatagtgcattatatgacccttcacatgagagaacac-tca-tttgacttgagtcaatgttatggttcattaagcacc-ttttgtcaaagg 43540725  T
Q  302 ttatgatcatatacagttgaat 323  Q
    ||||||||||||||| ||||||    
T  43540724 ttatgatcatatacacttgaat 43540703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 35369311 - 35369223
Alignment:
Q  103 tgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcat---ggggttaccacactaacctttaggttcaattc 188  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||   |||||| ||||||||| |||||||||| ||||    
T  35369311 tgcacttgaaacctgaaaagtttaatggttatgcatgtaaaactcaaagcgcatatgggggttgccacactaatctttaggttcgattc 35369223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 25183892 - 25183981
Alignment:
Q  103 tgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatg----gggttaccacactaacctttaggttcaattc 188  Q
    |||||||||||| |||||  |||||||||||||||||||||||| |||| |||||    ||||| |||||||| ||||||||||| ||||    
T  25183892 tgcacttgaaacctgaaatctttaatgattatgcatgtaaaactgaaagcgcatgggccgggttgccacactatcctttaggttcgattc 25183981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 4555784 - 4555829
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaaca 248  Q
    ||||||||||||||||||||||||||| || |||||||||||||||    
T  4555784 caagcatttatagtgcattatatgactattaacatgagagaaaaca 4555829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 373
Target Start/End: Complemental strand, 35368828 - 35368712
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtca 356  Q
    ||||||||||| | || |||||||||||||||  |||| |||| ||||| |||||||||| || ||| |||| ||  |||||| ||  ||||||||| ||    
T  35368828 acttgaatcaatgctaaggttcattaagcacctctttgtcaaaggttataatcatatacacttaaatcaatgctaaggttcattaagcactcatttgcca 35368729  T
Q  357 aagattccaatatatat 373  Q
    ||| ||||||| |||||    
T  35368728 aaggttccaatgtatat 35368712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 385 - 442
Target Start/End: Original strand, 4555961 - 4556018
Alignment:
Q  385 ataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||| ||||||| |||||||| ||||| |||||||| ||||||||||||||    
T  4555961 ataaaaagttacaacttttaattctaaagtgattccattattttggaaatcaccaaca 4556018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 2023230 - 2023312
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||| | |||| |||||||||||||  ||||||||| ||||| | |||| ||| |||||| ||||| || ||||||    
T  2023230 acttgaatcaatgttatgattcattaagcacccttttgccaaaggttataaccatacacacttgaatcaatgtcatggttcat 2023312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 2024422 - 2024467
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  2024422 aacttttggttctaaagtgattccattattttggaaatcaccaaca 2024467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 9872270 - 9872225
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  9872270 aacttttggttctaaagtgattccattattttggaaatcaccaaca 9872225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 9877385 - 9877340
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  9877385 aacttttggttctaaagtgattccattattttggaaatcaccaaca 9877340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 39909312 - 39909361
Alignment:
Q  393 ttataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  39909312 ttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 39909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 204 - 323
Target Start/End: Complemental strand, 21936725 - 21936606
Alignment:
Q  204 aagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgtt 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | ||||||| ||||||||||  ||||||||| |||    
T  21936725 aagcatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggtttattaagcacctttttgccaaaggtt 21936626  T
Q  304 atgatcatatacagttgaat 323  Q
    ||||||||||||| ||||||    
T  21936625 atgatcatatacacttgaat 21936606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 24509268 - 24509149
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||||||| |||||||| |||| |||||||||||| | |||||||||||| ||||||||||||||||||||  |||||||||| ||| |    
T  24509268 ttgttatatatcttgattgttgggaagaggctgctgcacttgaaacttcaaaagtttaatggttatgcatgtaaaactcaaaacgcatggggttgccata 24509169  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  24509168 ctaacctttaggttcgattc 24509149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 21275538 - 21275656
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  21275538 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 21275637  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  21275638 taacctttaggttcgattc 21275656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 21275937 - 21276073
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  21275937 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 21276036  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  21276037 tataaccatatatacttgaatcaatgtcatggttcat 21276073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 20752556 - 20752430
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||||| ||| ||    
T  20752556 tgttatatatcttgtttgttggga-gaggctgttgcacttgaaacctgaaatgtttaatgattatgcatgtaaaactcaaagcacatggggttgccatac 20752458  T
Q  170 taacctttaggttcaattcctccccaca 197  Q
    |||||||||||||| ||||  |||||||    
T  20752457 taacctttaggttcgattcgcccccaca 20752430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 24509467 - 24509586
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||||| | ||||||||||||||| | |||||||||||| ||||||||||||||||||||  |||||||||| ||| |    
