View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14330_high_1 (Length: 311)
Name: NF14330_high_1
Description: NF14330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14330_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 31656331 - 31656506
Alignment:
| Q |
12 |
ataggcatgattctaataaaacttctagtccataaaccataattcaaataacagtaagcagaaagtgacatgatacaatctttactacatgattcgaatc |
111 |
Q |
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| T |
31656331 |
ataggcatgattctaatcaaacttctagtccataaaccataattcaaataacagtaagcagaaagtgacatgatacaatctttactgcatgattcgaatc |
31656430 |
T |
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| Q |
112 |
acgcatgaacctatttcgaatgacatgctccaaaagtttaaaaacaatgattttaacttcttaaggcacattctcc |
187 |
Q |
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| T |
31656431 |
acgcatgaacctatttcgaatggcatgctccaaaagtttaaaaacaattattttaacttcataaggcacattctcc |
31656506 |
T |
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