View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14332_low_17 (Length: 358)
Name: NF14332_low_17
Description: NF14332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14332_low_17 |
 | |
|
| [»] scaffold0425 (3 HSPs) |
| | |
|
| [»] scaffold1643 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 289; Significance: 1e-162; HSPs: 34)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 6257359 - 6257015
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
6257359 |
gccttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttgccttgcaaccta |
6257260 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
6257259 |
ggcagcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattcactcttagtgacg |
6257160 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||| |
|
|
| T |
6257159 |
attttgaaatcttcgaatcctttccagaggagagtatgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaacaaaaataaacta |
6257060 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6257059 |
caagggtcttctccacctcacttcacttgaatctctatatattga |
6257015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 6140443 - 6140099
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
||||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
6140443 |
gccttttgcactatacttattcaacaatcttaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttgccttgcaaccta |
6140344 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6140343 |
ggcagcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttcaaactcaaatctctgaaacaattcagtcttagtgatg |
6140244 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||||||| || ||||||||| |
|
|
| T |
6140243 |
attttgaaatcttggaatcctttccagaggagagtctgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaaaaaaaataaacta |
6140144 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6140143 |
caagggtcttctccacctcacttcacttgaatctctatatattga |
6140099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 6243474 - 6243130
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||| |
|
|
| T |
6243474 |
gccttttgcactacacttgttcaccaatcttaattctctcgtgttgtacgattgtccattgctggaatcatttttcgggaggcagttgccttccaaccta |
6243375 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6243374 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattcagtcttagtgatg |
6243275 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||| || |||||||| |
|
|
| T |
6243274 |
attttgaaatcttcgagtcctttccagaggagagtatgctgccatcaagtattaactctcttgatttgaaaaattgttcctgcctaaaaaaaataaactg |
6243175 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6243174 |
caagggtcttctccacctcacttcacttgaatctctatatattga |
6243130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 2 - 345
Target Start/End: Complemental strand, 6263838 - 6263495
Alignment:
| Q |
2 |
ccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctag |
101 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
6263838 |
ccttttgcactacatttgttcaccaatcttaattctctcgtgttgtacaattgtccgtggctggaatcgttttttgagaggcagttgccttccaacctaa |
6263739 |
T |
|
| Q |
102 |
gcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatga |
201 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6263738 |
gcagcctccgaatagaaagatgccgtaatttgatggctacaatagaggagtggggtttgttccaactcaaatctctgaaacaattcagtcttagtgatga |
6263639 |
T |
|
| Q |
202 |
ttttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactac |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||| | |
|
|
| T |
6263638 |
ttttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattaactcttttgagttgacaaattgtcccaacctaagaaaaataaactgc |
6263539 |
T |
|
| Q |
302 |
aagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
6263538 |
aagggtcttctccacctcacttcactcaaatctctatatattga |
6263495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 6167054 - 6166706
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
|||||||||||||||| | |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
6167054 |
gccttttgcactacacgtattcaacaatcttaattctctcgtgttgtacgattgtccattgctggaatcgttttttgggaggcagttgccttgcaaccta |
6166955 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
6166954 |
ggcagcctccggatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttcaaactcaaatctctgaaacaattaagtcttagtgatg |
6166855 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||||||||||| | || ||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6166854 |
attttgaaatcttcgcattcttgccaaaggagactatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaaaaataaacta |
6166755 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattgatgat |
349 |
Q |
| |
|
||| |||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
6166754 |
caacggtcttttccacctcacttcacttgaatctctatatattgatgat |
6166706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 13275276 - 13275620
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
13275276 |
gccttttgcactacatttgttcaccaatcttaattctctcgtgttgtacaattgtccgtggctggaatcgtttttttagaggcagttgccttccaaccta |
13275375 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
13275376 |
agcagcctccgaatagaaagatgccgtaatttgatggctacaatagaggagtggggtttgttcaaactcaaatctctgaaacaattcagtcttagtgatg |
13275475 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
13275476 |
attttgaaatctttgagtcctttccagaagagagtatgctgccatcaactattaactctcttgagttgacaaattgttcaaacctaagaaaaataaacta |
13275575 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13275576 |
caagggtcttctccacctcacttcacttgaatctctatatattga |
13275620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 345
Target Start/End: Complemental strand, 6915257 - 6914914
Alignment:
| Q |
2 |
ccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctag |
101 |
Q |
| |
|
|||||| ||||||| |||||||||||||| ||||||||| |||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
6915257 |
ccttttacactacaattgttcaccaatcttcattctctcgcgttgtatgagtgtccatggctggaatcattttttgggaggcagttgccttccaacctag |
6915158 |
T |
|
| Q |
102 |
gcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatga |
201 |
Q |
| |
|
|||||||||||||||||||||| || || |||| |||||| | ||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||| |
|
|
| T |
6915157 |
gcagcctccgaatagaaagatgtccaaacttgacggcttctagagaggagtggggtttgttccaactcaattctctaaaacaattatgtgttagtgatga |
6915058 |
T |
|
| Q |
202 |
ttttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactac |
301 |
Q |
| |
|
||| | |||||||| |||||||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6915057 |
tttgaatatcttggagtcctttccagaggagagtctgctgccatcaactattaaatctctcgagttgacaaattgttccaacctaaaaataataaactac |
6914958 |
T |
|
| Q |
302 |
aagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
6914957 |
aagggtcttctccacctcacttcgcttgaatctctatatattga |
6914914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 5 - 345
Target Start/End: Complemental strand, 6898241 - 6897901
Alignment:
| Q |
5 |
tttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaacctaggca |
104 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| |||||||||| |||| ||||||| ||| |
|
|
| T |
6898241 |
tttgcactgcacttgttcaccaatcttcattctctggtgttgtacgatagtccatggctggaatcgttttgctggaggcagttgccttgcaacctatgca |
6898142 |
T |
|
| Q |
105 |
gcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattt |
204 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||| || | ||||||||||| |
|
|
| T |
6898141 |
gcctccgaatagaaagatgtcctaaattgatggcttcgagagaggagtggggtttgttccaactcaattctctgaaacagttcagtgtaagtgatgattt |
6898042 |
T |
|
| Q |
205 |
tgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaag |
304 |
Q |
| |
|
|||||||||||| |||||||| ||| ||||| |||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
6898041 |
tgaaatcttggagtcctttccggagaagagtctgctgccatcaactatgaaatctcttgagttaacaaattgttccaacctaagaataataaactataag |
6897942 |
T |
|
| Q |
305 |
ggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
6897941 |
ggtcttctccacctcacttcacttgaatctctatatattga |
6897901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 6593225 - 6593569
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| | ||||||| || |||||||| |||||||||||| |
|
|
| T |
6593225 |
gccttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtccatggctagggtcgttttcaggcaggcagttgccttccaaccta |
6593324 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||||||| | ||||||||||||||||||||||||| | ||||||||||||||| || ||||||||| |
|
|
| T |
6593325 |
tgcagcctccgaatagaaagatgtcctaaattaatggcttcgagagaggagtggggtttgttccaactcgattctctgaaacaattcagtgttagtgatg |
6593424 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||| |||||||||| |||||||| ||||||||| |||| ||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
6593425 |
attttcaaatcttggagtcctttccggaggagagtctgcttccatcaactattaaatcctttgagttaacaaattgttccaacctaagaaaaataaacta |
6593524 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6593525 |
caagggtcttctccacctcacttcacttgaatctctatgtattga |
6593569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 345
Target Start/End: Original strand, 6723951 - 6724295