T  24509467 ttgttgtatatcttgattgttgggaagaggttgttgcacttgaaaccttaaaagtttaatggttatgcatgtaaaactcaaatcgcatggggttgccata 24509566  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  24509567 ctaacctttaggttcgattc 24509586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 24509864 - 24510024
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |  ||||||||||||||| | ||||||||||||| |||   |||| |||||||    
T  24509864 caagcatttatagtgcattatatgaaccttcacatgagagaaaacacccatttgacttgaatcaatgttatggttcattaaacacacttttgtcaaatgt 24509963  T
Q  303 tatg---atcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagat 361  Q
    ||||   |||||||||| ||||||||||||||  ||||||  ||||| | ||||||||||||    
T  24509964 tatgatcatcatatacacttgaattaatgttaaggttcat-taatacccttttgtcaaagat 24510024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 21937729 - 21937855
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| |||||||||||| ||||||||| ||||||||||||||||| | | |||||||||||||||| |  |||||||||||| ||||  ||||||||| |    
T  21937729 ccaaacatttatagtgcgttatatgacccttcacatgagagaaaatacccctttgacttgaatcaatgtgatggttcattaaacacccttttgccaaagg 21937828  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    ||||||||||||||| |||||| ||||    
T  21937829 ttatgatcatatacacttgaatcaatg 21937855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 202 - 328
Target Start/End: Complemental strand, 24508901 - 24508775
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||| |||||| ||| ||| ||||||| |||| |||||||||||||| | |||||||||||||||| | ||||||||||||||||||  ||||||||| |    
T  24508901 ccaaacatttacagtacataatatgacccttctcatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagcacccttttgccaaagg 24508802  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    |||||||| |||||| |||||||||||    
T  24508801 ttatgatcttatacacttgaattaatg 24508775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 69 - 196
Target Start/End: Complemental strand, 21937120 - 21936993
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| |||||| | | || ||||||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||| ||| |    
T  21937120 ttgttttatatcttgattgttgggaacaggttgctgcacttgaaactcgaaaagtttaatggttatgcatgtaaaactcaaagtgcatagggtttccata 21937021  T
Q  169 ctaacctttaggttcaattcctccccac 196  Q
    |||||||||||| || |||| |||||||    
T  21937020 ctaacctttaggctcgattcgtccccac 21936993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 359
Target Start/End: Complemental strand, 20752179 - 20752022
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaat 300  Q
    ||||| ||||||||||||||| |||||  |||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||| |||| ||||     
T  20752179 ccaagtatttatagtgcattagatgacctttcacatgagagaaaaca-ctcatttgacttgaatcaatgttatggttcattaagcaccattttgtcaaag 20752081  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaag 359  Q
    ||||||  |||||||| |||||| |||| ||  |||||| ||| || | ||||||||||    
T  20752080 gttatggccatatacacttgaatcaatgctaaggttcattaaacacccctttgtcaaag 20752022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 180
Target Start/End: Original strand, 21937340 - 21937445
Alignment:
Q  75 tataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacc 174  Q
    |||| |||||||| ||||||||  |||||||||||||||| |||||||||||||| | |||||| |||||||||||| |||||||||| ||| |||||||    
T  21937340 tatatcttgattgttgggaagagactgttgcacttgaaacctgaaaagtttaatggtaatgcatataaaactcaaagcgcatggggtttccatactaacc 21937439  T
Q  175 tttagg 180  Q
    ||||||    
T  21937440 tttagg 21937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 2887258 - 2887377
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| ||  |||||| || |||||||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||||  ||||    
T  2887258 ttgttgtatatcttgattgttgaaaagaagttgctgcacttgaaacctgaaaagtttaatggttatgtatgtaaaactcaaagcgcatggggttgtcaca 2887357  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||| ||||||||| ||||    
T  2887358 ctaacatttaggttcgattc 2887377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 2888980 - 2889099
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| ||  |||||| || |||||||||||  || ||||||||||| ||||| ||||||||||||||| ||||||||||  ||||    
T  2888980 ttgttgtatatcttgattgttgaaaagaagttgctgcacttgaaatctggaaagtttaatggttatgaatgtaaaactcaaagcgcatggggttgtcaca 2889079  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||| ||||||||| ||||    
T  2889080 ctaacatttaggttcgattc 2889099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 12909401 - 12909512
Alignment:
Q  77 taacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctt 176  Q
    ||||||||||| |||||||| || | ||||||| |||| ||||||  |||||  |||||||||||||  |||||| |||||||||| |||||||||||||    
T  12909401 taacttgattgttgggaagaggcggctgcacttaaaacctgaaaaaattaatcgttatgcatgtaaacttcaaagcgcatggggttgccacactaacctt 12909500  T
Q  177 taggttcaattc 188  Q
    ||||||| ||||    
T  12909501 taggttcgattc 12909512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 12934508 - 12934619
Alignment:
Q  77 taacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctt 176  Q
    ||||||||||| |||||||| || | ||||||| |||| ||||||  ||||| ||||||||||||||  |||||| |||||||||| |||||||||||||    
T  12934508 taacttgattgttgggaagaggcggctgcacttaaaacctgaaaaaattaatcattatgcatgtaaacttcaaagcgcatggggttgccacactaacctt 12934607  T
Q  177 taggttcaattc 188  Q
    || |||| ||||    
