View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14333_high_2 (Length: 201)
Name: NF14333_high_2
Description: NF14333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14333_high_2 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 48868803 - 48868630
Alignment:
| Q |
13 |
gagaagaagggccgtcaacgaaaccatatgaggcatatatgatgagcaacaagatggagtgtaaaagtagctgtatctctgatgatatttgttcactcga |
112 |
Q |
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| T |
48868803 |
gagaagaagggccgtcaacgaaaccatatgaggcatatatgatgagcaacaagatggagtgtaaaagtagctgtatctctgatgatatttgttcactcga |
48868704 |
T |
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| Q |
113 |
agacgtcatcaaagtcatgaccaaacaggtaatataatttatgcaatctgatgaagttcttatctgagttttct |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48868703 |
agacgtcatcaaagtcatgaccaaacaggtaatataatttatgcaatctgatgaagttcttatctgagttttct |
48868630 |
T |
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