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||||| |||| |
|
|
| T |
6723951 |
gccttttgctctacacttgctcaccaatcttaattctctcgttttgtacgattgtccactgctggagtcgtttttcggcaggcagttaccttccagccta |
6724050 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||||||| | ||||||||||||||||||||||||| | ||||||||||||||| || ||||||||| |
|
|
| T |
6724051 |
tgcagcctccgaatagaaagatgtcctaaattaatggcttcgagagaggagtggggtttgttccaactcgattctctgaaacaattcagtgttagtgatg |
6724150 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
||||| ||||||| || |||||||| ||||||||| |||| ||||||| ||||| || ||||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
6724151 |
attttcaaatcttagagtcctttccggaggagagtctgcttccatcaactattaaatcctttgagttaacaaattgttccaacctaagaaaaataaacta |
6724250 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6724251 |
caagggtcttctccacctcacttcacttgaatctctatgtattga |
6724295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 345
Target Start/End: Complemental strand, 6880673 - 6880329
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
||||||| |||| ||||||||||||||||| ||||||||| |||||||||| | |||||||||||| || |||| |||||||||||| |||||||||||| |
|
|
| T |
6880673 |
gccttttccactgcacttgttcaccaatcttaattctctcatgttgtacgactatccatggctggagtcattttctgggaggcagttgccttccaaccta |
6880574 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
| ||||||| |||| ||| ||| ||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| || || |||||| |
|
|
| T |
6880573 |
tgtagcctccaaataaaaaaatgtcctaagttgatggcttcgagagaggagtggggtttgttccaactcaattctctgaaacaattcagtgttggtgatg |
6880474 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
|||| ||||||||||| |||||||| ||||||||| |||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
6880473 |
atttggaaatcttggagtcctttccggaggagagtctgctgccatcaactatgaaatctcttgagttaacaaattgttccaacctaagaataataaacta |
6880374 |
T |
|
| Q |
301 |
caagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||||||| | || |||||||||||| ||| |||||| |
|
|
| T |
6880373 |
caagggtcttctccacatgacctcacttgaatctctatgtattga |
6880329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 310
Target Start/End: Complemental strand, 7748159 - 7747850
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttccaaccta |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||| |||| ||||||| ||| |||||||||| |||| ||||| ||||||||| | || ||||| ||| |
|
|
| T |
7748159 |
gccttttgcactgcacttgttcaccaatcttcattttctcatgttgtatgatagtccatggctagaattgttttccgggaggcagctgccctccaatcta |
7748060 |
T |
|
| Q |
101 |
ggcagcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatg |
200 |
Q |
| |
|
||||||||||| |||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |
|
|
| T |
7748059 |
tgcagcctccgagtagaaagatgtcctaaattgatggcttcgagagaggagtggggtttgttccaactcaaatctctaaaacaattatgtgttagtgatg |
7747960 |
T |
|
| Q |
201 |
attttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaacta |
300 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| |||||||||||| |||||| ||||||||||| | |||||||||||||||||||| ||||||||| |
|
|
| T |
7747959 |
attttgaaatcttggagtcctttccggaggagagtctgctgccatcaactattacatctcttgagttaaaaaattgttccaacctaagaagaataaacta |
7747860 |
T |
|
| Q |
301 |
caagggtctt |
310 |
Q |
| |
|
|||||||||| |
|
|
| T |
7747859 |
caagggtctt |
7747850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 136 - 345
Target Start/End: Complemental strand, 6236069 - 6235860
Alignment:
| Q |
136 |
ggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagt |
235 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||| | |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6236069 |
ggcttcgagagaggagtggggtttgttccaactcaaatctttaaaacaattgagtgttagtgatgattttgaaatcttggaatcctttccagaggagagt |
6235970 |
T |
|
| Q |
236 |
atgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctcacttcacttgaatctt |
335 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6235969 |
atgctgccatcaactattaactctcttgagttgacaaattgttccaacctaagaaaaatcaactacaagggtcttctccacctcacttcacttgaatctc |
6235870 |
T |
|
| Q |
336 |
tatatattga |
345 |
Q |
| |
|
|||||||||| |
|
|
| T |
6235869 |
tatatattga |
6235860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6851150 - 6851244
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgttgtacgattgtccatggctggaatcgttttttgggaggcagttaccttcca |
95 |
Q |
| |
|
||||||||||| ||| ||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
6851150 |
gccttttgcaccacaattgttcaacaatcttgattctcttgttttgtacgattgtccatggctggaatcgttttttgggaggcagttacattcca |