T  12934608 tatgttcgattc 12934619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 26910769 - 26910702
Alignment:
Q  91 ggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatgg 158  Q
    |||||| | ||||||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||    
T  26910769 ggaagaggttgttgcacttgaaacctgaaaagattaaggattatgcatgtaaaattcaaagtgcatgg 26910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 441
Target Start/End: Complemental strand, 11183212 - 11182989
Alignment:
Q  218 cattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacag 317  Q
    ||||||||||  ||||||||| ||||| ||| |  ||||||||||||||  | ||||||||||||| || |  |||| |||| ||||||||||||||||     
T  11183212 cattatatgagccttcacatgggagaacacacccatttgacttgaatcagtgttatggttcattaaacatccctttgtcaaaggttatgatcatatacac 11183113  T
Q  318 ttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataacttttgattctaaaatgat 417  Q
    |||||| || | ||  |||||| || ||| | |||| ||||  ||||||| ||||| ||  ||| | || || | ||| ||| |||| ||||||| ||||    
T  11183112 ttgaatcaaggctaaggttcattaagtacccctttgccaaatgttccaatgtatatgaaagatttccatgaagagttacaacatttggttctaaattgat 11183013  T
Q  418 ttcattatttcggaaatcaccaac 441  Q
    | ||||||||  ||||| ||||||    
T  11183012 tccattattttagaaatgaccaac 11182989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 21276095 - 21276176
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  21276095 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 21276176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 21936453 - 21936408
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  21936453 aacttttggttctaaagtgattccattattttggaaatcaccaaca 21936408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 21937992 - 21938028
Alignment:
Q  406 ttctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  21937992 ttctaaaatgattccattattttggaaatcaccaaca 21938028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 49784650 - 49784775
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctc-tttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | |||| ||||||||||||| ||||||||||      
T  49784650 caagcatttatagtgcattatatgactcttcacatgagagaaaaca-ctcatttgacttgaatcaatgttatgattcattaagcacccatttgccaaagc 49784748  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    ||||||||||||||| |||||| ||||    
T  49784749 ttatgatcatatacacttgaatcaatg 49784775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 183
Target Start/End: Complemental strand, 1302687 - 1302571
Alignment:
Q  67 atttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttacca 166  Q
    |||||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||    
T  1302687 atttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgcca 1302588  T
Q  167 cactaacctttaggttc 183  Q
    |||||||||||||||||    
T  1302587 cactaacctttaggttc 1302571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 4049972 - 4050108
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  4049972 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 4050071  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  4050072 tataaccatatatacttgaatcaatgtcatggttcat 4050108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 8458476 - 8458612
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  ||| |||||||| ||||  ||||||||| ||    
T  8458476 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaaccacccttttgccaaaggt 8458575  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| |||||||| ||||||    
T  8458576 tataaccatatatacttgaatcaatgttatggttcat 8458612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 10584898 - 10584762
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  10584898 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 10584799  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  10584798 tataaccatatatatttgaatcaatgtcatggttcat 10584762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 5458452 - 5458333
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  5458452 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 5458353  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  5458352 ctaacctttaggttcgattc 5458333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 6853392 - 6853273
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||||||||||| | ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  6853392 ttgttatataactagtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 6853293  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  6853292 ctaacctttaggttcgattc 6853273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 8458075 - 8458194
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  8458075 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 8458174  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  8458175 ctaacctttaggttcgattc 8458194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 8464514 - 8464633
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  8464514 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 8464613  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  8464614 ctaacctttaggttcgattc 8464633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 10591735 - 10591616
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  10591735 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 10591636  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  10591635 ctaacctttaggttcgattc 10591616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 31076842 - 31076723
