View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1432_high_2 (Length: 403)
Name: NF1432_high_2
Description: NF1432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1432_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 17 - 393
Target Start/End: Original strand, 32121914 - 32122290
Alignment:
| Q |
17 |
aaactcagcagaagaaattgagagttggagcaacgaacgagtttccatgttaagcagacaaacaattaagcaattcatatgaaaaagtttccttcagaat |
116 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121914 |
aaactcagcagaagaaattgagagttggagcaacaaacgagtttccacgttaagcagacaaacaattaagcaattcatatgaaaaagtttccttcagaat |
32122013 |
T |
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| Q |
117 |
tgataaaagacatgaaagttgaggagctaaaaaagaaggaatttctgatatgagttgaagcaaatatgtgctcaactaggaggactgttgaaaagattta |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32122014 |
tgataaaagacatgaaagttgaggagctaaaaaagaaggaatttctgatatgagttgaagcaaatatgtgctcaactaggaggactgttgaaaagattta |
32122113 |
T |
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| Q |
217 |
aaaaatgtacctatgactttagagccattgaaaagatttcaaaaattcgcaaggactgttttcttttaaaacgagaagcaaaaaatacattattgtagag |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32122114 |
aaaaatgtacctatgactttagagccattgaaaagatttcaaaaattcgcaaggactgttttcttttaaaacgagaagcaaaaaatacattattgtagag |
32122213 |
T |
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| Q |
317 |
ttgtgttatttaaacatcaaaatactaacactgtttatgtctatctctatctgtctcttacttttcgtctagtataa |
393 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
32122214 |
ttgtgttatttaaacatcaaaatactaacactgtttatgtctatctctatttgtctcttacttttcgtctagtataa |
32122290 |
T |
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