6851244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 6941952 - 6941777
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
|||||||||||||||||||||||||| || || | |||||| | |||||||||| ||||||| |||| ||||| |||||||||| | |||||||| |
|
|
| T |
6941952 |
agaggagtggggtttgttccaactcagttccttgttagaattctctgttagtgatgagtttgaaaatgtggagtccttcccagaggagaatctgctgcca |
6941853 |
T |
|
| Q |
245 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
||||| |||| |||| | |||| ||||||||| || ||||||||||| ||| | |||||| |||||||||||| |
|
|
| T |
6941852 |
ccaagtcttactgatcttaatttgagaaattgttcaaagctaagaataatgaacaaaaagggttttctccacctca |
6941777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 6481986 - 6482087
Alignment:
| Q |
132 |
tgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagagga |
231 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||||||| ||||||||| | || | |||||||||| ||||||| | ||||||||||||||||||| |
|
|
| T |
6481986 |
tgattgcttcaagagaagagtggggtttgttccaactcaattctctgaaagagtttagagttagtgatgagtttgaaaacgtggaatcctttccagagga |
6482085 |
T |
|
| Q |
232 |
ga |
233 |
Q |
| |
|
|| |
|
|
| T |
6482086 |
ga |
6482087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 320
Target Start/End: Complemental strand, 8469574 - 8469401
Alignment:
| Q |
147 |
aggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatc |
246 |
Q |
| |
|
||||||||||||||||| |||||| || ||||| ||||| | |||| ||||| ||||||| | | || ||||| |||||||||||| |||||||| | |
|
|
| T |
8469574 |
aggagtggggtttgttcagactcaattccttgaaatcattctttgttagcgatgagtttgaaaacgtagagtccttcccagaggagagtctgctgccacc |
8469475 |
T |
|
| Q |
247 |
aagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
|| | |||| | |||| | |||| |||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
8469474 |
aactcttacgtatcttaatttgaataattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
8469401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 320
Target Start/End: Complemental strand, 7585887 - 7585712
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| | ||| || |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
7585887 |
agagcagtggggtttgttccaactcaattctctgagagctttcggtgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
7585788 |
T |
|
| Q |
245 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
||| |||| || ||| ||| | |||||||| || ||||||||||| ||| | |||||| |||||||||||| |
|
|
| T |
7585787 |
ccaactattcactttctctggttctctaattgttcaaagctaagaataatgaacaaaaagggttttctccacctca |
7585712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 318
Target Start/End: Original strand, 4390932 - 4391102
Alignment:
| Q |
148 |
ggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatca |
247 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||| | ||| | || ||||||| ||||||| |||| ||||| |||||||||||| |||| ||| |
|
|
| T |
4390932 |
ggagtggggtttgttccaactcaattctctaaaagatttcattgttggtgatgactttgaaaatgtggagtccttcccagaggagagtctgctaccagat |
4391031 |
T |
|
| Q |
248 |
agtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacct |
318 |
Q |
| |
|
| |||| ||||||| |||| | | ||||| || ||||||||||||||| |||||||||||||||||| |
|
|
| T |
4391032 |
aatattgactctcttagcttgagagaatgttcaaagttaagaataataaactgcaagggtcttctccacct |
4391102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 8570959 - 8571140
Alignment:
| Q |
139 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
238 |
Q |
| |
|
||||| |||||| ||||||||||||||||| || ||||||||| ||| | || |||||| ||| ||| |||||||||| |||||||||||| || |
|
|
| T |
8570959 |
ttcaagagaggattggggtttgttccaacttaactctctgaaatcatttagagttgttgatgactttaaaaatgtggaatccttcccagaggagagtttg |
8571058 |
T |
|
| Q |
239 |
ctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
|||||| ||| | || | ||||| ||| |||||||| || ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
8571059 |
ctgccaccaactcttcacactctttgtttgtataattgttcaaagctaagaataatgaactacaagggacttctccacctca |
8571140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 312
Target Start/End: Complemental strand, 5278719 - 5278511
Alignment:
| Q |
104 |
agcctccgaatagaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
203 |
Q |
| |
|
|||||||||||| | | ||||||| | |||| || |||| | ||||||||||||||||| |||| || ||||||||| | ||| | |||||||||| | |
|
|
| T |
5278719 |
agcctccgaataaacaaatgccctgaactgattgcatcaagaaaggagtggggtttgttcgaactaaattctctgaaagagttcagagttagtgatgact |
5278620 |
T |
|
| Q |
204 |
ttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaa |
303 |
Q |
| |
|
|||||| | |||| ||||| || ||||||| | | ||||| ||| | ||| | || || | ||| ||||||||| || ||||||||||| |||| ||| |