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  31076842 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 31076743  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  31076742 ctaacctttaggttcgattc 31076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 33703040 - 33702921
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  33703040 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 33702941  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  33702940 ctaacctttaggttcgattc 33702921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 5481927 - 5481809
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  5481927 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 5481828  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  5481827 taacctttaggttcgattc 5481809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 1302284 - 1302148
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  1302284 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 1302185  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  1302184 tataaccatatatacttgaatcaatgtcatggttcat 1302148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Original strand, 4055106 - 4055242
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  4055106 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 4055205  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  4055206 tataaccatatatacttgaatcaatgtcatggttcat 4055242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 443
Target Start/End: Original strand, 8464914 - 8465154
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||| ||||||||| ||    
T  8464914 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgtcatgattcattaagcaccattttgccaaaggt 8465013  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcatca--aatactcatttgtcaaagattccaatatatataaataattcctataaaaaattataact 400  Q
    ||| | |||||| | |||| | ||||| || |||||| |  |||| | | |  |  ||  ||||||| ||||| |||  |||| || || | ||| ||||    
T  8465014 tataaccatatatacttgagtcaatgtcatggttcattattaataataaataat--aatgttccaatgtatatgaatggttcccatgaagagttacaact 8465111  T
Q  401 tttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    |||| ||||||| ||||| |||||||| |||||||||||||||    
T  8465112 tttggttctaaagtgattccattattttggaaatcaccaacat 8465154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 10672978 - 10672842
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  10672978 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 10672879  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  10672878 tataaccatatatacttgaatcaatgtcatggttcat 10672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 4054705 - 4054824
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| || || |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  4054705 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctggaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 4054804  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  4054805 ctaacctttaggttcgattc 4054824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 6858495 - 6858376
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| | || |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  6858495 ttgttatatatcttgtttgttgggaagaggatgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 6858396  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  6858395 ctaacctttaggttcgattc 6858376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 10586622 - 10586503
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||| |||| |||||    
T  10586622 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatgaggttgccaca 10586523  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  10586522 ctaacctttaggttcgattc 10586503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 10673378 - 10673259
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||||||||  ||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  10673378 ttgttatatattttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 10673279  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  10673278 ctaacctttaggttcgattc 10673259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 31081947 - 31081828
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| | ||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  31081947 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctaaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 31081848  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  31081847 ctaacctttaggttcgattc 31081828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 4049572 - 4049690
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||| |||||  ||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  4049572 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatatttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 4049671  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  4049672 taacctttaggttcgattc 4049690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 10678492 - 10678374
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    |||||||||  ||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  10678492 tgttatatattttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 10678393  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  10678392 taacctttaggttcgattc 10678374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 5481528 - 5481392
