View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14333_low_2 (Length: 250)
Name: NF14333_low_2
Description: NF14333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14333_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3603225 - 3603455
Alignment:
| Q |
1 |
ccatgcacacccttaccaatggagagaacctatggaaaactatatnnnnnnnnnnccacttgatcatatatcatnnnnnnntttaaaaatgtaattttat |
100 |
Q |
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| T |
3603225 |
ccatgcacacccttaccaatggagagaacctatggaaaactatataaaaaaaaa-caacttgatcatatatcataaaaaaatttaaaaatgtaattttat |
3603323 |
T |
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| Q |
101 |
ataatgtgatgagatgatatggtgatgattgaatgtttatacaaaacttgttacaccatcatcttgagaattagcacttgcaatttgatacattcatatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| | |
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| T |
3603324 |
ataatgtgatgagatgatatggtgatgattgaatgtttatacaaaacttgttacaccatcattttgagaatcagcacatgcaatttgatacattcatacc |
3603423 |
T |
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| Q |
201 |
agctaggaaaagcatgtctatatatggcttcc |
232 |
Q |
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||||||||||||||||| |||||||||||||| |
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| T |
3603424 |
agctaggaaaagcatgtttatatatggcttcc |
3603455 |
T |
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