|
|
| T |
5278619 |
ttgaaagcatggactccttcccggaggagaatctactgcccccaactcttaacactattcatttggaaaattgttcaaagctaagaataatcaactccaa |
5278520 |
T |
|
| Q |
304 |
gggtcttct |
312 |
Q |
| |
|
||||||||| |
|
|
| T |
5278519 |
gggtcttct |
5278511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 312
Target Start/End: Complemental strand, 5261951 - 5261784
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||| ||||| ||||||| || ||||| | |||| || || || ||||||| | | |||||| |
|
|
| T |
5261951 |
agaggagtggggtttgttcgaactcaattctctgaaagaattcaaagttagtgacgactttgagaatgtggagtctttcccggaggagaatctactgcca |
5261852 |
T |
|
| Q |
245 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttct |
312 |
Q |
| |
|
||| | ||| |||||| ||| ||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
5261851 |
ccaactcttaagtctcttcgtttggaaaattgttcaaagctaagaataataaactacaagggtcttct |
5261784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 320
Target Start/End: Original strand, 6450864 - 6450986
Alignment:
| Q |
198 |
atgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaa |
297 |
Q |
| |
|
|||| ||||||| | |||| ||||| || ||||||| | |||||||| ||| | || || | ||| | |||| |||||||| |||||||||||||| || |
|
|
| T |
6450864 |
atgactttgaaaacgtggagtccttccccgaggagaatctgctgccaccaactcttcccacccttcaattgaataattgttcaaacctaagaataatgaa |
6450963 |
T |
|
| Q |
298 |
ctacaagggtcttctccacctca |
320 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
6450964 |
ctacaagggttttctccacctca |
6450986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 6782339 - 6782520
Alignment:
| Q |
139 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
238 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| || ||||| |||| | ||| |||||| ||||||| | |||| ||||| |||||||||| | | |
|
|
| T |
6782339 |
ttcaagagaggagtggggtttgttccaactcaattccttgaaatctttctttgttactgatgagtttgaaaacgtggagtccttcccagaggagaatcta |
6782438 |
T |
|
| Q |
239 |
ctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
|| ||||||| || ||||| | || ||||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
6782439 |
ctaccatcaacccttgagactctttatgtggaaaattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
6782520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 6945290 - 6945185
Alignment:
| Q |
139 |
ttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatg |
238 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||| | ||||| | |||||||||| ||||||| | |||| || || |||||||||| | || |
|
|
| T |
6945290 |
ttcaagagaggagtggggtttgttccaactcaattctctcattgaattcgttgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctg |
6945191 |
T |
|
| Q |
239 |
ctgcca |
244 |
Q |
| |
|
|||||| |
|
|
| T |
6945190 |
ctgcca |
6945185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 6730866 - 6730914
Alignment:
| Q |
272 |
aattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
6730866 |
aattgttcaaacctaagaataatgaactacaagggttttctccacctca |
6730914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 152 - 320
Target Start/End: Complemental strand, 8587932 - 8587764
Alignment:
| Q |
152 |
tggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagta |
251 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| ||| |||||||||| ||||||| | |||| ||||| |||||||||| | | |||||| ||| | |
|
|
| T |
8587932 |
tggggtttgttccaactcaattctctaaaatctttcaaagttagtgatgagtttgaaaacgtggagtccttcccagaggagaatcttctgccaccaactc |
8587833 |
T |
|
| Q |
252 |
ttacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
|| ||| || |||| |||||||| || |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
8587832 |
ttgagtctatttggttgtttaattgttcaaagctaagaataataaactgcaaaggtcttctccacctca |
8587764 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 320
Target Start/End: Original strand, 6523499 - 6523674
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
|||||||||||| |||||||||||||| || ||| | | |||| | |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
6523499 |
agaggagtgggggttgttccaactcaattccttgagatatttctttgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
6523598 |
T |
|
| Q |
245 |
tcaagtattacctctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
||| | | | ||||||| || ||||||| || ||||||||||| ||| |||||||| |||||||||||| |
|
|
| T |
6523599 |
ccaactctggacactcttgatttatatgattgttcaaagctaagaataatgaacaacaagggttttctccacctca |
6523674 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 6841584 - 6841683
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||| ||| || |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