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  5481528 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagcacccttttgccaaaggt 5481429  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  5481428 tataaccatatatacttgaatcaatgtcatggttcat 5481392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 6852992 - 6852856
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| ||||| |||||||  ||||||||| ||    
T  6852992 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcatcaagcacccttttgccaaaggt 6852893  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  6852892 tataaccatatatacttgaatcaatgtcatggttcat 6852856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 6858095 - 6857959
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| ||||| |||||||  ||||||||| ||    
T  6858095 caagcatttatagtgcattatatgactcttcacatgagagaaatcacctctttaacttgaatcaatgccatgattcatcaagcacccttttgccaaaggt 6857996  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  6857995 tataaccatatatacttgaatcaatgtcatggttcat 6857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 10591335 - 10591199
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||| ||||| ||    
T  10591335 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttaccaaaggt 10591236  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  10591235 tataaccatatatacttgaatcaatgtcatggttcat 10591199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 29827192 - 29827312
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    ||||| |||| |||||||| ||| ||||  ||| ||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29827192 ttgttgtatatcttgattgttggaaagatactgctgcacttaaaacctgaaaagtttaatggttatgcatgtaaaactcaaagcgcatggggttaccaca 29827291  T
Q  169 ct-aacctttaggttcaattc 188  Q
    || ||||||||||||| ||||    
T  29827292 ctaaacctttaggttcgattc 29827312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 31076442 - 31076306
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  31076442 caagcatttataatgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 31076343  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  31076342 tataaccatatatacttgaatcaatgtcatggttcat 31076306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 31081547 - 31081411
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  31081547 caagcatttataatgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 31081448  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  31081447 tataaccatatatacttgaatcaatgtcatggttcat 31081411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 33702639 - 33702503
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  33702639 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 33702540  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | | |||| | |||||| ||||| || ||||||    
T  33702539 tataaccttatatacttgaatcaatgtcatggttcat 33702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 73 - 188
Target Start/End: Original strand, 33703068 - 33703183
Alignment:
Q  73 tatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaa 172  Q
    |||||| |||| ||| ||| |||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||||||    
T  33703068 tatatatcttgtttgttggaaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacactaa 33703167  T
Q  173 cctttaggttcaattc 188  Q
    ||||||||||| ||||    
T  33703168 cctttaggttcgattc 33703183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 29827567 - 29827692
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||||| | |||||||||||||||| | |||| |||||||||||||| |||||||||      
T  29827567 ccaagcatttataatgcattatatgact-ttcacatgatagaaaacacccctttgacttgaatcaatgttatgattcattaagcaccattttgccaaaga 29827665  T
Q  302 ttatgatcatatacagttgaattaatg 328  Q
    |||||| |||| ||| |||||| ||||    
T  29827666 ttatgaccatacacacttgaatcaatg 29827692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 5458051 - 5457915
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||||| |  ||| |||||||||||||  ||||||||  ||    
T  5458051 caagcatttatagtgcattatatgactcttcacatgagagaaagcacctatttaacttgaatcaatgtcatgattcattaagcacccttttgccaagggt 5457952  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  5457951 tataaccatatatacttgaatcaatgtcatggttcat 5457915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 20890824 - 20890934
Alignment:
Q  68 tttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccac 167  Q
    |||||| | ||||||||||| ||||||||  ||| ||||||| |||  | |||||||||||| ||||||||||||||||||||| | |||||||| ||||    
T  20890824 tttgttgtttaacttgattgttgggaagagactgctgcactttaaatctaaaaagtttaatggttatgcatgtaaaactcaaagcgtatggggttgccac 20890923  T
Q  168 actaaccttta 178  Q
    |||||||||||    
T  20890924 actaaccttta 20890934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 10678093 - 10677955
Alignment:
Q  203 caagcatttatagtgcattatatg--actcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaat 300  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| || || ||| ||||||||||| |  ||| |||||||||||||  |||||||||     
T  10678093 caagcatttatagtgcattatatgtgactcttcacatgaaagaaagcacctttttaacttgaatcaatgccatgattcattaagcacccttttgccaaag 10677994  T
Q  301 gttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||| | |||||| | |||||| ||||| || ||||||    
T  10677993 gttataaccatatatacttgaatcaatgtcatggttcat 10677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 18024220 - 18024168
