View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1432_low_14 (Length: 235)
Name: NF1432_low_14
Description: NF1432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1432_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 43667709 - 43667490
Alignment:
| Q |
1 |
aaagcatcatctatctgaaaattttggagggagcctctctaagaaatggtgcatagttacattacaaatgaagcacttgatgagtaataatataatctca |
100 |
Q |
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| T |
43667709 |
aaagcatcatctatctgaaaattttggagggagcatctctaagaaatggtgcatagttacattacaaatgaagcacttgatgagtaataatataatctca |
43667610 |
T |
|
| Q |
101 |
aaagtggtccaaaatgggtccatatttttacattagggtcagccacgccacatccatccacatgaatgtctgcccataaaccctttctgacaacattttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43667609 |
aaagtggtccaaaatgggtccatatttttacattagggtcagccacgccacatccatccacatgaatgtctgcccataaaccctttctgacaacattttc |
43667510 |
T |
|
| Q |
201 |
tttctttattcaattgtata |
220 |
Q |
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||||||||||||||| |||| |
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| T |
43667509 |
tttctttattcaattatata |
43667490 |
T |
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