6841584 |
agaggagtggggtttgttccaactcaattccttgaaatggttcagtgttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
6841683 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 5265955 - 5265922
Alignment:
| Q |
285 |
taagaataataaactacaagggtcttctccacct |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
5265955 |
taagaataataaactacaagggtcttctccacct |
5265922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 5296771 - 5296663
Alignment:
| Q |
132 |
tgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagagga |
231 |
Q |
| |
|
|||| ||||| | |||| ||||||| |||||||||||||| ||||||||| ||||| | |||| ||||| ||||||| | |||| || || || ||||| |
|
|
| T |
5296771 |
tgatagcttcgagagagaagtgggggttgttccaactcaattctctgaaagaattcattgttagcgatgactttgaaaacatggagtcattcccggagga |
5296672 |
T |
|
| Q |
232 |
gagtatgct |
240 |
Q |
| |
|
|||| |||| |
|
|
| T |
5296671 |
gagtttgct |
5296663 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 8452610 - 8452487
Alignment:
| Q |
195 |
gtgatgattttgaaatcttggaatcctttccagaggagagtatgctgccatcaagtattacctctcttgagttgacaaattgttccaacctaagaataat |
294 |
Q |
| |
|
||||||||||||||| | |||| ||||||||| |||||||| |||||||| ||| | || | | |||| | |||| || ||||| || || |||||||| |
|
|
| T |
8452610 |
gtgatgattttgaaaacgtggagtcctttccaaaggagagtctgctgccaccaactctttcgtatcttaatttgaataactgttcaaagctcagaataat |
8452511 |
T |
|
| Q |
295 |
aaactacaagggtcttctccacct |
318 |
Q |
| |
|
||| || ||||| |||||||||| |
|
|
| T |
8452510 |
gaacaacgagggttttctccacct |
8452487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 318
Target Start/End: Complemental strand, 5248050 - 5248017
Alignment:
| Q |
285 |
taagaataataaactacaagggtcttctccacct |
318 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
5248050 |
taagaataataaacttcaagggtcttctccacct |
5248017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 6482129 - 6482173
Alignment:
| Q |
275 |
tgttccaacctaagaataataaactacaagggtcttctccacctc |
319 |
Q |
| |
|
||||| || ||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
6482129 |
tgttcaaagctaagaataatgaactacaagggttttctccacctc |
6482173 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425 (Bit Score: 64; Significance: 6e-28; HSPs: 3)
Name: scaffold0425
Description:
Target: scaffold0425; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 13521 - 13608
Alignment:
| Q |
116 |
gaaagatgccctaatttgatggcttcaatagaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgatt |
203 |
Q |
| |
|
|||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |
|
|
| T |
13521 |
gaaagatgtcctaaattgatggcttcaagagaggagtggggtttgttccaactcaattctctgaaacaattcagtgttagtgatgatt |
13608 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 13621 - 13708
Alignment:
| Q |
258 |
ctcttgagttgacaaattgttccaacctaagaataataaactacaagggtcttctccacctcacttcacttgaatctttatatattga |
345 |
Q |
| |
|
|||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
13621 |
ctcttgagttgaaaaattgttccaatctaggaataataaactacaagggtcttctctacctcactttgcttgaatctctatatattga |
13708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0425; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9635 - 9707
Alignment:
| Q |
1 |
gccttttgcactacacttgttcaccaatctaaattctctcgtgt-tgtacgattgtccatggctggaatcgttt |
73 |
Q |
| |
|
|||||| | ||||||||||||||||||||| |||| ||| || | |||||||||||||| ||||||||||||| |
|
|
| T |
9635 |
gcctttggaactacacttgttcaccaatcttaattatct-gtatctgtacgattgtccagagctggaatcgttt |
9707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 320
Target Start/End: Original strand, 6575469 - 6575514
Alignment:
| Q |
275 |
tgttccaacctaagaataataaactacaagggtcttctccacctca |
320 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
6575469 |
tgttcaaagctaagaataatgaactacaagggtcttctccacctca |
6575514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1643 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1643
Description:
Target: scaffold1643; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 186 - 87
Alignment:
| Q |
145 |
agaggagtggggtttgttccaactcaaatctctgaaacaattctgtcttagtgatgattttgaaatcttggaatcctttccagaggagagtatgctgcca |
244 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| | ||||| |||||||||| ||||||| | |||| || || |||||||||| | |||||||| |
|
|
| T |
186 |
agaggagtggagtttgttccaactcaattctctgtatcaatttgaagttagtgatgagtttgaaaacgtggagtcgttcccagaggagaatctgctgcca |
87 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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