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctcttt 255  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18024220 caagcatttatagtgcattatatgacccttcacatgagagaaaacacctcttt 18024168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 20891281 - 20891340
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatataca 316  Q
    ||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||    
T  20891281 acttgaatcaatgatatggttcattaagcaaccatttgccaaaggttatgatcatataca 20891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 328
Target Start/End: Original strand, 29827680 - 29827751
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatg 328  Q
    ||||||||||| | || ||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||    
T  29827680 acttgaatcaatgctaaggttcattaagcaccaatttgtcaaatgttataatcatatacacttgaatcaatg 29827751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 20891190 - 20891236
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaaca 248  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20891190 ccaagcatttatagtgcattatatgacccttcacatgagagaaaaca 20891236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 33703464 - 33703506
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaa 245  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  33703464 caagcatttatagtgcattatatgactcttcacatgagagaaa 33703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 49784763 - 49784845
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||||||||||| ||||||||| |||| |||||  ||||||||||||||| | |||||||| |||||| ||||| || ||||||    
T  49784763 acttgaatcaatgatatggtttattatgcacccttttgccaaatgttataaccatatacacttgaatcaatgtcatggttcat 49784845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 316
Target Start/End: Original strand, 20891354 - 20891413
Alignment:
Q  257 acttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatgatcatataca 316  Q
    ||||||||||| | ||||||||||||||||||  ||||||||| |||||| |||||||||    
T  20891354 acttgaatcaatgctatggttcattaagcacccttttgccaaaggttatggtcatataca 20891413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 269535 - 269580
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||    
T  269535 aacttttgattctaaagtgattccattattttggaaatcaccaaca 269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 3187858 - 3187773
Alignment:
Q  103 tgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    |||||||||||  |||||| |||||| || ||||| |||||| |||||||| ||||||||  || ||||||||| |||||| ||||    
T  3187858 tgcacttgaaatttgaaaaatttaataataatgcacgtaaaagtcaaagtgtatggggttgtcatactaaccttaaggttcgattc 3187773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 49784304 - 49784369
Alignment:
Q  121 agtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacactaacctttaggttcaattc 188  Q
    ||||||||||||||||||||  ||||||||| ||||||||||  || |||||| ||||||||| ||||    
T  49784304 agtttaatgattatgcatgt--aactcaaagcgcatggggttgtcaaactaacatttaggttcgattc 49784369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 443
Target Start/End: Complemental strand, 1302126 - 1302044
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    ||||||||||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| |||||| ||||||||    
T  1302126 ttccaatatatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaattaccaacat 1302044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 6852798 - 6852752
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    |||||||| ||||||| ||||| |||||||| |||||||||||||||    
T  6852798 aacttttggttctaaagtgattccattattttggaaatcaccaacat 6852752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 10584704 - 10584658
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    |||||||| ||||||| ||||| |||||||| |||||||||||||||    
T  10584704 aacttttggttctaaagtgattccattattttggaaatcaccaacat 10584658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 443
Target Start/End: Complemental strand, 33702445 - 33702399
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaacat 443  Q
    |||||||| ||||||| ||||| |||||||| |||||||||||||||    
T  33702445 aacttttggttctaaagtgattccattattttggaaatcaccaacat 33702399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 4050130 - 4050211
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  4050130 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 4050211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 4055264 - 4055345
Alignment:
Q  361 ttccaatatatataaataattcctataaaaaattataacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    ||||||| ||||| |||  |||| || || | ||| |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  4055264 ttccaatgtatatgaatggttcccatgaagagttacaacttttggttctaaagtgattccattattttggaaatcaccaaca 4055345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 5481334 - 5481289
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  5481334 aacttttggttctaaagtgattccattattttggaaatcaccaaca 5481289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 6857901 - 6857856
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  6857901 aacttttggttctaaagtgattccattattttggaaatcaccaaca 6857856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 10672784 - 10672739
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  10672784 aacttttggttctaaagtgattccattattttggaaatcaccaaca 10672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 10677897 - 10677852
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  10677897 aacttttggttctaaagtgattccattattttggaaatcaccaaca 10677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 29827840 - 29827885
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||||||||||| ||||| |||| ||| ||||||||||||||    
T  29827840 aacttttgattctaaagtgattccattcttttggaaatcaccaaca 29827885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 31076246 - 31076201
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  31076246 aacttttggttctaaagtgattccattattttggaaatcaccaaca 31076201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 31081353 - 31081308
Alignment:
Q  397 aacttttgattctaaaatgatttcattatttcggaaatcaccaaca 442  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  31081353 aacttttggttctaaagtgattccattattttggaaatcaccaaca 31081308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 18023607 - 18023560
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctcttt 255  Q
    |||||||| || |||||||||| ||||||||||||||||||| ||||||    
T  18023607 catttataatgtattatatgac-cttcacatgagagaaaacacctcttt 18023560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 2059 - 1923
Alignment:
Q  203 caagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |  ||| |||||||||||||  ||||||||| ||    
T  2059 caagcatttatagtgcattatatgactcttcacatgagagaaaacacctctttaacttgaatcaatgccatgattcattaagcacccttttgccaaaggt 1960  T
Q  303 tatgatcatatacagttgaattaatgttatcgttcat 339  Q
    ||| | |||||| | |||||| ||||| || ||||||    
T  1959 tataaccatatatacttgaatcaatgtcatggttcat 1923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 188
Target Start/End: Complemental strand, 7416 - 7298
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| |||||||| |||| |||||||||||  |  ||  ||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  7416 tgttatatatcttgtttgttgggaagaggctgctgcacttgaaatctttaatttttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 7317  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  7316 taacctttaggttcgattc 7298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 16371 - 16490
Alignment:
Q  69 ttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccaca 168  Q
    |||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| |||||    
T  16371 ttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccaca 16470  T
Q  169 ctaacctttaggttcaattc 188  Q
    ||||||||||||||| ||||    
T  16471 ctaacctttaggttcgattc 16490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 16273 - 16358
Alignment:
Q  66 tatttgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaag 151  Q
    ||||||||||||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  16273 tatttgttatatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaag 16358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 144233 - 144352
Alignment:
Q  202 ccaagcatttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatg 301  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||| | |||||||||||||| |||  ||||||||  |    
T  144233 ccaagtatttatagtgcattatatgacccttcacatgagagaaaacacccctttgacttgaatcaatgttatggttcattaagtacccttttgccaaggg 144332  T
Q  302 ttatgatcatatacagttga 321  Q
    ||||||||||| ||| ||||    
T  144333 ttatgatcatacacacttga 144352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 188
Target Start/End: Original strand, 143861 - 143979
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||| ||| |||| ||| |||||||| |||| |||||||||||| ||||| |||||||| ||| |||||||||| |||||| |||||||||| ||||||    
T  143861 tgttagatatcttgtttgttgggaagaggctgctgcacttgaaacctgaaatgtttaatgcttacgcatgtaaaattcaaagcgcatggggttgccacac 143960  T
Q  170 taacctttaggttcaattc 188  Q
    |||||||||||||| ||||    
T  143961 taacctttaggttcgattc 143979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 207 - 383
Target Start/End: Original strand, 173511 - 173687
Alignment:
Q  207 catttatagtgcattatatgactcttcacatgagagaaaacatctctttgacttgaatcaacgatatggttcattaagcaccaatttgccaaatgttatg 306  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |  ||||||||||||||| | || |||||||||| |||   |||| |||||||||||    
T  173511 catttatagcgcattatatgacccttcacatgatagaaaacacccatttgacttgaatcaatgctaaggttcattaaacactcctttgtcaaatgttatg 173610  T
Q  307 atcatatacagttgaattaatgttatcgttcatcaaatactcatttgtcaaagattccaatatatataaataattcc 383  Q
    |||||||||| |||||| |||||||  |||||| ||  || | |||| ||||| ||||||| ||||| ||| |||||    
T  173611 atcatatacacttgaatcaatgttaaggttcattaagcacccttttgccaaaggttccaatgtatatgaatgattcc 173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 170583 - 170696
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||||||| | ||| ||||||| |||||||||||  |||||||||||||| |||||||||||||||| ||||  ||||||||| ||||||    
T  170583 tgttatatatcttgattgttaggatgaagctgctgcacttgaaatctgaaaagtttaatggttatgcatgtaaaacttaaagctcatggggtttccacac 170682  T
Q  170 taacctttaggttc 183  Q
    | ||||||||||||    
T  170683 tgacctttaggttc 170696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 3910 - 4011
Alignment:
Q  70 tgttatataacttgattgatgggaagaagctgttgcacttgaaacatgaaaagtttaatgattatgcatgtaaaactcaaagtgcatggggttaccacac 169  Q
    ||||||||| |||| ||| || ||||| |||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| | |||||||| ||||||    
T  3910 tgttatatatcttgtttgttgagaagaggctgctgcacttgaaacctgaaatgtttaatgatcatgcatgtaaaactcaaagcgtatggggttgccacac 4009  T
Q  170 ta 171  Q
    ||    
T  4010 ta 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University